TB-Profiler result

Run: SRR5007188
Summary

Run ID: SRR5007188

Sample name:

Date: 04-04-2023 07:52:19

Number of reads: 97414

Percentage reads mapped: 4.56

Strain: lineage4

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 0.96
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 1.0 streptomycin
embB 4247431 p.Met306Ile missense_variant 0.33 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5671 c.432C>T synonymous_variant 1.0
gyrA 6700 c.-602T>C upstream_gene_variant 0.4
gyrA 6703 c.-599G>C upstream_gene_variant 0.4
gyrA 6709 c.-593A>G upstream_gene_variant 0.4
gyrA 6712 c.-590G>C upstream_gene_variant 0.4
gyrA 6949 c.-353A>G upstream_gene_variant 1.0
gyrA 6952 c.-350C>G upstream_gene_variant 1.0
gyrA 6967 c.-335T>C upstream_gene_variant 1.0
gyrA 6973 c.-329G>C upstream_gene_variant 1.0
gyrA 6982 c.-320A>C upstream_gene_variant 1.0
gyrA 7007 c.-295C>T upstream_gene_variant 0.67
gyrA 7010 c.-292C>T upstream_gene_variant 0.67
gyrB 7023 p.Leu595Gln missense_variant 0.67
gyrA 7033 c.-269G>C upstream_gene_variant 0.67
gyrB 7051 p.Glu604Asp missense_variant 0.6
gyrA 7066 c.-236G>C upstream_gene_variant 0.5
gyrA 7334 c.33G>C synonymous_variant 1.0
gyrA 7335 p.Leu12Val missense_variant 1.0
gyrA 7347 p.Glu16Gln missense_variant 0.67
gyrA 7355 c.54T>C synonymous_variant 0.67
gyrA 7361 c.60C>T synonymous_variant 0.75
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.5
gyrA 7394 c.93T>C synonymous_variant 0.6
gyrA 7406 c.105G>C synonymous_variant 0.6
gyrA 7427 c.126G>C synonymous_variant 0.5
gyrA 7442 c.141G>C synonymous_variant 0.6
gyrA 7451 c.150C>G synonymous_variant 0.57
gyrA 7457 c.156T>C synonymous_variant 0.57
gyrA 7475 c.174A>G synonymous_variant 0.5
gyrA 7480 p.Phe60Tyr missense_variant 0.5
gyrA 7484 c.183T>C synonymous_variant 0.5
gyrA 7514 c.213C>G synonymous_variant 0.6
gyrA 7523 c.222C>A synonymous_variant 0.6
gyrA 7532 c.231T>C synonymous_variant 0.6
gyrA 7541 c.240C>G synonymous_variant 0.8
gyrA 7547 c.246C>T synonymous_variant 0.8
gyrA 7562 c.261C>T synonymous_variant 0.8
gyrA 7571 c.270G>C synonymous_variant 0.83
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7595 c.294C>G synonymous_variant 0.8
gyrA 7601 c.300C>G synonymous_variant 1.0
gyrA 7607 c.306C>G synonymous_variant 1.0
gyrA 7622 c.321C>T synonymous_variant 1.0
gyrA 7625 c.324G>C synonymous_variant 1.0
gyrA 7631 c.330G>C synonymous_variant 1.0
gyrA 7637 c.336C>G synonymous_variant 1.0
gyrA 7658 c.357A>G synonymous_variant 1.0
gyrA 7664 c.363T>C synonymous_variant 1.0
gyrA 7670 c.369A>G synonymous_variant 1.0
gyrA 7676 c.375G>C synonymous_variant 1.0
gyrA 7683 c.382_384delAGGinsCGC synonymous_variant 1.0
gyrA 7694 c.393A>G synonymous_variant 1.0
gyrA 7697 c.396C>A synonymous_variant 1.0
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 1.0
gyrA 7715 c.414G>C synonymous_variant 1.0
gyrA 7721 c.420G>A synonymous_variant 1.0
gyrA 7725 c.424C>T synonymous_variant 1.0
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 1.0
gyrA 7784 c.483A>G synonymous_variant 1.0
gyrA 7793 c.492G>C synonymous_variant 1.0
gyrA 7796 c.495G>C synonymous_variant 1.0
gyrA 7799 c.498A>G synonymous_variant 1.0
gyrA 7814 c.513C>G synonymous_variant 1.0
gyrA 8054 c.753T>C synonymous_variant 1.0
gyrA 8057 c.756A>G synonymous_variant 1.0
gyrA 8069 c.768T>C synonymous_variant 1.0
gyrA 8078 c.777A>G synonymous_variant 0.67
gyrA 8090 c.789C>A synonymous_variant 0.67
gyrA 8096 c.795T>A synonymous_variant 0.67
gyrA 8099 c.798T>C synonymous_variant 0.5
gyrA 8111 c.810G>C synonymous_variant 0.67
gyrA 8121 c.820_822delTTGinsCTA synonymous_variant 0.67
gyrA 8129 c.828T>C synonymous_variant 0.67
gyrA 8135 c.834C>G synonymous_variant 0.67
gyrA 8156 c.855T>C synonymous_variant 0.67
gyrA 8168 c.867A>G synonymous_variant 0.67
gyrA 8177 c.876A>C synonymous_variant 0.6
gyrA 8189 c.888G>C synonymous_variant 0.6
gyrA 8198 c.897T>C synonymous_variant 0.6
gyrA 8453 c.1152A>C synonymous_variant 1.0
gyrA 8459 c.1158G>A synonymous_variant 1.0
gyrA 8462 c.1161A>C synonymous_variant 1.0
gyrA 8465 c.1164C>G synonymous_variant 1.0
gyrA 8471 c.1170T>C synonymous_variant 1.0
gyrA 8472 c.1171C>T synonymous_variant 1.0
gyrA 8480 c.1179C>A synonymous_variant 1.0
gyrA 8486 c.1185T>C synonymous_variant 1.0
gyrA 8504 c.1203G>C synonymous_variant 1.0
gyrA 8516 c.1215T>C synonymous_variant 0.75
gyrA 8519 c.1218A>C synonymous_variant 0.75
gyrA 8520 c.1219C>T synonymous_variant 0.75
gyrA 8528 c.1227G>C synonymous_variant 0.8
gyrA 8531 c.1230G>C synonymous_variant 0.8
gyrA 8543 c.1242C>G synonymous_variant 0.8
gyrA 8546 c.1245T>C synonymous_variant 0.83
gyrA 8553 c.1252C>A synonymous_variant 0.83
gyrA 8561 c.1260A>C synonymous_variant 0.83
gyrA 8588 c.1287G>A synonymous_variant 0.8
gyrA 8603 c.1302A>G synonymous_variant 0.6
gyrA 8619 c.1318T>C synonymous_variant 0.5
gyrA 8624 c.1323G>C synonymous_variant 0.4
gyrA 8636 c.1335A>C synonymous_variant 0.4
gyrA 8642 c.1341A>G synonymous_variant 0.4
gyrA 8987 c.1686C>A synonymous_variant 0.33
gyrA 8990 c.1689C>G synonymous_variant 0.33
gyrA 8996 c.1695T>C synonymous_variant 0.43
gyrA 8998 p.Leu566Trp missense_variant 0.43
gyrA 9017 c.1716C>G synonymous_variant 0.43
gyrA 9023 c.1722A>G synonymous_variant 0.5
gyrA 9029 c.1728T>C synonymous_variant 0.5
gyrA 9032 c.1731T>C synonymous_variant 0.5
gyrA 9050 p.Asp583Glu missense_variant 0.5
gyrA 9051 c.1750T>C synonymous_variant 0.5
gyrA 9056 c.1755C>G synonymous_variant 0.5
gyrA 9062 c.1761C>G synonymous_variant 0.5
gyrA 9065 c.1764C>G synonymous_variant 0.5
gyrA 9068 c.1767G>C synonymous_variant 0.5
gyrA 9071 c.1770G>C synonymous_variant 0.5
gyrA 9080 c.1779G>T synonymous_variant 0.5
gyrA 9089 c.1788G>C synonymous_variant 0.43
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.5
gyrA 9104 c.1803C>G synonymous_variant 0.6
gyrA 9119 c.1818A>G synonymous_variant 0.5
gyrA 9122 c.1821C>A synonymous_variant 0.5
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9267 p.Asn656Gly missense_variant 0.67
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9560 c.2259C>G synonymous_variant 0.5
gyrA 9566 c.2265C>T synonymous_variant 0.6
gyrA 9572 c.2271C>T synonymous_variant 0.6
gyrA 9585 c.2284T>C synonymous_variant 0.5
gyrA 9590 c.2289T>C synonymous_variant 0.5
gyrA 9593 c.2292G>C synonymous_variant 0.5
gyrA 9602 c.2301T>C synonymous_variant 0.5
gyrA 9611 p.Asp770Glu missense_variant 0.6
gyrA 9626 c.2325T>C synonymous_variant 0.75
gyrA 9629 c.2328C>G synonymous_variant 0.75
gyrA 9630 p.Val777Ile missense_variant 0.75
gyrA 9635 c.2334T>C synonymous_variant 0.75
gyrA 9638 c.2337C>G synonymous_variant 0.75
gyrA 9644 c.2343T>G synonymous_variant 0.75
gyrA 9650 c.2349G>C synonymous_variant 0.75
gyrA 9656 c.2355C>G synonymous_variant 0.75
gyrA 9665 c.2364A>C synonymous_variant 0.75
gyrA 9666 p.Arg789Gly missense_variant 0.6
gyrA 9674 c.2373T>C synonymous_variant 0.6
gyrA 9701 c.2400T>C synonymous_variant 0.67
gyrA 9704 c.2403T>G synonymous_variant 0.67
gyrA 9708 c.2407T>C synonymous_variant 0.67
fgd1 490998 c.216T>C synonymous_variant 0.5
fgd1 491001 c.219G>C synonymous_variant 0.5
fgd1 491007 c.225G>C synonymous_variant 0.5
fgd1 491013 c.231C>G synonymous_variant 0.5
fgd1 491043 c.261T>G synonymous_variant 0.5
fgd1 491100 c.318C>T synonymous_variant 0.5
fgd1 491106 c.324T>C synonymous_variant 0.5
fgd1 491121 c.339A>G synonymous_variant 0.5
fgd1 491130 c.348C>G synonymous_variant 0.67
fgd1 491453 p.Gly224Asp missense_variant 1.0
fgd1 491472 c.690A>G synonymous_variant 1.0
fgd1 491487 c.705C>T synonymous_variant 0.67
fgd1 491496 c.714C>T synonymous_variant 0.67
fgd1 491499 c.717G>C synonymous_variant 0.67
fgd1 491500 p.Glu240Lys missense_variant 0.67
fgd1 491508 c.726A>G synonymous_variant 0.67
fgd1 491509 c.727T>C synonymous_variant 0.67
fgd1 491512 p.Asn244Glu missense_variant 0.67
fgd1 491526 c.744T>C synonymous_variant 0.67
fgd1 491535 c.753G>C synonymous_variant 0.67
fgd1 491542 c.760T>C synonymous_variant 0.67
fgd1 491547 c.765A>C synonymous_variant 0.67
fgd1 491550 c.768T>C synonymous_variant 0.67
fgd1 491553 c.771G>A synonymous_variant 0.67
