TB-Profiler result

Run: SRR1180172
Summary

Run ID: SRR1180172

Sample name:

Date: 03-04-2023 03:49:04

Number of reads: 1635197

Percentage reads mapped: 54.92

Strain: lineage2.2.1

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.98
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.95
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247448 p.His312Arg missense_variant 0.27 ethambutol
embB 4247959 p.Met482Ile missense_variant 0.23 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6151 c.912C>T synonymous_variant 0.17
gyrB 6157 c.918C>T synonymous_variant 0.18
gyrB 6160 c.921C>G synonymous_variant 0.18
gyrB 6280 c.1041T>G synonymous_variant 0.18
gyrB 6286 c.1047T>C synonymous_variant 0.21
gyrB 6292 c.1053G>C synonymous_variant 0.24
gyrB 6295 c.1056A>G synonymous_variant 0.27
gyrA 6307 c.-995T>G upstream_gene_variant 0.29
gyrA 6331 c.-971A>G upstream_gene_variant 0.3
gyrA 6346 c.-956C>T upstream_gene_variant 0.32
gyrA 6355 c.-947G>A upstream_gene_variant 0.3
gyrA 6361 c.-941G>A upstream_gene_variant 0.29
gyrA 6362 c.-940_-938delTTGinsCTA upstream_gene_variant 0.3
gyrA 6379 c.-923C>G upstream_gene_variant 0.22
gyrA 6382 c.-920A>G upstream_gene_variant 0.22
gyrA 6388 c.-914T>C upstream_gene_variant 0.18
gyrA 6598 c.-704C>G upstream_gene_variant 0.2
gyrA 6610 c.-692C>G upstream_gene_variant 0.28
gyrA 6613 c.-689A>G upstream_gene_variant 0.28
gyrA 6616 c.-686A>G upstream_gene_variant 0.27
gyrA 6622 c.-680C>T upstream_gene_variant 0.26
gyrA 6631 c.-671C>G upstream_gene_variant 0.28
gyrA 6637 c.-665T>G upstream_gene_variant 0.28
gyrA 6640 c.-662A>G upstream_gene_variant 0.27
gyrA 6644 c.-658_-657delAGinsTC upstream_gene_variant 0.28
gyrA 6649 c.-653T>G upstream_gene_variant 0.31
gyrA 6673 c.-629A>C upstream_gene_variant 0.33
gyrA 6676 c.-626T>G upstream_gene_variant 0.33
gyrA 6680 c.-622C>T upstream_gene_variant 0.31
gyrA 6700 c.-602T>C upstream_gene_variant 0.29
gyrA 6703 c.-599G>C upstream_gene_variant 0.29
gyrA 6706 c.-596G>A upstream_gene_variant 0.3
gyrA 6709 c.-593A>G upstream_gene_variant 0.31
gyrA 6721 c.-581C>T upstream_gene_variant 0.31
gyrA 6730 c.-572A>G upstream_gene_variant 0.29
gyrA 6745 c.-557T>C upstream_gene_variant 0.3
gyrA 6781 c.-521C>T upstream_gene_variant 0.24
gyrA 6835 c.-467C>T upstream_gene_variant 0.16
gyrA 6872 c.-430T>C upstream_gene_variant 0.19
gyrA 6878 c.-424T>C upstream_gene_variant 0.2
gyrA 6904 c.-398C>G upstream_gene_variant 0.21
gyrB 6911 p.Asn558His missense_variant 0.2
gyrA 6916 c.-386G>T upstream_gene_variant 0.21
gyrA 6919 c.-383T>C upstream_gene_variant 0.19
gyrA 6941 c.-361C>T upstream_gene_variant 0.18
gyrA 7361 c.60C>T synonymous_variant 0.3
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7388 c.87C>A synonymous_variant 0.28
gyrA 7391 c.90C>T synonymous_variant 0.27
gyrA 7394 c.93T>C synonymous_variant 0.26
gyrA 7412 c.111C>G synonymous_variant 0.3
gyrA 7424 c.123G>A synonymous_variant 0.25
gyrA 7427 c.126G>C synonymous_variant 0.23
gyrA 7433 c.132G>T synonymous_variant 0.24
gyrA 7442 c.141G>C synonymous_variant 0.21
gyrA 7569 p.Ala90Ser missense_variant 0.18
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7595 c.294C>G synonymous_variant 0.23
gyrA 7601 c.300C>G synonymous_variant 0.21
gyrA 7625 c.324G>C synonymous_variant 0.21
gyrA 7760 c.459C>T synonymous_variant 0.23
gyrA 7763 c.462T>C synonymous_variant 0.26
gyrA 7784 c.483A>G synonymous_variant 0.34
gyrA 7793 c.492G>T synonymous_variant 0.4
gyrA 7799 c.498A>G synonymous_variant 0.39
gyrA 7832 c.531G>C synonymous_variant 0.38
gyrA 7835 c.534A>C synonymous_variant 0.38
gyrA 7838 c.537C>T synonymous_variant 0.41
gyrA 7841 c.540C>T synonymous_variant 0.38
gyrA 7859 c.558A>G synonymous_variant 0.31
gyrA 7865 c.564T>C synonymous_variant 0.24
gyrA 7886 c.585T>C synonymous_variant 0.15
gyrA 8090 c.789C>G synonymous_variant 0.18
gyrA 8096 c.795T>G synonymous_variant 0.22
gyrA 8099 c.798T>C synonymous_variant 0.23
gyrA 8121 c.820T>C synonymous_variant 0.29
gyrA 8156 c.855T>C synonymous_variant 0.35
gyrA 8168 c.867A>G synonymous_variant 0.37
gyrA 8177 c.876A>C synonymous_variant 0.37
gyrA 8207 c.906T>C synonymous_variant 0.28
gyrA 8213 c.912C>T synonymous_variant 0.28
gyrA 8219 c.918T>C synonymous_variant 0.28
gyrA 8222 c.921C>T synonymous_variant 0.25
gyrA 8225 c.924T>C synonymous_variant 0.22
gyrA 8228 c.927G>C synonymous_variant 0.24
gyrA 8234 c.933T>C synonymous_variant 0.24
gyrA 8235 c.934_936delTTAinsCTG synonymous_variant 0.24
gyrA 8247 p.Ile316Val missense_variant 0.32
gyrA 8252 c.951G>A synonymous_variant 0.31
gyrA 8264 c.963T>C synonymous_variant 0.36
gyrA 8283 p.Ile328Leu missense_variant 0.36
gyrA 8288 c.987T>C synonymous_variant 0.36
gyrA 8294 c.993T>C synonymous_variant 0.39
gyrA 8321 c.1020C>T synonymous_variant 0.42
gyrA 8324 c.1023T>C synonymous_variant 0.42
gyrA 8330 c.1029C>G synonymous_variant 0.4
gyrA 8337 c.1036_1038delCTAinsTTG synonymous_variant 0.36
gyrA 8340 p.Ala347Ser missense_variant 0.35
gyrA 8375 c.1074G>C synonymous_variant 0.23
gyrA 8382 p.Leu361Met missense_variant 0.22
gyrA 8393 c.1092T>C synonymous_variant 0.21
gyrA 8486 c.1185T>C synonymous_variant 0.18
gyrA 8492 c.1191G>C synonymous_variant 0.22
gyrA 8501 c.1200G>A synonymous_variant 0.31
gyrA 8507 c.1206C>T synonymous_variant 0.31
gyrA 8510 c.1209G>A synonymous_variant 0.33
gyrA 8516 c.1215T>C synonymous_variant 0.38
gyrA 8519 c.1218A>G synonymous_variant 0.4
gyrA 8528 c.1227G>C synonymous_variant 0.41
gyrA 8546 c.1245T>C synonymous_variant 0.45
gyrA 8552 c.1251C>G synonymous_variant 0.44
gyrA 8561 c.1260A>C synonymous_variant 0.45
gyrA 8576 c.1275C>G synonymous_variant 0.4
gyrA 8603 c.1302A>G synonymous_variant 0.36
gyrA 8609 c.1308G>C synonymous_variant 0.38
gyrA 8619 c.1318T>C synonymous_variant 0.35
gyrA 8636 c.1335A>C synonymous_variant 0.3
gyrA 8642 c.1341A>G synonymous_variant 0.29
gyrA 8645 c.1344C>T synonymous_variant 0.26
gyrA 8655 p.Ile452Val missense_variant 0.31
gyrA 8664 c.1363C>T synonymous_variant 0.32
gyrA 8672 c.1371A>G synonymous_variant 0.28
gyrA 8693 c.1392T>C synonymous_variant 0.25
gyrA 8699 c.1398A>G synonymous_variant 0.25
gyrA 8711 c.1410A>C synonymous_variant 0.19
gyrA 8731 p.Gly477Ala missense_variant 0.17
gyrA 8828 c.1527T>C synonymous_variant 0.2
gyrA 8829 c.1528T>C synonymous_variant 0.22
gyrA 8852 c.1551T>C synonymous_variant 0.25
gyrA 8855 c.1554C>G synonymous_variant 0.23
gyrA 8858 c.1557T>C synonymous_variant 0.23
gyrA 8867 c.1566A>G synonymous_variant 0.21
gyrA 8870 c.1569G>C synonymous_variant 0.2
gyrA 8873 c.1572A>C synonymous_variant 0.2
gyrA 8876 c.1575C>T synonymous_variant 0.21
gyrA 8897 c.1596T>C synonymous_variant 0.21
gyrA 8903 c.1602T>C synonymous_variant 0.22
gyrA 8915 c.1614A>G synonymous_variant 0.27
gyrA 8930 c.1629C>T synonymous_variant 0.3
gyrA 8933 c.1632G>A synonymous_variant 0.31
gyrA 8942 c.1641G>C synonymous_variant 0.28
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.24
gyrA 8957 c.1656C>T synonymous_variant 0.29
gyrA 8983 p.Cys561Ser missense_variant 0.33
gyrA 8987 c.1686C>G synonymous_variant 0.32
gyrA 8990 c.1689C>A synonymous_variant 0.33
gyrA 8998 p.Leu566Trp missense_variant 0.34
gyrA 9017 c.1716C>A synonymous_variant 0.3
gyrA 9023 c.1722A>G synonymous_variant 0.26
gyrA 9029 c.1728T>G synonymous_variant 0.21
gyrA 9032 c.1731T>C synonymous_variant 0.22
gyrA 9050 p.Asp583Glu missense_variant 0.25
gyrA 9051 c.1750T>C synonymous_variant 0.24
gyrA 9062 c.1761C>A synonymous_variant 0.18
gyrA 9080 c.1779G>T synonymous_variant 0.17
gyrA 9089 c.1788G>C synonymous_variant 0.22
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.26
gyrA 9119 c.1818A>G synonymous_variant 0.27
gyrA 9128 c.1827C>G synonymous_variant 0.31
gyrA 9143 c.1842T>C synonymous_variant 0.25
gyrA 9147 p.Gly616Ser missense_variant 0.24
gyrA 9153 p.Thr618Glu missense_variant 0.25
gyrA 9158 c.1857C>T synonymous_variant 0.28
gyrA 9161 c.1860C>G synonymous_variant 0.3
gyrA 9182 c.1881T>C synonymous_variant 0.29
gyrA 9185 c.1884C>T synonymous_variant 0.29
gyrA 9192 c.1891C>T synonymous_variant 0.3
gyrA 9197 c.1896G>C synonymous_variant 0.31
gyrA 9203 c.1902G>A synonymous_variant 0.4
gyrA 9230 c.1929T>C synonymous_variant 0.36
gyrA 9233 c.1932C>G synonymous_variant 0.37
gyrA 9239 c.1938C>T synonymous_variant 0.38
gyrA 9242 c.1941A>C synonymous_variant 0.38
gyrA 9248 c.1947G>C synonymous_variant 0.39
gyrA 9251 c.1950G>T synonymous_variant 0.38
gyrA 9267 p.Asn656Gly missense_variant 0.33
gyrA 9275 c.1974G>A synonymous_variant 0.33
gyrA 9284 c.1983T>C synonymous_variant 0.29
gyrA 9287 c.1986G>C synonymous_variant 0.29
gyrA 9296 c.1995T>C synonymous_variant 0.25
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 490781 c.-2T>G upstream_gene_variant 0.17
fgd1 490797 c.15G>A synonymous_variant 0.19
fgd1 490800 c.18A>T synonymous_variant 0.19
fgd1 490803 c.21T>A synonymous_variant 0.2
fgd1 490812 c.30A>G synonymous_variant 0.23
fgd1 490815 c.33G>T synonymous_variant 0.22
fgd1 490818 c.36C>T synonymous_variant 0.23
fgd1 490830 c.48A>C synonymous_variant 0.28
fgd1 490851 c.69A>G synonymous_variant 0.3
fgd1 490854 c.72C>T synonymous_variant 0.28
fgd1 490857 c.75C>G synonymous_variant 0.28
fgd1 490869 c.87C>A synonymous_variant 0.26
fgd1 490887 c.105G>C synonymous_variant 0.24
fgd1 490896 c.114C>T synonymous_variant 0.23
fgd1 490902 c.120T>C synonymous_variant 0.21
fgd1 490905 c.123T>C synonymous_variant 0.17
fgd1 490911 c.129T>G synonymous_variant 0.18
fgd1 491022 c.240C>G synonymous_variant 0.21
fgd1 491043 c.261T>C synonymous_variant 0.23
fgd1 491049 c.267T>C synonymous_variant 0.26
fgd1 491058 c.276C>G synonymous_variant 0.25
fgd1 491064 c.282A>C synonymous_variant 0.26
fgd1 491082 c.300T>C synonymous_variant 0.27
fgd1 491083 p.Val101Ile missense_variant 0.28
fgd1 491091 c.309T>C synonymous_variant 0.33
fgd1 491097 c.315G>C synonymous_variant 0.33
fgd1 491106 c.324T>C synonymous_variant 0.33
fgd1 491112 c.330G>C synonymous_variant 0.3
fgd1 491115 c.333G>C synonymous_variant 0.29
fgd1 491121 c.339A>G synonymous_variant 0.3
fgd1 491144 p.Ala121Glu missense_variant 0.26
fgd1 491166 c.384G>C synonymous_variant 0.16
fgd1 491168 p.Phe129Tyr missense_variant 0.17
fgd1 491259 c.477T>C synonymous_variant 0.19
fgd1 491283 p.Asp167Glu missense_variant 0.24
fgd1 491286 c.504G>C synonymous_variant 0.24
fgd1 491289 c.507C>T synonymous_variant 0.26
fgd1 491290 p.Val170Ile missense_variant 0.26
fgd1 491295 c.513C>G synonymous_variant 0.25
fgd1 491296 p.Val172Ile missense_variant 0.25
fgd1 491310 c.528C>G synonymous_variant 0.27
fgd1 491316 c.534C>A synonymous_variant 0.27
fgd1 491320 p.Ala180Gln missense_variant 0.26
fgd1 491331 c.549G>A synonymous_variant 0.26
fgd1 491340 c.558C>G synonymous_variant 0.22
fgd1 491349 c.567T>C synonymous_variant 0.23
fgd1 491491 p.Pro237Thr missense_variant 0.19
fgd1 491526 c.744T>C synonymous_variant 0.19
fgd1 491538 c.756G>C synonymous_variant 0.23
fgd1 491542 c.760T>C synonymous_variant 0.23
fgd1 491547 c.765A>C synonymous_variant 0.27
fgd1 491550 c.768T>C synonymous_variant 0.3
fgd1 491601 c.819T>C synonymous_variant 0.31
fgd1 491610 c.828A>G synonymous_variant 0.37
fgd1 491616 c.834A>G synonymous_variant 0.36
fgd1 491623 p.Ala281Thr missense_variant 0.32
fgd1 491637 c.855C>A synonymous_variant 0.3
fgd1 491640 c.858G>C synonymous_variant 0.28
fgd1 491649 c.867C>T synonymous_variant 0.17
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575713 c.366G>A synonymous_variant 0.19
mshA 575719 c.372C>T synonymous_variant 0.19
mshA 575734 c.387T>G synonymous_variant 0.21
mshA 575746 c.399C>G synonymous_variant 0.28
mshA 575761 c.414C>T synonymous_variant 0.21
mshA 575785 c.438T>C synonymous_variant 0.18
mshA 575821 c.474G>C synonymous_variant 0.3
mshA 575824 c.477T>A synonymous_variant 0.31
mshA 575851 c.504C>T synonymous_variant 0.35
mshA 575860 c.513G>A synonymous_variant 0.37
mshA 575864 c.517T>C synonymous_variant 0.37
mshA 575878 c.531A>G synonymous_variant 0.46
mshA 575884 c.537G>C synonymous_variant 0.46
mshA 575893 c.546C>G synonymous_variant 0.46
mshA 575905 c.558G>C synonymous_variant 0.54
mshA 575907 p.Ala187Val missense_variant 0.47
mshA 575916 p.Asp190Ala missense_variant 0.49
mshA 575924 p.Gly193Ile missense_variant 0.43
mshA 575944 c.597T>C synonymous_variant 0.34
mshA 575950 c.603C>G synonymous_variant 0.32
mshA 575971 c.624C>T synonymous_variant 0.34
mshA 576166 c.819C>A synonymous_variant 0.15
mshA 576193 c.846T>C synonymous_variant 0.19
mshA 576202 c.855T>G synonymous_variant 0.19
mshA 576205 c.858G>A synonymous_variant 0.18
mshA 576214 c.867G>A synonymous_variant 0.19
mshA 576220 c.873C>G synonymous_variant 0.2
mshA 576223 c.876G>C synonymous_variant 0.2
mshA 576233 p.Ile296Val missense_variant 0.2
mshA 576247 c.900A>C synonymous_variant 0.27
ccsA 619697 c.-194A>C upstream_gene_variant 0.17
ccsA 620307 c.417C>T synonymous_variant 0.19
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620760 c.870C>A synonymous_variant 0.16
ccsA 620773 p.Ile295Val missense_variant 0.19
ccsA 620778 c.888T>C synonymous_variant 0.18
