Run ID: ERR9117805
Sample name:
Date: 2024-04-15T19:14:15.475191
Number of reads: 868431
Percentage reads mapped: 49.91
Median coverage: 26.0
Strain: lineage4.3.2
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage4.3 | Euro-American (LAM) | None | 0.75 |
lineage4.3.2 | Euro-American (LAM) | None | 0.94 |
lineage4 | Euro-American | None | 0.97 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | ||||
pyrazinamide | ||||
streptomycin | rrs | n.799C>T | Uncertain significance | Mutation from literature |
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | fgd1 | c.301_303delGTTinsAC | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
fbiC | c.859_861delATCinsGG | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
fgd1 | 491083 | c.301_303delGTTinsAC | frameshift_variant&missense_variant | 0.26 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1303789 | c.859_861delATCinsGG | frameshift_variant&missense_variant | 0.18 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 645 | c.645A>C | synonymous_variant | 0.22 | isoniazid | Not assoc w R - Interim |
dnaA | 649 | c.649C>T | synonymous_variant | 0.23 | isoniazid | Not assoc w R - Interim |
dnaA | 654 | c.654A>G | synonymous_variant | 0.22 | isoniazid | |
dnaA | 660 | c.660G>C | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 663 | c.663A>C | synonymous_variant | 0.25 | isoniazid | |
dnaA | 669 | c.669C>T | synonymous_variant | 0.27 | isoniazid | |
dnaA | 672 | c.672T>C | synonymous_variant | 0.26 | isoniazid | Not assoc w R - Interim |
dnaA | 678 | c.678A>G | synonymous_variant | 0.27 | isoniazid | Not assoc w R - Interim |
dnaA | 681 | c.681G>C | synonymous_variant | 0.27 | isoniazid | |
dnaA | 693 | c.693A>G | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 705 | c.705A>G | synonymous_variant | 0.23 | isoniazid | |
dnaA | 708 | c.708T>C | synonymous_variant | 0.23 | isoniazid | |
dnaA | 720 | c.720G>A | synonymous_variant | 0.22 | isoniazid | |
dnaA | 741 | c.741T>C | synonymous_variant | 0.26 | isoniazid | Not assoc w R - Interim |
dnaA | 750 | c.750C>G | synonymous_variant | 0.18 | isoniazid | |
dnaA | 756 | c.756T>C | synonymous_variant | 0.19 | isoniazid | |
dnaA | 837 | c.837A>G | synonymous_variant | 0.24 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.24 | isoniazid | |
dnaA | 846 | c.846T>C | synonymous_variant | 0.21 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 0.22 | isoniazid | |
dnaA | 876 | c.876C>G | synonymous_variant | 0.18 | isoniazid | |
dnaA | 877 | c.877T>C | synonymous_variant | 0.18 | isoniazid | |
dnaA | 882 | c.882C>T | synonymous_variant | 0.19 | isoniazid | |
dnaA | 885 | c.885T>C | synonymous_variant | 0.22 | isoniazid | |
dnaA | 897 | c.897A>G | synonymous_variant | 0.19 | isoniazid | |
dnaA | 909 | c.909A>C | synonymous_variant | 0.21 | isoniazid | Not assoc w R - Interim |
dnaA | 912 | c.912T>G | synonymous_variant | 0.21 | isoniazid | |
dnaA | 918 | c.918C>G | synonymous_variant | 0.2 | isoniazid | |
dnaA | 921 | c.921A>G | synonymous_variant | 0.2 | isoniazid | Not assoc w R - Interim |
dnaA | 942 | c.942C>G | synonymous_variant | 0.23 | isoniazid | |
dnaA | 945 | c.945G>A | synonymous_variant | 0.23 | isoniazid | |
dnaA | 955 | c.955A>C | synonymous_variant | 0.23 | isoniazid | |
dnaA | 960 | c.960C>A | synonymous_variant | 0.22 | isoniazid | |
dnaA | 963 | c.963C>G | synonymous_variant | 0.23 | isoniazid | |
dnaA | 966 | c.966T>C | synonymous_variant | 0.23 | isoniazid | |
dnaA | 969 | c.969G>A | synonymous_variant | 0.23 | isoniazid | |
dnaA | 975 | c.975G>T | synonymous_variant | 0.23 | isoniazid | |
dnaA | 984 | c.984T>C | synonymous_variant | 0.23 | isoniazid | Not assoc w R - Interim |
dnaA | 993 | c.993A>G | synonymous_variant | 0.25 | isoniazid | |
dnaA | 996 | c.996A>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 999 | c.999C>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1003 | c.1003C>T | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1008 | c.1008G>A | synonymous_variant | 0.28 | isoniazid | Not assoc w R - Interim |
dnaA | 1014 | c.1014C>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1024 | c.1024T>C | synonymous_variant | 0.32 | isoniazid | |
dnaA | 1038 | c.1038A>T | synonymous_variant | 0.3 | isoniazid | |
dnaA | 1041 | c.1041G>A | synonymous_variant | 0.32 | isoniazid | |
dnaA | 1047 | c.1047A>G | synonymous_variant | 0.32 | isoniazid | |
dnaA | 1068 | c.1068T>C | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1092 | c.1092T>C | synonymous_variant | 0.38 | isoniazid | Not assoc w R - Interim |
dnaA | 1098 | c.1098A>G | synonymous_variant | 0.37 | isoniazid | |
dnaA | 1104 | c.1104T>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 1110 | c.1110T>C | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1113 | c.1113A>G | synonymous_variant | 0.38 | isoniazid | |
dnaA | 1125 | c.1125G>C | synonymous_variant | 0.42 | isoniazid | |
dnaA | 1129 | p.Ile377Leu | missense_variant | 0.59 | isoniazid | Uncertain significance |
dnaA | 1137 | c.1137C>G | synonymous_variant | 0.41 | isoniazid | |
dnaA | 1143 | c.1143G>C | synonymous_variant | 0.34 | isoniazid | |
dnaA | 1152 | c.1152A>G | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1153 | c.1153T>C | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1161 | c.1161A>G | synonymous_variant | 0.4 | isoniazid | |
dnaA | 1164 | c.1164A>C | synonymous_variant | 0.43 | isoniazid | |
dnaA | 1167 | c.1167A>G | synonymous_variant | 0.41 | isoniazid | Not assoc w R - Interim |
dnaA | 1176 | c.1176A>G | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1188 | c.1188G>A | synonymous_variant | 0.35 | isoniazid | |
dnaA | 1191 | c.1191T>C | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1230 | c.1230A>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1236 | c.1236C>T | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1242 | c.1242G>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 1245 | c.1245G>C | synonymous_variant | 0.26 | isoniazid | Not assoc w R - Interim |
dnaA | 1254 | c.1254T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 1278 | c.1278T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 1284 | c.1284C>G | synonymous_variant | 0.21 | isoniazid | |
dnaA | 1287 | c.1287A>G | synonymous_variant | 0.2 | isoniazid | |
dnaA | 1290 | c.1290G>A | synonymous_variant | 0.2 | isoniazid | |
dnaA | 1293 | c.1293T>C | synonymous_variant | 0.2 | isoniazid | |
dnaA | 1299 | c.1299G>C | synonymous_variant | 0.2 | isoniazid | Not assoc w R - Interim |
dnaA | 1311 | c.1311C>G | synonymous_variant | 0.19 | isoniazid | |
dnaA | 1317 | c.1317A>G | synonymous_variant | 0.19 | isoniazid | |
dnaA | 1320 | c.1320G>C | synonymous_variant | 0.2 | isoniazid | |
dnaA | 1323 | c.1323C>T | synonymous_variant | 0.2 | isoniazid | Not assoc w R - Interim |
dnaA | 1332 | c.1332A>C | synonymous_variant | 0.23 | isoniazid | Not assoc w R - Interim |
dnaA | 1338 | c.1338T>C | synonymous_variant | 0.23 | isoniazid | |
dnaA | 1353 | c.1353T>C | synonymous_variant | 0.25 | isoniazid | |
gyrB | 6238 | c.999G>A | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6250 | c.1011A>G | synonymous_variant | 0.25 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6256 | c.1017G>A | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6265 | c.1026C>T | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6268 | c.1029C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6289 | c.1050C>T | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6292 | c.1053G>C | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6304 | c.-998C>G | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6307 | c.1068T>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6319 | c.1080G>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 6361 | c.-941G>A | upstream_gene_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6362 | c.-940T>C | upstream_gene_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6655 | c.-647T>C | upstream_gene_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6670 | c.-632G>C | upstream_gene_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6673 | c.-629A>C | upstream_gene_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6676 | c.-626T>G | upstream_gene_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6728 | c.1489_1491delCTAinsTG | frameshift_variant&stop_gained | 0.42 | levofloxacin | Uncertain significance |
moxifloxacin | ||||||
gyrA | 6742 | c.-560A>G | upstream_gene_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6745 | c.1506T>G | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6751 | c.-551G>C | upstream_gene_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6763 | c.1524G>C | synonymous_variant | 0.43 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6775 | c.1536G>C | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6793 | c.1554T>C | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6797 | p.Gly520Thr | missense_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6949 | c.-353A>G | upstream_gene_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6952 | c.1713C>G | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6967 | c.-335T>C | upstream_gene_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7099 | c.-203G>A | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7406 | c.105G>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7427 | c.126G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7442 | c.141G>C | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7451 | c.150C>G | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7457 | c.156T>C | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7475 | c.174A>G | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7484 | c.183T>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7514 | c.213C>G | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7523 | c.222C>A | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7532 | c.231T>C | synonymous_variant | 0.42 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.42 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7562 | c.261C>T | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7571 | c.270G>C | synonymous_variant | 0.34 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7595 | c.294C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7601 | c.300C>G | synonymous_variant | 0.26 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>G | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7622 | c.321C>T | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7625 | c.324G>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7631 | c.330G>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7637 | c.336C>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7658 | c.357A>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7664 | c.363T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7670 | c.369A>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7676 | c.375G>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7683 | c.382_384delAGGinsCC | frameshift_variant&missense_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7694 | c.393A>G | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7697 | c.396C>A | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7710 | c.409_411delTTGinsCC | frameshift_variant&missense_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7715 | c.414G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7721 | c.420G>A | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7725 | c.424C>T | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7728 | c.427_429delAGGinsCT | frameshift_variant&missense_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7784 | c.483A>G | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7793 | c.492G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7796 | c.495G>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 0.26 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8111 | c.810G>C | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8129 | c.828T>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8135 | c.834C>G | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8156 | c.855T>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8168 | c.867A>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8177 | c.876A>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8189 | c.888G>C | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8198 | c.897T>C | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8207 | c.906T>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8219 | c.918T>C | synonymous_variant | 0.21 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8225 | c.924T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8234 | c.933T>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8237 | c.936A>G | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8247 | c.946_948delATCinsGG | frameshift_variant&missense_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8294 | c.993T>C | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8330 | c.1029C>G | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8337 | c.1036_1038delCTAinsTG | frameshift_variant&stop_gained | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8342 | c.1041G>C | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8366 | c.1065G>T | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8367 | c.1066C>T | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8372 | c.1071G>C | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8375 | c.1074G>C | synonymous_variant | 0.37 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8382 | p.Leu361Met | missense_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8391 | c.1090_1092delTATinsCC | frameshift_variant&missense_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.36 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8400 | c.1099_1101delGACinsAT | frameshift_variant&missense_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8417 | c.1116C>G | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8442 | c.1141C>T | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8528 | c.1227G>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8531 | c.1230G>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8543 | c.1242C>G | synonymous_variant | 0.4 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8546 | c.1245T>C | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8553 | c.1252C>A | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8561 | c.1260A>C | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8588 | c.1287G>A | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8603 | c.1302A>G | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8619 | c.1318T>C | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8624 | c.1323G>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8636 | c.1335A>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8780 | p.Asp493Glu | missense_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8786 | c.1485T>C | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8801 | c.1500G>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8807 | c.1506C>T | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8808 | c.1507_1509delGGAinsCG | frameshift_variant&missense_variant | 0.64 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8816 | c.1515C>G | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8818 | p.Ser506Asn | missense_variant | 0.43 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8828 | c.1527T>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8829 | c.1528T>C | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8852 | c.1551T>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8867 | c.1566A>G | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8873 | c.1572A>C | synonymous_variant | 0.47 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8891 | c.1590G>A | synonymous_variant | 0.53 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.51 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8933 | c.1632G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8946 | c.1645_1647delTTGinsCC | frameshift_variant&missense_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8966 | c.1665C>G | synonymous_variant | 0.34 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8967 | p.Ala556Arg | missense_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8987 | c.1686C>A | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8990 | c.1689C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8996 | c.1695T>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.33 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9017 | c.1716C>G | synonymous_variant | 0.31 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9023 | c.1722A>G | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9119 | c.1818A>G | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9122 | c.1821C>A | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9143 | c.1842T>C | synonymous_variant | 0.43 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9153 | p.Thr618Glu | missense_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9158 | c.1857C>T | synonymous_variant | 0.36 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9161 | c.1860C>G | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9182 | c.1881T>C | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9191 | c.1890G>C | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9200 | c.1899A>G | synonymous_variant | 0.42 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9204 | p.Ser635Thr | missense_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9218 | c.1917C>T | synonymous_variant | 0.42 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9227 | c.1926C>G | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9230 | c.1929T>C | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9233 | c.1932C>G | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9267 | p.Asn656Gly | missense_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9293 | c.1992G>C | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9296 | c.1995T>C | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9299 | c.1998G>C | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9304 | p.Gly668Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9308 | c.2007C>T | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9312 | c.2011C>T | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9317 | c.2016G>T | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9323 | c.2022C>G | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
fgd1 | 491043 | c.261T>G | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491049 | c.267T>C | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491063 | p.Gly94Ala | missense_variant | 0.27 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491077 | p.Asn99Asp | missense_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491082 | c.300T>C | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491091 | c.309T>C | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491094 | c.312C>G | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491097 | c.315G>C | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491100 | c.318C>T | synonymous_variant | 0.26 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fgd1 | 491106 | c.324T>C | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491121 | c.339A>G | synonymous_variant | 0.31 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491130 | c.348C>G | synonymous_variant | 0.28 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491144 | p.Ala121Asp | missense_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491151 | c.369G>A | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
mshA | 575719 | c.372C>T | synonymous_variant | 0.33 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575734 | c.387T>G | synonymous_variant | 0.44 | ethionamide | |
isoniazid | ||||||
mshA | 575737 | c.390T>C | synonymous_variant | 0.44 | ethionamide | |
isoniazid | ||||||
mshA | 575746 | c.399C>G | synonymous_variant | 0.46 | ethionamide | |
isoniazid | ||||||
mshA | 575752 | c.405G>C | synonymous_variant | 0.42 | ethionamide | |
isoniazid | ||||||
mshA | 575755 | c.408G>A | synonymous_variant | 0.4 | ethionamide | |
isoniazid | ||||||
mshA | 575756 | c.409C>T | synonymous_variant | 0.42 | ethionamide | |
isoniazid | ||||||
mshA | 575770 | c.423G>A | synonymous_variant | 0.46 | ethionamide | |
isoniazid | ||||||
mshA | 575771 | p.Val142Ser | missense_variant | 0.43 | ethionamide | |
isoniazid | ||||||
mshA | 575779 | c.432A>G | synonymous_variant | 0.41 | ethionamide | |
isoniazid | ||||||
mshA | 575782 | c.435G>C | synonymous_variant | 0.41 | ethionamide | |
isoniazid | ||||||
mshA | 575809 | c.462C>T | synonymous_variant | 0.46 | ethionamide | |
isoniazid | ||||||
mshA | 575812 | c.465C>T | synonymous_variant | 0.46 | ethionamide | |
isoniazid | ||||||
mshA | 575821 | c.474G>C | synonymous_variant | 0.5 | ethionamide | |
isoniazid | ||||||
mshA | 575824 | c.477T>G | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
mshA | 575830 | c.483C>G | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
mshA | 575833 | c.486C>G | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
mshA | 575845 | c.498C>T | synonymous_variant | 0.45 | ethionamide | |
isoniazid | Not assoc w R - Interim | |||||
mshA | 575884 | c.537G>C | synonymous_variant | 0.4 | ethionamide | |
isoniazid | ||||||
mshA | 575887 | c.540G>C | synonymous_variant | 0.39 | ethionamide | |
isoniazid | ||||||
mshA | 575893 | c.546C>G | synonymous_variant | 0.34 | ethionamide | |
isoniazid | ||||||
mshA | 575896 | c.549G>C | synonymous_variant | 0.33 | ethionamide | |
isoniazid | ||||||
mshA | 575908 | c.561A>G | synonymous_variant | 0.28 | ethionamide | |
isoniazid | ||||||
mshA | 575917 | p.Asp190Glu | missense_variant | 0.28 | ethionamide | |
isoniazid | ||||||
mshA | 575920 | c.573C>G | synonymous_variant | 0.25 | ethionamide | |
isoniazid | ||||||
mshA | 575924 | p.Gly193Ser | missense_variant | 0.26 | ethionamide | |
isoniazid | ||||||
ccsA | 619555 | c.-336C>G | upstream_gene_variant | 0.27 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619561 | c.-330G>C | upstream_gene_variant | 0.26 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619570 | c.-321G>C | upstream_gene_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619574 | c.-317G>A | upstream_gene_variant | 0.24 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619579 | c.-312G>C | upstream_gene_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619584 | c.-307A>T | upstream_gene_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619591 | c.-300G>C | upstream_gene_variant | 0.25 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619609 | c.-282G>T | upstream_gene_variant | 0.2 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620226 | c.336G>A | synonymous_variant | 0.33 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620245 | c.355T>C | synonymous_variant | 0.38 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620249 | p.Ser120Cys | missense_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620254 | c.364_366delCTCinsTG | frameshift_variant&missense_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620265 | c.375C>G | synonymous_variant | 0.39 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620268 | c.378G>C | synonymous_variant | 0.37 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620283 | c.393T>C | synonymous_variant | 0.4 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620284 | c.394_396delGCGinsCC | frameshift_variant&missense_variant | 0.41 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620288 | p.Arg133Gln | missense_variant | 0.42 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620295 | c.405G>T | synonymous_variant | 0.46 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620310 | c.420C>T | synonymous_variant | 0.42 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620317 | c.427_429delGTCinsCG | frameshift_variant&missense_variant | 0.43 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620340 | c.450C>G | synonymous_variant | 0.48 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620346 | c.456C>G | synonymous_variant | 0.47 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620362 | p.Ala158Thr | missense_variant | 0.45 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620367 | c.477T>C | synonymous_variant | 0.43 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620373 | c.483C>G | synonymous_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620376 | c.486G>C | synonymous_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620385 | c.495G>C | synonymous_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620388 | c.498A>G | synonymous_variant | 0.38 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620389 | c.499C>T | synonymous_variant | 0.39 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620412 | c.522T>C | synonymous_variant | 0.36 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620415 | c.525T>C | synonymous_variant | 0.36 | capreomycin | Not assoc w R - Interim |
amikacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
ccsA | 620421 | c.531G>C | synonymous_variant | 0.38 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
Rv0565c | 656289 | c.1182C>G | synonymous_variant | 0.22 | ethionamide | |
Rv0565c | 657578 | c.-108T>C | upstream_gene_variant | 0.41 | ethionamide | |
Rv0565c | 657592 | c.-122A>C | upstream_gene_variant | 0.38 | ethionamide | |
Rv0565c | 657600 | c.-132_-131delCA | upstream_gene_variant | 0.41 | ethionamide | |
Rv0565c | 657606 | c.-136T>G | upstream_gene_variant | 0.36 | ethionamide | |
Rv0565c | 657607 | c.-138_-137insCA | upstream_gene_variant | 0.36 | ethionamide | |
Rv0565c | 657649 | c.-179G>A | upstream_gene_variant | 0.28 | ethionamide | |
Rv0565c | 657671 | c.-201A>G | upstream_gene_variant | 0.26 | ethionamide | |
Rv0565c | 657678 | c.-209_-208delAAinsTC | upstream_gene_variant | 0.26 | ethionamide | |
Rv0565c | 657689 | c.-220_-219delCAinsAC | upstream_gene_variant | 0.24 | ethionamide | |
Rv0565c | 657701 | c.-231C>G | upstream_gene_variant | 0.22 | ethionamide | |
hadA | 731708 | c.-222G>C | upstream_gene_variant | 0.24 | isoniazid | |
hadA | 731710 | c.-220A>T | upstream_gene_variant | 0.24 | isoniazid | |
hadA | 731711 | c.-219T>C | upstream_gene_variant | 0.24 | isoniazid | |
hadA | 731717 | c.-213T>G | upstream_gene_variant | 0.31 | isoniazid | |
hadA | 731732 | c.-198G>A | upstream_gene_variant | 0.35 | isoniazid | |
hadA | 731747 | c.-183T>C | upstream_gene_variant | 0.38 | isoniazid | |
hadA | 731774 | c.-156T>C | upstream_gene_variant | 0.32 | isoniazid | |
hadA | 731789 | c.-141A>G | upstream_gene_variant | 0.33 | isoniazid | |
hadA | 731792 | c.-138G>A | upstream_gene_variant | 0.35 | isoniazid | |
hadA | 731801 | c.-129C>G | upstream_gene_variant | 0.3 | isoniazid | |
hadA | 731816 | c.-114G>A | upstream_gene_variant | 0.28 | isoniazid | |
hadA | 732295 | c.366G>C | synonymous_variant | 0.36 | isoniazid | |
hadA | 732305 | p.Ile126Val | missense_variant | 0.39 | isoniazid | |
hadA | 732308 | p.Val127Ile | missense_variant | 0.43 | isoniazid | |
hadA | 732321 | p.Glu131Ala | missense_variant | 0.52 | isoniazid | |
hadA | 732329 | p.Leu134Val | missense_variant | 0.61 | isoniazid | Uncertain significance |
hadA | 732337 | c.408G>A | synonymous_variant | 0.62 | isoniazid | |
hadA | 732378 | c.450_452dupAGA | disruptive_inframe_insertion | 0.45 | isoniazid | |
hadA | 732396 | p.Gly156Ala | missense_variant | 0.46 | isoniazid | |
hadA | 732398 | p.Ala157Thr | missense_variant | 0.46 | isoniazid | |
nusG | 734442 | c.189G>A | synonymous_variant | 0.26 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.26 | rifampicin | |
nusG | 734457 | c.204C>G | synonymous_variant | 0.26 | rifampicin | |
nusG | 734472 | c.219T>C | synonymous_variant | 0.26 | rifampicin | |
nusG | 734475 | c.222T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
nusG | 734532 | c.279A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
nusG | 734556 | c.303C>T | synonymous_variant | 0.24 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 0.26 | rifampicin | |
nusG | 734580 | c.327T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
nusG | 734589 | c.336G>C | synonymous_variant | 0.27 | rifampicin | |
nusG | 734596 | c.343T>C | synonymous_variant | 0.24 | rifampicin | |
nusG | 734601 | c.348C>G | synonymous_variant | 0.26 | rifampicin | |
nusG | 734610 | c.357C>G | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.43 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 760307 | c.501T>C | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.36 | rifampicin | |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.42 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.35 | rifampicin | |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.39 | rifampicin | Uncertain significance |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.38 | rifampicin | |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760412 | c.606C>G | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.32 | rifampicin | Uncertain significance |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.3 | rifampicin | |
rpoB | 760541 | c.735G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.27 | rifampicin | Uncertain significance |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760718 | c.912C>T | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 760751 | c.945G>C | synonymous_variant | 0.18 | rifampicin | |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.42 | rifampicin | |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761153 | c.1347G>C | synonymous_variant | 0.42 | rifampicin | |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.47 | rifampicin | |
rpoB | 761213 | c.1407G>C | synonymous_variant | 0.49 | rifampicin | |
rpoB | 761219 | c.1413G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761306 | c.1500C>G | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761312 | c.1506G>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761330 | c.1524G>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761408 | c.1602G>C | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761414 | c.1608A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 761423 | c.1617T>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.45 | rifampicin | |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.47 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.44 | rifampicin | |
rpoB | 761772 | p.His656Ala | missense_variant | 0.38 | rifampicin | |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.39 | rifampicin | |
rpoB | 761791 | p.Arg662His | missense_variant | 0.38 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.33 | rifampicin | |
rpoB | 761834 | c.2028T>C | synonymous_variant | 0.3 | rifampicin | |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.34 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.39 | rifampicin | |
rpoB | 761858 | c.2052G>C | synonymous_variant | 0.37 | rifampicin | |
rpoB | 761873 | c.2067A>C | synonymous_variant | 0.42 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.48 | rifampicin | |
rpoB | 761906 | c.2100C>G | synonymous_variant | 0.34 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.32 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.32 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 762008 | c.2202C>T | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.33 | rifampicin | |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.32 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.33 | rifampicin | |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762206 | c.2400C>G | synonymous_variant | 0.36 | rifampicin | |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 762246 | c.2440C>T | synonymous_variant | 0.3 | rifampicin | |
rpoB | 762254 | c.2448T>G | synonymous_variant | 0.24 | rifampicin | |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.22 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 762467 | c.-903C>T | upstream_gene_variant | 0.25 | rifampicin | |
rpoB | 762782 | c.2976T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 762785 | p.Asp993Glu | missense_variant | 0.44 | rifampicin | Uncertain significance |
rpoB | 762788 | c.2982G>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 762789 | p.Leu995Met | missense_variant | 0.44 | rifampicin | Uncertain significance |
rpoC | 762794 | c.-576C>G | upstream_gene_variant | 0.47 | rifampicin | |
rpoB | 762799 | p.Ala998Gly | missense_variant | 0.45 | rifampicin | Uncertain significance |
rpoB | 762810 | c.3004_3006delGCCinsTG | frameshift_variant&missense_variant | 0.41 | rifampicin | |
rpoB | 762813 | p.Met1003Val | missense_variant | 0.43 | rifampicin | |
rpoB | 762818 | c.3012C>G | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 762827 | c.3021G>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 762857 | c.3051C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 762860 | c.3054G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 762863 | c.3057T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 762926 | c.3120C>T | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoB | 762995 | c.3189G>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763013 | c.-357C>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoC | 763025 | c.-345C>T | upstream_gene_variant | 0.26 | rifampicin | |
rpoB | 763028 | c.3222T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 763136 | c.3330C>T | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.35 | rifampicin | |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 0.38 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 763190 | c.-180C>T | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.39 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.5 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763603 | c.234C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.28 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764102 | p.Val245Ile | missense_variant | 0.42 | rifampicin | |
rpoC | 764112 | p.Tyr248Phe | missense_variant | 0.38 | rifampicin | |
rpoC | 764116 | c.747C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.32 | rifampicin | |
rpoC | 764140 | c.771C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764215 | c.846A>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 764236 | c.867G>A | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764248 | c.879C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764272 | c.903G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 764419 | c.1050C>G | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764489 | c.1120C>T | synonymous_variant | 0.45 | rifampicin | |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 764510 | c.1141C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.47 | rifampicin | |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.47 | rifampicin | |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.47 | rifampicin | |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.44 | rifampicin | |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764651 | c.1282_1284delTCGinsAGC | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.45 | rifampicin | Not assoc w R |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764932 | c.1563C>A | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 764995 | c.1626C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765034 | c.1665T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 765040 | c.1671T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 765041 | c.1672T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 765047 | c.1678T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 765053 | c.1684_1685delTCinsAG | synonymous_variant | 0.28 | rifampicin | |