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575561 p.Met72Val missense_variant 0.67
mshA 575569 c.222A>G synonymous_variant 0.67
mshA 575571 p.Ser75Thr missense_variant 0.67
mshA 575576 c.229C>T synonymous_variant 0.67
mshA 575581 c.234C>T synonymous_variant 0.67
mshA 575587 c.240C>G synonymous_variant 0.67
mshA 575590 c.243T>C synonymous_variant 0.67
mshA 575623 c.276C>G synonymous_variant 0.67
mshA 575629 c.282A>G synonymous_variant 0.67
mshA 575632 c.285G>C synonymous_variant 0.5
mshA 575635 c.288A>C synonymous_variant 0.5
mshA 575638 c.291T>C synonymous_variant 0.5
mshA 575641 c.294A>G synonymous_variant 0.5
mshA 575647 c.300G>C synonymous_variant 0.5
mshA 575649 p.Val101Ala missense_variant 0.5
mshA 575659 c.312A>G synonymous_variant 0.6
mshA 575662 c.315C>G synonymous_variant 0.6
mshA 575665 c.318G>A synonymous_variant 0.6
mshA 575674 c.327G>C synonymous_variant 0.6
mshA 575695 c.348C>G synonymous_variant 0.67
mshA 575770 c.423G>A synonymous_variant 0.67
mshA 575771 p.Val142Ser missense_variant 0.67
mshA 575779 c.432A>G synonymous_variant 0.67
mshA 575782 c.435G>C synonymous_variant 1.0
mshA 575884 c.537G>C synonymous_variant 0.5
mshA 575887 c.540G>C synonymous_variant 0.5
mshA 575893 c.546C>G synonymous_variant 0.5
mshA 575896 c.549G>C synonymous_variant 0.5
ccsA 620226 c.336G>A synonymous_variant 0.5
ccsA 620245 c.355T>C synonymous_variant 0.5
ccsA 620249 p.Ser120Cys missense_variant 0.5
ccsA 620254 c.364_366delCTCinsTTG synonymous_variant 0.5
ccsA 620265 c.375C>G synonymous_variant 0.5
ccsA 620268 c.378G>C synonymous_variant 0.5
ccsA 620283 c.393T>C synonymous_variant 0.67
ccsA 620284 p.Ala132Pro missense_variant 0.67
ccsA 620288 p.Arg133Gln missense_variant 0.67
ccsA 620295 c.405G>T synonymous_variant 0.67
ccsA 620310 c.420C>T synonymous_variant 0.67
ccsA 620317 p.Val143Leu missense_variant 0.67
rpoB 760091 c.285G>C synonymous_variant 0.6
rpoB 760101 c.295T>C synonymous_variant 0.6
rpoB 760112 c.306T>C synonymous_variant 0.6
rpoB 760118 c.312T>G synonymous_variant 0.6
rpoB 760121 c.315T>C synonymous_variant 0.6
rpoB 760130 p.Asp108Glu missense_variant 0.6
rpoB 760139 c.333A>G synonymous_variant 0.6
rpoB 760142 c.336C>G synonymous_variant 0.8
rpoB 760181 c.375T>C synonymous_variant 0.83
rpoB 760184 c.378A>G synonymous_variant 0.83
rpoB 760196 c.390C>G synonymous_variant 0.86
rpoB 760223 c.417T>C synonymous_variant 0.88
rpoB 760235 c.429T>C synonymous_variant 0.71
rpoB 760283 c.477G>C synonymous_variant 0.75
rpoB 760298 c.492G>C synonymous_variant 0.71
rpoB 760307 c.501T>C synonymous_variant 0.71
rpoB 760310 c.504G>C synonymous_variant 0.83
rpoB 760328 c.522G>C synonymous_variant 0.83
rpoB 760331 c.525G>C synonymous_variant 0.83
rpoB 760340 c.534G>T synonymous_variant 0.83
rpoB 760361 c.555T>C synonymous_variant 0.67
rpoB 760370 c.564C>G synonymous_variant 0.5
rpoB 760376 p.Asp190Glu missense_variant 0.5
rpoB 760380 p.Thr192Leu missense_variant 0.5
rpoB 760591 p.Val262Ala missense_variant 0.4
rpoB 760611 c.805T>C synonymous_variant 0.5
rpoB 760634 c.828T>C synonymous_variant 0.5
rpoB 760646 c.840C>G synonymous_variant 0.4
rpoB 760655 c.849A>G synonymous_variant 0.4
rpoB 760661 c.855A>C synonymous_variant 0.4
rpoB 760670 c.864G>C synonymous_variant 0.4
rpoB 760982 c.1176G>C synonymous_variant 1.0
rpoB 760985 c.1179G>C synonymous_variant 1.0
rpoB 760991 c.1185G>C synonymous_variant 1.0
rpoB 761006 c.1200C>G synonymous_variant 0.67
rpoB 761015 c.1209G>C synonymous_variant 0.5
rpoB 761021 c.1215G>C synonymous_variant 0.5
rpoB 761027 c.1221A>G synonymous_variant 0.5
rpoB 761036 c.1230G>C synonymous_variant 0.5
rpoB 761037 c.1231T>C synonymous_variant 0.5
rpoB 761057 c.1251G>C synonymous_variant 0.6
rpoB 761102 c.1296A>G synonymous_variant 0.67
rpoB 761129 c.1323G>C synonymous_variant 0.6
rpoB 761132 c.1326G>T synonymous_variant 0.6
rpoB 761133 c.1327T>C synonymous_variant 0.6
rpoB 761150 c.1344A>C synonymous_variant 0.67
rpoB 761153 c.1347G>C synonymous_variant 0.67
rpoB 761165 c.1359G>C synonymous_variant 1.0
rpoB 761180 c.1374A>C synonymous_variant 1.0
rpoB 761189 c.1383T>C synonymous_variant 1.0
rpoB 761195 c.1389G>C synonymous_variant 1.0
rpoB 761207 c.1401C>T synonymous_variant 1.0
rpoB 761213 c.1407G>C synonymous_variant 1.0
rpoB 761219 c.1413G>C synonymous_variant 1.0
rpoB 761249 c.1443A>G synonymous_variant 1.0
rpoB 761255 c.1449T>G synonymous_variant 1.0
rpoB 761261 c.1455G>T synonymous_variant 1.0
rpoB 761306 c.1500C>G synonymous_variant 1.0
rpoB 761312 c.1506G>C synonymous_variant 1.0
rpoB 761327 c.1521A>G synonymous_variant 1.0
rpoB 761330 c.1524G>C synonymous_variant 1.0
rpoB 761354 c.1548C>T synonymous_variant 1.0
rpoB 761360 c.1554T>C synonymous_variant 1.0
rpoB 761362 p.Ser519Thr missense_variant 1.0
rpoB 761373 p.Val523His missense_variant 0.75
rpoB 761408 c.1602G>C synonymous_variant 0.5
rpoB 761414 c.1608A>G synonymous_variant 0.5
rpoB 761423 c.1617T>C synonymous_variant 0.5
rpoB 761435 c.1629T>C synonymous_variant 0.5
rpoB 761438 c.1632G>C synonymous_variant 0.5
rpoB 761439 p.Asp545Lys missense_variant 0.5
rpoB 761444 c.1638T>C synonymous_variant 0.5
rpoB 761447 c.1641C>G synonymous_variant 0.5
rpoB 761452 p.Val549Glu missense_variant 0.5
rpoB 761457 p.Pro551Ser missense_variant 0.5
rpoB 761477 c.1671C>G synonymous_variant 0.5
rpoB 761492 c.1686G>C synonymous_variant 0.5
rpoB 761537 c.1731C>G synonymous_variant 0.4
rpoB 761559 p.Thr585Ala missense_variant 0.5
rpoB 761570 c.1764T>C synonymous_variant 0.5
rpoB 761573 c.1767C>G synonymous_variant 0.5
rpoB 761579 c.1773G>C synonymous_variant 0.5
rpoB 761588 c.1782C>T synonymous_variant 0.5
rpoB 761606 c.1800C>G synonymous_variant 0.5
rpoB 761615 c.1809A>C synonymous_variant 0.5
rpoB 761636 c.1830G>T synonymous_variant 0.67
rpoB 761645 c.1839C>G synonymous_variant 0.67
rpoB 761648 c.1842T>C synonymous_variant 0.67
rpoB 761657 c.1851C>G synonymous_variant 1.0
rpoB 761727 p.Ser641Gly missense_variant 1.0
rpoB 761728 c.1923dupC frameshift_variant 1.0
rpoB 761732 c.1926C>G synonymous_variant 1.0
rpoB 761735 c.1929C>G synonymous_variant 1.0
rpoB 761747 c.1941G>C synonymous_variant 1.0
rpoB 761750 c.1944G>C synonymous_variant 1.0
rpoB 761791 p.Arg662His missense_variant 1.0
rpoB 761813 c.2007T>C synonymous_variant 1.0
rpoB 761815 p.Ala670Glu missense_variant 1.0
rpoB 761954 c.2148C>G synonymous_variant 1.0
rpoB 762008 c.2202C>T synonymous_variant 0.67
rpoB 762014 c.2208C>T synonymous_variant 0.67
rpoB 762017 c.2211A>G synonymous_variant 0.71
rpoB 762053 c.2247T>C synonymous_variant 0.71
rpoB 762062 c.2256T>C synonymous_variant 0.71
rpoB 762065 c.2259T>C synonymous_variant 0.71
rpoB 762083 c.2277T>C synonymous_variant 0.78
rpoB 762086 c.2280G>C synonymous_variant 0.75
rpoB 762101 c.2295C>G synonymous_variant 0.78
rpoB 762114 p.Ile770Val missense_variant 0.75
rpoB 762131 c.2325C>G synonymous_variant 0.71
rpoB 762140 c.2334G>C synonymous_variant 0.71
rpoB 762143 c.2337T>C synonymous_variant 0.71
rpoB 762149 c.2343G>C synonymous_variant 0.83
rpoB 762167 c.2361T>C synonymous_variant 0.75
rpoB 762176 c.2370T>C synonymous_variant 0.8
rpoB 762185 c.2379G>C synonymous_variant 0.83
rpoB 762206 c.2400C>G synonymous_variant 0.71
rpoB 762233 c.2427G>C synonymous_variant 0.5
rpoB 762246 c.2440C>T synonymous_variant 0.4
rpoB 762254 c.2448T>G synonymous_variant 0.4
rpoB 762257 c.2451C>G synonymous_variant 0.4
rpoB 762266 c.2460T>C synonymous_variant 0.4
rpoB 762284 c.2478G>C synonymous_variant 0.4
rpoB 762293 c.2487T>C synonymous_variant 0.43
rpoB 762317 c.2511A>G synonymous_variant 0.57
rpoB 762329 c.2523G>C synonymous_variant 0.5
rpoB 762338 c.2532T>C synonymous_variant 0.38
rpoB 762347 c.2541T>C synonymous_variant 0.38
rpoB 762362 p.Glu852Asp missense_variant 0.38
rpoB 762369 c.2563T>C synonymous_variant 0.38
rpoC 762398 c.-972T>C upstream_gene_variant 0.56
rpoC 762401 c.-969G>C upstream_gene_variant 0.56
rpoC 762404 c.-966T>C upstream_gene_variant 0.56
rpoC 762410 c.-960T>C upstream_gene_variant 0.67
rpoC 762416 c.-954A>G upstream_gene_variant 0.67
rpoC 762419 c.-951C>G upstream_gene_variant 0.67