ccsA 620781 c.891C>G synonymous_variant 0.19
ccsA 620783 p.Ala298Val missense_variant 0.19
ccsA 620787 c.897C>T synonymous_variant 0.19
ccsA 620809 c.919C>T synonymous_variant 0.22
ccsA 620829 c.939G>C synonymous_variant 0.2
ccsA 620835 c.945C>G synonymous_variant 0.2
ccsA 620844 c.954C>T synonymous_variant 0.19
rpoB 759621 c.-186_-185insT upstream_gene_variant 0.24
rpoB 759629 c.-178T>C upstream_gene_variant 0.19
rpoB 760088 c.282C>G synonymous_variant 0.3
rpoB 760091 c.285G>C synonymous_variant 0.31
rpoB 760101 c.295T>C synonymous_variant 0.3
rpoB 760112 c.306T>C synonymous_variant 0.33
rpoB 760115 c.309C>T synonymous_variant 0.34
rpoB 760118 c.312T>G synonymous_variant 0.31
rpoB 760121 c.315T>C synonymous_variant 0.36
rpoB 760130 p.Asp108Glu missense_variant 0.39
rpoB 760139 c.333A>G synonymous_variant 0.43
rpoB 760145 c.339C>G synonymous_variant 0.45
rpoB 760184 c.378A>G synonymous_variant 0.36
rpoB 760196 c.390C>G synonymous_variant 0.37
rpoB 760235 c.429T>C synonymous_variant 0.36
rpoB 760244 c.438G>C synonymous_variant 0.32
rpoB 760274 c.468G>A synonymous_variant 0.29
rpoB 760307 c.501T>C synonymous_variant 0.19
rpoB 760310 c.504G>C synonymous_variant 0.22
rpoB 760328 c.522G>C synonymous_variant 0.3
rpoB 760340 c.534G>T synonymous_variant 0.38
rpoB 760356 p.Thr184Ser missense_variant 0.34
rpoB 760361 c.555T>C synonymous_variant 0.35
rpoB 760370 c.564C>G synonymous_variant 0.34
rpoB 760376 p.Asp190Glu missense_variant 0.32
rpoB 760380 p.Thr192Leu missense_variant 0.32
rpoB 760403 c.597C>T synonymous_variant 0.41
rpoB 760415 c.609C>T synonymous_variant 0.38
rpoB 760424 c.618C>G synonymous_variant 0.37
rpoB 760430 c.624T>C synonymous_variant 0.36
rpoB 760475 c.669A>G synonymous_variant 0.36
rpoB 760478 c.672C>T synonymous_variant 0.34
rpoB 760481 c.675G>T synonymous_variant 0.36
rpoB 760484 c.678A>G synonymous_variant 0.36
rpoB 760522 p.Ser239Asn missense_variant 0.34
rpoB 760533 p.Val243His missense_variant 0.29
rpoB 760547 c.741G>C synonymous_variant 0.33
rpoB 760556 c.750G>A synonymous_variant 0.36
rpoB 760563 p.Arg253Met missense_variant 0.35
rpoB 760591 p.Val262Ala missense_variant 0.35
rpoB 760598 c.792C>T synonymous_variant 0.32
rpoB 760611 c.805T>C synonymous_variant 0.3
rpoB 760646 c.840C>G synonymous_variant 0.27
rpoB 760655 c.849A>G synonymous_variant 0.25
rpoB 760661 c.855A>C synonymous_variant 0.26
rpoB 760670 c.864G>C synonymous_variant 0.26
rpoB 760674 c.868T>C synonymous_variant 0.27
rpoB 760679 c.873A>G synonymous_variant 0.26
rpoB 760683 c.877T>C synonymous_variant 0.24
rpoB 760724 c.918T>C synonymous_variant 0.27
rpoB 760730 c.924T>C synonymous_variant 0.3
rpoB 760748 c.942C>G synonymous_variant 0.23
rpoB 760751 c.945G>C synonymous_variant 0.22
rpoB 760754 c.948G>C synonymous_variant 0.22
rpoB 760755 p.His317Asn missense_variant 0.22
rpoB 760759 p.Val318Ala missense_variant 0.22
rpoB 760763 c.957C>T synonymous_variant 0.2
rpoB 760769 c.963C>G synonymous_variant 0.21
rpoB 760817 c.1011A>G synonymous_variant 0.22
rpoB 760820 c.1014T>C synonymous_variant 0.24
rpoB 760826 c.1020C>G synonymous_variant 0.21
rpoB 760830 c.1024T>C synonymous_variant 0.2
rpoB 760841 c.1035T>C synonymous_variant 0.2
rpoB 760845 p.Thr347Ser missense_variant 0.19
rpoB 760850 c.1044G>C synonymous_variant 0.18
rpoB 760856 c.1050C>G synonymous_variant 0.19
rpoB 760862 c.1056G>C synonymous_variant 0.24
rpoB 760869 p.Val355Thr missense_variant 0.29
rpoB 760877 c.1071G>T synonymous_variant 0.38
rpoB 760886 c.1080A>G synonymous_variant 0.37
rpoB 760916 c.1110C>T synonymous_variant 0.33
rpoB 760919 c.1113C>T synonymous_variant 0.32
rpoB 760925 c.1119T>C synonymous_variant 0.33
rpoB 760928 c.1122G>C synonymous_variant 0.33
rpoB 760931 c.1125C>G synonymous_variant 0.33
rpoB 760946 c.1140A>G synonymous_variant 0.39
rpoB 760964 c.1158C>T synonymous_variant 0.41
rpoB 760970 c.1164G>C synonymous_variant 0.42
rpoB 760982 c.1176G>T synonymous_variant 0.43
rpoB 760985 c.1179G>C synonymous_variant 0.41
rpoB 760991 c.1185G>C synonymous_variant 0.42
rpoB 761006 c.1200C>G synonymous_variant 0.45
rpoB 761015 c.1209G>C synonymous_variant 0.49
rpoB 761021 c.1215G>C synonymous_variant 0.53
rpoB 761027 c.1221A>G synonymous_variant 0.52
rpoB 761036 c.1230G>C synonymous_variant 0.51
rpoB 761037 c.1231T>C synonymous_variant 0.51
rpoB 761057 c.1251G>C synonymous_variant 0.5
rpoB 761097 c.1291_1292delAGinsTC synonymous_variant 0.4
rpoB 761102 c.1296A>G synonymous_variant 0.4
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 0.29
rpoB 761150 c.1344A>C synonymous_variant 0.24
rpoB 761165 c.1359G>A synonymous_variant 0.26
rpoB 761168 c.1362C>G synonymous_variant 0.24
rpoB 761180 c.1374A>G synonymous_variant 0.36
rpoB 761189 c.1383T>C synonymous_variant 0.36
rpoB 761192 c.1386C>G synonymous_variant 0.37
rpoB 761195 c.1389G>C synonymous_variant 0.37
rpoB 761198 c.1392G>C synonymous_variant 0.35
rpoB 761204 c.1398C>T synonymous_variant 0.36
rpoB 761207 c.1401C>T synonymous_variant 0.36
rpoB 761240 c.1434C>T synonymous_variant 0.42
rpoB 761249 c.1443A>G synonymous_variant 0.46
rpoB 761255 c.1449T>G synonymous_variant 0.46
rpoB 761264 c.1458C>G synonymous_variant 0.43
rpoB 761282 c.1476C>G synonymous_variant 0.46
rpoB 761327 c.1521A>G synonymous_variant 0.47
rpoB 761354 c.1548C>T synonymous_variant 0.47
rpoB 761360 c.1554T>C synonymous_variant 0.46
rpoB 761367 p.Glu521Gln missense_variant 0.41
rpoB 761374 p.Val523Asp missense_variant 0.39
rpoB 761408 c.1602G>C synonymous_variant 0.37
rpoB 761414 c.1608A>G synonymous_variant 0.41
rpoB 761423 c.1617T>C synonymous_variant 0.43
rpoB 761435 c.1629T>C synonymous_variant 0.38
rpoB 761438 c.1632G>C synonymous_variant 0.38
rpoB 761444 c.1638T>C synonymous_variant 0.37
rpoB 761452 p.Val549Glu missense_variant 0.33
rpoB 761457 p.Pro551Ser missense_variant 0.31
rpoB 761465 c.1659G>T synonymous_variant 0.33
rpoB 761471 c.1665C>T synonymous_variant 0.32
rpoB 761477 c.1671C>T synonymous_variant 0.31
rpoB 761483 c.1677G>C synonymous_variant 0.29
rpoB 761492 c.1686G>C synonymous_variant 0.33
rpoB 761504 c.1698C>G synonymous_variant 0.32
rpoB 761510 c.1704T>C synonymous_variant 0.37
rpoB 761516 c.1710G>C synonymous_variant 0.42
rpoB 761531 c.1725C>G synonymous_variant 0.42
rpoB 761537 c.1731C>G synonymous_variant 0.43
rpoB 761540 c.1734C>T synonymous_variant 0.43
rpoB 761561 c.1755C>G synonymous_variant 0.48
rpoB 761564 c.1758G>C synonymous_variant 0.51
rpoB 761573 c.1767C>G synonymous_variant 0.57
rpoB 761579 c.1773G>C synonymous_variant 0.57
rpoB 761582 c.1776G>A synonymous_variant 0.6
rpoB 761606 c.1800C>G synonymous_variant 0.49
rpoB 761612 c.1806G>T synonymous_variant 0.47
rpoB 761615 c.1809A>C synonymous_variant 0.47
rpoB 761636 c.1830G>T synonymous_variant 0.48
rpoB 761645 c.1839C>G synonymous_variant 0.42
rpoB 761648 c.1842T>C synonymous_variant 0.44
rpoB 761657 c.1851C>G synonymous_variant 0.42
rpoB 761666 c.1860G>C synonymous_variant 0.38
rpoB 761669 c.1863C>T synonymous_variant 0.35
rpoB 761675 c.1869G>T synonymous_variant 0.29
rpoB 761690 c.1884G>C synonymous_variant 0.27
rpoB 761750 c.1944G>C synonymous_variant 0.27
rpoB 761765 c.1959T>C synonymous_variant 0.31
rpoB 761772 p.His656Ala missense_variant 0.29
rpoB 761778 p.Asn658Asp missense_variant 0.3
rpoB 761786 c.1980C>A synonymous_variant 0.33
rpoB 761791 p.Arg662His missense_variant 0.32
rpoB 761813 c.2007T>C synonymous_variant 0.38
rpoB 761819 c.2013G>A synonymous_variant 0.37
rpoB 761834 c.2028T>C synonymous_variant 0.39
rpoB 761848 p.Cys681Ser missense_variant 0.38
rpoB 761852 c.2046C>G synonymous_variant 0.41
rpoB 761858 c.2052G>C synonymous_variant 0.47
rpoB 761864 c.2058G>C synonymous_variant 0.5
rpoB 761867 c.2061C>A synonymous_variant 0.62
rpoB 761873 c.2067A>C synonymous_variant 0.66
rpoB 761885 c.2079T>C synonymous_variant 0.5
rpoB 761906 c.2100C>G synonymous_variant 0.4
rpoB 761909 c.2103T>C synonymous_variant 0.38
rpoB 761912 c.2106T>C synonymous_variant 0.37
rpoB 761915 p.Asp703Glu missense_variant 0.36
rpoB 761916 p.Asp704Asn missense_variant 0.35
rpoB 761921 c.2115C>T synonymous_variant 0.36
rpoB 761933 c.2127G>C synonymous_variant 0.38
rpoB 761954 c.2148C>G synonymous_variant 0.28
rpoB 761955 p.Ile717Val missense_variant 0.26
rpoB 761969 c.2163G>A synonymous_variant 0.28
rpoB 761999 c.2193G>C synonymous_variant 0.38
rpoB 762014 c.2208C>T synonymous_variant 0.44
rpoB 762017 c.2211A>G synonymous_variant 0.48
rpoB 762050 c.2244G>A synonymous_variant 0.47
rpoB 762053 c.2247T>C synonymous_variant 0.45
rpoB 762065 c.2259T>C synonymous_variant 0.41
rpoB 762083 c.2277T>C synonymous_variant 0.34
rpoB 762086 c.2280G>C synonymous_variant 0.37
rpoB 762101 c.2295C>G synonymous_variant 0.41
rpoB 762114 p.Ile770Val missense_variant 0.44
rpoB 762138 c.2332C>T synonymous_variant 0.43
rpoB 762143 c.2337T>C synonymous_variant 0.47
rpoB 762149 c.2343G>C synonymous_variant 0.48
rpoB 762179 c.2373C>T synonymous_variant 0.55
rpoB 762185 c.2379G>C synonymous_variant 0.53
rpoB 762239 c.2433G>A synonymous_variant 0.41
rpoB 762254 c.2448T>G synonymous_variant 0.36
rpoB 762257 c.2451C>G synonymous_variant 0.38
rpoB 762284 c.2478G>C synonymous_variant 0.35
rpoB 762293 c.2487T>C synonymous_variant 0.4
rpoB 762314 c.2508C>T synonymous_variant 0.3
rpoB 762317 c.2511A>G synonymous_variant 0.29
rpoB 762347 c.2541T>C synonymous_variant 0.37
rpoB 762350 c.2544C>G synonymous_variant 0.36
rpoB 762362 p.Glu852Asp missense_variant 0.35
rpoB 762368 c.2562G>A synonymous_variant 0.33
rpoB 762369 c.2563T>C synonymous_variant 0.31
rpoC 762374 c.-996G>C upstream_gene_variant 0.3
rpoC 762395 c.-975G>C upstream_gene_variant 0.33
rpoC 762398 c.-972T>C upstream_gene_variant 0.29
rpoC 762401 c.-969G>T upstream_gene_variant 0.29
rpoC 762404 c.-966T>C upstream_gene_variant 0.29
rpoC 762410 c.-960T>C upstream_gene_variant 0.41
rpoC 762416 c.-954A>G upstream_gene_variant 0.44
rpoC 762443 c.-927G>C upstream_gene_variant 0.36
rpoC 762449 c.-921C>A upstream_gene_variant 0.35
rpoC 762452 c.-918G>C upstream_gene_variant 0.37
rpoC 762470 c.-900G>C upstream_gene_variant 0.42
rpoC 762491 c.-879T>C upstream_gene_variant 0.35
rpoB 762507 p.Leu901Met missense_variant 0.33
rpoB 762510 p.Ala902Pro missense_variant 0.32
rpoC 762524 c.-846G>C upstream_gene_variant 0.3
rpoC 762533 c.-837T>C upstream_gene_variant 0.25
rpoC 762536 c.-834T>C upstream_gene_variant 0.24
rpoC 762537 c.-833T>C upstream_gene_variant 0.24
rpoC 762551 c.-819C>T upstream_gene_variant 0.21
rpoC 762710 c.-660G>T upstream_gene_variant 0.15
rpoC 762749 c.-621C>G upstream_gene_variant 0.24
rpoC 762753 c.-617T>C upstream_gene_variant 0.24
rpoC 762758 c.-612G>C upstream_gene_variant 0.26
rpoC 762782 c.-588T>C upstream_gene_variant 0.27
rpoC 762788 c.-582G>C upstream_gene_variant 0.28
rpoB 762789 p.Leu995Met missense_variant 0.28
rpoC 762794 c.-576C>G upstream_gene_variant 0.29
rpoB 762795 p.Asp997Asn missense_variant 0.32
rpoC 762800 c.-570C>A upstream_gene_variant 0.32
rpoC 762812 c.-558C>G upstream_gene_variant 0.31
rpoB 762814 p.Met1003Arg missense_variant 0.32
rpoC 762818 c.-552C>G upstream_gene_variant 0.34
rpoC 762824 c.-546C>T upstream_gene_variant 0.37
rpoC 762827 c.-543G>T upstream_gene_variant 0.38
rpoC 762833 c.-537C>T upstream_gene_variant 0.39
rpoC 762857 c.-513C>G upstream_gene_variant 0.37
rpoC 762860 c.-510G>C upstream_gene_variant 0.37
rpoC 762863 c.-507T>C upstream_gene_variant 0.38
rpoC 762920 c.-450C>G upstream_gene_variant 0.48
rpoC 762929 c.-441G>T upstream_gene_variant 0.48
rpoC 762962 c.-408C>T upstream_gene_variant 0.44
rpoC 762983 c.-387C>A upstream_gene_variant 0.46
rpoC 762989 c.-381G>A upstream_gene_variant 0.46
rpoC 762995 c.-375G>T upstream_gene_variant 0.45
rpoC 763028 c.-342T>C upstream_gene_variant 0.42
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.44
rpoC 763040 c.-330C>G upstream_gene_variant 0.48
rpoC 763070 c.-300T>C upstream_gene_variant 0.49
rpoC 763082 c.-288C>G upstream_gene_variant 0.49
rpoC 763085 c.-285C>G upstream_gene_variant 0.47
rpoC 763103 c.-267G>A upstream_gene_variant 0.49
rpoC 763115 c.-255T>C upstream_gene_variant 0.46
rpoC 763127 c.-243G>C upstream_gene_variant 0.43
rpoC 763133 c.-237G>C upstream_gene_variant 0.35
rpoC 763136 c.-234C>T upstream_gene_variant 0.33
rpoC 763158 c.-212C>T upstream_gene_variant 0.35
rpoC 763166 c.-204A>G upstream_gene_variant 0.29
rpoC 763169 c.-201A>G upstream_gene_variant 0.29
rpoC 763193 c.-177C>T upstream_gene_variant 0.21
rpoC 763199 c.-171G>T upstream_gene_variant 0.2
rpoC 763202 c.-168A>G upstream_gene_variant 0.21
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.2
rpoC 763211 c.-159C>T upstream_gene_variant 0.19
rpoC 763235 c.-135A>G upstream_gene_variant 0.18
rpoC 763238 c.-132T>C upstream_gene_variant 0.16
rpoC 763352 c.-18T>A upstream_gene_variant 0.15
rpoC 763402 c.33C>T synonymous_variant 0.37
rpoC 763408 c.39T>C synonymous_variant 0.34
rpoC 763411 c.42T>G synonymous_variant 0.34
rpoC 763414 c.45T>C synonymous_variant 0.35
rpoC 763423 c.54G>A synonymous_variant 0.38
