lineage | Count |
---|---|
lineage1.1.3.2 | 1 |
lineage3 | 13 |
lineage1.2.2.2 | 2 |
lineage4.6.2.2 | 3 |
lineage4.8 | 5 |
lineage2.2.2 | 1 |
lineage1.2.1.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3;lineage4.8 | 1 |
lineage1.1.2 | 3 |
lineage4.2.2.2 | 1 |
lineage3.1 | 2 |
lineage4.3.2 | 1 |
lineage4.4.1.2;lineage4.8 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 38 |
ID | Drug resistance | Lineage | Country iso2 | SRR12882233 | Sensitive | lineage1.1.3.2 | None | ERR2514295 | HR-TB | lineage3 | gb | SRR22251818 | Sensitive | lineage1.2.2.2 | None | SRR2100031 | HR-TB | lineage3 | None | ERR4872241 | MDR-TB | lineage4.6.2.2 | None | ERR4798925 | Sensitive | lineage4.8 | in | ERR13291055 | RR-TB | lineage2.2.2 | None | SRR2101258 | HR-TB | lineage3 | None | SRR7069469 | Sensitive | lineage3 | None | ERR1034682 | MDR-TB | lineage4.8 | co | ERR4798392 | Pre-XDR-TB | lineage4.8 | in | SRR27450404 | Sensitive | lineage1.2.1.2 | None | ERR4799073 | Pre-XDR-TB | lineage4.8 | in | ERR11081256 | MDR-TB | lineage1.2.1.2.1 | None | ERR4815523 | HR-TB | lineage3 | None | ERR9119633 | MDR-TB | lineage4.6.2.2 | None | ERR386853 | HR-TB | lineage3 | None | ERR351921 | HR-TB | lineage3 | None | ERR4797457 | XDR-TB | lineage4.8 | in | ERR400549 | Sensitive | lineage3 | gb | SRR7069472 | HR-TB | lineage3 | None | SRR25827582 | XDR-TB | lineage3;lineage4.8 | None | ERR4796642 | Sensitive | lineage1.1.2 | in | ERR4796545 | MDR-TB | lineage4.2.2.2 | in | ERR2512907 | HR-TB | lineage3 | gb | ERR4797687 | MDR-TB | lineage3.1 | in | ERR386998 | HR-TB | lineage3 | None | SRR18213847 | HR-TB | lineage3 | None | SRR12931722 | Sensitive | lineage4.3.2 | None | SRR6964633 | MDR-TB | lineage1.1.2 | None | ERR4814316 | HR-TB | lineage3 | gb | ERR10465953 | Sensitive | lineage4.6.2.2 | None | SRR25827584 | Pre-XDR-TB | lineage4.4.1.2;lineage4.8 | None | ERR4797857 | MDR-TB | lineage1.2.2.2 | in | ERR4796567 | Sensitive | lineage1.1.3.1 | in | ERR11466585 | Sensitive | lineage4.1.1.3 | None | SRR8380896 | MDR-TB | lineage1.1.2 | in | ERR4797514 | MDR-TB | lineage3.1 | in |
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