Rv0668 - c.2442T>C


Drug resistance types
59 Sensitive 30 RR-TB 143 HR-TB 71 MDR-TB 9 Pre-XDR-TB 2 XDR-TB 264 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3 10
M.canetti;lineage2.1;lineage4.9 26
lineage4.9 163
lineage4.8 8
23
lineage4.5 2
M.canetti;lineage2.1;lineage6.3 2
lineage4.1.2.1.1 1
La3 2
lineage4.3.2.1 1
lineage1.1.3.1 1
M.canetti;lineage4.9 3
lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.4.1 2
lineage1.1.2 3
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.9 21
lineage4.9;lineage6.3 8
lineage4.9;lineage7 5
La3;lineage2.2.1 2
lineage2.2.1 26
lineage4.8.1 2
La1.7;lineage4.9 10
La3;lineage2.1;lineage4.9 2
lineage3 9
lineage2.2 5
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.6.2.2 3
lineage4.3.3 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage2.2.1.1 4
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.1.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 5
La1.7.1 1
lineage4.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.1.2.1 21
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
La1.8.1 2
lineage4.2;lineage4.9 3
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1.2;lineage7 1
lineage4.6.1.1 3
La1.7 1
lineage4.3.4 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage1.1.2 1
lineage4 5
La3;M.canetti;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.1.1.3 3
lineage4.4.1.1 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 3
La3;lineage4.8 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9;lineage7 3
lineage1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage5.2 2
La1.7;M.canetti;lineage4.9 3
lineage4.1.1.1 4
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage6.2.3 1
La1.7;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.9.1 1
lineage4.7 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.4.2.1 3
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage2.2.1;lineage3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2.1 1
La1;lineage4.1.2 1
lineage3.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage2.2.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
lineage2.2.2 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1;lineage4.9 1
lineage4.2.2.2 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
La2;lineage4.9 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.1.2;lineage4 1
lineage4.1.1.2 1
La3;lineage4.3.4 1
lineage3.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 578
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 Other None
SRR3675449 Other M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4407452 Other lineage3 None
ERR4799513 HR-TB lineage2.2 None
SRR11972367 Sensitive lineage2.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045892 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR4813861 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR29097066 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675312 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1184381 MDR-TB None
SRR1173118 Other lineage2.2.1 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786671 Other None
SRR3675502 Sensitive lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR13837890 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR9786440 Other lineage4.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3797023 HR-TB La1.8.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR29055611 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR3675222 Other La1.7 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR2514327 HR-TB lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR11465604 HR-TB lineage4.8.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR11465025 Other lineage4.1.1.3 None
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR4798139 RR-TB lineage1.1.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR1063849 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
ERR12015083 Other La3;lineage4.8 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR779852 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3675311 Other lineage4.9 None
SRR26331611 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351341 Other lineage4.1.1.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
SRR29126406 RR-TB lineage2.2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR21690574 Other lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675243 Other lineage4.9 None
SRR3675572 Other None
SRR6046385 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR9787061 Sensitive lineage6.2.3 None
ERR4769444 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR26399239 Sensitive lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
SRR5007188 Sensitive lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675482 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341400 Sensitive lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR7496517 Other None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675284 Sensitive lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096170 Sensitive lineage4.4.1.2 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736856 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046066 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR6785527 Sensitive lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675494 RR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1184346 HR-TB lineage3.1 None
ERR212125 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR3675221 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28044634 Other lineage3 None
ERR2514692 Other None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096178 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1184372 MDR-TB None
SRR1173633 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
SRR6046141 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18289200 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR18213713 HR-TB None
SRR1175127 Other lineage2.2.1.2 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR176741 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR1035157 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6045347 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769457 Other lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4820854 Other lineage4.1.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
ERR3283044 Other lineage4 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR13285068 Sensitive lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR11081864 Other lineage3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR4816999 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29051077 Other lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR6359074 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3283021 HR-TB lineage4.9 None