Rv0668 - c.834G>T
Drug resistance types
11 Sensitive
2 RR-TB
98 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 12 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 3 |
| lineage4.9 | 17 |
| lineage4.5 | 1 |
| 80 | |
| La1.8.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;La1 | 1 |
| La1.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4 | 9 |
| lineage4.1.2.1 | 14 |
| lineage4.8 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 5 |
| lineage4.6.2.2 | 2 |
| lineage1.1 | 1 |
| lineage5.2 | 2 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| La1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage2 | 1 |
| lineage2.2.2 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 184 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR13861510 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR24061597 | Sensitive | None | SRR23961549 | Other | La1.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176778 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675488 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | ERR176751 | HR-TB | None | ERR4813317 | Sensitive | lineage4.1.2.1 | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | ERR181887 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR161149 | Sensitive | lineage4.3.4.2.1 | mw | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR1035138 | MDR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR2514692 | Other | None | ERR2517265 | Sensitive | lineage4.1.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045327 | HR-TB | None | SRR5535715 | HR-TB | lineage2.2.1 | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4830353 | Other | None | ERR2517528 | Other | lineage3 | nl | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR5311090 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7535086 | Other | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323045 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR400529 | Other | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736856 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR990545 | Other | lineage3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None |
|---|
