Run ID: ERR4028197
Sample name:
Date: 01-04-2023 04:20:36
Number of reads: 1799157
Percentage reads mapped: 99.96
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
fbiC | 1304030 | p.Pro367His | missense_variant | 0.11 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
PPE35 | 2170298 | c.315A>G | synonymous_variant | 0.14 |
PPE35 | 2170385 | c.228G>T | synonymous_variant | 0.18 |
folC | 2747195 | p.Asp135Gly | missense_variant | 0.97 |
embC | 4242417 | p.Gly852Asp | missense_variant | 0.18 |