rpoC 762434 c.-936T>C upstream_gene_variant 0.7
rpoC 762449 c.-921C>A upstream_gene_variant 0.78
rpoC 762467 c.-903C>T upstream_gene_variant 0.75
rpoC 762488 c.-882G>C upstream_gene_variant 0.83
rpoB 762489 p.Val895Gln missense_variant 0.83
rpoC 762509 c.-861T>G upstream_gene_variant 0.83
rpoB 762510 p.Ala902Pro missense_variant 0.83
rpoC 762521 c.-849C>T upstream_gene_variant 0.83
rpoC 762533 c.-837T>C upstream_gene_variant 0.75
rpoC 762536 c.-834T>C upstream_gene_variant 0.75
rpoC 762537 c.-833T>C upstream_gene_variant 0.75
rpoB 762813 p.Met1003Val missense_variant 0.5
rpoC 762818 c.-552C>G upstream_gene_variant 0.5
rpoC 762827 c.-543G>C upstream_gene_variant 0.67
rpoC 762857 c.-513C>G upstream_gene_variant 0.75
rpoC 762860 c.-510G>C upstream_gene_variant 0.75
rpoC 762863 c.-507T>C upstream_gene_variant 0.75
rpoC 762926 c.-444C>T upstream_gene_variant 0.83
rpoC 762929 c.-441G>C upstream_gene_variant 0.83
rpoC 762989 c.-381G>C upstream_gene_variant 1.0
rpoC 762995 c.-375G>T upstream_gene_variant 0.86
rpoC 763013 c.-357C>G upstream_gene_variant 0.83
rpoC 763025 c.-345C>T upstream_gene_variant 0.83
rpoC 763028 c.-342T>C upstream_gene_variant 0.8
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.8
rpoC 763040 c.-330C>G upstream_gene_variant 0.8
rpoC 763070 c.-300T>C upstream_gene_variant 0.83
rpoC 763085 c.-285C>G upstream_gene_variant 0.83
rpoC 763115 c.-255T>C upstream_gene_variant 0.8
rpoC 763136 c.-234C>T upstream_gene_variant 0.75
rpoC 763148 c.-222G>C upstream_gene_variant 1.0
rpoC 763158 c.-212C>T upstream_gene_variant 1.0
rpoC 763166 c.-204A>G upstream_gene_variant 1.0
rpoC 763190 c.-180C>T upstream_gene_variant 1.0
rpoC 763402 c.33C>G synonymous_variant 0.6
rpoC 763411 c.42T>G synonymous_variant 0.6
rpoC 763414 c.45T>C synonymous_variant 0.6
rpoC 763441 c.72C>T synonymous_variant 0.8
rpoC 763444 c.75T>C synonymous_variant 0.8
rpoC 763456 c.87A>G synonymous_variant 0.8
rpoC 763486 c.117T>G synonymous_variant 0.8
rpoC 763528 c.159G>A synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763570 c.201G>C synonymous_variant 0.67
rpoC 763573 c.204G>C synonymous_variant 0.67
rpoC 763594 c.225C>T synonymous_variant 0.83
rpoC 763603 c.234C>T synonymous_variant 0.83
rpoC 763636 c.267T>C synonymous_variant 0.71
rpoC 763660 c.291T>G synonymous_variant 0.7
rpoC 763675 c.306C>G synonymous_variant 0.7
rpoC 763696 c.327T>C synonymous_variant 0.67
rpoC 763702 c.333C>G synonymous_variant 0.67
rpoC 763717 c.348T>C synonymous_variant 0.7
rpoC 763723 c.354G>C synonymous_variant 0.73
rpoC 763732 c.363C>G synonymous_variant 0.62
rpoC 763741 c.372C>T synonymous_variant 0.67
rpoC 763744 c.375G>C synonymous_variant 0.6
rpoC 763765 c.396T>C synonymous_variant 0.56
rpoC 763774 c.405G>C synonymous_variant 0.6
rpoC 763807 c.438T>C synonymous_variant 0.38
rpoC 763816 c.447C>G synonymous_variant 0.29
rpoC 763835 p.Ala156Met missense_variant 0.29
rpoC 763987 c.618C>T synonymous_variant 0.29
rpoC 763991 p.Ile208Leu missense_variant 0.29
rpoC 763996 c.627T>C synonymous_variant 0.29
rpoC 764002 c.633C>G synonymous_variant 0.29
rpoC 764005 c.636G>C synonymous_variant 0.29
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.29
rpoC 764032 p.Asp221Glu missense_variant 0.25
rpoC 764040 p.Ser224Thr missense_variant 0.25
rpoC 764044 c.675T>C synonymous_variant 0.25
rpoC 764083 c.714A>G synonymous_variant 0.4
rpoC 764098 c.729A>G synonymous_variant 0.43
rpoC 764101 c.732C>G synonymous_variant 0.43
rpoC 764102 p.Val245Ile missense_variant 0.43
rpoC 764112 p.Tyr248Phe missense_variant 0.43
rpoC 764116 c.747C>T synonymous_variant 0.38
rpoC 764188 c.819A>G synonymous_variant 0.4
rpoC 764195 p.Ser276Ile missense_variant 0.4
rpoC 764203 c.834G>C synonymous_variant 0.4
rpoC 764206 c.837T>C synonymous_variant 0.4
rpoC 764215 c.846A>G synonymous_variant 0.4
rpoC 764236 c.867G>A synonymous_variant 0.5
rpoC 764248 c.879C>G synonymous_variant 0.5
rpoC 764257 c.888G>C synonymous_variant 0.5
rpoC 764266 c.897T>C synonymous_variant 0.67
rpoC 764269 c.900G>C synonymous_variant 0.67
rpoC 764272 c.903G>C synonymous_variant 0.5
rpoC 764278 c.909A>G synonymous_variant 0.5
rpoC 764353 c.984G>C synonymous_variant 0.67
rpoC 764365 c.996C>T synonymous_variant 1.0
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 1.0
rpoC 764405 c.1036A>C synonymous_variant 0.5
rpoC 764419 c.1050C>G synonymous_variant 0.5
rpoC 764428 c.1059G>C synonymous_variant 0.5
rpoC 764431 c.1062G>C synonymous_variant 0.5
rpoC 764434 c.1065A>G synonymous_variant 0.5
rpoC 764446 c.1077T>C synonymous_variant 0.67
rpoC 764449 c.1080G>C synonymous_variant 0.67
rpoC 764452 c.1083T>C synonymous_variant 0.67
rpoC 764458 c.1089G>C synonymous_variant 0.67
rpoC 764461 c.1092A>G synonymous_variant 0.67
rpoC 764489 c.1120C>T synonymous_variant 0.67
rpoC 764752 c.1383G>C synonymous_variant 0.8
rpoC 764764 c.1395T>C synonymous_variant 0.5
rpoC 764809 c.1440C>T synonymous_variant 0.5
rpoC 764815 c.1446A>G synonymous_variant 0.5
rpoC 764827 c.1458G>C synonymous_variant 0.38
rpoC 764858 c.1489T>C synonymous_variant 0.29
rpoC 764888 c.1519T>C synonymous_variant 0.33
rpoC 764911 c.1542A>G synonymous_variant 0.67
rpoC 764932 c.1563C>A synonymous_variant 0.67
rpoC 764935 c.1566T>C synonymous_variant 0.67
rpoC 764948 c.1579T>C synonymous_variant 0.6
rpoC 764968 c.1599T>C synonymous_variant 0.5
rpoC 764995 c.1626C>G synonymous_variant 0.4
rpoC 765019 c.1650A>G synonymous_variant 0.5
rpoC 765034 c.1665T>C synonymous_variant 0.33
rpoC 765040 c.1671T>C synonymous_variant 0.33
rpoC 765041 c.1672T>C synonymous_variant 0.33
rpoC 765047 c.1678T>C synonymous_variant 0.29
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.29
rpoC 765073 c.1704G>C synonymous_variant 0.29
rpoC 765076 c.1707A>G synonymous_variant 0.29
rpoC 765079 c.1710T>G synonymous_variant 0.29
rpoC 765082 c.1713G>C synonymous_variant 0.29
rpoC 765089 c.1720T>C synonymous_variant 0.29
rpoC 765404 p.Leu679Val missense_variant 0.67
rpoC 765409 c.2040T>C synonymous_variant 0.6
rpoC 765421 c.2052C>G synonymous_variant 0.6
rpoC 765478 c.2109T>C synonymous_variant 0.62
rpoC 765499 c.2130C>G synonymous_variant 0.62
rpoC 765510 p.Asp714Val missense_variant 0.22
rpoC 765529 c.2160C>T synonymous_variant 0.7
rpoC 765541 c.2172C>G synonymous_variant 0.67
rpoC 765553 c.2184C>T synonymous_variant 0.67
rpoC 765556 c.2187G>C synonymous_variant 0.67
rpoC 765559 c.2190G>C synonymous_variant 0.71
rpoC 765580 c.2211G>C synonymous_variant 0.88
rpoC 765613 p.His748Gln missense_variant 1.0
rpoC 765625 c.2256C>G synonymous_variant 1.0
rpoC 765631 p.Asp754Glu missense_variant 1.0
rpoC 765700 c.2331T>C synonymous_variant 1.0
rpoC 765734 c.2365T>C synonymous_variant 0.83
rpoC 765739 c.2370G>T synonymous_variant 0.8
rpoC 765751 c.2382C>G synonymous_variant 0.71
rpoC 765753 p.Asp795Ala missense_variant 0.71
rpoC 765772 c.2403C>G synonymous_variant 0.75
rpoC 765784 c.2415C>G synonymous_variant 0.7
rpoC 765787 c.2418C>T synonymous_variant 0.7
rpoC 765793 c.2424C>G synonymous_variant 0.7
rpoC 765796 c.2427C>T synonymous_variant 0.7
rpoC 765811 c.2442T>C synonymous_variant 0.7
rpoC 765814 c.2445A>G synonymous_variant 0.7
rpoC 765826 c.2457T>C synonymous_variant 0.7
rpoC 765835 c.2466C>T synonymous_variant 0.67
rpoC 765850 c.2481G>C synonymous_variant 0.67
rpoC 765883 c.2514C>G synonymous_variant 0.56
rpoC 765886 c.2517C>G synonymous_variant 0.56
rpoC 765892 c.2523T>C synonymous_variant 0.6
rpoC 765937 c.2568T>C synonymous_variant 0.55
rpoC 765967 c.2598C>T synonymous_variant 0.57
rpoC 765982 c.2613C>G synonymous_variant 0.6
rpoC 765994 c.2625A>T synonymous_variant 0.57
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.62
rpoC 766021 c.2652G>C synonymous_variant 0.67
rpoC 766027 c.2658G>C synonymous_variant 0.62
rpoC 766030 c.2661C>G synonymous_variant 0.62
rpoC 766043 p.Gln892Glu missense_variant 0.47
rpoC 766054 c.2685C>G synonymous_variant 0.47
rpoC 766082 p.Ala905Gln missense_variant 0.27
rpoC 766096 c.2727G>C synonymous_variant 0.22
rpoC 766129 c.2760C>G synonymous_variant 0.22
rpoC 766135 c.2766G>A synonymous_variant 0.22
