Rv0668 - c.834G>T


Drug resistance types
30 Sensitive 21 RR-TB 79 HR-TB 51 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 72 Other
lineage Counts
lineage Count
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9 44
lineage2.2.1 9
M.canetti 11
lineage2.1;lineage4.9 6
La1.7.1;lineage4.9 1
La1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage5.2 2
M.canetti;lineage4.9 4
La3;M.canetti 9
lineage4.1.2.1 9
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.2.1.2.1 1
lineage4.3.3 3
lineage2.2.1.1 2
La1.7;M.canetti;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9 12
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage4.2;lineage4.9 3
5
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage3 5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9 8
lineage4.1;lineage4.8 2
La1.7.1 1
lineage4.3.4.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.8 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.4.2.1 2
lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.4.1.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.2 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage3 1
lineage2.1;lineage4.9;lineage6.3 2
La2;M.canetti 1
La1.8.1 2
lineage4.6.1.1 1
lineage4.3.4 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7 1
lineage1;lineage4.9 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage6.1.3 1
lineage2.2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
M.canetti;lineage2.2 3
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage4.1.1.3 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.3.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 258
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR18289195 Sensitive M.canetti None
ERR266120 Sensitive M.canetti None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR551181 Sensitive M.canetti None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR1336821 Sensitive La3;M.canetti None
ERR551182 Sensitive M.canetti None
SRR29050859 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR551180 Sensitive M.canetti None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR3675383 Sensitive lineage4.9 None
ERR9786843 Other None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2517528 RR-TB lineage3 nl
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR7240492 HR-TB La1.7.1 None
ERR3275196 Other lineage2.2.1 nl
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR400529 Other lineage3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1336822 Sensitive M.canetti None
SRR3675385 Other La1.7;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3597004 Sensitive M.canetti None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675501 Other La1.7;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1336824 Sensitive La3;M.canetti None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR181887 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR13423649 Sensitive lineage2.2.1 None
SRR3675461 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR161149 Sensitive lineage4.3.4.2.1 mw
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR990545 Other lineage3 None
SRR13861528 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR6046594 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961549 Other La1.2 None
ERR1043164 Other La3;M.canetti None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR266126 Sensitive La2;M.canetti None
ERR3797023 HR-TB La1.8.1 None
SRR13861510 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266125 Other La3;M.canetti None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465597 Sensitive lineage4.1.2.1 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5162090 RR-TB lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR4830353 Other La1.7 None
ERR323115 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR176751 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR6831950 Sensitive lineage4.3.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR1336826 Sensitive La3;M.canetti None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
ERR1043163 Other La3;M.canetti None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR1336823 Sensitive La3;M.canetti None
ERR736875 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR24061597 Sensitive M.canetti None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR10522763 Sensitive M.canetti None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR10522783 Sensitive M.canetti None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR1063883 HR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161037 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None