Run ID: SRR1180137
Sample name:
Date: 2024-10-03T16:09:03.104527
Number of reads: 1447846
Percentage reads mapped: 58.38
Median coverage: 31.0
Strain: lineage2.2.1
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage2 | East-Asian | RD105 | 1.0 |
lineage2.2.1 | East-Asian (Beijing) | RD105;RD207;RD181 | 0.91 |
lineage2.2 | East-Asian (Beijing) | RD105;RD207 | 0.95 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | embB | p.His312Arg | Mutation from literature | |
pyrazinamide | ||||
streptomycin | rrs | n.462C>T | Uncertain significance | Mutation from literature |
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | ||||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 0.58 | streptomycin | Uncertain significance | Mutation from literature |
embB | 4247448 | p.His312Arg | missense_variant | 0.41 | ethambutol | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 522 | c.522T>C | synonymous_variant | 0.27 | isoniazid | Not assoc w R - Interim |
dnaA | 525 | c.525T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 528 | c.528G>T | synonymous_variant | 0.26 | isoniazid | |
dnaA | 531 | c.531C>T | synonymous_variant | 0.25 | isoniazid | Not assoc w R - Interim |
dnaA | 534 | c.534T>C | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 558 | c.558G>C | synonymous_variant | 0.33 | isoniazid | |
dnaA | 571 | c.571T>C | synonymous_variant | 0.34 | isoniazid | |
dnaA | 582 | c.582A>C | synonymous_variant | 0.35 | isoniazid | Not assoc w R - Interim |
dnaA | 585 | c.585A>G | synonymous_variant | 0.36 | isoniazid | |
dnaA | 591 | c.591C>G | synonymous_variant | 0.37 | isoniazid | |
dnaA | 597 | c.597C>G | synonymous_variant | 0.36 | isoniazid | Not assoc w R - Interim |
dnaA | 600 | c.600T>C | synonymous_variant | 0.35 | isoniazid | |
dnaA | 609 | c.609C>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 610 | c.610C>T | synonymous_variant | 0.26 | isoniazid | |
dnaA | 630 | c.630C>G | synonymous_variant | 0.24 | isoniazid | |
dnaA | 771 | c.771A>G | synonymous_variant | 0.22 | isoniazid | |
dnaA | 777 | c.777A>G | synonymous_variant | 0.22 | isoniazid | |
dnaA | 795 | c.795A>C | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 798 | c.798C>T | synonymous_variant | 0.23 | isoniazid | Not assoc w R - Interim |
dnaA | 805 | c.805T>C | synonymous_variant | 0.28 | isoniazid | |
dnaA | 813 | c.813C>T | synonymous_variant | 0.25 | isoniazid | |
dnaA | 819 | c.819C>T | synonymous_variant | 0.22 | isoniazid | |
dnaA | 822 | c.822A>G | synonymous_variant | 0.21 | isoniazid | |
dnaA | 828 | c.828T>C | synonymous_variant | 0.2 | isoniazid | Not assoc w R - Interim |
dnaA | 831 | c.831A>G | synonymous_variant | 0.24 | isoniazid | |
dnaA | 837 | c.837A>G | synonymous_variant | 0.28 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.28 | isoniazid | |
dnaA | 846 | c.846T>C | synonymous_variant | 0.3 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 0.3 | isoniazid | |
dnaA | 882 | c.882C>T | synonymous_variant | 0.33 | isoniazid | |
dnaA | 885 | c.885T>C | synonymous_variant | 0.31 | isoniazid | |
dnaA | 897 | c.897A>G | synonymous_variant | 0.27 | isoniazid | |
dnaA | 1153 | c.1153T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 1191 | c.1191T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 1197 | c.1197T>G | synonymous_variant | 0.25 | isoniazid | |
dnaA | 1203 | c.1203T>C | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1220 | p.Asn407Ser | missense_variant | 0.29 | isoniazid | |
dnaA | 1230 | c.1230A>G | synonymous_variant | 0.31 | isoniazid | |
dnaA | 1242 | c.1242G>C | synonymous_variant | 0.28 | isoniazid | |
dnaA | 1245 | c.1245G>C | synonymous_variant | 0.28 | isoniazid | Not assoc w R - Interim |
dnaA | 1254 | c.1254T>G | synonymous_variant | 0.35 | isoniazid | |
dnaA | 1278 | c.1278T>C | synonymous_variant | 0.37 | isoniazid | |
dnaA | 1293 | c.1293T>C | synonymous_variant | 0.36 | isoniazid | |
dnaA | 1425 | c.1425C>T | synonymous_variant | 0.19 | isoniazid | |
dnaA | 1428 | c.1428C>G | synonymous_variant | 0.19 | isoniazid | |
dnaA | 1441 | c.1441C>T | synonymous_variant | 0.19 | isoniazid | |
dnaA | 1470 | c.1470C>T | synonymous_variant | 0.17 | isoniazid | |
gyrB | 6142 | c.903G>C | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6196 | c.957C>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6215 | p.Ser326Thr | missense_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6223 | c.984G>C | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6292 | c.1053G>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6295 | c.1056A>G | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6301 | c.1062G>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6304 | c.-998C>G | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6307 | c.1068T>G | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6313 | c.-989C>T | upstream_gene_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6319 | c.1080G>C | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 6649 | c.-653T>C | upstream_gene_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6655 | c.