rpoC 763441 c.72C>T synonymous_variant 0.43
rpoC 763444 c.75T>C synonymous_variant 0.42
rpoC 763456 c.87A>G synonymous_variant 0.4
rpoC 763486 c.117T>C synonymous_variant 0.54
rpoC 763492 c.123G>C synonymous_variant 0.55
rpoC 763528 c.159G>A synonymous_variant 0.61
rpoC 763546 c.177A>G synonymous_variant 0.59
rpoC 763570 c.201G>A synonymous_variant 0.57
rpoC 763573 c.204G>T synonymous_variant 0.59
rpoC 763594 c.225C>T synonymous_variant 0.59
rpoC 763615 c.246G>A synonymous_variant 0.49
rpoC 763618 c.249C>T synonymous_variant 0.49
rpoC 763621 c.252C>G synonymous_variant 0.49
rpoC 763636 c.267T>G synonymous_variant 0.48
rpoC 763660 c.291T>G synonymous_variant 0.36
rpoC 763669 c.300C>G synonymous_variant 0.4
rpoC 763675 c.306C>G synonymous_variant 0.38
rpoC 763681 c.312C>A synonymous_variant 0.38
rpoC 763702 c.333C>G synonymous_variant 0.36
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.35
rpoC 763714 c.345G>C synonymous_variant 0.43
rpoC 763723 c.354G>C synonymous_variant 0.44
rpoC 763732 c.363C>G synonymous_variant 0.42
rpoC 763741 c.372C>T synonymous_variant 0.44
rpoC 763744 c.375G>C synonymous_variant 0.43
rpoC 763765 c.396T>C synonymous_variant 0.43
rpoC 763768 c.399C>T synonymous_variant 0.4
rpoC 763781 p.Ser138Ala missense_variant 0.42
rpoC 763792 p.Glu141Asp missense_variant 0.4
rpoC 763807 c.438T>C synonymous_variant 0.45
rpoC 763816 c.447C>G synonymous_variant 0.43
rpoC 763836 p.Ala156Val missense_variant 0.43
rpoC 763855 c.486C>T synonymous_variant 0.41
rpoC 763858 c.489A>G synonymous_variant 0.41
rpoC 763872 p.Gly168Ala missense_variant 0.39
rpoC 763876 p.Glu169Asp missense_variant 0.38
rpoC 763879 c.510A>G synonymous_variant 0.41
rpoC 763888 c.519G>T synonymous_variant 0.4
rpoC 763894 c.525A>G synonymous_variant 0.42
rpoC 763924 c.555G>A synonymous_variant 0.38
rpoC 763936 c.567C>G synonymous_variant 0.41
rpoC 763939 c.570G>A synonymous_variant 0.4
rpoC 763969 c.600C>T synonymous_variant 0.42
rpoC 763978 c.609C>T synonymous_variant 0.4
rpoC 763991 p.Ile208Leu missense_variant 0.46
rpoC 763996 c.627T>C synonymous_variant 0.46
rpoC 764002 c.633C>G synonymous_variant 0.48
rpoC 764005 c.636G>C synonymous_variant 0.49
rpoC 764024 c.655T>C synonymous_variant 0.47
rpoC 764040 p.Ser224Thr missense_variant 0.41
rpoC 764044 c.675T>G synonymous_variant 0.42
rpoC 764056 c.687G>T synonymous_variant 0.44
rpoC 764059 c.690G>T synonymous_variant 0.48
rpoC 764080 c.711C>T synonymous_variant 0.49
rpoC 764083 c.714A>G synonymous_variant 0.47
rpoC 764098 c.729A>G synonymous_variant 0.5
rpoC 764131 c.762T>G synonymous_variant 0.42
rpoC 764188 c.819A>G synonymous_variant 0.37
rpoC 764194 p.Glu275Asp missense_variant 0.32
rpoC 764195 p.Ser276Ile missense_variant 0.32
rpoC 764203 c.834G>T synonymous_variant 0.36
rpoC 764206 c.837T>C synonymous_variant 0.37
rpoC 764218 c.849C>T synonymous_variant 0.42
rpoC 764242 c.873C>T synonymous_variant 0.36
rpoC 764245 c.876C>G synonymous_variant 0.34
rpoC 764248 c.879C>G synonymous_variant 0.34
rpoC 764254 c.885G>A synonymous_variant 0.37
rpoC 764260 c.891G>A synonymous_variant 0.4
rpoC 764263 c.894G>C synonymous_variant 0.38
rpoC 764278 c.909A>G synonymous_variant 0.4
rpoC 764317 c.948C>G synonymous_variant 0.42
rpoC 764320 c.951C>T synonymous_variant 0.42
rpoC 764339 c.970C>T synonymous_variant 0.48
rpoC 764353 c.984G>T synonymous_variant 0.48
rpoC 764365 c.996C>T synonymous_variant 0.4
rpoC 764387 c.1018T>C synonymous_variant 0.33
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.27
rpoC 764428 c.1059G>T synonymous_variant 0.27
rpoC 764431 c.1062G>C synonymous_variant 0.26
rpoC 764434 c.1065A>G synonymous_variant 0.24
rpoC 764446 c.1077T>C synonymous_variant 0.22
rpoC 764449 c.1080G>C synonymous_variant 0.23
rpoC 764452 c.1083T>G synonymous_variant 0.23
rpoC 764455 c.1086G>T synonymous_variant 0.25
rpoC 764458 c.1089G>C synonymous_variant 0.24
rpoC 764461 c.1092A>G synonymous_variant 0.25
rpoC 764497 c.1128A>G synonymous_variant 0.23
rpoC 764500 c.1131C>G synonymous_variant 0.24
rpoC 764521 c.1152T>C synonymous_variant 0.32
rpoC 764536 c.1167G>C synonymous_variant 0.47
rpoC 764539 c.1170C>G synonymous_variant 0.48
rpoC 764548 c.1179G>A synonymous_variant 0.42
rpoC 764554 c.1185C>T synonymous_variant 0.47
rpoC 764575 c.1206T>G synonymous_variant 0.38
rpoC 764578 c.1209C>G synonymous_variant 0.36
rpoC 764611 c.1242G>T synonymous_variant 0.35
rpoC 764626 c.1257C>T synonymous_variant 0.29
rpoC 764650 c.1281G>T synonymous_variant 0.32
rpoC 764668 c.1299C>T synonymous_variant 0.31
rpoC 764752 c.1383G>C synonymous_variant 0.25
rpoC 764764 c.1395T>C synonymous_variant 0.28
rpoC 764797 c.1428G>C synonymous_variant 0.21
rpoC 764809 c.1440C>T synonymous_variant 0.16
rpoC 764833 c.1464A>G synonymous_variant 0.2
rpoC 764857 c.1488G>T synonymous_variant 0.32
rpoC 764858 c.1489T>C synonymous_variant 0.32
rpoC 764872 c.1503A>G synonymous_variant 0.34
rpoC 764875 c.1506C>G synonymous_variant 0.32
rpoC 764887 c.1518G>A synonymous_variant 0.31
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 0.31
rpoC 764893 c.1524T>C synonymous_variant 0.3
rpoC 764896 c.1527C>T synonymous_variant 0.3
rpoC 764902 c.1533C>T synonymous_variant 0.32
rpoC 764908 c.1539G>A synonymous_variant 0.33
rpoC 764923 c.1554A>G synonymous_variant 0.33
rpoC 764948 c.1579T>C synonymous_variant 0.23
rpoC 764953 c.1584G>C synonymous_variant 0.22
rpoC 764968 c.1599T>C synonymous_variant 0.18
rpoC 764983 c.1614T>C synonymous_variant 0.18
rpoC 764995 c.1626C>T synonymous_variant 0.16
rpoC 765007 c.1638T>G synonymous_variant 0.18
rpoC 765008 c.1639T>C synonymous_variant 0.2
rpoC 765019 c.1650A>G synonymous_variant 0.24
rpoC 765040 c.1671T>C synonymous_variant 0.27
rpoC 765041 c.1672T>C synonymous_variant 0.27
rpoC 765047 c.1678T>C synonymous_variant 0.27
rpoC 765052 c.1683C>G synonymous_variant 0.26
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.26
rpoC 765073 c.1704G>C synonymous_variant 0.18
rpoC 765082 c.1713G>C synonymous_variant 0.17
rpoC 765085 c.1716T>C synonymous_variant 0.16
rpoC 765319 c.1950A>G synonymous_variant 0.21
rpoC 765328 p.His653Gln missense_variant 0.26
rpoC 765330 p.Ser654Asn missense_variant 0.25
rpoC 765334 c.1965C>T synonymous_variant 0.29
rpoC 765343 c.1974G>A synonymous_variant 0.3
rpoC 765352 c.1983G>C synonymous_variant 0.32
rpoC 765367 c.1998C>G synonymous_variant 0.36
rpoC 765370 c.2001G>C synonymous_variant 0.39
rpoC 765383 p.Met672Leu missense_variant 0.41
rpoC 765404 c.2035C>T synonymous_variant 0.45
rpoC 765409 c.2040T>C synonymous_variant 0.43
rpoC 765412 c.2043T>C synonymous_variant 0.46
rpoC 765421 c.2052C>G synonymous_variant 0.43
rpoC 765451 c.2082C>T synonymous_variant 0.42
rpoC 765478 c.2109T>C synonymous_variant 0.39
rpoC 765499 c.2130C>A synonymous_variant 0.34
rpoC 765529 c.2160C>T synonymous_variant 0.31
rpoC 765541 c.2172C>G synonymous_variant 0.26
rpoC 765547 c.2178C>A synonymous_variant 0.29
rpoC 765556 c.2187G>C synonymous_variant 0.32
rpoC 765562 c.2193G>C synonymous_variant 0.33
rpoC 765578 c.2209C>T synonymous_variant 0.34
rpoC 765583 c.2214G>T synonymous_variant 0.36
rpoC 765592 c.2223C>T synonymous_variant 0.39
rpoC 765622 p.Glu751Asp missense_variant 0.36
rpoC 765625 c.2256C>G synonymous_variant 0.32
rpoC 765628 c.2259G>C synonymous_variant 0.33
rpoC 765658 c.2289C>T synonymous_variant 0.35
rpoC 765685 c.2316G>A synonymous_variant 0.3
rpoC 765700 c.2331T>C synonymous_variant 0.34
rpoC 765728 p.Gln787Lys missense_variant 0.48
rpoC 765734 c.2365T>C synonymous_variant 0.46
rpoC 765739 c.2370G>T synonymous_variant 0.47
rpoC 765751 c.2382C>G synonymous_variant 0.42
rpoC 765753 p.Asp795Ala missense_variant 0.43
rpoC 765772 c.2403C>G synonymous_variant 0.36
rpoC 765784 c.2415C>G synonymous_variant 0.41
rpoC 765787 c.2418C>T synonymous_variant 0.41
rpoC 765793 c.2424C>G synonymous_variant 0.4
rpoC 765796 c.2427C>T synonymous_variant 0.37
rpoC 765811 c.2442T>C synonymous_variant 0.41
rpoC 765826 c.2457T>C synonymous_variant 0.42
rpoC 765835 c.2466C>T synonymous_variant 0.43
rpoC 765883 c.2514C>G synonymous_variant 0.57
rpoC 765886 c.2517C>G synonymous_variant 0.57
rpoC 765892 c.2523T>C synonymous_variant 0.58
rpoC 765907 c.2538G>A synonymous_variant 0.6
rpoC 765928 c.2559C>G synonymous_variant 0.62
rpoC 765952 c.2583G>C synonymous_variant 0.57
rpoC 765967 c.2598C>T synonymous_variant 0.51
rpoC 765973 c.2604C>G synonymous_variant 0.44
rpoC 765979 c.2610C>G synonymous_variant 0.43
rpoC 765982 c.2613C>T synonymous_variant 0.41
rpoC 765991 c.2622C>T synonymous_variant 0.39
rpoC 765994 c.2625A>T synonymous_variant 0.38
rpoC 766003 c.2634G>A synonymous_variant 0.33
rpoC 766009 c.2640G>C synonymous_variant 0.26
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.26
rpoC 766021 c.2652G>C synonymous_variant 0.4
rpoC 766027 c.2658G>C synonymous_variant 0.42
rpoC 766043 p.Gln892Glu missense_variant 0.4
rpoC 766061 p.Val898Ile missense_variant 0.37
rpoC 766082 p.Ala905Gln missense_variant 0.35
rpoC 766096 c.2727G>T synonymous_variant 0.39
rpoC 766105 c.2736C>T synonymous_variant 0.41
rpoC 766129 c.2760C>G synonymous_variant 0.39
rpoC 766135 c.2766G>A synonymous_variant 0.38
rpoC 766141 c.2772C>T synonymous_variant 0.38
rpoC 766142 c.2773C>T synonymous_variant 0.39
rpoC 766148 p.Thr927Ala missense_variant 0.38
rpoC 766178 p.Ile937Val missense_variant 0.33
rpoC 766185 p.Glu939Ala missense_variant 0.28
rpoC 766192 c.2823T>C synonymous_variant 0.26
rpoC 766193 p.Gln942Glu missense_variant 0.21
rpoC 766273 c.2904T>C synonymous_variant 0.24
rpoC 766274 p.Ala969Thr missense_variant 0.24
rpoC 766280 p.Ser971Gly missense_variant 0.24
rpoC 766288 c.2919C>T synonymous_variant 0.3
rpoC 766294 c.2925C>T synonymous_variant 0.27
rpoC 766315 c.2946C>G synonymous_variant 0.32
rpoC 766333 c.2964G>C synonymous_variant 0.35
rpoC 766345 c.2976T>C synonymous_variant 0.35
rpoC 766348 c.2979A>G synonymous_variant 0.33
rpoC 766357 c.2988C>T synonymous_variant 0.33
rpoC 766363 c.2994G>C synonymous_variant 0.36
rpoC 766369 c.3000C>G synonymous_variant 0.38
rpoC 766381 c.3012C>T synonymous_variant 0.42
rpoC 766384 c.3015A>G synonymous_variant 0.42
rpoC 766390 c.3021C>T synonymous_variant 0.44
rpoC 766402 c.3033C>G synonymous_variant 0.48
rpoC 766408 c.3039C>T synonymous_variant 0.48
rpoC 766426 c.3057C>T synonymous_variant 0.55
rpoC 766456 c.3087C>G synonymous_variant 0.54
rpoC 766486 c.3117A>G synonymous_variant 0.6
rpoC 766492 c.3123T>A synonymous_variant 0.6
rpoC 766500 p.Ala1044Val missense_variant 0.37
rpoC 766522 c.3153C>G synonymous_variant 0.51
rpoC 766530 p.Arg1054Gln missense_variant 0.52
rpoC 766540 c.3171C>T synonymous_variant 0.52
rpoC 766543 c.3174C>T synonymous_variant 0.54
rpoC 766549 c.3180G>C synonymous_variant 0.6
rpoC 766570 c.3201T>C synonymous_variant 0.57
rpoC 766573 c.3204T>C synonymous_variant 0.56
rpoC 766579 c.3210C>T synonymous_variant 0.55
rpoC 766585 c.3216T>C synonymous_variant 0.57
rpoC 766594 c.3225G>C synonymous_variant 0.58
rpoC 766607 p.Ile1080Leu missense_variant 0.59
rpoC 766657 c.3288A>G synonymous_variant 0.57
rpoC 766660 c.3291G>A synonymous_variant 0.57
rpoC 766666 c.3297C>T synonymous_variant 0.6
rpoC 766672 c.3303T>C synonymous_variant 0.6
rpoC 766726 c.3357T>C synonymous_variant 0.57
rpoC 766738 c.3369G>C synonymous_variant 0.57
rpoC 766765 c.3396A>C synonymous_variant 0.57
rpoC 766769 c.3400C>T synonymous_variant 0.59
rpoC 766774 c.3405T>C synonymous_variant 0.56
rpoC 766801 c.3432C>A synonymous_variant 0.55
rpoC 766804 c.3435A>G synonymous_variant 0.57
rpoC 766861 c.3492G>C synonymous_variant 0.44
rpoC 766864 c.3495G>C synonymous_variant 0.39
rpoC 766879 c.3510G>C synonymous_variant 0.33
rpoC 766882 c.3513C>T synonymous_variant 0.31
rpoC 766883 p.Ser1172Ala missense_variant 0.31
rpoC 766888 c.3519G>C synonymous_variant 0.3
rpoC 766894 c.3525T>C synonymous_variant 0.28
rpoC 766895 c.3526T>C synonymous_variant 0.3
rpoC 766900 c.3531T>G synonymous_variant 0.31
rpoC 766903 c.3534C>T synonymous_variant 0.31
rpoC 766918 c.3549C>T synonymous_variant 0.32
rpoC 766933 c.3564A>G synonymous_variant 0.23
rpoC 766954 c.3585C>T synonymous_variant 0.17
rpoC 766963 c.3594T>C synonymous_variant 0.23
rpoC 766972 c.3603G>C synonymous_variant 0.3
rpoC 766978 c.3609C>T synonymous_variant 0.34
rpoC 766996 c.3627C>T synonymous_variant 0.4
rpoC 767002 c.3633G>C synonymous_variant 0.38
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.4
rpoC 767044 c.3675G>A synonymous_variant 0.46
rpoC 767059 c.3690T>G synonymous_variant 0.5
rpoC 767062 c.3693C>A synonymous_variant 0.49
rpoC 767098 c.3729T>C synonymous_variant 0.56
rpoC 767119 c.3750A>G synonymous_variant 0.5
rpoC 767134 c.3765C>A synonymous_variant 0.52
rpoC 767152 c.3783T>G synonymous_variant 0.46
rpoC 767158 c.3789T>A synonymous_variant 0.44
rpoC 767167 c.3798C>G synonymous_variant 0.49
rpoC 767180 p.Ala1271Gln missense_variant 0.43
rpoC 767185 c.3816G>T synonymous_variant 0.41
rpoC 767191 c.3822C>G synonymous_variant 0.42
rpoC 767200 c.3831G>A synonymous_variant 0.46
