lineage | Count |
---|---|
lineage4.8 | 3 |
lineage2.2.1.1 | 40 |
lineage4.9 | 1 |
lineage3 | 2 |
lineage4.6.1;lineage2.2.1.1 | 4 |
lineage2.2.1 | 2 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR11083011 | MDR-TB | lineage4.8 | None | ERR2510870 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR2510305 | MDR-TB | lineage2.2.1.1 | pk | ERR2510871 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR2510252 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR4423534 | MDR-TB | lineage2.2.1.1 | None | ERR1213887 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR5535861 | MDR-TB | lineage2.2.1.1 | None | SRR5535924 | MDR-TB | lineage2.2.1.1 | None | ERR4822301 | MDR-TB | lineage4.8 | None | SRR5817465 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3077945 | MDR-TB | lineage2.2.1.1 | None | ERR3148044 | MDR-TB | lineage4.8 | None | ERR4831012 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR3132127 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10225494 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4028197 | Sensitive | lineage4.9 | None | ERR405221 | MDR-TB | lineage2.2.1.1 | None | ERR4423650 | MDR-TB | lineage2.2.1.1 | None | ERR4423652 | MDR-TB | lineage2.2.1.1 | None | ERR4423659 | MDR-TB | lineage2.2.1.1 | None | ERR4423658 | MDR-TB | lineage2.2.1.1 | None | ERR4423651 | MDR-TB | lineage2.2.1.1 | None | ERR4423653 | MDR-TB | lineage2.2.1.1 | None | ERR4423773 | MDR-TB | lineage2.2.1.1 | None | ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4423774 | MDR-TB | lineage2.2.1.1 | None | ERR4796370 | MDR-TB | lineage3 | in | ERR4796449 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798295 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798428 | MDR-TB | lineage2.2.1.1 | in | ERR4799231 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796398 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798155 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799352 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799862 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799516 | MDR-TB | lineage2.2.1.1 | in | ERR4799658 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799743 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800081 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799999 | MDR-TB | lineage2.2.1.1 | in | ERR4800228 | Pre-XDR-TB | lineage3 | in | ERR4800245 | MDR-TB | lineage2.2.1.1 | None | SRR1173873 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR1173245 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR1173415 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR1173866 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR16156798 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801852 | Other | lineage4.2.1 | None | SRR16156799 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014750 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22424757 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22175261 | Pre-XDR-TB | lineage2.2.1.1 | None |
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