rpoC 766141 c.2772C>T synonymous_variant 0.22
rpoC 766142 c.2773C>T synonymous_variant 0.22
rpoC 766185 p.Glu939Ala missense_variant 0.22
rpoC 766189 c.2820T>C synonymous_variant 0.29
rpoC 766192 c.2823T>C synonymous_variant 0.29
rpoC 766193 p.Gln942Glu missense_variant 0.29
rpoC 766204 c.2835C>T synonymous_variant 0.29
rpoC 766207 c.2838T>C synonymous_variant 0.33
rpoC 766216 c.2847T>C synonymous_variant 0.33
rpoC 766219 p.Asp950Glu missense_variant 0.33
rpoC 766222 c.2853T>C synonymous_variant 0.33
rpoC 766226 c.2857T>C synonymous_variant 0.33
rpoC 766231 c.2862T>G synonymous_variant 0.4
rpoC 766234 c.2865T>C synonymous_variant 0.4
rpoC 766237 c.2868T>C synonymous_variant 0.4
rpoC 766240 c.2871T>C synonymous_variant 0.4
rpoC 766243 c.2874C>G synonymous_variant 0.4
rpoC 766258 c.2889T>C synonymous_variant 0.57
rpoC 766273 c.2904T>C synonymous_variant 0.43
rpoC 766274 p.Ala969Thr missense_variant 0.43
rpoC 766280 p.Ser971Gly missense_variant 0.43
rpoC 766288 c.2919C>G synonymous_variant 0.5
rpoC 766303 c.2934C>T synonymous_variant 0.5
rpoC 766312 c.2943T>G synonymous_variant 0.62
rpoC 766327 c.2958C>A synonymous_variant 0.62
rpoC 766345 c.2976T>C synonymous_variant 0.75
rpoC 766348 c.2979A>G synonymous_variant 0.75
rpoC 766357 c.2988C>T synonymous_variant 0.78
rpoC 766363 c.2994G>C synonymous_variant 0.78
rpoC 766381 c.3012C>T synonymous_variant 0.78
rpoC 766384 c.3015A>G synonymous_variant 0.78
rpoC 766390 c.3021C>T synonymous_variant 0.78
rpoC 766408 c.3039C>G synonymous_variant 0.67
rpoC 766411 c.3042C>G synonymous_variant 0.67
rpoC 766426 c.3057C>T synonymous_variant 1.0
rpoC 766447 c.3078T>C synonymous_variant 1.0
rpoC 766462 c.3093G>C synonymous_variant 1.0
rpoC 766483 c.3114G>C synonymous_variant 1.0
rpoC 766484 p.Val1039Ile missense_variant 1.0
rpoC 766492 c.3123T>C synonymous_variant 1.0
rpoC 766573 c.3204T>C synonymous_variant 0.5
rpoC 766630 c.3261G>C synonymous_variant 0.67
rpoC 766657 c.3288A>G synonymous_variant 0.67
rpoC 766660 c.3291G>C synonymous_variant 0.67
rpoC 766672 c.3303T>C synonymous_variant 0.67
rpoC 766673 p.Gly1102Asn missense_variant 0.67
rpoC 766726 c.3357T>C synonymous_variant 1.0
rpoC 766738 c.3369G>C synonymous_variant 1.0
rpoC 766765 c.3396A>C synonymous_variant 1.0
rpoC 766774 c.3405T>C synonymous_variant 1.0
rpoC 766801 c.3432C>G synonymous_variant 1.0
rpoC 766804 c.3435A>G synonymous_variant 1.0
rpoC 766861 c.3492G>C synonymous_variant 1.0
rpoC 766864 c.3495G>C synonymous_variant 1.0
rpoC 766876 c.3507C>T synonymous_variant 1.0
rpoC 766882 c.3513C>T synonymous_variant 1.0
rpoC 766894 c.3525T>C synonymous_variant 1.0
rpoC 766895 c.3526T>C synonymous_variant 1.0
rpoC 766900 c.3531T>C synonymous_variant 1.0
rpoC 766933 c.3564A>G synonymous_variant 1.0
rpoC 766945 c.3576A>G synonymous_variant 1.0
rpoC 766963 c.3594T>C synonymous_variant 0.8
rpoC 766972 c.3603G>C synonymous_variant 0.86
rpoC 766996 c.3627C>T synonymous_variant 0.86
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.88
rpoC 767014 c.3645G>C synonymous_variant 0.88
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.88
rpoC 767059 c.3690T>G synonymous_variant 0.83
rpoC 767062 c.3693C>A synonymous_variant 0.83
rpoC 767098 c.3729T>C synonymous_variant 0.86
rpoC 767119 c.3750A>G synonymous_variant 1.0
rpoC 767134 c.3765C>A synonymous_variant 1.0
rpoC 767158 c.3789T>C synonymous_variant 1.0
rpoC 767180 p.Ala1271Gln missense_variant 1.0
rpoC 767191 c.3822C>G synonymous_variant 1.0
rpoC 767206 c.3837C>G synonymous_variant 0.83
rpoC 767209 c.3840T>C synonymous_variant 0.8
rpoC 767212 c.3843G>C synonymous_variant 0.8
rpoC 767221 c.3852C>G synonymous_variant 0.8
rpoC 767230 c.3861G>C synonymous_variant 0.8
rpoC 767233 c.3864T>C synonymous_variant 0.8
rpoC 767263 c.3894T>C synonymous_variant 0.67
rpoC 767264 p.Ala1299Gln missense_variant 0.67
rpoC 767275 c.3906T>C synonymous_variant 0.67
rpoC 767278 c.3909T>C synonymous_variant 0.67
rpoC 767281 c.3912C>G synonymous_variant 0.67
rpoC 767284 c.3915C>T synonymous_variant 0.67
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775939 p.Ala848Ser missense_variant 0.33
mmpL5 775946 c.2535C>G synonymous_variant 0.33
mmpL5 775955 p.Ile842Leu missense_variant 0.4
mmpL5 775961 c.2520C>T synonymous_variant 0.4
mmpL5 775975 c.2506T>C synonymous_variant 0.4
mmpL5 775981 p.Leu834Met missense_variant 0.4
mmpL5 775990 c.2491C>T synonymous_variant 0.4
mmpL5 775993 p.Glu830Lys missense_variant 0.4
mmpL5 775994 p.Ile829Leu missense_variant 0.4
mmpL5 776008 p.His825Tyr missense_variant 0.4
mmpL5 776009 c.2472A>G synonymous_variant 0.4
mmpL5 776015 p.Ile822Leu missense_variant 0.4
mmpL5 776018 c.2463G>C synonymous_variant 0.4
mmpL5 776024 c.2457G>C synonymous_variant 0.4
mmpL5 776027 c.2454G>C synonymous_variant 0.4
mmpL5 776030 c.2451G>A synonymous_variant 0.5
mmpL5 776053 c.2428T>C synonymous_variant 0.5
mmpL5 776056 p.Val809Leu missense_variant 0.5
mmpL5 777133 p.Val450Ile missense_variant 1.0
mmpL5 777158 c.1323C>G synonymous_variant 1.0
mmpL5 777164 c.1317C>G synonymous_variant 1.0
mmpL5 777170 c.1311T>C synonymous_variant 1.0
mmpL5 777176 p.Glu435Asp missense_variant 1.0
mmpL5 777191 c.1290C>G synonymous_variant 1.0
mmpL5 777194 c.1287A>G synonymous_variant 1.0
mmpL5 777206 c.1275A>G synonymous_variant 1.0
mmpL5 777212 p.Ala423Thr missense_variant 1.0
mmpL5 777215 c.1266C>G synonymous_variant 1.0
mmpL5 777218 c.1263G>A synonymous_variant 1.0
rpsL 781649 c.90T>C synonymous_variant 0.5
rpsL 781655 c.96T>C synonymous_variant 0.5
rpsL 781700 c.141G>C synonymous_variant 0.43
rpsL 781703 c.144G>T synonymous_variant 0.5
rpsL 781715 c.156T>C synonymous_variant 0.43
rpsL 781728 c.169T>C synonymous_variant 0.43
rpsL 781736 c.177T>C synonymous_variant 0.43
rpsL 781742 c.183C>T synonymous_variant 0.5
rpsL 781748 c.189C>G synonymous_variant 0.5
rpsL 781754 c.195G>C synonymous_variant 0.56
rpsL 781760 c.201T>C synonymous_variant 0.56
rpsL 781772 c.213C>A synonymous_variant 0.57
rpsL 781808 c.249C>T synonymous_variant 0.5
rpsL 781811 c.252C>T synonymous_variant 0.5
rpsL 781832 c.273T>C synonymous_variant 0.62
rpsL 781838 c.279G>C synonymous_variant 0.62
rpsL 781841 c.282C>G synonymous_variant 0.6
rpsL 781865 c.306G>C synonymous_variant 0.67
rpsL 781868 c.309T>C synonymous_variant 0.62
rpsL 781871 c.312G>C synonymous_variant 0.62
rpsL 781877 c.318T>C synonymous_variant 0.62
rpsL 781892 c.333A>G synonymous_variant 0.5
rpsL 781898 c.339A>T synonymous_variant 0.44
rpsL 781916 c.357T>C synonymous_variant 0.33
rpsL 781929 p.Gly124Ser missense_variant 0.25
rplC 800612 c.-197A>G upstream_gene_variant 0.67
rplC 800618 c.-191T>C upstream_gene_variant 0.67
rplC 800627 c.-182C>T upstream_gene_variant 0.67
rplC 800648 c.-161A>T upstream_gene_variant 0.67
rplC 800654 c.-155T>C upstream_gene_variant 0.57
rplC 800693 c.-116A>G upstream_gene_variant 0.43
rplC 800703 c.-106T>C upstream_gene_variant 0.43
rplC 800715 c.-94A>C upstream_gene_variant 0.44
rplC 800720 c.-89T>C upstream_gene_variant 0.44
rplC 800723 c.-86C>G upstream_gene_variant 0.44
rplC 800747 c.-62C>G upstream_gene_variant 0.33
rplC 800771 c.-38C>T upstream_gene_variant 0.43
rplC 800794 c.-15A>G upstream_gene_variant 0.4
rplC 800796 c.-13A>G upstream_gene_variant 0.4
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.5
rplC 800814 c.6A>G synonymous_variant 0.67
rplC 800817 c.9A>T synonymous_variant 0.67
rplC 800844 c.36T>C synonymous_variant 0.6
rplC 800865 c.57A>G synonymous_variant 0.67
rplC 800867 p.Ser20Asn missense_variant 0.67
rplC 800874 c.66A>G synonymous_variant 0.67
rplC 800875 p.Val23Ile missense_variant 0.67
rplC 800880 c.72A>G synonymous_variant 0.67
rplC 800889 c.81C>G synonymous_variant 0.67
rplC 800892 c.84G>C synonymous_variant 0.67
fbiC 1303431 c.501T>C synonymous_variant 0.33
fbiC 1303434 c.504C>T synonymous_variant 0.33
fbiC 1303437 c.507C>G synonymous_variant 0.33
fbiC 1303441 c.511T>C synonymous_variant 0.4
fbiC 1303455 c.525C>G synonymous_variant 0.57
fbiC 1303464 c.534A>G synonymous_variant 0.57
fbiC 1303470 c.540T>G synonymous_variant 0.57