rpoC 767209 c.3840T>C synonymous_variant 0.51
rpoC 767221 c.3852C>G synonymous_variant 0.5
rpoC 767230 c.3861G>C synonymous_variant 0.48
rpoC 767233 c.3864T>C synonymous_variant 0.47
rpoC 767264 p.Ala1299Gln missense_variant 0.46
rpoC 767275 c.3906T>A synonymous_variant 0.37
rpoC 767278 c.3909T>C synonymous_variant 0.35
rpoC 767281 c.3912C>G synonymous_variant 0.34
rpoC 767284 c.3915C>T synonymous_variant 0.35
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775949 c.2532G>T synonymous_variant 0.17
mmpL5 775975 c.2506T>C synonymous_variant 0.19
mmpL5 775981 p.Leu834Met missense_variant 0.3
mmpL5 776009 c.2472A>G synonymous_variant 0.17
mmpL5 776030 c.2451G>A synonymous_variant 0.19
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781571 c.12C>T synonymous_variant 0.22
rpsL 781595 c.36T>C synonymous_variant 0.33
rpsL 781598 c.39G>C synonymous_variant 0.32
rpsL 781608 p.Ser17Ala missense_variant 0.31
rpsL 781622 c.63C>G synonymous_variant 0.37
rpsL 781628 c.69T>C synonymous_variant 0.36
rpsL 781649 c.90T>C synonymous_variant 0.41
rpsL 781655 c.96T>C synonymous_variant 0.41
rpsL 781682 c.123T>C synonymous_variant 0.34
rpsL 781703 c.144G>A synonymous_variant 0.33
rpsL 781715 c.156T>C synonymous_variant 0.31
rpsL 781718 c.159C>G synonymous_variant 0.31
rpsL 781721 c.162C>T synonymous_variant 0.33
rpsL 781728 c.169T>C synonymous_variant 0.34
rpsL 781736 c.177T>C synonymous_variant 0.37
rpsL 781751 c.192G>C synonymous_variant 0.33
rpsL 781754 c.195G>C synonymous_variant 0.33
rpsL 781760 c.201T>C synonymous_variant 0.32
rpsL 781763 c.204C>G synonymous_variant 0.33
rpsL 781766 c.207C>T synonymous_variant 0.37
rpsL 781808 c.249C>T synonymous_variant 0.43
rpsL 781820 c.261G>T synonymous_variant 0.48
rpsL 781832 c.273T>C synonymous_variant 0.49
rpsL 781868 c.309T>C synonymous_variant 0.45
rpsL 781871 c.312G>C synonymous_variant 0.47
rpsL 781886 c.327C>T synonymous_variant 0.42
rpsL 781892 c.333A>G synonymous_variant 0.4
rpsL 781898 c.339A>T synonymous_variant 0.44
rpsL 781916 c.357T>C synonymous_variant 0.33
rpsL 781929 p.Gly124Ser missense_variant 0.32
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 0.31
rplC 800612 c.-197A>G upstream_gene_variant 0.35
rplC 800618 c.-191T>C upstream_gene_variant 0.3
rplC 800627 c.-182C>T upstream_gene_variant 0.3
rplC 800648 c.-161A>C upstream_gene_variant 0.24
rplC 800654 c.-155T>C upstream_gene_variant 0.27
rplC 800693 c.-116A>C upstream_gene_variant 0.33
rplC 800714 c.-95C>T upstream_gene_variant 0.3
rplC 800715 c.-94_-92delATCinsCTT upstream_gene_variant 0.31
rplC 800723 c.-86C>G upstream_gene_variant 0.32
rplC 800744 c.-65G>A upstream_gene_variant 0.31
rplC 800747 c.-62C>G upstream_gene_variant 0.29
rplC 800759 c.-50C>T upstream_gene_variant 0.21
rplC 800762 c.-47T>G upstream_gene_variant 0.21
rplC 801123 c.315C>T synonymous_variant 0.18
rplC 801132 c.324T>C synonymous_variant 0.24
rplC 801136 p.Ser110Ala missense_variant 0.25
rplC 801141 c.333C>T synonymous_variant 0.26
rplC 801147 c.339T>C synonymous_variant 0.26
rplC 801153 c.345G>C synonymous_variant 0.26
rplC 801156 c.348T>G synonymous_variant 0.28
rplC 801171 c.363A>G synonymous_variant 0.36
rplC 801174 c.366T>C synonymous_variant 0.36
rplC 801195 c.387G>C synonymous_variant 0.38
rplC 801207 c.399C>T synonymous_variant 0.39
rplC 801210 c.402T>C synonymous_variant 0.38
rplC 801219 c.411C>G synonymous_variant 0.3
rplC 801222 c.414T>C synonymous_variant 0.28
rplC 801228 c.420T>C synonymous_variant 0.24
rplC 801246 c.438C>T synonymous_variant 0.25
rplC 801255 c.447C>T synonymous_variant 0.25
rplC 801300 c.492C>G synonymous_variant 0.2
rplC 801309 c.501C>G synonymous_variant 0.2
rplC 801312 c.504G>C synonymous_variant 0.2
rplC 801321 c.513C>T synonymous_variant 0.25
rplC 801324 c.516T>C synonymous_variant 0.24
rplC 801339 c.531T>G synonymous_variant 0.23
rplC 801341 p.Leu178Gln missense_variant 0.24
rplC 801348 c.540T>G synonymous_variant 0.21
rplC 801349 p.Leu181Val missense_variant 0.21
rplC 801357 c.549T>C synonymous_variant 0.24
rplC 801378 c.570C>T synonymous_variant 0.25
rplC 801402 c.594T>C synonymous_variant 0.2
rplC 801405 c.597T>C synonymous_variant 0.21
rplC 801408 c.600C>A synonymous_variant 0.2
fbiC 1303480 p.Gln184Glu missense_variant 0.17
fbiC 1303492 c.562T>C synonymous_variant 0.29
fbiC 1303506 c.576C>T synonymous_variant 0.37
fbiC 1303512 c.582T>C synonymous_variant 0.41
fbiC 1303537 p.Arg203Leu missense_variant 0.45
fbiC 1303542 c.612C>G synonymous_variant 0.45
fbiC 1303545 c.615A>G synonymous_variant 0.46
fbiC 1303575 c.645G>C synonymous_variant 0.37
fbiC 1303584 c.654C>G synonymous_variant 0.4
fbiC 1303590 c.660A>G synonymous_variant 0.42
fbiC 1303593 c.663G>A synonymous_variant 0.37
fbiC 1303596 c.666G>C synonymous_variant 0.36
fbiC 1303605 c.675C>G synonymous_variant 0.29
fbiC 1303608 c.678G>A synonymous_variant 0.28
fbiC 1303617 c.687C>A synonymous_variant 0.26
fbiC 1303632 c.702T>G synonymous_variant 0.29
fbiC 1303645 p.Ala239Gln missense_variant 0.24
fbiC 1303659 c.729T>G synonymous_variant 0.19
fbiC 1303661 p.Val244Ala missense_variant 0.19
fbiC 1303671 c.741C>T synonymous_variant 0.18
fbiC 1303674 c.744C>G synonymous_variant 0.18
fbiC 1303686 c.756C>G synonymous_variant 0.25
fbiC 1303695 c.765T>C synonymous_variant 0.26
fbiC 1303708 c.778T>C synonymous_variant 0.29
fbiC 1303716 c.786C>T synonymous_variant 0.33
fbiC 1303722 c.792C>G synonymous_variant 0.39
fbiC 1303731 c.801A>G synonymous_variant 0.36
fbiC 1303732 p.Ser268Ala missense_variant 0.36
fbiC 1303737 c.807G>A synonymous_variant 0.39
fbiC 1303750 c.820_822delTTAinsCTG synonymous_variant 0.4
fbiC 1303755 c.825T>C synonymous_variant 0.39
fbiC 1303779 c.849G>A synonymous_variant 0.49
fbiC 1303785 c.855G>T synonymous_variant 0.46
fbiC 1303788 c.858T>C synonymous_variant 0.46
fbiC 1303789 p.Ile287Val missense_variant 0.44
fbiC 1303794 c.864A>G synonymous_variant 0.42
fbiC 1303818 c.888C>G synonymous_variant 0.24
fbiC 1304568 c.1638T>C synonymous_variant 0.17
fbiC 1304574 c.1644C>G synonymous_variant 0.23
fbiC 1304580 c.1650T>C synonymous_variant 0.25
fbiC 1304619 c.1689G>T synonymous_variant 0.29
fbiC 1304625 c.1695C>T synonymous_variant 0.3
fbiC 1304628 c.1698G>T synonymous_variant 0.3
fbiC 1304634 c.1704C>G synonymous_variant 0.31
fbiC 1304640 c.1710A>C synonymous_variant 0.32
fbiC 1304646 c.1716T>C synonymous_variant 0.33
fbiC 1304742 c.1812T>G synonymous_variant 0.17
fbiC 1304748 c.1818T>C synonymous_variant 0.19
fbiC 1304754 c.1824G>A synonymous_variant 0.21
fbiC 1304757 c.1827A>G synonymous_variant 0.2
fbiC 1304784 c.1854T>G synonymous_variant 0.27
fbiC 1304787 c.1857T>C synonymous_variant 0.31
fbiC 1304796 c.1866G>A synonymous_variant 0.34
fbiC 1304799 c.1869G>C synonymous_variant 0.34
fbiC 1304811 c.1881C>G synonymous_variant 0.42
fbiC 1304817 c.1887T>C synonymous_variant 0.43
fbiC 1304823 c.1893C>T synonymous_variant 0.44
fbiC 1304829 c.1899T>C synonymous_variant 0.47
fbiC 1304832 c.1902C>T synonymous_variant 0.49
fbiC 1304856 c.1926C>G synonymous_variant 0.52
fbiC 1304875 p.Ile649Val missense_variant 0.58
fbiC 1304893 p.Gly655Ser missense_variant 0.56
fbiC 1304896 c.1966C>T synonymous_variant 0.58
fbiC 1304915 p.Asp662Gly missense_variant 0.53
fbiC 1304937 c.2007G>C synonymous_variant 0.44
fbiC 1304940 c.2010A>G synonymous_variant 0.39
fbiC 1304946 c.2016G>C synonymous_variant 0.4
fbiC 1304958 c.2028T>G synonymous_variant 0.34
fbiC 1304970 c.2040G>C synonymous_variant 0.37
fbiC 1304988 c.2058G>C synonymous_variant 0.26
fbiC 1304994 c.2064A>G synonymous_variant 0.23
fbiC 1304995 p.Leu689Met missense_variant 0.21
fbiC 1305114 p.Asp728Glu missense_variant 0.17
fbiC 1305117 c.2187T>C synonymous_variant 0.17
fbiC 1305144 c.2214G>A synonymous_variant 0.27
fbiC 1305150 c.2220C>G synonymous_variant 0.25
fbiC 1305154 c.2224T>C synonymous_variant 0.23
fbiC 1305173 p.Asn748Ser missense_variant 0.27
fbiC 1305177 c.2247A>C synonymous_variant 0.33
fbiC 1305181 c.2251T>C synonymous_variant 0.33
fbiC 1305186 c.2256C>T synonymous_variant 0.34
fbiC 1305201 c.2271G>C synonymous_variant 0.27
fbiC 1305204 c.2274C>T synonymous_variant 0.28
fbiC 1305207 c.2277C>G synonymous_variant 0.29
fbiC 1305215 p.Ser762Thr missense_variant 0.24
fbiC 1305231 c.2301C>G synonymous_variant 0.21
fbiC 1305237 c.2307A>G synonymous_variant 0.2
fbiC 1305240 c.2310T>C synonymous_variant 0.19
fbiC 1305243 c.2313T>G synonymous_variant 0.19
fbiC 1305244 c.2314T>C synonymous_variant 0.19
fbiC 1305252 c.2322G>A synonymous_variant 0.17
fbiC 1305393 c.2463T>C synonymous_variant 0.19
fbiC 1305399 c.2469A>G synonymous_variant 0.18
fbiC 1305411 c.2481C>G synonymous_variant 0.19
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.41
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.43
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.44
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.44
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.34
rrs 1472029 n.185_188delGGGA non_coding_transcript_exon_variant 0.21
rrs 1472040 n.195T>C non_coding_transcript_exon_variant 0.21
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.21
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.28
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.28
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.36
rrs 1472445 n.601_604delTCTC non_coding_transcript_exon_variant 0.22
rrs 1472451 n.606_607insCGGG non_coding_transcript_exon_variant 0.22
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.21
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 0.21
rrs 1472463 n.618G>C non_coding_transcript_exon_variant 0.21
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.21
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.29
rrs 1472686 n.841G>A non_coding_transcript_exon_variant 0.57
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.27
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.27
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.27
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.27
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.28
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.29
rrs 1472859 n.1014G>C non_coding_transcript_exon_variant 0.29
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.28
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.35
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.39
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.35
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.34
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 0.38
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.38
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.39
rrl 1473396 n.-262_-261insG upstream_gene_variant 0.21
rrl 1473401 n.-257G>A upstream_gene_variant 0.18
rrl 1473403 n.-255C>T upstream_gene_variant 0.18
rrl 1473408 n.-250C>T upstream_gene_variant 0.18
rrl 1473415 n.-243G>A upstream_gene_variant 0.18
rrl 1473417 n.-241C>T upstream_gene_variant 0.18
rrl 1473420 n.-238A>G upstream_gene_variant 0.19
rrl 1473421 n.-237G>A upstream_gene_variant 0.19
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.18
rrl 1473676 n.19G>A non_coding_transcript_exon_variant 0.2
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.43
rrl 1473797 n.140G>T non_coding_transcript_exon_variant 0.47
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.49
rrl 1473813 n.156C>T non_coding_transcript_exon_variant 0.53
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.52
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.59
rrl 1473887 n.230T>A non_coding_transcript_exon_variant 0.53
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 0.54
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.51
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.52
rrl 1473937 n.280C>T non_coding_transcript_exon_variant 0.58
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.57
rrl 1473987 n.330G>T non_coding_transcript_exon_variant 0.44
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.43
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.38
rrl 1474002 n.345G>A non_coding_transcript_exon_variant 0.39
rrl 1474007 n.350A>G non_coding_transcript_exon_variant 0.41
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.41
rrl 1474061 n.404T>C non_coding_transcript_exon_variant 0.42
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.55
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 0.52
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.53
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.53
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.55
rrl 1474156 n.499G>A non_coding_transcript_exon_variant 0.57
rrl 1474163 n.506C>T non_coding_transcript_exon_variant 0.55
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.57
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.45
rrl 1474286 n.629C>T non_coding_transcript_exon_variant 0.28
rrl 1474291 n.635_644delTTCCTCTCCG non_coding_transcript_exon_variant 0.26