rpoC | 765073 | c.1704G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765076 | c.1707A>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 765079 | c.1710T>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765082 | c.1713G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765089 | c.1720T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765103 | c.1734G>T | synonymous_variant | 0.22 | rifampicin | |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.39 | rifampicin | |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.42 | rifampicin | |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.46 | rifampicin | |
rpoC | 765613 | p.His748Gln | missense_variant | 0.43 | rifampicin | |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.4 | rifampicin | |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 765850 | c.2481G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.35 | rifampicin | |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.44 | rifampicin | |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.5 | rifampicin | |
rpoC | 766030 | c.2661C>G | synonymous_variant | 0.48 | rifampicin | |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.46 | rifampicin | |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.34 | rifampicin | |
rpoC | 766096 | c.2727G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.19 | rifampicin | |
rpoC | 766135 | c.2766G>A | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 766142 | c.2773C>T | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 766280 | p.Ser971Gly | missense_variant | 0.17 | rifampicin | |
rpoC | 766288 | c.2919C>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766327 | c.2958C>A | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.31 | rifampicin | |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.41 | rifampicin | |
rpoC | 766390 | c.3021C>T | synonymous_variant | 0.4 | rifampicin | |
rpoC | 766408 | c.3039C>G | synonymous_variant | 0.39 | rifampicin | |
rpoC | 766411 | c.3042C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766462 | c.3093G>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766483 | c.3114G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766484 | c.3115_3117delGTAinsAC | frameshift_variant&missense_variant | 0.26 | rifampicin | |
rpoC | 766492 | c.3123T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766522 | c.3153C>G | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766528 | c.3159T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766531 | c.3162G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766540 | p.Asp1057Glu | missense_variant | 0.25 | rifampicin | |
rpoC | 766549 | c.3180G>T | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.38 | rifampicin | |
rpoC | 766630 | c.3261G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766660 | c.3291G>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766673 | p.Gly1102Asn | missense_variant | 0.29 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 0.42 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.42 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>A | synonymous_variant | 0.35 | rifampicin | |
rpoC | 767158 | c.3789T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.34 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781649 | c.90T>C | synonymous_variant | 0.37 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.41 | streptomycin | |
rpsL | 781700 | c.141G>C | synonymous_variant | 0.56 | streptomycin | |
rpsL | 781703 | c.144G>T | synonymous_variant | 0.56 | streptomycin | |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.62 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.65 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.64 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.64 | streptomycin | |
rpsL | 781748 | c.189C>G | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.57 | streptomycin | |
rpsL | 781772 | c.213C>A | synonymous_variant | 0.53 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.31 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.24 | streptomycin | |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.24 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.35 | streptomycin | Uncertain significance |
rplC | 800582 | c.-227C>G | upstream_gene_variant | 0.3 | linezolid | |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.26 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.27 | linezolid | |
rplC | 800627 | c.-182C>T | upstream_gene_variant | 0.38 | linezolid | |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.39 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.34 | linezolid | |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.33 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.37 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.36 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.37 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.33 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.33 | linezolid | |
rplC | 800794 | c.-15A>G | upstream_gene_variant | 0.26 | linezolid | |
rplC | 800796 | c.-13A>G | upstream_gene_variant | 0.25 | linezolid | |
rplC | 800798 | c.-10_-9delGG | upstream_gene_variant | 0.26 | linezolid | |
rplC | 800814 | c.6A>G | synonymous_variant | 0.27 | linezolid | |
rplC | 800817 | c.9A>T | synonymous_variant | 0.25 | linezolid | |
rplC | 801438 | c.630T>C | synonymous_variant | 0.18 | linezolid | |
rplC | 801442 | p.Ile212Val | missense_variant | 0.18 | linezolid | |
fbiC | 1303575 | c.645G>C | synonymous_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303590 | c.660A>G | synonymous_variant | 0.24 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303785 | c.855G>C | synonymous_variant | 0.19 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303797 | c.867A>G | synonymous_variant | 0.18 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304553 | c.1623C>T | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304559 | p.Glu543Asp | missense_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304565 | c.1635C>G | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304568 | c.1638T>C | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304580 | c.1650T>C | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304613 | c.1683T>C | synonymous_variant | 0.26 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304715 | c.1785G>C | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304724 | c.1794A>G | synonymous_variant | 0.32 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1304727 | c.1797A>G | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304739 | c.1809C>T | synonymous_variant | 0.33 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304742 | c.1812T>C | synonymous_variant | 0.35 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304757 | c.1827A>G | synonymous_variant | 0.3 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304778 | c.1848T>C | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304784 | c.1854T>C | synonymous_variant | 0.39 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304787 | c.1857T>G | synonymous_variant | 0.46 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304808 | c.1878C>G | synonymous_variant | 0.45 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304811 | c.1881C>G | synonymous_variant | 0.45 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304817 | c.1887T>C | synonymous_variant | 0.48 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304829 | c.1899T>C | synonymous_variant | 0.5 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304832 | c.1902C>T | synonymous_variant | 0.53 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1304856 | c.1926C>G | synonymous_variant | 0.82 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304862 | c.1932G>A | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304916 | c.1986T>C | synonymous_variant | 0.33 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304928 | c.1998T>C | synonymous_variant | 0.35 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304937 | c.2007G>C | synonymous_variant | 0.29 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
atpE | 1460861 | c.-184C>G | upstream_gene_variant | 0.2 | bedaquiline | |
atpE | 1461170 | c.126A>G | synonymous_variant | 0.38 | bedaquiline | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.73 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 0.73 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.73 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.29 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.29 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.36 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.46 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.36 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.53 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472579 | n.734G>T | non_coding_transcript_exon_variant | 0.41 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.92 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.4 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.5 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.5 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.4 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.44 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.47 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.5 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.39 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.57 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.38 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.35 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.58 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472955 | n.1110C>T | non_coding_transcript_exon_variant | 0.58 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.68 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.67 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.67 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.62 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.62 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.73 | streptomycin | Uncertain significance |
kanamycin | Not assoc w R | |||||
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.76 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.7 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.7 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.75 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.76 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.68 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.68 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.64 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.68 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.67 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.67 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.62 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.75 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.76 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.68 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.28 | streptomycin | Uncertain significance |
kanamycin | Not assoc w R | |||||
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.8 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.7 | capreomycin | |
linezolid | ||||||
rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.86 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.85 | capreomycin | |
linezolid | ||||||
rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.64 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.86 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.86 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.67 | capreomycin | |
linezolid | ||||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.71 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.76 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474831 | n.1174A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.91 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1474883 | n.1226T>C | non_coding_transcript_exon_variant | 0.6 | capreomycin | |
linezolid | ||||||
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.92 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.67 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.67 | capreomycin | |
linezolid | ||||||
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.8 | capreomycin | |
linezolid | ||||||
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 0.95 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.9 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.9 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 0.88 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 0.9 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.89 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.88 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.6 | capreomycin | |
linezolid | ||||||
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.79 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.77 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.7 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.8 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 0.7 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.7 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.5 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476227 | n.2570C>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1476229 | n.2572C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.5 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.83 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.57 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.53 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.83 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 0.83 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 0.83 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.77 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.82 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.56 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 0.83 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.83 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.56 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.6 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.6 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.72 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.74 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.77 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.78 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.79 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.79 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.62 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.86 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.84 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.42 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.74 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.61 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
inhA | 1674672 | c.471C>G | synonymous_variant | 0.26 | ethionamide | |
isoniazid | ||||||
inhA | 1674703 | c.502T>C | synonymous_variant | 0.21 | ethionamide | |
isoniazid | ||||||
inhA | 1674708 | c.507G>A | synonymous_variant | 0.23 | ethionamide | |
isoniazid | ||||||
inhA | 1674718 | c.517A>C | synonymous_variant | 0.23 | ethionamide | |
isoniazid | ||||||
inhA | 1674738 | c.537C>G | synonymous_variant | 0.2 | ethionamide | |
isoniazid | ||||||
rpsA | 1833554 | p.Thr5Ala | missense_variant | 0.2 | pyrazinamide | Uncertain significance |
rpsA | 1833568 | c.27G>C | synonymous_variant | 0.24 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833589 | c.48A>T | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1833595 | c.54T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833748 | c.207C>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.41 | pyrazinamide | |
rpsA | 1833886 | c.345C>G | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834081 | c.540C>T | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834123 | c.582C>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834150 | c.609G>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834153 | c.612T>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834154 | c.613_615delAACinsCG | frameshift_variant&missense_variant | 0.21 | pyrazinamide | Uncertain significance |
rpsA | 1834157 | c.616T>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834162 | c.621A>G | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834165 | c.624A>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.22 | pyrazinamide | Uncertain significance |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834210 | c.669C>T | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834231 | c.690T>C | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834540 | c.999G>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834555 | c.1014T>G | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834618 | c.1077G>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834654 | p.Glu371Asp | missense_variant | 0.31 | pyrazinamide | |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834733 | p.Ala398Ser | missense_variant | 0.26 | pyrazinamide | |
rpsA | 1834738 | c.1197A>G | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834765 | p.Glu408Asp | missense_variant | 0.29 | pyrazinamide | |
rpsA | 1834775 | p.Ala412Thr | missense_variant | 0.3 | pyrazinamide | |
rpsA | 1834780 | c.1239A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834786 | c.1245A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834789 | c.1248T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834792 | c.1251G>C | synonymous_variant | 0.28 | pyrazinamide | |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1918036 | p.Arg33Ser | missense_variant | 0.6 | capreomycin | |
bacA | 2064978 | c.-250G>C | upstream_gene_variant | 0.17 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064984 | c.-256A>G | upstream_gene_variant | 0.19 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
bacA | 2064993 | c.-265T>C | upstream_gene_variant | 0.19 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 0.25 | isoniazid | |
kasA | 2518528 | c.414C>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518540 | c.426T>C | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518561 | c.447T>C | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518567 | c.453G>C | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518570 | c.456G>C | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518574 | c.460_462delATCinsGG | frameshift_variant&missense_variant | 0.43 | isoniazid | |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.45 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518591 | c.477G>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518609 | p.Met165Ile | missense_variant | 0.58 | isoniazid | |
kasA | 2518624 | c.510C>G | synonymous_variant | 0.6 | isoniazid | |
kasA | 2518639 | c.525G>C | synonymous_variant | 0.56 | isoniazid | |
kasA | 2518657 | c.543G>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518864 | c.750G>C | synonymous_variant | 0.33 | isoniazid | |
kasA | 2518879 | c.765A>G | synonymous_variant | 0.35 | isoniazid | |
kasA | 2518885 | c.771T>C | synonymous_variant | 0.33 | isoniazid | |
kasA | 2518898 | c.784T>C | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518906 | c.792A>G | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518910 | p.Leu266Met | missense_variant | 0.32 | isoniazid | |
kasA | 2518921 | c.807T>C | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518927 | c.813C>G | synonymous_variant | 0.3 | isoniazid | |
kasA | 2518936 | c.822C>G | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518939 | c.825T>C | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518942 | c.828T>C | synonymous_variant | 0.33 | isoniazid | |
ahpC | 2726600 | c.408T>C | synonymous_variant | 0.31 | isoniazid | |
ahpC | 2726601 | p.Ile137Leu | missense_variant | 0.32 | isoniazid | |
ahpC | 2726638 | p.Ala149Val | missense_variant | 0.34 | isoniazid | |
ahpC | 2726645 | c.453C>G | synonymous_variant | 0.29 | isoniazid | |
ahpC | 2726657 | c.465A>C | synonymous_variant | 0.27 | isoniazid | Not assoc w R - Interim |
ahpC | 2726669 | p.Asp159Glu | missense_variant | 0.29 | isoniazid | |
Rv2477c | 2782864 | c.1179T>C | synonymous_variant | 0.35 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782869 | p.Ala392Thr | missense_variant | 0.35 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | ||||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2782876 | c.1167G>C | synonymous_variant | 0.34 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782882 | c.1161T>C | synonymous_variant | 0.35 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782912 | p.Ser377Thr | missense_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782927 | p.Thr372Glu | missense_variant | 0.44 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782936 | c.1107G>T | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782948 | c.1095A>G | synonymous_variant | 0.46 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782957 | c.1086A>G | synonymous_variant | 0.4 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782966 | c.1077C>A | synonymous_variant | 0.45 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782969 | c.1074A>C | synonymous_variant | 0.45 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782972 | c.1071G>C | synonymous_variant | 0.47 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782981 | c.1062G>C | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782984 | c.1059T>C | synonymous_variant | 0.39 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782990 | c.1053C>G | synonymous_variant | 0.34 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783002 | c.1041T>C | synonymous_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783008 | c.1035C>G | synonymous_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783013 | c.1030T>C | synonymous_variant | 0.32 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783015 | p.Ser343Thr | missense_variant | 0.34 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783035 | c.1008G>C | synonymous_variant | 0.37 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783040 | p.Ala335Thr | missense_variant | 0.38 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2783044 | c.999G>C | synonymous_variant | 0.34 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783048 | p.Asp332Gly | missense_variant | 0.33 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783059 | c.984T>C | synonymous_variant | 0.35 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783068 | p.Asp325Glu | missense_variant | 0.38 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783077 | c.966T>C | synonymous_variant | 0.4 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783092 | c.951A>G | synonymous_variant | 0.34 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783095 | c.948C>G | synonymous_variant | 0.33 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783098 | c.945C>G | synonymous_variant | 0.36 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783101 | c.942G>T | synonymous_variant | 0.36 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783116 | c.927T>C | synonymous_variant | 0.33 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783140 | c.903C>G | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783146 | c.897G>A | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | ||||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783149 | c.894G>C | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783158 | c.885A>C | synonymous_variant | 0.41 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783293 | c.750G>A | synonymous_variant | 0.23 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783299 | c.744A>G | synonymous_variant | 0.21 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783302 | c.741A>G | synonymous_variant | 0.21 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783311 | c.732T>C | synonymous_variant | 0.19 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783314 | c.729C>G | synonymous_variant | 0.2 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783317 | c.726G>C | synonymous_variant | 0.2 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783329 | c.714G>A | synonymous_variant | 0.21 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783332 | c.711T>C | synonymous_variant | 0.19 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783335 | c.708C>G | synonymous_variant | 0.2 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783344 | c.699C>G | synonymous_variant | 0.23 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783350 | c.693T>C | synonymous_variant | 0.23 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783353 | c.690T>C | synonymous_variant | 0.24 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783359 | c.684G>A | synonymous_variant | 0.25 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783374 | c.669G>C | synonymous_variant | 0.22 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783395 | c.648T>G | synonymous_variant | 0.25 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783700 | p.Thr115Ser | missense_variant | 0.25 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783718 | c.325T>C | synonymous_variant | 0.19 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783719 | c.324A>G | synonymous_variant | 0.19 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
thyX | 3067530 | p.Ala139Ser | missense_variant | 0.53 | para-aminosalicylic_acid | |
thyX | 3067545 | p.Glu134Ala | missense_variant | 0.6 | para-aminosalicylic_acid | |
thyX | 3067549 | p.Thr133Ala | missense_variant | 0.55 | para-aminosalicylic_acid | |
thyX | 3067556 | p.His130Gln | missense_variant | 0.5 | para-aminosalicylic_acid | |
thyX | 3067559 | c.387C>G | synonymous_variant | 0.54 | para-aminosalicylic_acid | |
thyX | 3067565 | p.Asp127Glu | missense_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067570 | p.Ala126Pro | missense_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067577 | c.369G>A | synonymous_variant | 0.64 | para-aminosalicylic_acid | |
thyX | 3067583 | c.363C>G | synonymous_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067601 | p.Arg115His | missense_variant | 0.6 | para-aminosalicylic_acid | |
thyX | 3067611 | p.Lys112Thr | missense_variant | 0.57 | para-aminosalicylic_acid | |
thyX | 3067619 | c.327A>C | synonymous_variant | 0.55 | para-aminosalicylic_acid | |
thyX | 3067631 | c.315C>G | synonymous_variant | 0.55 | para-aminosalicylic_acid | |
thyX | 3067634 | c.312C>G | synonymous_variant | 0.57 | para-aminosalicylic_acid | |
thyX | 3067652 | c.294T>C | synonymous_variant | 0.58 | para-aminosalicylic_acid | |
thyX | 3067661 | c.285C>G | synonymous_variant | 0.55 | para-aminosalicylic_acid | |
thyX | 3067685 | c.261A>C | synonymous_variant | 0.5 | para-aminosalicylic_acid | |
thyX | 3067691 | c.253_255delATCinsCG | frameshift_variant&missense_variant | 0.44 | para-aminosalicylic_acid | |
thyX | 3067694 | c.252G>C | synonymous_variant | 0.42 | para-aminosalicylic_acid | |
thyX | 3067718 | c.228C>G | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067721 | c.225T>C | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067727 | c.219A>C | synonymous_variant | 0.39 | para-aminosalicylic_acid | |
thyX | 3067736 | c.208_210delTTCinsCT | frameshift_variant&missense_variant | 0.4 | para-aminosalicylic_acid | |
thyX | 3067739 | c.207T>C | synonymous_variant | 0.4 | para-aminosalicylic_acid | |
thyX | 3067761 | p.Arg62Lys | missense_variant | 0.44 | para-aminosalicylic_acid | |
thyX | 3067765 | p.Leu61Ile | missense_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067772 | c.174C>G | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067781 | c.165C>A | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067793 | c.153T>C | synonymous_variant | 0.46 | para-aminosalicylic_acid | |
thyX | 3067799 | c.147G>A | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
thyX | 3067802 | c.144C>G | synonymous_variant | 0.41 | para-aminosalicylic_acid | |
thyX | 3067814 | c.132T>C | synonymous_variant | 0.42 | para-aminosalicylic_acid | |
thyX | 3067850 | c.96A>C | synonymous_variant | 0.3 | para-aminosalicylic_acid | |
thyX | 3067869 | p.Thr26Ser | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067874 | c.72C>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067883 | c.63C>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyX | 3067886 | c.60A>C | synonymous_variant | 0.27 | para-aminosalicylic_acid | |
thyX | 3067889 | c.57C>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyX | 3067898 | p.Asp16Glu | missense_variant | 0.27 | para-aminosalicylic_acid | |
thyA | 3073860 | c.612C>G | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
thyA | 3073863 | c.609T>C | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyA | 3073866 | c.604_606delACCinsGG | frameshift_variant&missense_variant | 0.29 | para-aminosalicylic_acid | |
thyA | 3073872 | c.598_600delATCinsGG | frameshift_variant&missense_variant | 0.28 | para-aminosalicylic_acid | |
thyA | 3073892 | c.580T>C | synonymous_variant | 0.4 | para-aminosalicylic_acid | |
thyA | 3073898 | p.Ala192Ser | missense_variant | 0.4 | para-aminosalicylic_acid | |
thyA | 3073917 | c.555C>G | synonymous_variant | 0.41 | para-aminosalicylic_acid | |
thyA | 3073920 | c.552C>G | synonymous_variant | 0.45 | para-aminosalicylic_acid | |
thyA | 3073925 | c.547T>C | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
thyA | 3073929 | c.543T>C | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.42 | para-aminosalicylic_acid | |
thyA | 3073956 | c.516G>C | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
thyA | 3073959 | c.513T>C | synonymous_variant | 0.42 | para-aminosalicylic_acid | |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.27 | para-aminosalicylic_acid | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
lpqB | 3623492 | c.1419T>C | synonymous_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623512 | p.Gly467Ser | missense_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623528 | c.1383G>C | synonymous_variant | 0.3 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3623549 | c.1362C>G | synonymous_variant | 0.27 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623555 | c.1354_1356delGGGinsAC | frameshift_variant&missense_variant | 0.26 | bedaquiline | |
rifampicin | Uncertain significance | |||||
lpqB | 3623561 | c.1350T>C | synonymous_variant | 0.26 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623570 | c.1341A>G | synonymous_variant | 0.25 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623573 | c.1336_1338delCTTinsTG | frameshift_variant&synonymous_variant | 0.25 | bedaquiline | |
rifampicin | Uncertain significance | |||||
lpqB | 3623580 | p.Asn444Thr | missense_variant | 0.26 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623587 | p.Ala442Pro | missense_variant | 0.27 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623597 | c.1314C>G | synonymous_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623601 | p.Ser437Thr | missense_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623612 | p.Thr433Val | missense_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
lpqB | 3623630 | c.1281G>C | synonymous_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | bedaquiline | Uncertain significance |
rifampicin | Not assoc w R | |||||
lpqB | 3625510 | c.-600T>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625513 | c.-603G>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625518 | c.-608T>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625525 | c.-615G>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625528 | c.-618G>T | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625537 | c.-627T>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625543 | c.-633G>C | upstream_gene_variant | 0.34 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625549 | c.-639G>A | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625569 | c.1045T>C | synonymous_variant | 0.38 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625572 | p.Thr348Ser | missense_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625579 | c.-669A>G | upstream_gene_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625594 | c.-684T>C | upstream_gene_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625602 | c.-692T>C | upstream_gene_variant | 0.44 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625612 | c.-702G>C | upstream_gene_variant | 0.47 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625616 | p.Arg333Ala | missense_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625624 | c.-714C>G | upstream_gene_variant | 0.51 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625636 | c.978C>G | synonymous_variant | 0.47 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625656 | c.958T>C | synonymous_variant | 0.38 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 0.35 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625669 | c.-759G>C | upstream_gene_variant | 0.35 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625687 | c.-777G>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 0.34 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625696 | c.-786A>G | upstream_gene_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625705 | c.909C>G | synonymous_variant | 0.41 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625714 | c.-804C>T | upstream_gene_variant | 0.39 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625720 | c.894G>C | synonymous_variant | 0.38 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 0.4 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625735 | c.-825C>T | upstream_gene_variant | 0.37 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625749 | c.-839C>T | upstream_gene_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625750 | c.864G>A | synonymous_variant | 0.38 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625755 | p.Ala287Thr | missense_variant | 0.38 | bedaquiline | |
rifampicin | Uncertain significance | |||||
mtrB | 3625765 | c.849C>G | synonymous_variant | 0.38 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625774 | c.840G>A | synonymous_variant | 0.37 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625797 | p.Val273Met | missense_variant | 0.38 | bedaquiline | Uncertain significance |
rifampicin | Uncertain significance | |||||