fbiC 1303476 c.546G>C synonymous_variant 0.5
fbiC 1303480 p.Gln184Glu missense_variant 0.56
fbiC 1303489 c.559C>T synonymous_variant 0.5
fbiC 1303497 c.567G>A synonymous_variant 0.5
fbiC 1303501 c.571C>T synonymous_variant 0.5
fbiC 1303509 c.579G>C synonymous_variant 0.5
fbiC 1303512 c.582T>C synonymous_variant 0.57
fbiC 1303521 c.591C>T synonymous_variant 0.5
fbiC 1303530 c.600G>A synonymous_variant 0.5
fbiC 1303534 p.Ser202Ala missense_variant 0.5
fbiC 1303539 c.609G>C synonymous_variant 0.5
fbiC 1303545 c.615A>G synonymous_variant 0.56
fbiC 1303575 c.645G>C synonymous_variant 0.6
fbiC 1303590 c.660A>G synonymous_variant 0.67
fbiC 1303602 c.672A>G synonymous_variant 0.57
fbiC 1303605 c.675C>G synonymous_variant 0.5
fbiC 1303608 c.678G>A synonymous_variant 0.5
fbiC 1303614 c.684C>T synonymous_variant 0.5
fbiC 1303617 c.687C>G synonymous_variant 0.5
fbiC 1303632 c.702T>G synonymous_variant 0.6
fbiC 1303641 c.711C>T synonymous_variant 0.6
fbiC 1303650 c.720G>C synonymous_variant 0.6
fbiC 1303654 c.724C>T synonymous_variant 0.6
fbiC 1303659 c.729T>C synonymous_variant 0.6
fbiC 1303661 p.Val244Ala missense_variant 0.6
fbiC 1303663 c.733C>T synonymous_variant 0.6
fbiC 1303671 c.741C>T synonymous_variant 0.75
fbiC 1303674 c.744C>G synonymous_variant 0.75
fbiC 1303681 c.751T>C synonymous_variant 0.6
fbiC 1303686 c.756C>G synonymous_variant 0.6
fbiC 1303695 c.765T>C synonymous_variant 0.4
fbiC 1303785 c.855G>C synonymous_variant 0.4
fbiC 1303789 p.Ile287Val missense_variant 0.4
fbiC 1303797 c.867A>G synonymous_variant 0.43
fbiC 1303818 c.888C>G synonymous_variant 0.43
fbiC 1303836 c.906G>C synonymous_variant 0.62
fbiC 1303845 c.915C>G synonymous_variant 0.75
fbiC 1303846 p.Phe306Val missense_variant 0.75
fbiC 1303854 c.924T>C synonymous_variant 0.75
fbiC 1303860 c.930A>C synonymous_variant 0.75
fbiC 1303884 c.954T>G synonymous_variant 0.56
fbiC 1303905 c.975G>C synonymous_variant 0.55
fbiC 1303914 c.984C>G synonymous_variant 0.6
fbiC 1303920 c.990C>T synonymous_variant 0.6
fbiC 1303944 c.1014G>C synonymous_variant 0.29
fbiC 1303947 c.1017T>G synonymous_variant 0.33
fbiC 1303948 p.Gly340Arg missense_variant 0.33
fbiC 1303953 p.Asp341Glu missense_variant 0.33
fbiC 1303956 c.1026A>G synonymous_variant 0.33
fbiC 1303961 p.Arg344Leu missense_variant 0.33
fbiC 1303971 c.1041T>C synonymous_variant 0.33
fbiC 1303980 c.1050G>A synonymous_variant 0.29
fbiC 1304694 c.1764A>C synonymous_variant 0.29
fbiC 1304703 c.1773C>G synonymous_variant 0.29
fbiC 1304711 p.Ala594Glu missense_variant 0.4
fbiC 1304715 c.1785G>C synonymous_variant 0.33
fbiC 1304724 c.1794A>G synonymous_variant 0.33
fbiC 1304727 c.1797A>G synonymous_variant 0.33
fbiC 1304739 c.1809C>T synonymous_variant 0.33
fbiC 1304742 c.1812T>C synonymous_variant 0.33
fbiC 1304757 c.1827A>G synonymous_variant 0.4
fbiC 1304778 c.1848T>C synonymous_variant 0.5
fbiC 1304784 c.1854T>C synonymous_variant 0.67
fbiC 1304787 c.1857T>G synonymous_variant 0.67
fbiC 1304808 c.1878C>G synonymous_variant 0.75
fbiC 1304811 c.1881C>G synonymous_variant 0.75
fbiC 1304817 c.1887T>C synonymous_variant 0.8
fbiC 1304829 c.1899T>C synonymous_variant 0.83
fbiC 1304832 c.1902C>T synonymous_variant 0.83
fbiC 1304856 c.1926C>G synonymous_variant 0.8
fbiC 1304862 c.1932G>A synonymous_variant 0.8
fbiC 1304869 c.1939C>T synonymous_variant 1.0
fbiC 1304875 p.Ile649Val missense_variant 1.0
fbiC 1304883 p.Glu651Asp missense_variant 1.0
fbiC 1304891 p.Ile654Thr missense_variant 1.0
fbiC 1304893 p.Gly655Ser missense_variant 1.0
fbiC 1304907 c.1977C>G synonymous_variant 1.0
fbiC 1304910 c.1980G>C synonymous_variant 1.0
fbiC 1304916 c.1986T>C synonymous_variant 1.0
fbiC 1304928 c.1998T>C synonymous_variant 1.0
fbiC 1304937 c.2007G>C synonymous_variant 1.0
fbiC 1304958 c.2028T>G synonymous_variant 0.83
fbiC 1304983 c.2053C>T synonymous_variant 0.75
fbiC 1304994 c.2064A>G synonymous_variant 0.75
fbiC 1304995 p.Leu689Met missense_variant 0.75
fbiC 1305006 c.2076A>G synonymous_variant 0.75
fbiC 1305012 c.2082G>C synonymous_variant 0.75
fbiC 1305015 c.2085G>C synonymous_variant 0.75
fbiC 1305021 c.2091C>G synonymous_variant 0.75
fbiC 1305030 c.2100G>C synonymous_variant 0.67
fbiC 1305033 c.2103T>G synonymous_variant 0.67
fbiC 1305042 c.2112A>G synonymous_variant 0.67
fbiC 1305045 c.2115A>G synonymous_variant 0.67
fbiC 1305203 p.Arg758Leu missense_variant 0.29
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472300 n.455C>T non_coding_transcript_exon_variant 1.0
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 1.0
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.67
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 1.0
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.67
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.75
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 0.67
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 1.0
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 1.0
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.67
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.75
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.75
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 1.0
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 1.0
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 1.0
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 1.0
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 1.0
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 1.0
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 1.0
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 1.0
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 1.0
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 1.0
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 1.0
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 1.0
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 1.0
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 1.0
rpsA 1833568 c.27G>C synonymous_variant 0.67
rpsA 1833589 c.48A>T synonymous_variant 0.75
rpsA 1833595 c.54T>C synonymous_variant 0.8
rpsA 1833661 c.120A>G synonymous_variant 0.86
rpsA 1833667 c.126C>G synonymous_variant 0.86
rpsA 1833721 c.180A>G synonymous_variant 1.0
rpsA 1833724 c.183C>G synonymous_variant 1.0
rpsA 1833727 c.186G>C synonymous_variant 1.0
rpsA 1833742 c.201A>G synonymous_variant 1.0
rpsA 1833745 c.204G>C synonymous_variant 1.0
rpsA 1833748 c.207C>G synonymous_variant 1.0
rpsA 1833886 c.345C>G synonymous_variant 0.4
rpsA 1833928 c.387G>C synonymous_variant 0.5
rpsA 1833940 c.399C>G synonymous_variant 0.67
rpsA 1833971 c.430C>T synonymous_variant 0.62
rpsA 1833979 c.438T>C synonymous_variant 0.67
rpsA 1834000 c.459G>C synonymous_variant 0.75
rpsA 1834021 c.480C>T synonymous_variant 0.75
rpsA 1834030 c.489C>G synonymous_variant 0.75
rpsA 1834081 c.540C>T synonymous_variant 0.78
rpsA 1834096 c.555G>C synonymous_variant 0.67
rpsA 1834099 c.558C>G synonymous_variant 0.67
rpsA 1834102 c.561T>C synonymous_variant 0.67
rpsA 1834105 c.564C>G synonymous_variant 0.67
rpsA 1834108 c.567C>G synonymous_variant 0.67
rpsA 1834123 c.582C>G synonymous_variant 0.8
rpsA 1834150 c.609G>C synonymous_variant 0.67
rpsA 1834153 c.612T>C synonymous_variant 0.67
rpsA 1834154 p.Asn205Gln missense_variant 0.67
rpsA 1834157 c.616T>C synonymous_variant 1.0
rpsA 1834162 c.621A>G synonymous_variant 0.67
rpsA 1834165 c.624A>G synonymous_variant 1.0
rpsA 1834169 p.Thr210Ala missense_variant 1.0
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 1.0
rpsA 1834195 c.654G>C synonymous_variant 1.0
rpsA 1834210 c.669C>T synonymous_variant 1.0
rpsA 1834222 c.681T>C synonymous_variant 1.0
rpsA 1834303 c.762T>C synonymous_variant 0.67
rpsA 1834306 c.765T>C synonymous_variant 0.67
rpsA 1834348 c.807T>C synonymous_variant 0.57
rpsA 1834366 c.825A>G synonymous_variant 0.43
rpsA 1834396 c.855G>C synonymous_variant 0.6
rpsA 1834411 c.870T>C synonymous_variant 0.43
rpsA 1834417 c.876G>C synonymous_variant 0.43
rpsA 1834423 c.882G>C synonymous_variant 0.33
rpsA 1834435 c.894G>C synonymous_variant 0.33
rpsA 1834451 c.910T>C synonymous_variant 0.33