rrl 1474303 n.646A>T non_coding_transcript_exon_variant 0.26
rrl 1474306 n.651_655delGGTGG non_coding_transcript_exon_variant 0.27
rrl 1474409 n.756_774delACCCACACGCGCATACGCG non_coding_transcript_exon_variant 0.29
rrl 1474433 n.776G>T non_coding_transcript_exon_variant 0.26
rrl 1474435 n.779_783delTGAAT non_coding_transcript_exon_variant 0.26
rrl 1474447 n.790G>A non_coding_transcript_exon_variant 0.33
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.48
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.52
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.48
rrl 1474717 n.1060A>T non_coding_transcript_exon_variant 0.58
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.53
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.45
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.38
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.39
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.18
rrl 1475018 n.1361G>A non_coding_transcript_exon_variant 0.19
rrl 1475027 n.1370G>T non_coding_transcript_exon_variant 0.24
rrl 1475028 n.1371G>T non_coding_transcript_exon_variant 0.25
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.41
rrl 1475062 n.1405A>T non_coding_transcript_exon_variant 0.41
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.19
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.17
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.28
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.25
rrl 1475379 n.1722G>A non_coding_transcript_exon_variant 0.24
rrl 1475398 n.1741C>T non_coding_transcript_exon_variant 0.25
rrl 1475401 n.1745delC non_coding_transcript_exon_variant 0.25
rrl 1475405 n.1748A>T non_coding_transcript_exon_variant 0.24
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.25
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.25
rrl 1475446 n.1789G>C non_coding_transcript_exon_variant 0.26
rrl 1475453 n.1796T>A non_coding_transcript_exon_variant 0.28
rrl 1475480 n.1823A>G non_coding_transcript_exon_variant 0.32
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.3
rrl 1475487 n.1830C>T non_coding_transcript_exon_variant 0.3
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.34
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.36
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.4
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 0.39
rrl 1475605 n.1948A>T non_coding_transcript_exon_variant 0.38
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.39
rrl 1475617 n.1960C>G non_coding_transcript_exon_variant 0.42
rrl 1475625 n.1968G>C non_coding_transcript_exon_variant 0.38
rrl 1475637 n.1980T>A non_coding_transcript_exon_variant 0.4
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.43
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.38
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.36
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.4
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.56
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.4
rrl 1475999 n.2342G>T non_coding_transcript_exon_variant 0.36
rrl 1476032 n.2375C>T non_coding_transcript_exon_variant 0.32
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.32
rrl 1476034 n.2377C>T non_coding_transcript_exon_variant 0.32
rrl 1476035 n.2378G>A non_coding_transcript_exon_variant 0.33
rrl 1476045 n.2388G>A non_coding_transcript_exon_variant 0.33
rrl 1476047 n.2390G>A non_coding_transcript_exon_variant 0.33
rrl 1476077 n.2420T>C non_coding_transcript_exon_variant 0.48
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.46
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.43
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.5
rrl 1476104 n.2448delG non_coding_transcript_exon_variant 0.53
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.52
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.51
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.5
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.5
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 0.4
rrl 1476256 n.2599A>C non_coding_transcript_exon_variant 0.41
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.35
rrl 1476301 n.2644A>G non_coding_transcript_exon_variant 0.3
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 0.39
rrl 1476595 n.2938C>T non_coding_transcript_exon_variant 0.41
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.42
rrl 1476602 n.2945G>A non_coding_transcript_exon_variant 0.41
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.47
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.45
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.33
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.34
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.33
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.35
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.29
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.24
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 0.23
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.23
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.23
rrl 1476740 n.3083G>A non_coding_transcript_exon_variant 0.24
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.18
rrl 1476755 n.3098G>A non_coding_transcript_exon_variant 0.15
inhA 1673487 c.-715T>G upstream_gene_variant 0.19
inhA 1673490 c.-712A>G upstream_gene_variant 0.21
inhA 1673494 c.-708C>T upstream_gene_variant 0.21
inhA 1673499 c.-703T>G upstream_gene_variant 0.21
inhA 1673505 c.-697A>C upstream_gene_variant 0.22
inhA 1673523 c.-679G>T upstream_gene_variant 0.26
inhA 1673535 c.-667A>C upstream_gene_variant 0.27
inhA 1673547 c.-655T>C upstream_gene_variant 0.26
fabG1 1673710 p.Leu91Ile missense_variant 0.17
fabG1 1673716 p.Ala93Lys missense_variant 0.17
inhA 1673721 c.-481C>T upstream_gene_variant 0.21
inhA 1673727 c.-475C>T upstream_gene_variant 0.22
fabG1 1673733 p.Met98Ile missense_variant 0.23
inhA 1673748 c.-454A>G upstream_gene_variant 0.23
fabG1 1673749 p.Lys104Arg missense_variant 0.23
fabG1 1673758 p.Lys107Glu missense_variant 0.22
inhA 1673802 c.-400A>G upstream_gene_variant 0.17
inhA 1673805 c.-397G>C upstream_gene_variant 0.19
inhA 1673808 c.-394A>C upstream_gene_variant 0.2
inhA 1674507 c.306G>A synonymous_variant 0.17
inhA 1674534 c.333G>A synonymous_variant 0.18
inhA 1674542 p.Ala114Glu missense_variant 0.17
inhA 1674546 c.345T>C synonymous_variant 0.17
inhA 1674810 c.609C>G synonymous_variant 0.19
inhA 1674813 c.612C>T synonymous_variant 0.18
inhA 1674816 c.615T>C synonymous_variant 0.19
inhA 1674819 c.618G>T synonymous_variant 0.2
inhA 1674840 c.639C>T synonymous_variant 0.25
inhA 1674846 p.Ile215Met missense_variant 0.26
inhA 1674870 c.669T>C synonymous_variant 0.27
inhA 1674900 c.699G>A synonymous_variant 0.21
inhA 1674903 c.702T>C synonymous_variant 0.19
inhA 1674904 p.Ala235Pro missense_variant 0.23
inhA 1674927 c.726G>A synonymous_variant 0.27
inhA 1674939 c.738G>T synonymous_variant 0.26
inhA 1674942 c.741T>G synonymous_variant 0.26
inhA 1674954 c.753G>C synonymous_variant 0.22
inhA 1674963 c.762G>C synonymous_variant 0.22
inhA 1674966 c.765T>C synonymous_variant 0.21
inhA 1674967 p.Asp256Thr missense_variant 0.21
inhA 1674975 c.774C>T synonymous_variant 0.19
inhA 1674993 c.792G>C synonymous_variant 0.18
rpsA 1833532 c.-10A>C upstream_gene_variant 0.17
rpsA 1833554 p.Thr5Ala missense_variant 0.27
rpsA 1833589 c.48A>T synonymous_variant 0.34
rpsA 1833595 c.54T>G synonymous_variant 0.35
rpsA 1833667 c.126C>G synonymous_variant 0.37
rpsA 1833703 c.162C>T synonymous_variant 0.42
rpsA 1833724 c.183C>G synonymous_variant 0.38
rpsA 1833727 c.186G>C synonymous_variant 0.36
rpsA 1833745 c.204G>C synonymous_variant 0.44
rpsA 1833749 p.Ile70Leu missense_variant 0.57
rpsA 1833760 c.219C>T synonymous_variant 0.47
rpsA 1833782 p.Ser81Thr missense_variant 0.45
rpsA 1833787 c.246C>G synonymous_variant 0.43
rpsA 1833793 c.252C>T synonymous_variant 0.43
rpsA 1833799 c.258C>A synonymous_variant 0.4
rpsA 1833802 c.261A>G synonymous_variant 0.4
rpsA 1833808 c.267G>T synonymous_variant 0.39
rpsA 1833811 c.270G>T synonymous_variant 0.39
rpsA 1833820 c.279G>A synonymous_variant 0.4
rpsA 1833832 c.291G>A synonymous_variant 0.38
rpsA 1833838 c.297G>T synonymous_variant 0.38
rpsA 1833841 c.300C>G synonymous_variant 0.37
rpsA 1833847 c.306C>G synonymous_variant 0.35
rpsA 1833856 c.315A>G synonymous_variant 0.32
rpsA 1833874 c.333T>C synonymous_variant 0.29
rpsA 1833892 c.351G>A synonymous_variant 0.36
rpsA 1833904 c.363G>A synonymous_variant 0.38
rpsA 1833928 c.387G>C synonymous_variant 0.34
rpsA 1833934 c.393C>T synonymous_variant 0.34
rpsA 1833949 c.408T>C synonymous_variant 0.4
rpsA 1833970 c.429G>C synonymous_variant 0.47
rpsA 1833979 c.438T>C synonymous_variant 0.49
rpsA 1834000 c.459G>C synonymous_variant 0.45
rpsA 1834021 c.480C>T synonymous_variant 0.41
rpsA 1834030 c.489C>G synonymous_variant 0.41
rpsA 1834051 c.510G>A synonymous_variant 0.45
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.27
rpsA 1834102 c.561T>C synonymous_variant 0.25
rpsA 1834105 c.564C>T synonymous_variant 0.27
rpsA 1834150 c.609G>C synonymous_variant 0.27
rpsA 1834153 c.612T>C synonymous_variant 0.28
rpsA 1834154 p.Asn205Gln missense_variant 0.29
rpsA 1834157 c.616T>C synonymous_variant 0.28
rpsA 1834162 c.621A>G synonymous_variant 0.29
rpsA 1834165 c.624A>G synonymous_variant 0.31
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834186 c.645C>G synonymous_variant 0.29
rpsA 1834189 c.648G>C synonymous_variant 0.32
rpsA 1834192 c.651C>G synonymous_variant 0.32
rpsA 1834234 c.693G>C synonymous_variant 0.33
rpsA 1834249 c.708T>C synonymous_variant 0.33
rpsA 1834252 c.711C>T synonymous_variant 0.33
rpsA 1834255 c.714C>G synonymous_variant 0.33
rpsA 1834258 c.717G>A synonymous_variant 0.32
rpsA 1834259 c.718_720delCTAinsTTG synonymous_variant 0.33
rpsA 1834279 c.738C>T synonymous_variant 0.33
rpsA 1834282 c.741C>T synonymous_variant 0.32
rpsA 1834294 c.753G>C synonymous_variant 0.26
rpsA 1834306 c.765T>C synonymous_variant 0.33
rpsA 1834348 c.807T>C synonymous_variant 0.43
rpsA 1834366 c.825A>G synonymous_variant 0.4
rpsA 1834387 c.846C>T synonymous_variant 0.33
rpsA 1834396 c.855G>C synonymous_variant 0.36
rpsA 1834411 c.870T>C synonymous_variant 0.35
rpsA 1834414 c.873C>T synonymous_variant 0.35
rpsA 1834417 c.876G>C synonymous_variant 0.34
rpsA 1834432 c.891G>C synonymous_variant 0.4
rpsA 1834435 c.894G>C synonymous_variant 0.4
rpsA 1834444 c.903C>G synonymous_variant 0.38
rpsA 1834451 c.910T>C synonymous_variant 0.38
rpsA 1834456 c.915T>G synonymous_variant 0.38
rpsA 1834465 c.924T>C synonymous_variant 0.38
rpsA 1834468 c.927A>G synonymous_variant 0.42
rpsA 1834474 c.933C>G synonymous_variant 0.46
rpsA 1834477 c.936C>T synonymous_variant 0.5
rpsA 1834489 c.948T>C synonymous_variant 0.53
rpsA 1834495 c.954G>A synonymous_variant 0.42
rpsA 1834498 c.957C>T synonymous_variant 0.42
rpsA 1834513 c.972C>G synonymous_variant 0.5
rpsA 1834517 c.976C>T synonymous_variant 0.5
rpsA 1834528 c.987T>C synonymous_variant 0.48
rpsA 1834546 c.1005T>C synonymous_variant 0.49
rpsA 1834555 c.1014T>C synonymous_variant 0.53
rpsA 1834556 p.Ala339Thr missense_variant 0.53
rpsA 1834609 c.1068T>C synonymous_variant 0.64
rpsA 1834612 c.1071G>A synonymous_variant 0.64
rpsA 1834615 c.1074C>T synonymous_variant 0.62
rpsA 1834624 c.1083G>A synonymous_variant 0.64
rpsA 1834633 c.1092A>G synonymous_variant 0.63
rpsA 1834639 c.1098T>C synonymous_variant 0.62
rpsA 1834654 p.Glu371Asp missense_variant 0.56
rpsA 1834666 c.1125G>C synonymous_variant 0.45
rpsA 1834669 c.1128G>C synonymous_variant 0.45
rpsA 1834690 c.1149T>C synonymous_variant 0.26
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2101873 c.1170T>C synonymous_variant 0.19
ndh 2101876 c.1167C>T synonymous_variant 0.19
ndh 2101888 p.Val385Leu missense_variant 0.19
ndh 2101891 p.Pro384Arg missense_variant 0.19
ndh 2101894 c.1149T>G synonymous_variant 0.18
ndh 2101899 p.Ile382Val missense_variant 0.25
ndh 2101912 c.1131G>A synonymous_variant 0.28
ndh 2101924 c.1119T>G synonymous_variant 0.3
ndh 2101939 c.1104A>C synonymous_variant 0.39
ndh 2101960 c.1083A>G synonymous_variant 0.39
ndh 2101964 p.Glu360Ala missense_variant 0.38
ndh 2101966 c.1077T>A synonymous_variant 0.38
ndh 2101972 c.1071G>C synonymous_variant 0.43
ndh 2101980 p.Asn355Asp missense_variant 0.43
ndh 2101987 c.1056C>G synonymous_variant 0.44
ndh 2101990 c.1053G>C synonymous_variant 0.44
ndh 2101999 c.1044G>A synonymous_variant 0.41
ndh 2102020 c.1023A>G synonymous_variant 0.39
ndh 2102023 c.1020G>C synonymous_variant 0.39
ndh 2102026 c.1017G>T synonymous_variant 0.38
ndh 2102035 c.1008C>G synonymous_variant 0.38
ndh 2102047 c.996G>C synonymous_variant 0.3
ndh 2102050 c.993T>A synonymous_variant 0.3
ndh 2102059 c.984T>A synonymous_variant 0.29
ndh 2102065 c.978G>C synonymous_variant 0.26
ndh 2102068 c.975T>G synonymous_variant 0.25
ndh 2102077 c.966T>C synonymous_variant 0.16
ndh 2102653 p.His130Gln missense_variant 0.22