-647T>C | upstream_gene_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6670 | c.-632G>C | upstream_gene_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6673 | c.-629A>C | upstream_gene_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6676 | c.-626T>G | upstream_gene_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6706 | c.-596G>A | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6712 | c.-590G>T | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6727 | c.-575G>T | upstream_gene_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6728 | c.-574_-572delCTAinsTTG | upstream_gene_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6775 | c.1536G>C | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6793 | c.1554T>C | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6798 | p.Gly520Ala | missense_variant | 0.48 | levofloxacin | Not assoc w R |
moxifloxacin | Uncertain significance | |||||
gyrB | 6808 | c.1569C>T | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6838 | c.-464C>T | upstream_gene_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6841 | c.1602T>C | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6853 | c.-449A>G | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6856 | c.1617T>C | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6878 | c.1639T>C | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6881 | c.1642T>C | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7165 | c.-137C>G | upstream_gene_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7178 | c.-124T>C | upstream_gene_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7502 | c.201C>T | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7514 | c.213C>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7523 | c.222C>G | synonymous_variant | 0.23 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7526 | c.225G>T | synonymous_variant | 0.23 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7532 | c.231T>G | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7538 | c.237G>A | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.28 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7556 | c.255C>T | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7559 | c.258G>C | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7601 | c.300C>G | synonymous_variant | 0.25 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>G | synonymous_variant | 0.19 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7622 | c.321C>T | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7631 | c.330G>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7637 | c.336C>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7733 | c.432A>G | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7763 | c.462T>C | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7769 | c.468C>T | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7778 | c.477G>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7784 | c.483A>G | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7787 | c.486G>A | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7793 | c.492G>C | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7814 | c.513C>G | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7832 | c.531G>T | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7835 | c.534A>C | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7859 | c.558A>G | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7865 | c.564T>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7868 | c.567C>T | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8075 | c.774G>A | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8078 | c.777A>G | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8090 | c.789C>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8096 | c.795T>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8099 | c.798T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8103 | p.Ser268Ala | missense_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8121 | c.820T>C | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8129 | c.828T>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8135 | c.834C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8156 | c.855T>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8168 | c.867A>G | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8267 | c.966G>C | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8327 | c.1026C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8330 | c.1029C>G | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8339 | c.1038A>C | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8340 | p.Ala347Ser | missense_variant | 0.4 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8372 | c.1071G>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8375 | c.1074G>C | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8382 | p.Leu361Met | missense_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8393 | c.1092T>C | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8401 | p.Asp367Ala | missense_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8462 | c.1161A>G | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8465 | c.1164C>G | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8472 | c.1171C>T | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8489 | c.1188A>G | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8504 | c.1203G>C | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8516 | c.1215T>C | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8519 | c.1218A>C | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8528 | c.1227G>C | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8546 | p.Asp415Glu | missense_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8552 | c.1251C>G | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8561 | c.1260A>C | synonymous_variant | 0.39 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8603 | c.1302A>G | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8619 | c.1318T>C | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8624 | c.1323G>C | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8627 | c.1326C>G | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8636 | c.1335A>C | synonymous_variant | 0.47 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8642 | c.1341A>G | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8655 | p.Ile452Val | missense_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 0.23 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8780 | p.Asp493Glu | missense_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8783 | c.1482G>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8810 | c.1509A>T | synonymous_variant | 0.27 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8817 | p.Ser506Ala | missense_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8822 | c.1521C>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8828 | c.1527T>C | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8829 | c.1528T>C | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8843 | c.1542G>A | synonymous_variant | 0.23 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8933 | c.1632G>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8966 | c.1665C>G | synonymous_variant | 0.48 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8967 | p.Ala556Arg | missense_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8990 | c.1689C>G | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.5 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9002 | c.1701C>T | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9017 | c.1716C>G | synonymous_variant | 0.42 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9023 | c.1722A>C | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9029 | c.1728T>G | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9051 | c.1750T>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9056 | c.1755C>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9065 | c.1764C>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9071 | c.1770G>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9074 | c.1773G>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9080 | c.1779G>C | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9230 | c.1929T>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9233 | c.1932C>G | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9242 | c.1941A>G | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9248 | c.1947G>C | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9267 | p.Asn656Gly | missense_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9291 | c.1990C>T | synonymous_variant | 0.51 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9296 | c.1995T>C | synonymous_variant | 0.47 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9299 | c.1998G>C | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9304 | p.Gly668Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9345 | c.2044A>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9362 | c.2061C>T | synonymous_variant | 0.33 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9365 | c.2064G>A | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
Rv0010c | 13876 | c.-318G>C | upstream_gene_variant | 0.23 | isoniazid | |
Rv0010c | 13890 | c.-332T>C | upstream_gene_variant | 0.37 | isoniazid | |
Rv0010c | 13893 | c.-335T>G | upstream_gene_variant | 0.38 | isoniazid | |
Rv0010c | 13903 | c.-345A>G | upstream_gene_variant | 0.41 | isoniazid | |