mtrB | 3625806 | c.808A>C | synonymous_variant | 0.36 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625807 | c.807C>G | synonymous_variant | 0.36 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625837 | c.777C>G | synonymous_variant | 0.4 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625849 | c.-939T>C | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625852 | c.762A>G | synonymous_variant | 0.33 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625864 | c.-954T>G | upstream_gene_variant | 0.36 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625876 | c.738G>C | synonymous_variant | 0.38 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625900 | c.-990G>C | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625903 | c.-993G>C | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625909 | c.-999T>C | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625927 | c.687T>C | synonymous_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626759 | c.591T>C | synonymous_variant | 0.23 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3626774 | c.574_576delAGGinsCC | frameshift_variant&missense_variant | 0.19 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626783 | c.-170C>G | upstream_gene_variant | 0.18 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 0.18 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626795 | c.-182C>T | upstream_gene_variant | 0.18 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626804 | c.546A>G | synonymous_variant | 0.18 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626840 | c.-227C>G | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626846 | c.504G>A | synonymous_variant | 0.29 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626858 | c.-245A>G | upstream_gene_variant | 0.28 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626861 | c.-248C>G | upstream_gene_variant | 0.27 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626866 | c.-253T>C | upstream_gene_variant | 0.25 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626876 | c.-263A>G | upstream_gene_variant | 0.3 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626885 | c.-272A>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626890 | c.-277T>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626903 | c.-290T>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626912 | c.-299T>G | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626927 | c.-314G>C | upstream_gene_variant | 0.41 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626930 | c.-317A>G | upstream_gene_variant | 0.44 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626939 | c.411A>G | synonymous_variant | 0.43 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626942 | c.-329A>C | upstream_gene_variant | 0.43 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626957 | c.-344G>C | upstream_gene_variant | 0.42 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 0.19 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627181 | c.-568T>C | upstream_gene_variant | 0.24 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627182 | c.-569T>C | upstream_gene_variant | 0.24 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627188 | c.162A>G | synonymous_variant | 0.25 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627209 | c.-596G>A | upstream_gene_variant | 0.3 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627221 | c.129C>T | synonymous_variant | 0.35 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 0.32 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627233 | c.-620T>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627236 | c.-623T>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627242 | c.108C>T | synonymous_variant | 0.3 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627254 | c.-641C>T | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627263 | c.-650C>T | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627266 | c.-653A>G | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627272 | c.-659G>T | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627275 | c.-662G>T | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627296 | c.-683T>C | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627299 | c.49_51delTTGinsCA | frameshift_variant&missense_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627314 | c.-701C>T | upstream_gene_variant | 0.32 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627317 | c.-704T>C | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627343 | p.Thr3Ser | missense_variant | 0.35 | bedaquiline | |
rifampicin | ||||||
fbiA | 3640900 | p.Gln120Lys | missense_variant | 0.17 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiB | 3640914 | c.-621C>G | upstream_gene_variant | 0.18 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiA | 3640930 | p.Glu130Thr | missense_variant | 0.19 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiB | 3640935 | c.-600C>G | upstream_gene_variant | 0.2 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiB | 3640938 | c.-597A>G | upstream_gene_variant | 0.2 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiB | 3640944 | c.-591T>C | upstream_gene_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiB | 3640962 | c.-573C>G | upstream_gene_variant | 0.21 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
alr | 3841546 | c.-126C>A | upstream_gene_variant | 1.0 | cycloserine | |
rpoA | 3877503 | c.1005G>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3877507 | p.Gly334Ala | missense_variant | 0.29 | rifampicin | |
rpoA | 3877515 | c.993G>C | synonymous_variant | 0.4 | rifampicin | |
rpoA | 3877553 | p.Glu319Gln | missense_variant | 0.38 | rifampicin | |
rpoA | 3877571 | p.Pro313Ala | missense_variant | 0.4 | rifampicin | |
rpoA | 3877587 | c.921A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoA | 3877613 | p.Ile299Val | missense_variant | 0.42 | rifampicin | |
rpoA | 3877656 | c.852T>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.36 | rifampicin | |
rpoA | 3877679 | p.Ala277Ser | missense_variant | 0.38 | rifampicin | |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>C | synonymous_variant | 0.32 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877791 | c.717C>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3877848 | c.660C>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3877875 | c.633T>G | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3877878 | c.630G>C | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3877890 | c.618C>T | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3877896 | c.612G>C | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3877900 | p.Ser203Asn | missense_variant | 0.41 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoA | 3877909 | p.Asn200Ser | missense_variant | 0.38 | rifampicin | |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoA | 3877923 | c.585C>T | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoA | 3877926 | c.582G>C | synonymous_variant | 0.37 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3878001 | c.507A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoA | 3878022 | c.486T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878028 | c.480G>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878031 | c.477T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878040 | c.468T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3878043 | c.465G>A | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878058 | c.450G>T | synonymous_variant | 0.2 | rifampicin | |
rpoA | 3878094 | c.414C>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3878169 | c.339G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3878172 | c.336G>C | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878181 | c.327C>T | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878187 | c.321C>G | synonymous_variant | 0.2 | rifampicin | |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoA | 3878226 | c.282C>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878232 | c.276G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878247 | c.261G>C | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoA | 3878284 | p.Glu75Ala | missense_variant | 0.44 | rifampicin | |
rpoA | 3878292 | c.216T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoA | 3878298 | c.210A>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoA | 3878304 | c.204G>C | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoA | 3878334 | c.174T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoA | 3878340 | c.168C>T | synonymous_variant | 0.43 | rifampicin | |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.45 | rifampicin | |
rpoA | 3878364 | c.144A>T | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878367 | c.141C>G | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878376 | c.132G>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3878388 | c.120C>G | synonymous_variant | 0.49 | rifampicin | |
rpoA | 3878391 | c.117T>C | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878415 | c.93C>T | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878424 | c.84G>C | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878436 | c.72A>G | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878442 | c.66G>C | synonymous_variant | 0.48 | rifampicin | |
rpoA | 3878878 | c.-371T>C | upstream_gene_variant | 0.35 | rifampicin | Uncertain significance |
rpoA | 3878909 | c.-402A>G | upstream_gene_variant | 0.39 | rifampicin | |
rpoA | 3878914 | c.-407T>C | upstream_gene_variant | 0.42 | rifampicin | Uncertain significance |
rpoA | 3878917 | c.-410G>A | upstream_gene_variant | 0.42 | rifampicin | Uncertain significance |
rpoA | 3878938 | c.-431T>A | upstream_gene_variant | 0.45 | rifampicin | |
rpoA | 3878947 | c.-440G>C | upstream_gene_variant | 0.39 | rifampicin | Uncertain significance |
rpoA | 3878962 | c.-455G>A | upstream_gene_variant | 0.37 | rifampicin | Uncertain significance |
rpoA | 3878968 | c.-461T>C | upstream_gene_variant | 0.33 | rifampicin | Uncertain significance |
rpoA | 3878976 | c.-469A>G | upstream_gene_variant | 0.31 | rifampicin | Uncertain significance |
rpoA | 3878986 | c.-479G>C | upstream_gene_variant | 0.29 | rifampicin | |
rpoA | 3878998 | c.-491C>G | upstream_gene_variant | 0.26 | rifampicin | Uncertain significance |
rpoA | 3879005 | c.-499_-498delAAinsCG | upstream_gene_variant | 0.3 | rifampicin | |
rpoA | 3879013 | c.-506A>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoA | 3879079 | c.-572A>G | upstream_gene_variant | 0.32 | rifampicin | |
rpoA | 3879088 | c.-581A>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoA | 3879094 | c.-587T>C | upstream_gene_variant | 0.34 | rifampicin | |
rpoA | 3879121 | c.-614T>G | upstream_gene_variant | 0.31 | rifampicin | |
rpoA | 3879127 | c.-620T>C | upstream_gene_variant | 0.31 | rifampicin | |
rpoA | 3879154 | c.-647T>C | upstream_gene_variant | 0.35 | rifampicin | |
rpoA | 3879160 | c.-653A>G | upstream_gene_variant | 0.33 | rifampicin | |
clpC1 | 4038287 | c.2418C>T | synonymous_variant | 0.78 | pyrazinamide | Not assoc w R |
clpC1 | 4038293 | c.2412G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038302 | c.2403C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038308 | c.2395_2397delGTGinsAT | frameshift_variant&missense_variant | 0.23 | pyrazinamide | |
clpC1 | 4038314 | c.2391T>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4038317 | c.2388G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038320 | c.2385G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038388 | c.2317T>C | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4038392 | c.2313C>T | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038433 | c.2272C>T | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038434 | c.2271G>A | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.19 | pyrazinamide | |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038456 | p.Val750Glu | missense_variant | 0.21 | pyrazinamide | |
clpC1 | 4038460 | p.Leu749Met | missense_variant | 0.21 | pyrazinamide | |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.19 | pyrazinamide | |