ndh 2102668 c.375T>C synonymous_variant 0.22
ndh 2102671 c.372T>C synonymous_variant 0.22
ndh 2102680 c.363T>C synonymous_variant 0.22
ndh 2102683 c.360T>C synonymous_variant 0.22
ndh 2102686 c.357G>C synonymous_variant 0.24
ndh 2102707 c.336C>T synonymous_variant 0.27
ndh 2102710 c.333C>T synonymous_variant 0.27
ndh 2102713 c.330C>T synonymous_variant 0.27
ndh 2102718 p.Gln109Glu missense_variant 0.27
ndh 2102722 c.321C>G synonymous_variant 0.27
ndh 2102731 c.312C>G synonymous_variant 0.27
ndh 2102737 p.Glu102Asp missense_variant 0.23
ndh 2102750 p.Cys98Phe missense_variant 0.21
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.37
kasA 2517950 c.-165C>G upstream_gene_variant 0.32
kasA 2517962 c.-153C>G upstream_gene_variant 0.29
kasA 2517989 c.-126T>C upstream_gene_variant 0.21
kasA 2517993 c.-122G>T upstream_gene_variant 0.18
kasA 2518010 c.-105C>G upstream_gene_variant 0.17
kasA 2518013 c.-102G>A upstream_gene_variant 0.16
kasA 2518519 c.405G>C synonymous_variant 0.2
kasA 2518528 c.414C>G synonymous_variant 0.18
kasA 2518534 c.420G>C synonymous_variant 0.19
kasA 2518561 c.447T>C synonymous_variant 0.21
kasA 2518567 c.453G>T synonymous_variant 0.18
kasA 2518651 c.537C>G synonymous_variant 0.19
kasA 2518657 c.543G>C synonymous_variant 0.23
kasA 2518663 c.549T>C synonymous_variant 0.23
kasA 2518672 c.558G>C synonymous_variant 0.22
kasA 2518678 c.564C>T synonymous_variant 0.26
kasA 2518684 c.570C>G synonymous_variant 0.28
kasA 2518687 p.Asp191Glu missense_variant 0.28
kasA 2518711 c.597A>G synonymous_variant 0.35
kasA 2518717 c.603C>G synonymous_variant 0.33
kasA 2518747 c.633C>G synonymous_variant 0.31
kasA 2518768 c.654C>G synonymous_variant 0.3
kasA 2518783 c.669T>C synonymous_variant 0.31
kasA 2518789 c.675G>C synonymous_variant 0.3
kasA 2518792 c.678C>G synonymous_variant 0.28
kasA 2518795 c.681C>G synonymous_variant 0.28
kasA 2518825 c.711T>C synonymous_variant 0.3
kasA 2518843 c.729T>C synonymous_variant 0.33
kasA 2518846 c.732G>C synonymous_variant 0.32
kasA 2518864 c.750G>C synonymous_variant 0.28
kasA 2518867 c.753G>A synonymous_variant 0.28
kasA 2518879 c.765A>G synonymous_variant 0.31
kasA 2518885 c.771T>C synonymous_variant 0.29
kasA 2518898 c.784T>C synonymous_variant 0.32
kasA 2518906 c.792A>G synonymous_variant 0.24
kasA 2518907 c.793T>C synonymous_variant 0.25
kasA 2518910 p.Leu266Met missense_variant 0.22
kasA 2519104 c.990T>A synonymous_variant 0.18
kasA 2519119 c.1005G>C synonymous_variant 0.18
kasA 2519137 c.1023T>G synonymous_variant 0.21
kasA 2519146 c.1032C>G synonymous_variant 0.27
kasA 2519152 c.1038G>T synonymous_variant 0.27
kasA 2519161 c.1047G>A synonymous_variant 0.31
kasA 2519167 c.1053T>G synonymous_variant 0.31
kasA 2519188 c.1074G>A synonymous_variant 0.38
kasA 2519197 c.1083G>C synonymous_variant 0.31
kasA 2519203 c.1089C>G synonymous_variant 0.3
kasA 2519206 c.1092C>T synonymous_variant 0.31
kasA 2519221 c.1107G>C synonymous_variant 0.24
kasA 2519227 c.1113G>C synonymous_variant 0.22
kasA 2519236 c.1122G>A synonymous_variant 0.2
kasA 2519239 c.1125A>C synonymous_variant 0.17
eis 2714526 c.805_806delAC frameshift_variant 1.0
folC 2746366 c.1233G>A synonymous_variant 0.21
folC 2746584 c.1015T>C synonymous_variant 0.22
folC 2746591 c.1008C>G synonymous_variant 0.2
folC 2746597 c.1002C>G synonymous_variant 0.2
folC 2746609 c.990T>C synonymous_variant 0.27
folC 2746612 c.987C>T synonymous_variant 0.31
folC 2746621 c.978C>G synonymous_variant 0.3
folC 2746624 c.975C>G synonymous_variant 0.31
folC 2746627 p.Asp324Glu missense_variant 0.31
folC 2746631 p.Gly323Val missense_variant 0.3
folC 2746657 c.942T>C synonymous_variant 0.34
folC 2746663 c.936T>C synonymous_variant 0.32
folC 2746675 p.Ser308Ala missense_variant 0.24
folC 2746678 c.921T>G synonymous_variant 0.24
folC 2746681 c.918C>G synonymous_variant 0.26
folC 2746684 c.915C>T synonymous_variant 0.25
folC 2746687 p.Leu304Val missense_variant 0.24
folC 2746711 c.888A>G synonymous_variant 0.29
folC 2746714 c.885T>C synonymous_variant 0.24
folC 2746728 c.871T>C synonymous_variant 0.21
folC 2746732 p.Ile289Met missense_variant 0.2
folC 2746957 c.642G>C synonymous_variant 0.17
folC 2746975 c.624T>C synonymous_variant 0.2
folC 2746978 p.Ala207Glu missense_variant 0.2
folC 2746990 p.Asp203Glu missense_variant 0.24
folC 2746999 c.600T>C synonymous_variant 0.19
folC 2747002 c.597T>C synonymous_variant 0.19
folC 2747007 p.Ser198Gly missense_variant 0.19
folC 2747010 p.Ile197Val missense_variant 0.18
folC 2747023 c.576C>G synonymous_variant 0.2
folC 2747029 c.570G>C synonymous_variant 0.19
folC 2747032 c.567A>G synonymous_variant 0.19
folC 2747274 p.Ser109Ala missense_variant 0.19
folC 2747275 c.324T>C synonymous_variant 0.19
folC 2747281 c.318A>G synonymous_variant 0.18
folC 2747299 c.300C>T synonymous_variant 0.23
folC 2747302 c.297A>G synonymous_variant 0.23
folC 2747314 c.285A>T synonymous_variant 0.21
folC 2747317 c.282C>G synonymous_variant 0.19
pepQ 2859825 p.Ala198Ser missense_variant 0.22
pepQ 2859828 c.591G>A synonymous_variant 0.23
pepQ 2859834 c.585T>C synonymous_variant 0.23
Rv2752c 3064985 c.1207C>T synonymous_variant 0.19
Rv2752c 3064989 c.1203G>C synonymous_variant 0.18
Rv2752c 3064998 c.1194A>C synonymous_variant 0.2
Rv2752c 3065016 c.1176C>T synonymous_variant 0.25
Rv2752c 3065022 c.1170G>C synonymous_variant 0.27
Rv2752c 3065046 c.1146G>C synonymous_variant 0.29
Rv2752c 3065052 c.1140G>A synonymous_variant 0.26
Rv2752c 3065055 c.1137T>C synonymous_variant 0.27
Rv2752c 3065064 c.1128G>C synonymous_variant 0.24
Rv2752c 3065067 c.1125C>T synonymous_variant 0.2
Rv2752c 3065073 c.1119C>G synonymous_variant 0.22
Rv2752c 3065097 c.1095C>T synonymous_variant 0.16
Rv2752c 3065106 c.1086C>G synonymous_variant 0.17
Rv2752c 3065430 c.762A>T synonymous_variant 0.19
Rv2752c 3065463 c.729T>C synonymous_variant 0.16
Rv2752c 3065475 c.717C>T synonymous_variant 0.17
Rv2752c 3065553 c.639A>G synonymous_variant 0.2
Rv2752c 3065562 c.630T>C synonymous_variant 0.23
Rv2752c 3065576 p.Ala206Ser missense_variant 0.24
Rv2752c 3065577 c.615C>T synonymous_variant 0.24
Rv2752c 3065580 c.612G>C synonymous_variant 0.24
Rv2752c 3065589 c.603C>T synonymous_variant 0.23
Rv2752c 3065595 p.Leu199Phe missense_variant 0.23
Rv2752c 3065601 c.591C>T synonymous_variant 0.24
Rv2752c 3065607 c.585C>T synonymous_variant 0.25
Rv2752c 3065612 p.Thr194Ala missense_variant 0.28
Rv2752c 3065614 p.Asp193Gly missense_variant 0.31
Rv2752c 3065634 c.558G>C synonymous_variant 0.24
Rv2752c 3065637 c.555A>C synonymous_variant 0.22
Rv2752c 3065640 c.552T>C synonymous_variant 0.19
Rv2752c 3065675 p.Phe173Leu missense_variant 0.17
Rv2752c 3065682 c.510C>T synonymous_variant 0.17
Rv2752c 3065711 p.Gly161Ser missense_variant 0.89
Rv2752c 3065916 c.276T>C synonymous_variant 0.17
Rv2752c 3065919 c.273G>A synonymous_variant 0.17
Rv2752c 3065922 c.270T>C synonymous_variant 0.21
Rv2752c 3065928 c.264G>C synonymous_variant 0.3
Rv2752c 3065947 p.Gly82Ala missense_variant 0.31
Rv2752c 3065949 c.243C>T synonymous_variant 0.31
Rv2752c 3065957 c.235T>C synonymous_variant 0.33
Rv2752c 3065958 c.234G>C synonymous_variant 0.33
Rv2752c 3065979 c.213T>C synonymous_variant 0.34
Rv2752c 3065993 p.Val67Ile missense_variant 0.29
Rv2752c 3065994 c.198T>C synonymous_variant 0.29
Rv2752c 3066002 p.Met64Leu missense_variant 0.27
Rv2752c 3066006 c.186G>C synonymous_variant 0.25
Rv2752c 3066018 c.174T>C synonymous_variant 0.26
Rv2752c 3066024 c.168T>C synonymous_variant 0.23
Rv2752c 3066040 p.Gly51Thr missense_variant 0.21
Rv2752c 3066050 p.Leu48Met missense_variant 0.21
Rv2752c 3066054 c.138T>G synonymous_variant 0.23
Rv2752c 3066066 c.126T>C synonymous_variant 0.21
Rv2752c 3066071 c.121T>C synonymous_variant 0.2
Rv2752c 3066075 c.117A>G synonymous_variant 0.22
Rv2752c 3066084 c.108C>T synonymous_variant 0.22
Rv2752c 3066087 c.105A>G synonymous_variant 0.21
Rv2752c 3066118 p.Asn25Gly missense_variant 0.26
Rv2752c 3066126 c.66C>G synonymous_variant 0.26
Rv2752c 3066129 c.63G>C synonymous_variant 0.24
Rv2752c 3066135 c.57C>T synonymous_variant 0.2
Rv2752c 3066138 c.54C>G synonymous_variant 0.21
Rv2752c 3066150 c.42C>T synonymous_variant 0.18
Rv2752c 3066153 p.Ser13Thr missense_variant 0.17
Rv2752c 3066161 c.31C>T synonymous_variant 0.19
Rv2752c 3066162 c.30C>G synonymous_variant 0.19
Rv2752c 3066360 c.-169T>C upstream_gene_variant 0.15
Rv2752c 3066378 c.-187C>T upstream_gene_variant 0.19
Rv2752c 3066390 c.-199C>G upstream_gene_variant 0.21
thyX 3067295 c.651C>A synonymous_variant 0.17
thyX 3067316 c.630A>G synonymous_variant 0.28
thyX 3067325 c.621A>G synonymous_variant 0.26
thyX 3067349 c.597G>C synonymous_variant 0.31
thyX 3067355 c.591A>G synonymous_variant 0.3
thyX 3067360 p.Ile196Val missense_variant 0.33
thyX 3067367 c.579G>C synonymous_variant 0.35
thyX 3067373 c.573C>G synonymous_variant 0.39
thyX 3067382 c.564C>T synonymous_variant 0.41
thyX 3067385 c.561C>G synonymous_variant 0.44
thyX 3067394 c.552G>C synonymous_variant 0.41
thyX 3067418 c.528C>G synonymous_variant 0.3
thyX 3067436 c.510C>G synonymous_variant 0.19
thyX 3067565 p.Asp127Glu missense_variant 0.19
thyX 3067570 p.Ala126Pro missense_variant 0.2
thyX 3067583 c.363C>T synonymous_variant 0.25
thyX 3067586 c.360C>G synonymous_variant 0.23
thyX 3067600 p.Val116Ile missense_variant 0.23
thyX 3067602 p.Arg115Gln missense_variant 0.22
thyX 3067607 p.Asp113Glu missense_variant 0.23
thyX 3067611 p.Lys112Thr missense_variant 0.23
thyX 3067616 c.330C>G synonymous_variant 0.23
thyX 3067619 c.327A>C synonymous_variant 0.29
thyX 3067631 c.315C>G synonymous_variant 0.27
thyX 3067634 c.312C>T synonymous_variant 0.26
thyX 3067643 c.303C>T synonymous_variant 0.25
thyX 3067655 c.291G>C synonymous_variant 0.24
thyX 3067661 c.285C>G synonymous_variant 0.28
thyX 3067670 c.276G>A synonymous_variant 0.25
thyX 3067676 c.270C>G synonymous_variant 0.27
thyX 3067685 c.261A>G synonymous_variant 0.26
thyX 3067694 c.252G>C synonymous_variant 0.32
thyX 3067715 p.Ser77Thr missense_variant 0.26
thyX 3067718 c.228C>G synonymous_variant 0.26
thyX 3067721 c.225T>C synonymous_variant 0.26
thyX 3067727 c.219A>C synonymous_variant 0.26
thyX 3067736 c.210C>T synonymous_variant 0.24
thyX 3067742 c.204A>C synonymous_variant 0.24
thyX 3067754 c.192C>T synonymous_variant 0.18
thyX 3067788 p.Lys53Arg missense_variant 0.18
thyX 3067799 c.147G>A synonymous_variant 0.3
thyX 3067802 c.144C>G synonymous_variant 0.33
thyX 3067814 c.132T>C synonymous_variant 0.35
thyX 3067823 c.123G>C synonymous_variant 0.34
thyX 3067826 c.120C>G synonymous_variant 0.36
thyX 3067850 c.96A>G synonymous_variant 0.42
thyX 3067874 c.72C>G synonymous_variant 0.36
thyX 3067883 c.63C>G synonymous_variant 0.3
thyX 3067886 c.60A>G synonymous_variant 0.27
thyX 3067889 c.57C>G synonymous_variant 0.28
thyX 3067898 p.Asp16Glu missense_variant 0.22
thyA 3073887 p.Ser195Gly missense_variant 0.18
thyA 3073905 c.567C>G synonymous_variant 0.23
thyA 3073920 c.552C>G synonymous_variant 0.24
thyA 3073925 c.547T>C synonymous_variant 0.29
thyA 3073932 c.540C>T synonymous_variant 0.31
thyA 3073959 c.513T>C synonymous_variant 0.26
thyA 3073968 c.504C>G synonymous_variant 0.31
thyA 3073977 c.495A>G synonymous_variant 0.4
thyA 3073983 c.489C>T synonymous_variant 0.39
thyA 3073989 c.483T>C synonymous_variant 0.38
thyA 3074001 c.471C>G synonymous_variant 0.41
thyA 3074010 c.462C>G synonymous_variant 0.42
thyA 3074031 c.441T>C synonymous_variant 0.37
thyA 3074037 c.435C>G synonymous_variant 0.4
thyA 3074046 c.426G>C synonymous_variant 0.38
thyA 3074053 p.Arg140Gln missense_variant 0.35
thyA 3074056 p.Glu139Pro missense_variant 0.33
thyA 3074082 c.390G>C synonymous_variant 0.2
thyA 3074089 p.Ile128Asn missense_variant 0.19
thyA 3074121 p.Asp117Glu missense_variant 0.19
thyA 3074130 c.342G>C synonymous_variant 0.21
thyA 3074133 c.339C>T synonymous_variant 0.22
thyA 3074157 c.315C>G synonymous_variant 0.32
thyA 3074160 c.312A>G synonymous_variant 0.31
thyA 3074163 p.Ala103Thr missense_variant 0.31
thyA 3074172 c.300G>C synonymous_variant 0.35
thyA 3074181 c.291A>G synonymous_variant 0.38
thyA 3074184 c.288A>G synonymous_variant 0.4
thyA 3074187 c.285T>C synonymous_variant 0.4
thyA 3074196 c.276G>C synonymous_variant 0.38
thyA 3074199 c.273G>A synonymous_variant 0.39
thyA 3074205 p.Glu89Asp missense_variant 0.4
thyA 3074214 c.258T>C synonymous_variant 0.38
thyA 3074217 c.255T>C synonymous_variant 0.38
thyA 3074220 c.252A>C synonymous_variant 0.39
thyA 3074244 c.228A>C synonymous_variant 0.31
thyA 3074252 p.Glu74Gln missense_variant 0.26
thyA 3074253 p.His73Gln missense_variant 0.26
thyA 3074256 c.216G>A synonymous_variant 0.26
thyA 3074267 p.Ile69Val missense_variant 0.19
thyA 3074268 c.204T>C synonymous_variant 0.19
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087696 p.Thr293Ala missense_variant 0.17
ald 3087716 c.897G>C synonymous_variant 0.17
fbiD 3339333 c.216G>A synonymous_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474174 c.168T>C synonymous_variant 0.17