rpsA 1834513 c.972C>G synonymous_variant 0.33
rpsA 1834732 c.1191T>C synonymous_variant 1.0
rpsA 1834733 p.Ala398Ser missense_variant 1.0
rpsA 1834738 c.1197A>G synonymous_variant 1.0
rpsA 1834753 c.1212T>C synonymous_variant 1.0
rpsA 1834765 p.Glu408Asp missense_variant 1.0
rpsA 1834775 p.Ala412Thr missense_variant 0.67
rpsA 1834780 c.1239A>G synonymous_variant 0.67
rpsA 1834786 c.1245A>G synonymous_variant 0.67
rpsA 1834789 c.1248T>C synonymous_variant 0.67
rpsA 1834792 c.1251G>C synonymous_variant 0.67
ndh 2101723 c.1320G>C synonymous_variant 0.67
ndh 2101726 c.1317A>C synonymous_variant 0.67
ndh 2101729 c.1314G>C synonymous_variant 0.67
ndh 2101732 c.1311T>C synonymous_variant 0.67
ndh 2101735 c.1308A>G synonymous_variant 0.67
ndh 2101744 p.Asp433Glu missense_variant 0.67
ndh 2101756 c.1287G>C synonymous_variant 0.67
ndh 2101765 c.1278C>G synonymous_variant 0.67
ndh 2101768 c.1275C>A synonymous_variant 0.67
ndh 2101771 c.1272T>G synonymous_variant 0.67
ndh 2101774 c.1269T>C synonymous_variant 0.67
ndh 2101777 c.1266C>G synonymous_variant 0.67
ndh 2101783 c.1260T>G synonymous_variant 0.67
ndh 2101804 c.1239T>G synonymous_variant 0.67
ndh 2101808 p.Thr412Ser missense_variant 0.67
ndh 2101830 p.Ile405Val missense_variant 0.67
ndh 2101837 p.Ala402Val missense_variant 0.67
katG 2155503 c.609C>T synonymous_variant 1.0
katG 2156056 p.Gly19Val missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2168460 p.Asn718Ser missense_variant 1.0
PPE35 2169507 p.Thr369Met missense_variant 0.5
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
kasA 2517947 c.-168C>T upstream_gene_variant 0.29
kasA 2517950 c.-165C>G upstream_gene_variant 0.43
kasA 2517974 c.-141T>C upstream_gene_variant 0.29
kasA 2517989 c.-126T>C upstream_gene_variant 0.67
kasA 2517993 c.-122G>T upstream_gene_variant 0.5
kasA 2518019 c.-96A>G upstream_gene_variant 0.4
kasA 2518025 c.-90G>C upstream_gene_variant 0.4
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2518348 c.234A>T synonymous_variant 0.67
kasA 2518361 p.Val83Ile missense_variant 0.67
kasA 2518468 c.354A>C synonymous_variant 0.67
kasA 2518474 c.360G>A synonymous_variant 0.75
kasA 2518480 c.366T>C synonymous_variant 0.75
kasA 2518483 c.369C>G synonymous_variant 0.75
kasA 2518504 c.390T>C synonymous_variant 1.0
kasA 2518506 p.Ala131Glu missense_variant 1.0
kasA 2518519 c.405G>C synonymous_variant 1.0
kasA 2518528 c.414C>G synonymous_variant 1.0
kasA 2518540 c.426T>C synonymous_variant 1.0
kasA 2518561 c.447T>C synonymous_variant 1.0
kasA 2518567 c.453G>C synonymous_variant 1.0
kasA 2518570 c.456G>C synonymous_variant 1.0
kasA 2518574 p.Ile154Val missense_variant 1.0
kasA 2518579 c.465T>C synonymous_variant 1.0
kasA 2518588 c.474T>C synonymous_variant 1.0
kasA 2518591 c.477G>C synonymous_variant 1.0
kasA 2518609 p.Met165Ile missense_variant 1.0
kasA 2518732 c.618C>G synonymous_variant 0.67
kasA 2518744 c.630C>T synonymous_variant 0.5
kasA 2518747 c.633C>G synonymous_variant 0.4
kasA 2518963 c.849T>C synonymous_variant 0.4
kasA 2518969 c.855T>G synonymous_variant 0.4
kasA 2518975 c.861C>G synonymous_variant 0.5
kasA 2518979 c.865A>C synonymous_variant 0.5
kasA 2518990 c.876T>G synonymous_variant 0.5
kasA 2518993 c.879C>G synonymous_variant 0.5
kasA 2518999 c.885G>A synonymous_variant 0.5
kasA 2519008 c.894C>G synonymous_variant 0.5
kasA 2519017 c.903G>C synonymous_variant 0.5
kasA 2519020 c.906G>C synonymous_variant 0.5
kasA 2519021 p.Ala303Lys missense_variant 0.5
kasA 2519027 p.Ile305Val missense_variant 0.5
kasA 2519050 c.936C>G synonymous_variant 0.5
kasA 2519053 c.939G>C synonymous_variant 0.5
kasA 2519062 c.948T>G synonymous_variant 0.5
kasA 2519068 c.954C>T synonymous_variant 0.6
kasA 2519072 p.Ala320Thr missense_variant 0.5
ahpC 2726210 c.18T>C synonymous_variant 0.67
ahpC 2726216 c.24T>C synonymous_variant 0.67
ahpC 2726219 c.27A>G synonymous_variant 0.75
ahpC 2726232 p.Gln14Glu missense_variant 1.0
ahpC 2726243 c.51T>G synonymous_variant 1.0
ahpC 2726244 c.52_54delCTCinsTTG synonymous_variant 1.0
ahpC 2726251 p.Gly20Ala missense_variant 1.0
ahpC 2726255 c.63T>C synonymous_variant 1.0
ahpC 2726258 c.66C>T synonymous_variant 1.0
ahpC 2726303 c.111T>C synonymous_variant 0.8
ahpC 2726311 p.Ser40Asn missense_variant 0.8
ahpC 2726315 p.Asp41Glu missense_variant 0.8
ahpC 2726318 p.Glu42Asp missense_variant 0.8
ahpC 2726322 p.Pro44Ala missense_variant 0.8
ahpC 2726330 c.138G>A synonymous_variant 0.8
ahpC 2726336 c.144G>C synonymous_variant 0.8
ahpC 2726348 c.156T>C synonymous_variant 1.0
ahpC 2726357 c.165A>G synonymous_variant 1.0
ahpC 2726366 c.174G>C synonymous_variant 1.0
Rv2752c 3065979 c.213T>C synonymous_variant 0.6
Rv2752c 3065993 p.Val67Ile missense_variant 0.6
Rv2752c 3065994 c.198T>C synonymous_variant 0.6
Rv2752c 3066002 p.Met64Leu missense_variant 0.6
Rv2752c 3066009 c.183G>C synonymous_variant 0.6
Rv2752c 3066018 c.174T>C synonymous_variant 0.75
Rv2752c 3066024 c.168T>G synonymous_variant 0.75
Rv2752c 3066040 p.Gly51Thr missense_variant 0.75
Rv2752c 3066042 c.150T>C synonymous_variant 0.75
Rv2752c 3066045 c.147T>C synonymous_variant 0.75
Rv2752c 3066050 p.Leu48Met missense_variant 0.75
Rv2752c 3066054 c.138T>G synonymous_variant 0.75
Rv2752c 3066066 c.126T>C synonymous_variant 0.75
Rv2752c 3066074 c.118C>T synonymous_variant 0.75
Rv2752c 3066075 c.117A>G synonymous_variant 0.75
Rv2752c 3066078 c.114C>T synonymous_variant 0.75
Rv2752c 3066102 c.90C>T synonymous_variant 1.0
thyX 3067589 c.357G>A synonymous_variant 0.4
thyX 3067611 p.Lys112Thr missense_variant 0.29
thyX 3067619 c.327A>C synonymous_variant 0.33
thyX 3067631 c.315C>G synonymous_variant 0.33
thyX 3067634 c.312C>G synonymous_variant 0.33
thyX 3067652 c.294T>C synonymous_variant 0.33
thyX 3067661 c.285C>G synonymous_variant 0.33
thyX 3067685 c.261A>C synonymous_variant 0.4
thyX 3067691 p.Ile85Leu missense_variant 0.4
thyX 3067694 c.252G>C synonymous_variant 0.4
thyX 3067718 c.228C>G synonymous_variant 0.6
thyX 3067721 c.225T>C synonymous_variant 0.5
thyX 3067727 c.219A>C synonymous_variant 0.5
thyX 3067736 p.Phe70Leu missense_variant 0.75
thyX 3067739 c.207T>C synonymous_variant 0.75
thyX 3067765 p.Leu61Ile missense_variant 1.0
thyX 3067772 c.174C>G synonymous_variant 1.0
thyX 3067781 c.165C>A synonymous_variant 1.0
thyX 3067793 c.153T>C synonymous_variant 0.67
thyX 3067799 c.147G>A synonymous_variant 0.67
thyX 3067802 c.144C>G synonymous_variant 0.67
thyX 3067814 c.132T>C synonymous_variant 0.5
thyX 3067850 c.96A>C synonymous_variant 0.5
thyA 3073824 c.648A>G synonymous_variant 0.67
thyA 3073827 c.645A>G synonymous_variant 0.75
thyA 3073836 c.636C>T synonymous_variant 0.75
thyA 3073839 c.633T>C synonymous_variant 0.75
thyA 3073860 c.612C>G synonymous_variant 0.75
thyA 3073863 c.609T>C synonymous_variant 0.75
thyA 3073866 c.606C>G synonymous_variant 0.75
thyA 3073872 p.Ile200Val missense_variant 0.75
thyA 3073892 c.580T>C synonymous_variant 0.75
thyA 3073898 p.Ala192Ser missense_variant 0.75
thyA 3073917 c.555C>G synonymous_variant 0.75
thyA 3073920 c.552C>G synonymous_variant 0.75
thyA 3073925 c.547T>C synonymous_variant 0.75
thyA 3073929 c.543T>C synonymous_variant 0.75
thyA 3073953 c.519T>C synonymous_variant 0.75
thyA 3073956 c.516G>C synonymous_variant 0.75
thyA 3073959 c.513T>C synonymous_variant 0.75
thyA 3074004 c.468T>C synonymous_variant 1.0
thyA 3074010 c.462C>G synonymous_variant 1.0
thyA 3074028 c.444G>C synonymous_variant 1.0
thyA 3074031 c.441T>C synonymous_variant 1.0
thyA 3074034 c.438T>C synonymous_variant 1.0
thyA 3074037 c.435C>G synonymous_variant 1.0
thyA 3074053 p.Arg140Gln missense_variant 1.0
thyA 3074055 p.Glu139Pro missense_variant 1.0
thyA 3074061 c.411A>G synonymous_variant 1.0
thyA 3074079 c.393G>C synonymous_variant 1.0
thyA 3074097 c.375C>G synonymous_variant 1.0
thyA 3074100 p.Asp124Asn missense_variant 1.0
thyA 3074106 c.366T>C synonymous_variant 1.0
thyA 3074127 c.345G>C synonymous_variant 1.0
thyA 3074130 c.342G>C synonymous_variant 1.0
thyA 3074181 c.291A>G synonymous_variant 1.0