clpC1 | 4038596 | c.2109A>G | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 0.37 | pyrazinamide | |
clpC1 | 4038653 | c.2052C>T | synonymous_variant | 0.39 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 0.35 | pyrazinamide | |
clpC1 | 4038661 | p.Ser682Thr | missense_variant | 0.33 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038671 | c.2034T>C | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>C | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038695 | c.2010C>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4038701 | c.2004G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4038707 | c.1998C>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038710 | c.1995G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038749 | c.1956C>G | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4038755 | c.1950G>T | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.45 | pyrazinamide | |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4038821 | c.1884G>A | synonymous_variant | 0.45 | pyrazinamide | |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.41 | pyrazinamide | |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.39 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.32 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.37 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4038923 | c.1780_1782delCTAinsTG | frameshift_variant&synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039004 | c.1701C>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.38 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 0.38 | pyrazinamide | |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.39 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.38 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039186 | c.1519C>T | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039229 | c.1476C>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4039274 | c.1431G>C | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039622 | c.1083C>T | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039625 | c.1080G>A | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039661 | c.1044T>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039664 | c.1041G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039775 | c.930G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039778 | c.927A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039781 | c.924G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039790 | c.915C>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039820 | c.885T>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039826 | c.879C>G | synonymous_variant | 0.38 | pyrazinamide | |
clpC1 | 4039831 | c.874T>C | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.37 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.37 | pyrazinamide | |
clpC1 | 4039928 | c.775_777delAGCinsTCG | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4039946 | c.759A>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4040036 | c.669C>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4040090 | c.613_615delTCTinsAGC | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040105 | c.600C>G | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4040147 | c.558A>G | synonymous_variant | 0.29 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040162 | c.543G>C | synonymous_variant | 0.29 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040165 | c.540G>C | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040171 | c.534C>G | synonymous_variant | 0.25 | pyrazinamide | |
panD | 4044712 | c.-431C>A | upstream_gene_variant | 0.22 | pyrazinamide | |
panD | 4044725 | c.-444C>T | upstream_gene_variant | 0.28 | pyrazinamide | |
panD | 4044737 | c.-456T>C | upstream_gene_variant | 0.3 | pyrazinamide | |
panD | 4044746 | c.-467_-465delGTGinsAC | upstream_gene_variant | 0.31 | pyrazinamide | |
panD | 4044752 | c.-471T>C | upstream_gene_variant | 0.3 | pyrazinamide | |
panD | 4044758 | c.-477C>T | upstream_gene_variant | 0.29 | pyrazinamide | |
panD | 4044779 | c.-500_-498delCTAinsTGC | upstream_gene_variant | 0.32 | pyrazinamide | |
panD | 4044788 | c.-507G>C | upstream_gene_variant | 0.32 | pyrazinamide | |
panD | 4044791 | c.-510G>C | upstream_gene_variant | 0.33 | pyrazinamide | |
panD | 4044800 | c.-519C>G | upstream_gene_variant | 0.35 | pyrazinamide | |
panD | 4044812 | c.-531A>C | upstream_gene_variant | 0.36 | pyrazinamide | |
panD | 4044818 | c.-538_-537delCGinsAC | upstream_gene_variant | 0.35 | pyrazinamide | |
panD | 4044823 | c.-542G>C | upstream_gene_variant | 0.35 | pyrazinamide | |
glpK | 4138460 | c.1296C>T | synonymous_variant | 0.16 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138472 | c.1284G>T | synonymous_variant | 0.16 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138475 | c.1281C>T | synonymous_variant | 0.17 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
glpK | 4138490 | c.1266G>T | synonymous_variant | 0.17 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138670 | c.1086G>C | synonymous_variant | 0.22 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138679 | c.1075_1077delATGinsGC | frameshift_variant&missense_variant | 0.21 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
isoniazid | Uncertain significance | |||||
glpK | 4138695 | p.Pro354Asp | missense_variant | 0.29 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138718 | c.1038T>C | synonymous_variant | 0.35 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138721 | c.1035G>A | synonymous_variant | 0.33 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
glpK | 4138724 | c.1032A>G | synonymous_variant | 0.35 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138730 | c.1026C>G | synonymous_variant | 0.38 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138757 | c.999A>G | synonymous_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138763 | c.993G>A | synonymous_variant | 0.26 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138769 | c.987G>C | synonymous_variant | 0.24 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139177 | c.579T>C | synonymous_variant | 0.27 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139183 | c.573T>C | synonymous_variant | 0.25 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139186 | c.570G>C | synonymous_variant | 0.25 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | ||||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
glpK | 4139601 | p.Arg52Gln | missense_variant | 0.58 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139611 | p.Ile49Val | missense_variant | 0.47 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139615 | c.141G>A | synonymous_variant | 0.44 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
embC | 4240819 | c.957A>G | synonymous_variant | 0.26 | ethambutol | |
embC | 4240828 | c.966G>C | synonymous_variant | 0.29 | ethambutol | |
embC | 4240831 | c.969T>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4240867 | c.1005T>C | synonymous_variant | 0.3 | ethambutol | |
embC | 4240870 | c.1008T>C | synonymous_variant | 0.3 | ethambutol | |
embC | 4240873 | c.1011C>G | synonymous_variant | 0.3 | ethambutol | |
embC | 4240879 | c.1017G>C | synonymous_variant | 0.3 | ethambutol | |
embC | 4240880 | p.Ala340Thr | missense_variant | 0.3 | ethambutol | Uncertain significance |
embC | 4240885 | c.1023T>C | synonymous_variant | 0.29 | ethambutol | |
embC | 4240897 | c.1035C>G | synonymous_variant | 0.26 | ethambutol | Not assoc w R |
embC | 4240898 | c.1036_1038delCTAinsTG | frameshift_variant&stop_gained | 0.26 | ethambutol | |
embC | 4240903 | c.1041C>G | synonymous_variant | 0.26 | ethambutol | |
embC | 4240911 | p.Ala350Val | missense_variant | 0.27 | ethambutol | |
embC | 4240921 | c.1059C>G | synonymous_variant | 0.3 | ethambutol | |
embC | 4240924 | c.1062C>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4240936 | c.1074A>G | synonymous_variant | 0.25 | ethambutol | |
embC | 4242643 | c.2781C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embA | 4242820 | c.-413G>C | upstream_gene_variant | 0.21 | ethambutol | |
embA | 4242823 | c.-410G>C | upstream_gene_variant | 0.21 | ethambutol | |
embA | 4242832 | c.-401A>C | upstream_gene_variant | 0.21 | ethambutol | |
embA | 4242838 | c.-395C>G | upstream_gene_variant | 0.2 | ethambutol | |
embC | 4242841 | c.2979C>T | synonymous_variant | 0.19 | ethambutol | Not assoc w R - Interim |
embA | 4242844 | c.-389A>G | upstream_gene_variant | 0.19 | ethambutol | |
embA | 4242847 | c.-386C>A | upstream_gene_variant | 0.19 | ethambutol | |
embA | 4245060 | c.1828T>C | synonymous_variant | 0.33 | ethambutol | |
embA | 4245083 | c.1851A>C | synonymous_variant | 0.4 | ethambutol | |
embA | 4245089 | c.1857G>C | synonymous_variant | 0.38 | ethambutol | |
embA | 4245092 | c.1860C>G | synonymous_variant | 0.4 | ethambutol | |
embA | 4245101 | c.1869G>C | synonymous_variant | 0.41 | ethambutol | |
embA | 4245137 | c.1905T>C | synonymous_variant | 0.34 | ethambutol | |
embA | 4245146 | c.1914G>A | synonymous_variant | 0.38 | ethambutol | |
embA | 4245149 | c.1917C>G | synonymous_variant | 0.38 | ethambutol | |
embA | 4245153 | p.Ile641Val | missense_variant | 0.39 | ethambutol | |
embA | 4245182 | c.1950T>C | synonymous_variant | 0.41 | ethambutol | |
embA | 4245189 | c.1957C>T | synonymous_variant | 0.39 | ethambutol | |
embB | 4247839 | c.1326G>C | synonymous_variant | 0.22 | ethambutol | Not assoc w R - Interim |
embB | 4248070 | c.1557T>C | synonymous_variant | 0.2 | ethambutol | |
embB | 4248085 | c.1572T>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4248097 | c.1584C>G | synonymous_variant | 0.29 | ethambutol | |
embB | 4248130 | c.1617G>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4248133 | c.1620C>G | synonymous_variant | 0.27 | ethambutol | |
embB | 4248139 | c.1626C>G | synonymous_variant | 0.26 | ethambutol | |
embB | 4248142 | c.1629T>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4248143 | c.1630T>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.26 | ethambutol | Not assoc w R - Interim |
embB | 4248304 | c.1791G>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4248319 | c.1806A>G | synonymous_variant | 0.3 | ethambutol | |
embB | 4248343 | c.1830G>C | synonymous_variant | 0.3 | ethambutol | |
embB | 4248350 | c.1837T>C | synonymous_variant | 0.3 | ethambutol | |
embB | 4248355 | c.1842A>G | synonymous_variant | 0.31 | ethambutol | |
embB | 4248358 | c.1845C>G | synonymous_variant | 0.33 | ethambutol | |
embB | 4248361 | c.1848A>C | synonymous_variant | 0.33 | ethambutol | |
embB | 4248362 | p.Ser617Ala | missense_variant | 0.33 | ethambutol | |
embB | 4248373 | c.1860C>G | synonymous_variant | 0.33 | ethambutol | |
embB | 4248386 | c.1873C>A | synonymous_variant | 0.33 | ethambutol | |
embB | 4249498 | c.2985G>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4249521 | p.Ala1003Val | missense_variant | 0.24 | ethambutol | |
embB | 4249525 | c.3012T>C | synonymous_variant | 0.24 | ethambutol | Not assoc w R - Interim |
embB | 4249529 | p.Ile1006Val | missense_variant | 0.24 | ethambutol | |
embB | 4249532 | p.Ala1007Thr | missense_variant | 0.23 | ethambutol | Uncertain significance |
embB | 4249537 | c.3024A>G | synonymous_variant | 0.23 | ethambutol | |
embB | 4249543 | c.3030G>C | synonymous_variant | 0.23 | ethambutol | |
embB | 4249546 | c.3033G>A | synonymous_variant | 0.23 | ethambutol | |
embB | 4249558 | c.3045A>C | synonymous_variant | 0.22 | ethambutol | |
ubiA | 4269820 | p.Val5Gly | missense_variant | 1.0 | ethambutol | Uncertain significance |
whiB6 | 4338732 | c.-211C>T | upstream_gene_variant | 1.0 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
gid | 4408156 | p.Leu16Arg | missense_variant | 1.0 | streptomycin | Not assoc w R |