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
fbiB 3642662 c.1128C>G synonymous_variant 0.18
fbiB 3642704 c.1170G>T synonymous_variant 0.17
fbiB 3642707 c.1173C>G synonymous_variant 0.18
fbiB 3642711 p.Leu393Val missense_variant 0.19
fbiB 3642719 c.1185T>C synonymous_variant 0.21
fbiB 3642731 c.1197C>G synonymous_variant 0.16
alr 3840410 p.Gly337Ser missense_variant 0.18
alr 3840418 p.Cys335Arg missense_variant 0.21
alr 3840422 c.999A>G synonymous_variant 0.21
alr 3840440 p.Glu327Asp missense_variant 0.21
alr 3840443 c.978G>C synonymous_variant 0.21
alr 3840449 c.972G>C synonymous_variant 0.19
alr 3840460 p.Ser321Ala missense_variant 0.16
alr 3840470 c.951C>T synonymous_variant 0.15
rpoA 3877527 c.981C>G synonymous_variant 0.19
rpoA 3877542 c.966C>T synonymous_variant 0.28
rpoA 3877557 c.951C>G synonymous_variant 0.37
rpoA 3877587 c.921A>G synonymous_variant 0.52
rpoA 3877613 p.Ile299Val missense_variant 0.52
rpoA 3877617 c.891G>C synonymous_variant 0.51
rpoA 3877638 c.870T>C synonymous_variant 0.41
rpoA 3877656 c.852T>G synonymous_variant 0.42
rpoA 3877668 c.840A>G synonymous_variant 0.35
rpoA 3877677 p.Ala277Ser missense_variant 0.26
rpoA 3877680 c.828G>C synonymous_variant 0.27
rpoA 3877686 c.822A>G synonymous_variant 0.32
rpoA 3877692 c.816G>C synonymous_variant 0.32
rpoA 3877704 c.804G>T synonymous_variant 0.42
rpoA 3877737 c.771G>C synonymous_variant 0.43
rpoA 3877764 c.744C>G synonymous_variant 0.38
rpoA 3877770 c.738A>G synonymous_variant 0.41
rpoA 3877773 c.735G>C synonymous_variant 0.42
rpoA 3877776 c.732T>C synonymous_variant 0.43
rpoA 3877782 c.726T>C synonymous_variant 0.47
rpoA 3877818 c.690A>G synonymous_variant 0.39
rpoA 3877839 c.669G>C synonymous_variant 0.42
rpoA 3877857 c.651G>A synonymous_variant 0.43
rpoA 3877866 c.642G>C synonymous_variant 0.4
rpoA 3877872 c.636C>T synonymous_variant 0.36
rpoA 3877875 c.633T>G synonymous_variant 0.37
rpoA 3877887 c.621G>C synonymous_variant 0.36
rpoA 3877896 c.612G>C synonymous_variant 0.37
rpoA 3877900 p.Ser203Thr missense_variant 0.37
rpoA 3877905 c.603A>G synonymous_variant 0.4
rpoA 3877909 p.Asn200Ser missense_variant 0.43
rpoA 3877920 c.588G>C synonymous_variant 0.41
rpoA 3877986 c.522G>C synonymous_variant 0.4
rpoA 3877989 c.519A>G synonymous_variant 0.39
rpoA 3877995 c.513G>A synonymous_variant 0.4
rpoA 3878001 c.507A>G synonymous_variant 0.4
rpoA 3878022 c.486T>C synonymous_variant 0.37
rpoA 3878025 c.483C>T synonymous_variant 0.37
rpoA 3878028 c.480G>C synonymous_variant 0.37
rpoA 3878031 c.477T>C synonymous_variant 0.37
rpoA 3878043 c.465G>C synonymous_variant 0.45
rpoA 3878049 c.459G>C synonymous_variant 0.45
rpoA 3878055 c.453A>G synonymous_variant 0.48
rpoA 3878061 c.447G>C synonymous_variant 0.45
rpoA 3878067 c.441C>G synonymous_variant 0.44
rpoA 3878073 c.435C>T synonymous_variant 0.4
rpoA 3878076 c.432C>T synonymous_variant 0.38
rpoA 3878079 c.429C>T synonymous_variant 0.42
rpoA 3878082 c.426T>C synonymous_variant 0.45
rpoA 3878106 c.402G>C synonymous_variant 0.5
rpoA 3878118 c.390T>C synonymous_variant 0.52
rpoA 3878130 c.378C>G synonymous_variant 0.58
rpoA 3878157 c.351C>G synonymous_variant 0.42
rpoA 3878163 c.345C>T synonymous_variant 0.38
rpoA 3878169 c.339G>C synonymous_variant 0.38
rpoA 3878184 c.324C>T synonymous_variant 0.24
rpoA 3878187 c.321C>G synonymous_variant 0.26
rpoA 3878193 c.315T>C synonymous_variant 0.26
rpoA 3878199 c.309T>C synonymous_variant 0.22
rpoA 3878205 c.303T>C synonymous_variant 0.28
rpoA 3878217 c.291A>G synonymous_variant 0.24
rpoA 3878247 c.261G>C synonymous_variant 0.2
rpoA 3878256 c.252G>C synonymous_variant 0.29
rpoA 3878262 p.Ser82Gly missense_variant 0.27
rpoA 3878271 c.237T>C synonymous_variant 0.27
rpoA 3878276 c.232C>T synonymous_variant 0.27
rpoA 3878283 p.Glu75Asp missense_variant 0.3
rpoA 3878295 c.213A>G synonymous_variant 0.27
rpoA 3878298 c.210A>G synonymous_variant 0.26
rpoA 3878304 c.204G>C synonymous_variant 0.29
rpoA 3878313 c.195G>C synonymous_variant 0.31
rpoA 3878331 c.177A>G synonymous_variant 0.24
rpoA 3878334 c.174T>C synonymous_variant 0.25
rpoA 3878337 c.171T>C synonymous_variant 0.24
rpoA 3878355 c.153C>G synonymous_variant 0.31
rpoA 3878364 c.144A>C synonymous_variant 0.35
rpoA 3878391 c.117T>G synonymous_variant 0.42
rpoA 3878406 c.102G>T synonymous_variant 0.55
rpoA 3878415 c.93C>T synonymous_variant 0.56
rpoA 3878421 c.87A>T synonymous_variant 0.52
rpoA 3878442 c.66G>C synonymous_variant 0.54
rpoA 3878454 c.54A>G synonymous_variant 0.47
rpoA 3878458 p.Asn17Ser missense_variant 0.52
rpoA 3878471 p.Val13Ile missense_variant 0.43
rpoA 3878472 p.Asp12Glu missense_variant 0.39
rpoA 3878484 c.24C>A synonymous_variant 0.35
rpoA 3878490 c.18C>A synonymous_variant 0.32
rpoA 3878496 c.12A>T synonymous_variant 0.17
clpC1 4038271 p.Pro812Thr missense_variant 0.18
clpC1 4038278 c.2427T>C synonymous_variant 0.23
clpC1 4038289 p.Asn806Asp missense_variant 0.31
clpC1 4038314 c.2391T>C synonymous_variant 0.29
clpC1 4038317 c.2388G>C synonymous_variant 0.28
clpC1 4038320 c.2385G>C synonymous_variant 0.29
clpC1 4038323 c.2382C>G synonymous_variant 0.3
clpC1 4038329 p.Glu792Asp missense_variant 0.37
clpC1 4038350 c.2355C>G synonymous_variant 0.41
clpC1 4038356 c.2349T>C synonymous_variant 0.42
clpC1 4038359 c.2346A>G synonymous_variant 0.42
clpC1 4038368 c.2337T>C synonymous_variant 0.36
clpC1 4038388 c.2317T>C synonymous_variant 0.23
clpC1 4038389 c.2316G>A synonymous_variant 0.23
clpC1 4038395 c.2310C>T synonymous_variant 0.2
clpC1 4038398 c.2307G>T synonymous_variant 0.2
clpC1 4038403 c.2302T>C synonymous_variant 0.21
clpC1 4038486 p.Gly740Thr missense_variant 0.22
clpC1 4038499 p.Ser736Gly missense_variant 0.3
clpC1 4038519 p.Arg729Gln missense_variant 0.35
clpC1 4038530 p.Glu725Asp missense_variant 0.35
clpC1 4038536 c.2169C>T synonymous_variant 0.38
clpC1 4038596 c.2109A>G synonymous_variant 0.35
clpC1 4038623 c.2082A>G synonymous_variant 0.39
clpC1 4038647 c.2058T>C synonymous_variant 0.37
clpC1 4038658 p.Lys683Gln missense_variant 0.37
clpC1 4038661 p.Ser682Thr missense_variant 0.36
clpC1 4038662 c.2043T>C synonymous_variant 0.35
clpC1 4038671 c.2034T>C synonymous_variant 0.4
clpC1 4038674 c.2031C>G synonymous_variant 0.43
clpC1 4038683 c.2022T>C synonymous_variant 0.4
clpC1 4038692 c.2013C>G synonymous_variant 0.27
clpC1 4038695 c.2010C>G synonymous_variant 0.26
clpC1 4038698 c.2007C>T synonymous_variant 0.24
clpC1 4038701 c.2004G>C synonymous_variant 0.24
clpC1 4038704 c.2001T>C synonymous_variant 0.24
clpC1 4038713 c.1992T>C synonymous_variant 0.32
clpC1 4038740 c.1965G>C synonymous_variant 0.36
clpC1 4038782 c.1923G>C synonymous_variant 0.5
clpC1 4038790 c.1915C>T synonymous_variant 0.55
clpC1 4038812 c.1893T>C synonymous_variant 0.51
clpC1 4038815 c.1890G>A synonymous_variant 0.53
clpC1 4038845 c.1858_1860delTCGinsAGC synonymous_variant 0.53
clpC1 4038878 c.1827A>G synonymous_variant 0.46
clpC1 4038890 c.1815G>A synonymous_variant 0.43
clpC1 4038908 c.1797C>G synonymous_variant 0.44
clpC1 4038914 c.1791G>C synonymous_variant 0.38
clpC1 4038917 c.1788C>T synonymous_variant 0.36
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.32
clpC1 4038953 c.1752A>G synonymous_variant 0.43
clpC1 4038956 c.1749T>C synonymous_variant 0.42
clpC1 4038965 c.1740T>C synonymous_variant 0.43
clpC1 4038971 c.1734T>C synonymous_variant 0.44
clpC1 4038974 c.1731T>C synonymous_variant 0.42
clpC1 4038980 c.1725C>T synonymous_variant 0.42
clpC1 4038989 c.1716T>C synonymous_variant 0.48
clpC1 4038997 c.1708T>C synonymous_variant 0.49
clpC1 4039021 c.1684C>T synonymous_variant 0.49
clpC1 4039022 c.1683A>G synonymous_variant 0.48
clpC1 4039073 c.1632C>T synonymous_variant 0.43
clpC1 4039085 c.1620A>G synonymous_variant 0.4
clpC1 4039097 c.1608G>C synonymous_variant 0.39
clpC1 4039103 c.1602T>C synonymous_variant 0.33
clpC1 4039106 c.1599G>C synonymous_variant 0.33
clpC1 4039112 c.1593C>G synonymous_variant 0.36
clpC1 4039121 c.1584T>C synonymous_variant 0.33
clpC1 4039133 c.1572C>G synonymous_variant 0.3
clpC1 4039136 c.1569C>T synonymous_variant 0.31
clpC1 4039140 p.Glu522Val missense_variant 0.31
clpC1 4039142 c.1563A>G synonymous_variant 0.32
clpC1 4039145 c.1560G>C synonymous_variant 0.34
clpC1 4039169 p.Glu512Asp missense_variant 0.47
clpC1 4039172 c.1533A>G synonymous_variant 0.48
clpC1 4039178 c.1527G>C synonymous_variant 0.45
clpC1 4039183 c.1522T>C synonymous_variant 0.44
clpC1 4039190 c.1515C>G synonymous_variant 0.46
clpC1 4039223 c.1482C>T synonymous_variant 0.42
clpC1 4039226 c.1479T>C synonymous_variant 0.42
clpC1 4039238 c.1467C>T synonymous_variant 0.43
clpC1 4039268 c.1437C>T synonymous_variant 0.44
clpC1 4039274 c.1431G>T synonymous_variant 0.41
clpC1 4039277 c.1428C>T synonymous_variant 0.46
clpC1 4039283 c.1422C>T synonymous_variant 0.45
clpC1 4039286 c.1419T>C synonymous_variant 0.47
clpC1 4039292 c.1413C>T synonymous_variant 0.45
clpC1 4039319 p.Ala462Thr missense_variant 0.47
clpC1 4039322 c.1383T>G synonymous_variant 0.47
clpC1 4039328 c.1377A>T synonymous_variant 0.51
clpC1 4039338 p.Thr456Gln missense_variant 0.53
clpC1 4039355 c.1350G>T synonymous_variant 0.52
clpC1 4039391 c.1314T>G synonymous_variant 0.51
clpC1 4039409 c.1296T>C synonymous_variant 0.45
clpC1 4039412 c.1293T>G synonymous_variant 0.47
clpC1 4039430 c.1275T>C synonymous_variant 0.41
clpC1 4039442 c.1263A>G synonymous_variant 0.42
clpC1 4039454 c.1251A>T synonymous_variant 0.47
clpC1 4039463 c.1242C>G synonymous_variant 0.48
clpC1 4039466 c.1239T>C synonymous_variant 0.46
clpC1 4039469 c.1236T>C synonymous_variant 0.42
clpC1 4039472 c.1233G>T synonymous_variant 0.41
clpC1 4039481 c.1224T>C synonymous_variant 0.48
clpC1 4039484 c.1221T>C synonymous_variant 0.47
clpC1 4039517 c.1188C>G synonymous_variant 0.4
clpC1 4039552 c.1153C>T synonymous_variant 0.19
clpC1 4039553 c.1152C>T synonymous_variant 0.19
clpC1 4039556 c.1149G>C synonymous_variant 0.21
clpC1 4039562 c.1143C>G synonymous_variant 0.25
clpC1 4039565 c.1140G>C synonymous_variant 0.25
clpC1 4039574 p.Ala377Ser missense_variant 0.26
clpC1 4039589 c.1116G>T synonymous_variant 0.33
clpC1 4039610 c.1095G>C synonymous_variant 0.27
clpC1 4039616 c.1089G>C synonymous_variant 0.29
clpC1 4039622 c.1083C>G synonymous_variant 0.31
clpC1 4039661 c.1044T>C synonymous_variant 0.36
clpC1 4039673 c.1032G>C synonymous_variant 0.32
clpC1 4039694 c.1011G>C synonymous_variant 0.32
clpC1 4039715 c.990G>A synonymous_variant 0.39
clpC1 4039724 c.981A>G synonymous_variant 0.38
clpC1 4039727 c.978C>T synonymous_variant 0.35
clpC1 4039748 c.957G>C synonymous_variant 0.27
clpC1 4039751 c.954A>G synonymous_variant 0.27
clpC1 4039760 c.945T>C synonymous_variant 0.29
clpC1 4039766 c.939T>C synonymous_variant 0.29
clpC1 4039769 c.936C>G synonymous_variant 0.31
clpC1 4039778 c.927A>G synonymous_variant 0.32
clpC1 4039781 c.924G>C synonymous_variant 0.31
clpC1 4039790 c.915C>G synonymous_variant 0.31
clpC1 4039796 c.909C>T synonymous_variant 0.34
clpC1 4039817 c.888A>T synonymous_variant 0.29
clpC1 4039820 c.885T>C synonymous_variant 0.28
clpC1 4039826 c.879C>G synonymous_variant 0.29
clpC1 4039831 c.874T>C synonymous_variant 0.31
clpC1 4039850 c.855T>C synonymous_variant 0.37
clpC1 4039865 c.840T>C synonymous_variant 0.38
clpC1 4039898 c.807C>G synonymous_variant 0.38
clpC1 4039931 c.774T>C synonymous_variant 0.4
clpC1 4039934 c.771G>C synonymous_variant 0.35
clpC1 4039946 c.759A>T synonymous_variant 0.33
clpC1 4039952 c.753T>C synonymous_variant 0.35
clpC1 4039955 c.750G>C synonymous_variant 0.35
clpC1 4039958 c.747G>C synonymous_variant 0.37
clpC1 4039979 c.726C>G synonymous_variant 0.4
clpC1 4039997 c.708C>T synonymous_variant 0.41
clpC1 4040021 c.684A>C synonymous_variant 0.38
clpC1 4040024 c.681A>G synonymous_variant 0.36
clpC1 4040030 c.675C>G synonymous_variant 0.33
clpC1 4040033 c.672G>C synonymous_variant 0.35
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.3
clpC1 4040093 c.612C>G synonymous_variant 0.3
clpC1 4040105 c.600C>G synonymous_variant 0.39
clpC1 4040138 c.567G>C synonymous_variant 0.37
clpC1 4040147 c.558A>G synonymous_variant 0.37
clpC1 4040162 c.543G>C synonymous_variant 0.26
clpC1 4040165 c.540G>T synonymous_variant 0.23
clpC1 4040171 c.534C>G synonymous_variant 0.2
clpC1 4040180 c.525C>G synonymous_variant 0.25
clpC1 4040243 c.462C>G synonymous_variant 0.25
clpC1 4040249 c.456A>G synonymous_variant 0.28
clpC1 4040267 c.438A>G synonymous_variant 0.34
clpC1 4040273 c.432T>C synonymous_variant 0.31
clpC1 4040276 c.427_429delTCCinsAGT synonymous_variant 0.28
clpC1 4040288 c.417C>T synonymous_variant 0.3
clpC1 4040321 c.384C>T synonymous_variant 0.47
clpC1 4040342 c.363C>G synonymous_variant 0.42
clpC1 4040354 c.351A>G synonymous_variant 0.32
clpC1 4040357 c.348T>C synonymous_variant 0.31
clpC1 4040363 c.342A>T synonymous_variant 0.37
clpC1 4040369 c.336C>G synonymous_variant 0.32
clpC1 4040380 c.325T>C synonymous_variant 0.29
clpC1 4040387 c.318A>G synonymous_variant 0.33
clpC1 4040393 c.312G>C synonymous_variant 0.29