thyA 3074187 c.285T>C synonymous_variant 1.0
thyA 3074205 p.Glu89Asp missense_variant 1.0
thyA 3074214 c.258T>C synonymous_variant 1.0
thyA 3074241 c.231C>G synonymous_variant 1.0
thyA 3074244 c.228A>G synonymous_variant 1.0
Rv3083 3449723 p.Cys407Tyr missense_variant 1.0
fprA 3473809 c.-198G>C upstream_gene_variant 0.5
fprA 3473812 c.-195G>A upstream_gene_variant 0.5
fprA 3473843 c.-164C>G upstream_gene_variant 0.43
fprA 3473848 c.-159_-157delCAAinsGAG upstream_gene_variant 0.33
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3475159 p.Asn385Asp missense_variant 1.0
fbiB 3642656 c.1122G>C synonymous_variant 1.0
fbiB 3642662 c.1128C>G synonymous_variant 1.0
fbiB 3642668 c.1134A>G synonymous_variant 1.0
fbiB 3642677 c.1143A>G synonymous_variant 1.0
fbiB 3642680 c.1146A>G synonymous_variant 1.0
fbiB 3642684 c.1150T>C synonymous_variant 1.0
fbiB 3642701 c.1167C>G synonymous_variant 1.0
fbiB 3642719 c.1185T>C synonymous_variant 1.0
fbiB 3642731 c.1197C>G synonymous_variant 1.0
fbiB 3642743 c.1209T>C synonymous_variant 1.0
fbiB 3642749 c.1215T>C synonymous_variant 1.0
fbiB 3642758 c.1224C>G synonymous_variant 1.0
fbiB 3642763 p.Asp410Ala missense_variant 0.67
fbiB 3642770 c.1236G>C synonymous_variant 0.67
fbiB 3642779 c.1245A>C synonymous_variant 0.67
fbiB 3642781 p.Val416Ala missense_variant 0.67
alr 3840545 c.876C>A synonymous_variant 0.4
rpoA 3877553 p.Glu319Gln missense_variant 0.67
rpoA 3877571 p.Pro313Ala missense_variant 0.6
rpoA 3877587 c.921A>G synonymous_variant 0.5
rpoA 3877613 p.Ile299Val missense_variant 0.57
rpoA 3877656 c.852T>G synonymous_variant 0.5
rpoA 3877668 c.840A>G synonymous_variant 0.5
rpoA 3877679 p.Ala277Ser missense_variant 0.44
rpoA 3877686 c.822A>G synonymous_variant 0.44
rpoA 3877692 c.816G>C synonymous_variant 0.4
rpoA 3877704 c.804G>C synonymous_variant 0.33
rpoA 3877743 c.765T>C synonymous_variant 0.29
rpoA 3877875 c.633T>G synonymous_variant 0.5
rpoA 3877878 c.630G>C synonymous_variant 0.5
rpoA 3877890 c.618C>T synonymous_variant 0.5
rpoA 3877896 c.612G>C synonymous_variant 0.5
rpoA 3877900 p.Ser203Asn missense_variant 0.5
rpoA 3877905 c.603A>G synonymous_variant 0.5
rpoA 3877909 p.Asn200Ser missense_variant 0.5
rpoA 3877920 c.588G>C synonymous_variant 0.5
rpoA 3877923 c.585C>T synonymous_variant 0.6
rpoA 3877926 c.582G>C synonymous_variant 0.6
rpoA 3877962 c.546G>T synonymous_variant 0.67
rpoA 3877986 c.522G>C synonymous_variant 0.8
rpoA 3877989 c.519A>G synonymous_variant 0.83
rpoA 3878001 c.507A>G synonymous_variant 0.75
rpoA 3878022 c.486T>C synonymous_variant 0.75
rpoA 3878028 c.480G>C synonymous_variant 0.67
rpoA 3878031 c.477T>C synonymous_variant 0.8
rpoA 3878040 c.468T>C synonymous_variant 0.8
rpoA 3878043 c.465G>A synonymous_variant 0.8
rpoA 3878055 c.453A>G synonymous_variant 0.75
rpoA 3878058 c.450G>T synonymous_variant 0.75
rpoA 3878061 c.447G>C synonymous_variant 0.75
rpoA 3878067 c.441C>G synonymous_variant 0.75
rpoA 3878070 c.438T>C synonymous_variant 0.75
rpoA 3878076 c.432C>T synonymous_variant 0.75
rpoA 3878082 c.426T>G synonymous_variant 0.75
rpoA 3878094 c.414C>G synonymous_variant 0.8
rpoA 3878103 c.405A>G synonymous_variant 0.75
rpoA 3878106 c.402G>C synonymous_variant 0.75
rpoA 3878118 c.390T>C synonymous_variant 0.6
rpoA 3878130 c.378C>G synonymous_variant 0.6
rpoA 3878141 p.Met123Leu missense_variant 0.6
rpoA 3878143 p.Gly122Asp missense_variant 0.5
rpoA 3878157 c.351C>G synonymous_variant 0.75
rpoA 3878163 c.345C>T synonymous_variant 0.75
rpoA 3878169 c.339G>C synonymous_variant 0.75
rpoA 3878172 c.336G>C synonymous_variant 0.75
rpoA 3878181 c.327C>T synonymous_variant 0.75
rpoA 3878187 c.321C>G synonymous_variant 0.75
rpoA 3878193 c.315T>C synonymous_variant 0.67
rpoA 3878199 c.309T>C synonymous_variant 0.67
rpoA 3878247 c.261G>C synonymous_variant 0.67
rpoA 3878271 c.237T>C synonymous_variant 1.0
rpoA 3878284 p.Glu75Ala missense_variant 1.0
rpoA 3878292 c.216T>C synonymous_variant 1.0
rpoA 3878364 c.144A>T synonymous_variant 0.67
rpoA 3878367 c.141C>G synonymous_variant 0.67
rpoA 3878376 c.132G>C synonymous_variant 0.67
rpoA 3878454 c.54A>C synonymous_variant 0.67
rpoA 3878472 p.Asp12Glu missense_variant 0.67
rpoA 3878478 c.30C>G synonymous_variant 0.67
rpoA 3878484 c.24C>A synonymous_variant 0.67
rpoA 3878490 c.18C>A synonymous_variant 0.67
rpoA 3878496 c.12A>T synonymous_variant 0.67
clpC1 4038456 p.Val750Glu missense_variant 1.0
clpC1 4038460 p.Leu749Met missense_variant 1.0
clpC1 4038486 p.Gly740Asn missense_variant 1.0
clpC1 4038489 p.Ala739Gly missense_variant 1.0
clpC1 4038494 c.2211G>C synonymous_variant 1.0
clpC1 4038497 p.Ser736Gln missense_variant 1.0
clpC1 4038530 p.Glu725Asp missense_variant 1.0
clpC1 4038596 c.2109A>G synonymous_variant 1.0
clpC1 4038623 c.2082A>G synonymous_variant 1.0
clpC1 4038640 p.Asp689Asn missense_variant 1.0
clpC1 4038653 c.2052C>T synonymous_variant 1.0
clpC1 4038658 p.Lys683Gln missense_variant 1.0
clpC1 4038661 p.Ser682Thr missense_variant 1.0
clpC1 4038662 c.2043T>C synonymous_variant 1.0
clpC1 4038671 c.2034T>C synonymous_variant 1.0
clpC1 4038683 c.2022T>C synonymous_variant 1.0
clpC1 4038695 c.2010C>G synonymous_variant 1.0
clpC1 4038701 c.2004G>C synonymous_variant 1.0
clpC1 4038704 c.2001T>C synonymous_variant 1.0
clpC1 4038707 c.1998C>G synonymous_variant 1.0
clpC1 4038710 c.1995G>C synonymous_variant 1.0
clpC1 4038713 c.1992T>C synonymous_variant 1.0
clpC1 4038749 c.1956C>G synonymous_variant 1.0
clpC1 4038755 c.1950G>T synonymous_variant 1.0
clpC1 4038770 c.1935C>T synonymous_variant 1.0
clpC1 4038773 c.1932T>C synonymous_variant 1.0
clpC1 4038782 c.1923G>C synonymous_variant 1.0
clpC1 4038812 c.1893T>C synonymous_variant 1.0
clpC1 4038821 c.1884G>A synonymous_variant 1.0
clpC1 4038845 c.1860G>C synonymous_variant 1.0
clpC1 4038860 c.1845G>C synonymous_variant 1.0
clpC1 4038878 c.1827A>G synonymous_variant 0.8
clpC1 4038908 c.1797C>G synonymous_variant 0.83
clpC1 4038914 c.1791G>C synonymous_variant 0.83
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.83
clpC1 4038953 c.1752A>G synonymous_variant 0.88
clpC1 4038956 c.1749T>C synonymous_variant 0.88
clpC1 4038965 c.1740T>C synonymous_variant 0.88
clpC1 4038971 c.1734T>C synonymous_variant 0.88
clpC1 4038974 c.1731T>C synonymous_variant 0.88
clpC1 4038989 c.1716T>C synonymous_variant 0.89
clpC1 4038997 c.1708T>C synonymous_variant 0.89
clpC1 4039004 c.1701C>G synonymous_variant 0.89
clpC1 4039022 c.1683A>G synonymous_variant 0.89
clpC1 4039064 c.1641C>T synonymous_variant 1.0
clpC1 4039097 c.1608G>C synonymous_variant 0.83
clpC1 4039103 c.1602T>C synonymous_variant 0.71
clpC1 4039106 c.1599G>C synonymous_variant 0.71
clpC1 4039112 c.1593C>G synonymous_variant 0.71
clpC1 4039121 c.1584T>C synonymous_variant 0.71
clpC1 4039142 c.1563A>G synonymous_variant 0.67
clpC1 4039145 c.1560G>C synonymous_variant 0.67
clpC1 4039169 p.Glu512Asp missense_variant 0.67
clpC1 4039172 c.1533A>G synonymous_variant 0.67
clpC1 4039178 c.1527G>C synonymous_variant 0.67
clpC1 4039183 c.1522T>C synonymous_variant 0.5
clpC1 4039186 c.1519C>T synonymous_variant 0.6
clpC1 4039226 c.1479T>C synonymous_variant 0.5
clpC1 4039480 c.1225C>A synonymous_variant 1.0
clpC1 4039481 c.1224T>G synonymous_variant 1.0
clpC1 4039517 c.1188C>G synonymous_variant 0.5
clpC1 4039694 c.1011G>C synonymous_variant 1.0
clpC1 4039724 c.981A>G synonymous_variant 0.67
clpC1 4039751 c.954A>G synonymous_variant 0.75
clpC1 4039757 c.948A>G synonymous_variant 0.75
clpC1 4039760 c.945T>C synonymous_variant 0.75
clpC1 4039766 c.939T>C synonymous_variant 0.75
clpC1 4039769 c.936C>G synonymous_variant 0.75
clpC1 4039775 c.930G>C synonymous_variant 0.8
clpC1 4039778 c.927A>G synonymous_variant 0.8
clpC1 4039781 c.924G>C synonymous_variant 0.8
clpC1 4039790 c.915C>G synonymous_variant 0.75
clpC1 4039817 c.888A>C synonymous_variant 0.75
clpC1 4039820 c.885T>G synonymous_variant 0.75
clpC1 4039826 c.879C>G synonymous_variant 0.8
clpC1 4039831 c.874T>C synonymous_variant 0.8
clpC1 4039850 c.855T>C synonymous_variant 0.8
clpC1 4039865 c.840T>C synonymous_variant 1.0