fgd1 | 490887 | c.105G>A | synonymous_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 490962 | c.180T>C | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491526 | c.744T>C | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491542 | c.760T>C | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491547 | c.765A>T | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491550 | c.768T>C | synonymous_variant | 0.37 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491560 | p.His260Thr | missense_variant | 0.34 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491569 | p.Asp263His | missense_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491578 | p.Ile266Leu | missense_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491601 | c.819T>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491603 | p.Ala274Glu | missense_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491610 | c.828A>C | synonymous_variant | 0.37 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491616 | c.834A>G | synonymous_variant | 0.37 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491620 | p.Ile280Val | missense_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R | |||||
mshA | 575590 | c.243T>G | synonymous_variant | 0.18 | isoniazid | |
ethionamide | ||||||
mshA | 575746 | c.399C>T | synonymous_variant | 0.25 | isoniazid | |
ethionamide | ||||||
mshA | 575770 | c.423G>A | synonymous_variant | 0.22 | isoniazid | |
ethionamide | ||||||
mshA | 575771 | p.Val142Ser | missense_variant | 0.22 | isoniazid | |
ethionamide | ||||||
mshA | 575779 | c.432A>G | synonymous_variant | 0.24 | isoniazid | |
ethionamide | ||||||
mshA | 575782 | c.435G>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
mshA | 575785 | c.438T>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
mshA | 575821 | c.474G>C | synonymous_variant | 0.3 | isoniazid | |
ethionamide | ||||||
mshA | 575824 | c.477T>A | synonymous_variant | 0.31 | isoniazid | |
ethionamide | ||||||
mshA | 575833 | c.486C>T | synonymous_variant | 0.3 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
mshA | 575845 | c.498C>G | synonymous_variant | 0.3 | isoniazid | |
ethionamide | ||||||
mshA | 575878 | c.531A>C | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
mshA | 575887 | c.540G>C | synonymous_variant | 0.39 | isoniazid | |
ethionamide | ||||||
mshA | 575893 | c.546C>G | synonymous_variant | 0.39 | isoniazid | |
ethionamide | ||||||
mshA | 575896 | c.549G>C | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
mshA | 575907 | p.Ala187Val | missense_variant | 0.73 | isoniazid | Not assoc w R |
ethionamide | Not assoc w R | |||||
mshA | 575938 | c.591G>T | synonymous_variant | 0.35 | isoniazid | |
ethionamide | ||||||
mshA | 575944 | c.597T>C | synonymous_variant | 0.32 | isoniazid | |
ethionamide | ||||||
mshA | 575953 | c.606G>C | synonymous_variant | 0.29 | isoniazid | |
ethionamide | ||||||
mshA | 575980 | c.633T>C | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 576004 | c.657T>C | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 576017 | p.Val224Leu | missense_variant | 0.24 | isoniazid | |
ethionamide | ||||||
mshA | 576022 | c.675T>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
ccsA | 619591 | c.-300G>C | upstream_gene_variant | 0.29 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619594 | c.-297G>C | upstream_gene_variant | 0.31 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619618 | c.-273C>G | upstream_gene_variant | 0.43 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619627 | c.-264C>G | upstream_gene_variant | 0.47 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619634 | c.-257T>A | upstream_gene_variant | 0.49 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619645 | c.-246G>C | upstream_gene_variant | 0.45 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619654 | c.-237A>G | upstream_gene_variant | 0.42 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619668 | c.-223_-222delCGinsGC | upstream_gene_variant | 0.35 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619672 | c.-219A>T | upstream_gene_variant | 0.31 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 619676 | c.-215C>G | upstream_gene_variant | 0.31 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620198 | p.Gln103Leu | missense_variant | 0.19 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620254 | c.364_366delCTCinsTTG | synonymous_variant | 0.26 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620265 | c.375C>G | synonymous_variant | 0.26 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620283 | c.393T>C | synonymous_variant | 0.28 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620284 | p.Ala132Pro | missense_variant | 0.28 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620288 | p.Arg133Gln | missense_variant | 0.28 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620295 | c.405G>C | synonymous_variant | 0.33 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620307 | c.417C>G | synonymous_variant | 0.35 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620317 | p.Val143Leu | missense_variant | 0.33 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620340 | c.450C>G | synonymous_variant | 0.36 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620349 | c.459A>G | synonymous_variant | 0.32 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620362 | p.Ala158Thr | missense_variant | 0.3 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620367 | c.477T>C | synonymous_variant | 0.31 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620373 | c.483C>G | synonymous_variant | 0.31 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620625 | p.Ile245Met | missense_variant | 1.0 | kanamycin | Uncertain significance |