clpC1 4040408 c.297C>A synonymous_variant 0.19
clpC1 4040411 c.294T>G synonymous_variant 0.21
clpC1 4040423 c.282A>G synonymous_variant 0.23
clpC1 4040426 c.279T>C synonymous_variant 0.25
clpC1 4040431 c.274T>C synonymous_variant 0.26
clpC1 4040435 c.270G>C synonymous_variant 0.26
clpC1 4040444 c.261C>T synonymous_variant 0.28
clpC1 4040456 c.249C>T synonymous_variant 0.25
clpC1 4040459 c.246C>G synonymous_variant 0.27
clpC1 4040465 c.240T>C synonymous_variant 0.36
clpC1 4040471 c.234T>C synonymous_variant 0.41
clpC1 4040480 c.225T>C synonymous_variant 0.4
clpC1 4040486 c.219G>C synonymous_variant 0.41
clpC1 4040522 c.183T>C synonymous_variant 0.33
clpC1 4040528 c.177G>C synonymous_variant 0.3
clpC1 4040531 c.174T>C synonymous_variant 0.28
clpC1 4040534 c.171A>G synonymous_variant 0.28
clpC1 4040537 c.168G>C synonymous_variant 0.3
clpC1 4040549 c.154_156delTTGinsCTT synonymous_variant 0.33
clpC1 4040561 c.144A>G synonymous_variant 0.33
clpC1 4040567 c.138C>G synonymous_variant 0.29
clpC1 4040573 c.132T>C synonymous_variant 0.22
clpC1 4040582 c.123G>T synonymous_variant 0.18
clpC1 4040588 c.117T>C synonymous_variant 0.17
clpC1 4040591 c.114C>T synonymous_variant 0.17
clpC1 4040606 c.99T>C synonymous_variant 0.18
clpC1 4040644 c.61A>C synonymous_variant 0.25
clpC1 4040654 c.51G>A synonymous_variant 0.22
clpC1 4040657 c.48T>C synonymous_variant 0.21
clpC1 4040669 c.36C>G synonymous_variant 0.21
clpC1 4040695 c.10C>A synonymous_variant 0.28
clpC1 4040711 c.-7G>A upstream_gene_variant 0.17
panD 4044126 c.156T>C synonymous_variant 0.18
panD 4044138 c.144T>C synonymous_variant 0.23
panD 4044141 c.141C>G synonymous_variant 0.24
panD 4044150 c.132A>G synonymous_variant 0.24
panD 4044159 c.123C>T synonymous_variant 0.24
panD 4044162 c.120A>G synonymous_variant 0.24
panD 4044165 c.117G>C synonymous_variant 0.22
panD 4044177 c.105C>G synonymous_variant 0.26
panD 4044188 c.94T>C synonymous_variant 0.26
panD 4044195 c.87T>C synonymous_variant 0.23
panD 4044201 c.81C>G synonymous_variant 0.24
panD 4044225 c.57C>T synonymous_variant 0.22
panD 4044228 c.54C>T synonymous_variant 0.21
panD 4044237 c.45G>C synonymous_variant 0.21
panD 4044240 c.42G>T synonymous_variant 0.21
panD 4044261 c.21G>A synonymous_variant 0.22
panD 4044273 c.9G>C synonymous_variant 0.19
embC 4240486 c.624G>A synonymous_variant 0.2
embC 4240489 c.627A>G synonymous_variant 0.18
embC 4240490 p.Pro210Ala missense_variant 0.18
embC 4240495 c.633T>C synonymous_variant 0.19
embC 4240717 c.855T>C synonymous_variant 0.19
embC 4240726 c.864G>C synonymous_variant 0.27
embC 4240741 c.879C>T synonymous_variant 0.29
embC 4240783 c.921G>C synonymous_variant 0.42
embC 4240789 c.927T>C synonymous_variant 0.39
embC 4240811 p.Phe317Leu missense_variant 0.33
embC 4240819 c.957A>G synonymous_variant 0.32
embC 4240831 c.969T>G synonymous_variant 0.28
embC 4240837 c.975C>G synonymous_variant 0.33
embC 4240859 p.Leu333Ile missense_variant 0.31
embC 4240867 c.1005T>G synonymous_variant 0.28
embC 4240870 c.1008T>C synonymous_variant 0.3
embC 4240879 c.1017G>C synonymous_variant 0.26
embC 4240885 c.1023T>C synonymous_variant 0.24
embC 4240897 c.1035C>G synonymous_variant 0.23
embC 4240900 c.1038A>G synonymous_variant 0.23
embC 4240918 c.1056G>C synonymous_variant 0.23
embC 4240921 c.1059C>G synonymous_variant 0.24
embC 4240927 c.1065C>T synonymous_variant 0.24
embC 4241050 c.1188T>G synonymous_variant 0.2
embC 4241059 c.1197G>A synonymous_variant 0.26
embC 4241086 c.1224G>C synonymous_variant 0.32
embC 4241101 c.1239G>C synonymous_variant 0.34
embC 4241121 p.Ser420Asn missense_variant 0.32
embC 4241140 c.1278A>G synonymous_variant 0.29
embC 4241551 c.1689A>C synonymous_variant 0.18
embC 4241567 p.Ile569Val missense_variant 0.23
embC 4241584 c.1722T>C synonymous_variant 0.28
embC 4241587 c.1725C>G synonymous_variant 0.3
embC 4241614 c.1752A>C synonymous_variant 0.26
embC 4241617 c.1755G>A synonymous_variant 0.26
embC 4241623 c.1761C>A synonymous_variant 0.2
embC 4241626 c.1764T>C synonymous_variant 0.2
embC 4241635 c.1773G>C synonymous_variant 0.19
embC 4241644 c.1782G>C synonymous_variant 0.17
embC 4241648 c.1786T>C synonymous_variant 0.16
embA 4242367 c.-866C>A upstream_gene_variant 0.32
embC 4242375 p.Arg838Gln missense_variant 0.38
embA 4242391 c.-842G>T upstream_gene_variant 0.41
embA 4242400 c.-833C>G upstream_gene_variant 0.43
embC 4242402 p.Arg847His missense_variant 0.44
embA 4242406 c.-827A>T upstream_gene_variant 0.46
embA 4242427 c.-806A>G upstream_gene_variant 0.38
embC 4242428 p.Ala856Pro missense_variant 0.38
embC 4242434 p.Val858Ile missense_variant 0.36
embA 4242448 c.-785C>G upstream_gene_variant 0.26
embA 4242457 c.-776G>C upstream_gene_variant 0.18
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242805 c.-428G>A upstream_gene_variant 0.23
embA 4242826 c.-407G>C upstream_gene_variant 0.25
embA 4242827 c.-406C>T upstream_gene_variant 0.24
embA 4242832 c.-401A>G upstream_gene_variant 0.27
embA 4242838 c.-395C>G upstream_gene_variant 0.27
embA 4242844 c.-389A>G upstream_gene_variant 0.26
embA 4242847 c.-386C>G upstream_gene_variant 0.27
embA 4242853 c.-380C>T upstream_gene_variant 0.27
embC 4242863 p.Tyr1001Asn missense_variant 0.32
embA 4242895 c.-338C>T upstream_gene_variant 0.32
embA 4242904 c.-329C>T upstream_gene_variant 0.24
embA 4242910 c.-323C>T upstream_gene_variant 0.22
embA 4242919 c.-314A>G upstream_gene_variant 0.2
embA 4242925 c.-308C>T upstream_gene_variant 0.18
embA 4242928 c.-305A>G upstream_gene_variant 0.19
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4244843 c.1611G>C synonymous_variant 0.16
embA 4244846 c.1614C>T synonymous_variant 0.17
embA 4244858 c.1626G>A synonymous_variant 0.2
embA 4244885 c.1653A>G synonymous_variant 0.36
embA 4244886 c.1654C>T synonymous_variant 0.36
embA 4244897 c.1665T>C synonymous_variant 0.38
embA 4244900 c.1668G>C synonymous_variant 0.39
embA 4244904 p.Val558Leu missense_variant 0.36
embA 4244909 c.1677C>G synonymous_variant 0.32
embA 4244916 c.1684C>T synonymous_variant 0.3
embA 4244921 c.1689C>G synonymous_variant 0.29
embA 4244933 c.1701A>G synonymous_variant 0.23
embA 4244936 c.1704C>G synonymous_variant 0.25
embA 4244939 c.1707G>A synonymous_variant 0.25
embA 4245093 p.Ile621Val missense_variant 0.17
embA 4245101 c.1869G>C synonymous_variant 0.27
embA 4245136 p.Tyr635Phe missense_variant 0.37
embA 4245149 c.1917C>A synonymous_variant 0.42
embA 4245153 p.Ile641Val missense_variant 0.41
embA 4245174 p.Ser648Thr missense_variant 0.43
embA 4245182 c.1950T>C synonymous_variant 0.42
embA 4245186 p.Thr652Ala missense_variant 0.4
embA 4245198 p.Leu656Ala missense_variant 0.24
embA 4245207 c.1975T>C synonymous_variant 0.21
embA 4245215 c.1983A>C synonymous_variant 0.2
embB 4245713 c.-801G>C upstream_gene_variant 0.21
embB 4245725 c.-789A>C upstream_gene_variant 0.19
embB 4245726 c.-788_-786delTTGinsCTC upstream_gene_variant 0.19
embB 4245737 c.-777A>C upstream_gene_variant 0.19
embB 4245740 c.-774T>C upstream_gene_variant 0.21
embB 4247113 c.600G>T synonymous_variant 0.17
embB 4247371 c.858C>G synonymous_variant 0.17
embB 4247380 c.867C>G synonymous_variant 0.18
embB 4247386 c.873T>C synonymous_variant 0.18
embB 4247389 c.876C>G synonymous_variant 0.19
embB 4247395 c.882C>A synonymous_variant 0.24
embB 4247401 c.888T>C synonymous_variant 0.24
embB 4247437 c.924A>G synonymous_variant 0.28
embB 4247446 c.933C>T synonymous_variant 0.26
embB 4247470 c.957T>C synonymous_variant 0.28
embB 4247494 c.981G>A synonymous_variant 0.27
embB 4247497 c.984T>C synonymous_variant 0.28
embB 4247500 c.987C>G synonymous_variant 0.28
embB 4247512 c.999T>C synonymous_variant 0.34
embB 4247519 c.1006C>T synonymous_variant 0.35
embB 4247554 c.1041T>C synonymous_variant 0.27
embB 4247566 c.1053C>A synonymous_variant 0.23
embB 4247572 c.1059A>C synonymous_variant 0.2
embB 4247576 c.1063C>T synonymous_variant 0.2
embB 4247579 p.Ala356Ile missense_variant 0.2
embB 4247590 c.1077A>G synonymous_variant 0.18
embB 4247972 p.Thr487Phe missense_variant 0.32
embB 4247977 c.1464C>G synonymous_variant 0.32
embB 4247983 c.1470G>C synonymous_variant 0.39
embB 4247992 c.1479G>A synonymous_variant 0.39
embB 4248007 c.1494C>G synonymous_variant 0.49
embB 4248035 p.Val508Ile missense_variant 0.57
embB 4248041 p.Ala510Thr missense_variant 0.59
embB 4248044 p.Lys511Asp missense_variant 0.57
embB 4248055 c.1542G>C synonymous_variant 0.52
embB 4248064 c.1551G>C synonymous_variant 0.41
embB 4248070 c.1557T>C synonymous_variant 0.4
embB 4248085 c.1572T>C synonymous_variant 0.36
embB 4248097 c.1584C>G synonymous_variant 0.35
embB 4248118 c.1605T>C synonymous_variant 0.28
embB 4248130 c.1617G>C synonymous_variant 0.19
embB 4248157 c.1644A>G synonymous_variant 0.17
embB 4248161 c.1648C>T synonymous_variant 0.18
embB 4248172 c.1659G>C synonymous_variant 0.23
embB 4248173 p.Val554Leu missense_variant 0.22
embB 4248199 c.1686A>C synonymous_variant 0.18
embB 4248200 p.Ile563Val missense_variant 0.18
embB 4248206 p.Ser565Gly missense_variant 0.19
embB 4248211 c.1698G>C synonymous_variant 0.19
embB 4248217 c.1704C>G synonymous_variant 0.18
embB 4248220 c.1707A>G synonymous_variant 0.19
embB 4248226 c.1713G>C synonymous_variant 0.19
embB 4248232 c.1719G>A synonymous_variant 0.22
embB 4248233 c.1720C>T synonymous_variant 0.22
embB 4248241 c.1728C>T synonymous_variant 0.23
embB 4248277 c.1764G>C synonymous_variant 0.23
embB 4248280 c.1767C>G synonymous_variant 0.26
embB 4248316 c.1803C>G synonymous_variant 0.32
embB 4248319 c.1806A>G synonymous_variant 0.32
embB 4248322 c.1809G>C synonymous_variant 0.33
embB 4248328 c.1815G>A synonymous_variant 0.31
embB 4248337 c.1824G>C synonymous_variant 0.29
embB 4248350 c.1837T>C synonymous_variant 0.25
embB 4248355 c.1842A>G synonymous_variant 0.19
embB 4248358 c.1845C>G synonymous_variant 0.17
embB 4248362 p.Ser617Thr missense_variant 0.17
embB 4249339 c.2826T>C synonymous_variant 0.28
embB 4249343 p.Val944Ile missense_variant 0.32
embB 4249351 c.2838C>G synonymous_variant 0.3
embB 4249354 c.2841G>A synonymous_variant 0.29
embB 4249369 c.2856T>C synonymous_variant 0.39
embB 4249375 c.2862G>C synonymous_variant 0.38
embB 4249381 c.2868A>G synonymous_variant 0.38
embB 4249382 p.Pro957Ala missense_variant 0.38
embB 4249387 p.Glu958Asp missense_variant 0.38
embB 4249417 c.2904A>G synonymous_variant 0.45
embB 4249423 p.Asp970Glu missense_variant 0.44
embB 4249432 c.2919A>G synonymous_variant 0.4
embB 4249433 c.2920C>T synonymous_variant 0.43
embB 4249441 c.2928A>G synonymous_variant 0.38
embB 4249444 c.2931T>C synonymous_variant 0.39
embB 4249447 c.2934G>C synonymous_variant 0.4
embB 4249469 p.Leu986Met missense_variant 0.39
embB 4249486 c.2973T>G synonymous_variant 0.28
embB 4249487 c.2974T>C synonymous_variant 0.28
embB 4249492 c.2979C>A synonymous_variant 0.3
embB 4249521 p.Ala1003Val missense_variant 0.23
embB 4249525 c.3012T>C synonymous_variant 0.17
embB 4249528 c.3015C>T synonymous_variant 0.17
embB 4249529 p.Ile1006Val missense_variant 0.17
embB 4249532 p.Ala1007Thr missense_variant 0.18
embB 4249537 c.3024A>G synonymous_variant 0.19
embB 4249545 p.Lys1011Arg missense_variant 0.18
aftB 4267595 c.1242C>T synonymous_variant 0.16
aftB 4267622 c.1213_1215delTCGinsAGC synonymous_variant 0.18
aftB 4267625 c.1212T>C synonymous_variant 0.17
aftB 4267634 p.Arg401His missense_variant 0.19
aftB 4267647 p.Asp397Cys missense_variant 0.82
aftB 4267655 c.1182C>G synonymous_variant 0.19
aftB 4268081 c.756A>G synonymous_variant 0.19
aftB 4268084 c.753G>C synonymous_variant 0.19
aftB 4268096 c.741C>T synonymous_variant 0.23
aftB 4268099 c.738G>T synonymous_variant 0.24
aftB 4268105 c.732T>C synonymous_variant 0.23
aftB 4268120 c.717C>G synonymous_variant 0.24
aftB 4268123 p.Ser238Gly missense_variant 0.25
aftB 4268126 c.711G>C synonymous_variant 0.25
aftB 4268129 c.708T>G synonymous_variant 0.25
aftB 4268138 c.699A>C synonymous_variant 0.27
aftB 4268144 c.693T>C synonymous_variant 0.26
aftB 4269123 c.-287T>G upstream_gene_variant 0.16
ubiA 4269131 p.Leu235Met missense_variant 0.19
aftB 4269138 c.-302C>T upstream_gene_variant 0.24
aftB 4269144 c.-308C>G upstream_gene_variant 0.23
ubiA 4269152 p.Ala228Ser missense_variant 0.24
aftB 4269153 c.-317C>G upstream_gene_variant 0.24
aftB 4269156 c.-320C>G upstream_gene_variant 0.24
aftB 4269164 c.-328T>C upstream_gene_variant 0.27
aftB 4269177 c.-341G>A upstream_gene_variant 0.3
aftB 4269183 c.-347T>C upstream_gene_variant 0.35
aftB 4269210 c.-374G>A upstream_gene_variant 0.39
aftB 4269222 c.-386T>G upstream_gene_variant 0.37
aftB 4269225 c.-389C>A upstream_gene_variant 0.36
aftB 4269234 c.-398A>G upstream_gene_variant 0.33
aftB 4269242 c.-406C>T upstream_gene_variant 0.31
ubiA 4269243 p.His197Gln missense_variant 0.31
aftB 4269248 c.-412C>T upstream_gene_variant 0.32
aftB 4269252 c.-416C>G upstream_gene_variant 0.31
aftB 4269267 c.-431C>G upstream_gene_variant 0.24
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0