clpC1 4039898 c.807C>G synonymous_variant 1.0
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.83
clpC1 4039931 c.774T>C synonymous_variant 0.83
clpC1 4039937 c.768G>C synonymous_variant 0.83
clpC1 4039946 c.759A>C synonymous_variant 0.83
clpC1 4039952 c.753T>C synonymous_variant 0.83
clpC1 4039979 c.726C>G synonymous_variant 0.83
clpC1 4039988 c.717C>G synonymous_variant 0.8
clpC1 4039991 c.714G>C synonymous_variant 0.8
clpC1 4040021 c.684A>C synonymous_variant 0.75
clpC1 4040024 c.681A>G synonymous_variant 0.75
clpC1 4040033 c.672G>C synonymous_variant 0.67
clpC1 4040036 c.669C>G synonymous_variant 0.67
clpC1 4040171 c.534C>G synonymous_variant 1.0
clpC1 4040201 c.504C>G synonymous_variant 1.0
clpC1 4040204 c.501G>C synonymous_variant 1.0
clpC1 4040207 c.498T>G synonymous_variant 1.0
clpC1 4040210 c.495G>C synonymous_variant 1.0
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 1.0
clpC1 4040225 c.480A>C synonymous_variant 1.0
clpC1 4040228 c.477G>T synonymous_variant 1.0
clpC1 4040231 c.474C>T synonymous_variant 1.0
clpC1 4040237 c.468C>T synonymous_variant 1.0
clpC1 4040246 c.459C>G synonymous_variant 1.0
clpC1 4040249 c.456A>G synonymous_variant 1.0
clpC1 4040267 c.438A>G synonymous_variant 1.0
clpC1 4040273 c.432T>C synonymous_variant 1.0
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 1.0
clpC1 4040279 c.426C>G synonymous_variant 1.0
clpC1 4040291 c.414G>C synonymous_variant 1.0
clpC1 4040318 c.387C>G synonymous_variant 1.0
clpC1 4040330 c.375C>G synonymous_variant 1.0
clpC1 4040342 c.363C>G synonymous_variant 1.0
clpC1 4040354 c.351A>G synonymous_variant 1.0
clpC1 4040363 c.342A>T synonymous_variant 1.0
clpC1 4040369 c.336C>G synonymous_variant 1.0
clpC1 4040501 c.204C>T synonymous_variant 0.5
clpC1 4040522 c.183T>C synonymous_variant 0.5
clpC1 4040528 c.177G>C synonymous_variant 0.67
clpC1 4040531 c.174T>C synonymous_variant 0.67
clpC1 4040534 c.171A>G synonymous_variant 0.67
clpC1 4040537 c.168G>C synonymous_variant 0.67
clpC1 4040546 c.159G>C synonymous_variant 0.67
clpC1 4040551 c.154T>C synonymous_variant 0.67
embC 4240013 p.Pro51Ser missense_variant 0.5
embC 4240671 p.Thr270Ile missense_variant 1.0
embC 4240685 p.Thr275Ala missense_variant 0.5
embC 4240693 c.831T>G synonymous_variant 0.5
embC 4240699 c.837C>G synonymous_variant 0.5
embC 4240726 c.864G>C synonymous_variant 0.5
embC 4240780 c.918T>C synonymous_variant 0.75
embC 4240783 c.921G>C synonymous_variant 0.75
embC 4240789 c.927T>C synonymous_variant 0.75
embC 4240819 c.957A>G synonymous_variant 0.67
embC 4240828 c.966G>C synonymous_variant 0.67
embC 4240831 c.969T>G synonymous_variant 0.5
embC 4240945 c.1083T>G synonymous_variant 0.4
embC 4240954 p.Ile364Met missense_variant 0.4
embC 4240960 c.1098G>C synonymous_variant 0.4
embC 4240966 c.1104G>C synonymous_variant 0.4
embC 4240969 c.1107C>T synonymous_variant 0.4
embC 4240972 c.1110C>G synonymous_variant 0.4
embC 4240979 p.Thr373Gln missense_variant 0.4
embC 4240983 p.Ser374Asn missense_variant 0.5
embC 4240987 c.1125G>C synonymous_variant 0.5
embC 4240990 c.1128A>G synonymous_variant 0.5
embC 4240996 c.1134G>C synonymous_variant 0.5
embC 4241002 c.1140G>C synonymous_variant 0.5
embC 4241013 p.Met384Thr missense_variant 0.6
embC 4241017 c.1155T>C synonymous_variant 0.6
embC 4241023 c.1161T>G synonymous_variant 0.6
embC 4241032 c.1170G>C synonymous_variant 0.75
embC 4241038 c.1176G>C synonymous_variant 0.75
embC 4241047 c.1185C>G synonymous_variant 1.0
embC 4241050 c.1188T>G synonymous_variant 1.0
embC 4241053 c.1191G>C synonymous_variant 1.0
embC 4241095 c.1233C>T synonymous_variant 1.0
embC 4241107 c.1245G>C synonymous_variant 1.0
embC 4241140 c.1278A>G synonymous_variant 0.67
embC 4241146 c.1284C>G synonymous_variant 0.67
embC 4241479 c.1617C>G synonymous_variant 0.22
embC 4241480 c.1618T>C synonymous_variant 0.29
embC 4241488 c.1626G>C synonymous_variant 0.29
embC 4241496 p.Ala545Gly missense_variant 0.29
embC 4241500 c.1638A>C synonymous_variant 0.33
embC 4241501 p.Ser547Thr missense_variant 0.4
embC 4241506 c.1644G>C synonymous_variant 0.4
embC 4241518 c.1656A>G synonymous_variant 0.4
embC 4241521 c.1659T>C synonymous_variant 0.4
embC 4241530 c.1668C>A synonymous_variant 0.4
embC 4241536 c.1674A>G synonymous_variant 0.4
embC 4241539 c.1677T>C synonymous_variant 0.4
embC 4241545 c.1683T>C synonymous_variant 0.5
embC 4241548 c.1686T>C synonymous_variant 0.5
embC 4241551 c.1689A>G synonymous_variant 0.5
embC 4241567 p.Ile569Val missense_variant 0.67
embC 4241572 c.1710C>G synonymous_variant 0.67
embC 4241578 c.1716G>C synonymous_variant 0.67
embC 4241584 c.1722T>C synonymous_variant 0.67
embC 4241587 c.1725C>G synonymous_variant 0.67
embC 4241958 p.Arg699Leu missense_variant 0.33
embC 4241982 p.Pro707Gln missense_variant 0.33
embC 4242176 p.Pro772Ser missense_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242742 c.-491C>G upstream_gene_variant 0.5
embA 4242748 c.-485A>G upstream_gene_variant 0.43
embA 4242754 c.-479G>C upstream_gene_variant 0.43
embC 4242764 p.Val968Leu missense_variant 0.43
embC 4242779 p.Asn973Asp missense_variant 0.4
embC 4242791 p.Ala977Ser missense_variant 0.4
embA 4242796 c.-437G>C upstream_gene_variant 0.4
embA 4242799 c.-434T>C upstream_gene_variant 0.4
embA 4245053 c.1821G>C synonymous_variant 0.33
embA 4245060 c.1828T>C synonymous_variant 0.33
embA 4245083 c.1851A>C synonymous_variant 0.43
embA 4245089 c.1857G>C synonymous_variant 0.56
embA 4245092 c.1860C>G synonymous_variant 0.56
embA 4245101 c.1869G>C synonymous_variant 0.56
embA 4245137 c.1905T>C synonymous_variant 0.56
embA 4245146 c.1914G>A synonymous_variant 0.56
embA 4245149 c.1917C>G synonymous_variant 0.62
embA 4245153 p.Ile641Val missense_variant 0.62
embA 4245182 c.1950T>C synonymous_variant 0.71
embA 4245189 c.1957C>T synonymous_variant 0.83
embA 4245198 p.Leu656Ile missense_variant 0.8
embA 4245207 c.1975T>C synonymous_variant 0.8
embA 4245215 c.1983A>C synonymous_variant 1.0
embA 4245222 p.Tyr664Gln missense_variant 1.0
embA 4245248 c.2016G>C synonymous_variant 0.5
embA 4245257 c.2025A>G synonymous_variant 0.5
embA 4245263 c.2031A>G synonymous_variant 0.5
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4247932 c.1419C>G synonymous_variant 0.29
embB 4247945 c.1432T>C synonymous_variant 0.29
embB 4247951 p.Ser480Ala missense_variant 0.29
embB 4247956 c.1443G>C synonymous_variant 0.29
embB 4248007 c.1494C>G synonymous_variant 0.25
embB 4248011 p.Ser500Arg missense_variant 0.25
embB 4248014 p.Thr501Ala missense_variant 0.25
embB 4248035 p.Val508Ile missense_variant 0.3
embB 4248040 c.1527C>G synonymous_variant 0.3
embB 4248041 p.Ala510Thr missense_variant 0.3
embB 4248044 p.Lys511Ala missense_variant 0.3
embB 4248070 c.1557T>C synonymous_variant 0.33
embB 4248085 c.1572T>C synonymous_variant 0.4
embB 4248220 c.1707A>C synonymous_variant 0.67
embB 4248304 c.1791G>C synonymous_variant 0.5
embB 4248319 c.1806A>G synonymous_variant 0.5
embB 4249469 p.Leu986Met missense_variant 0.67
embB 4249486 c.2973T>G synonymous_variant 0.67
embB 4249498 c.2985G>C synonymous_variant 0.67
aftB 4268225 c.612G>C synonymous_variant 0.4
aftB 4268236 p.Leu201Met missense_variant 0.33
aftB 4268940 c.-104T>C upstream_gene_variant 0.5
aftB 4268946 c.-110G>A upstream_gene_variant 0.5
ubiA 4268951 p.Val295Ile missense_variant 0.5
aftB 4268952 c.-116G>C upstream_gene_variant 0.5
aftB 4268955 c.-119A>G upstream_gene_variant 0.5
aftB 4268958 c.-122A>C upstream_gene_variant 0.5
ubiA 4268969 p.Leu289Val missense_variant 0.5
aftB 4268985 c.-149A>G upstream_gene_variant 0.5
aftB 4268994 c.-158T>G upstream_gene_variant 0.5
aftB 4268999 c.-163C>T upstream_gene_variant 0.5
aftB 4269006 c.-170T>C upstream_gene_variant 0.5
aftB 4269012 c.-176G>C upstream_gene_variant 0.5
aftB 4269027 c.-191C>T upstream_gene_variant 0.5
aftB 4269033 c.-197T>C upstream_gene_variant 0.4
aftB 4269036 c.-200C>G upstream_gene_variant 0.4
aftB 4269042 c.-206G>C upstream_gene_variant 0.4
aftB 4269351 c.-515C>T upstream_gene_variant 1.0
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0