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
Rv0565c | 656325 | c.1146C>G | synonymous_variant | 0.29 | ethionamide | |
Rv0565c | 656502 | c.969C>T | synonymous_variant | 0.25 | ethionamide | |
Rv0565c | 656511 | c.960T>C | synonymous_variant | 0.32 | ethionamide | Not assoc w R - Interim |
Rv0565c | 656534 | p.Arg313Gly | missense_variant | 0.33 | ethionamide | |
Rv0565c | 656538 | p.Ser311Ala | missense_variant | 0.33 | ethionamide | |
Rv0565c | 656568 | c.903G>C | synonymous_variant | 0.38 | ethionamide | |
Rv0565c | 656582 | p.Leu297Met | missense_variant | 0.39 | ethionamide | |
Rv0565c | 656583 | c.888A>G | synonymous_variant | 0.38 | ethionamide | |
Rv0565c | 656589 | c.882T>C | synonymous_variant | 0.39 | ethionamide | |
Rv0565c | 656604 | c.867G>C | synonymous_variant | 0.29 | ethionamide | |
Rv0565c | 656611 | p.Thr287Lys | missense_variant | 0.22 | ethionamide | |
Rv0565c | 657081 | c.390G>A | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
Rv0565c | 657142 | p.Arg110His | missense_variant | 0.97 | ethionamide | Uncertain significance |
Rv0565c | 657233 | p.Ile80Val | missense_variant | 0.21 | ethionamide | |
Rv0565c | 657237 | c.234A>G | synonymous_variant | 0.21 | ethionamide | |
Rv0565c | 657241 | p.Glu77Arg | missense_variant | 0.2 | ethionamide | |
Rv0565c | 657259 | p.Tyr71Phe | missense_variant | 0.23 | ethionamide | |
Rv0565c | 657261 | c.210C>G | synonymous_variant | 0.2 | ethionamide | |
Rv0565c | 657264 | c.207T>C | synonymous_variant | 0.23 | ethionamide | |
Rv0565c | 657267 | c.204G>C | synonymous_variant | 0.23 | ethionamide | |
Rv0565c | 657291 | c.180C>G | synonymous_variant | 0.25 | ethionamide | |
Rv0565c | 657300 | c.171C>G | synonymous_variant | 0.25 | ethionamide | |
Rv0565c | 657701 | c.-231C>G | upstream_gene_variant | 0.35 | ethionamide | |
Rv0565c | 657734 | c.-264T>C | upstream_gene_variant | 0.39 | ethionamide | |
hadA | 731774 | c.-156T>C | upstream_gene_variant | 0.2 | isoniazid | |
hadA | 731789 | c.-141A>G | upstream_gene_variant | 0.2 | isoniazid | |
hadA | 731792 | c.-138G>A | upstream_gene_variant | 0.21 | isoniazid | |
hadA | 731801 | c.-129C>G | upstream_gene_variant | 0.22 | isoniazid | |
hadA | 731816 | c.-114G>A | upstream_gene_variant | 0.21 | isoniazid | |
hadA | 732389 | p.Ser154Thr | missense_variant | 0.4 | isoniazid | |
hadA | 732396 | p.Gly156Ala | missense_variant | 0.43 | isoniazid | |
hadA | 732398 | p.Ala157Thr | missense_variant | 0.41 | isoniazid | |
nusG | 734407 | p.Val52Ile | missense_variant | 0.47 | rifampicin | |
nusG | 734421 | c.168A>G | synonymous_variant | 0.5 | rifampicin | |
nusG | 734424 | c.171G>C | synonymous_variant | 0.51 | rifampicin | |
nusG | 734442 | c.189G>A | synonymous_variant | 0.51 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.51 | rifampicin | |
nusG | 734460 | c.207G>T | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
nusG | 734472 | c.219T>C | synonymous_variant | 0.5 | rifampicin | |
nusG | 734475 | c.222T>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
nusG | 734532 | c.279A>G | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
nusG | 734538 | c.285C>T | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
nusG | 734541 | c.288A>G | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
nusG | 734556 | c.303C>T | synonymous_variant | 0.56 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 0.56 | rifampicin | |
nusG | 734580 | c.327T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
nusG | 734589 | c.336G>C | synonymous_variant | 0.42 | rifampicin | |
nusG | 734596 | c.343_345delTTGinsCTC | synonymous_variant | 0.38 | rifampicin | |
nusG | 734604 | c.351C>T | synonymous_variant | 0.38 | rifampicin | |
nusG | 734610 | c.357C>G | synonymous_variant | 0.4 | rifampicin | |
nusG | 734781 | c.528A>G | synonymous_variant | 0.26 | rifampicin | |
nusG | 734784 | c.531G>A | synonymous_variant | 0.26 | rifampicin | |
nusG | 734792 | p.Val180Ala | missense_variant | 0.25 | rifampicin | |
nusG | 734794 | p.Val181Ile | missense_variant | 0.27 | rifampicin | Uncertain significance |
nusG | 734814 | c.561G>C | synonymous_variant | 0.33 | rifampicin | |
nusG | 734826 | c.573A>G | synonymous_variant | 0.33 | rifampicin | |
nusG | 734829 | c.576C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
nusG | 734841 | c.588G>C | synonymous_variant | 0.29 | rifampicin | |
nusG | 734847 | c.594T>C | synonymous_variant | 0.29 | rifampicin | |
nusG | 734850 | c.597C>G | synonymous_variant | 0.25 | rifampicin | |
nusG | 734853 | c.600A>G | synonymous_variant | 0.26 | rifampicin | |
nusG | 734854 | c.601T>C | synonymous_variant | 0.26 | rifampicin | |
nusG | 734865 | c.612G>C | synonymous_variant | 0.24 | rifampicin | |
nusG | 734882 | p.Ala210Gly | missense_variant | 0.27 | rifampicin | |
rpoB | 760067 | c.261G>C | synonymous_variant | 0.27 | rifampicin | |
