Run ID: SRR12006061
Sample name:
Date: 03-04-2023 05:45:40
Number of reads: 8016504
Percentage reads mapped: 99.91
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7581 | p.Asp94Ser | missense_variant | 0.13 |
rpoB | 759803 | c.-4C>T | upstream_gene_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
PPE35 | 2170598 | c.15G>A | synonymous_variant | 1.0 |