rpoB | 760070 | c.264T>G | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760091 | c.285G>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 760101 | c.295T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 760112 | c.306T>C | synonymous_variant | 0.59 | rifampicin | |
rpoB | 760118 | c.312T>C | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.6 | rifampicin | Uncertain significance |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.62 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.49 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 760256 | c.450C>T | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 760274 | c.468G>A | synonymous_variant | 0.49 | rifampicin | |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.52 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760337 | c.531C>G | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760340 | c.534G>C | synonymous_variant | 0.53 | rifampicin | |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.48 | rifampicin | |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.43 | rifampicin | Uncertain significance |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.42 | rifampicin | |
rpoB | 760403 | c.597C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760460 | c.654G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 760511 | c.705G>C | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760520 | c.714C>G | synonymous_variant | 0.38 | rifampicin | |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.36 | rifampicin | Uncertain significance |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.29 | rifampicin | |
rpoB | 760547 | c.741G>T | synonymous_variant | 0.35 | rifampicin | |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.36 | rifampicin | Uncertain significance |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.48 | rifampicin | |
rpoB | 760598 | c.792C>T | synonymous_variant | 0.47 | rifampicin | |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760674 | c.868T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 760679 | c.873A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 760751 | c.945G>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760755 | p.His317Asn | missense_variant | 0.39 | rifampicin | |
rpoB | 760765 | p.Glu320Ala | missense_variant | 0.42 | rifampicin | |
rpoB | 760769 | c.963C>G | synonymous_variant | 0.41 | rifampicin | |
rpoB | 760793 | c.987A>G | synonymous_variant | 0.37 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760817 | c.1011A>G | synonymous_variant | 0.36 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760845 | p.Thr347Ala | missense_variant | 0.44 | rifampicin | |
rpoB | 760856 | c.1050C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 760869 | p.Val355Thr | missense_variant | 0.36 | rifampicin | |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.43 | rifampicin | |
rpoB | 760919 | c.1113C>G | synonymous_variant | 0.41 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.41 | rifampicin | |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 760931 | c.1125C>G | synonymous_variant | 0.41 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.38 | rifampicin | |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.4 | rifampicin | |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327_1329delTTGinsCTC | synonymous_variant | 0.39 | rifampicin | |
rpoB | 761147 | c.1341C>T | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.43 | rifampicin | |
rpoB | 761234 | c.1428G>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 761264 | c.1458C>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 761318 | c.1512G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 761345 | c.1539G>C | synonymous_variant | 0.4 | rifampicin | |
rpoB | 761354 | c.1548C>T | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 761361 | c.1555_1556delAGinsTC | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761373 | p.Val523His | missense_variant | 0.27 | rifampicin | |
rpoB | 761408 | c.1602G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761504 | c.1698C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.3 | rifampicin | |
rpoB | 761531 | c.1725C>G | synonymous_variant | 0.38 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 761561 | c.1755C>G | synonymous_variant | 0.47 | rifampicin | |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 761603 | c.1797C>G | synonymous_variant | 0.5 | rifampicin | |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.49 | rifampicin | |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.38 | rifampicin | |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 761660 | c.1854G>A | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761669 | c.1863C>T | synonymous_variant | 0.34 | rifampicin | |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.27 | rifampicin | |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.26 | rifampicin | |
rpoB | 761867 | c.2061C>G | synonymous_variant | 0.3 | rifampicin | |
rpoB | 761870 | p.Asp688Glu | missense_variant | 0.3 | rifampicin | |
rpoB | 761873 | c.2067A>G | synonymous_variant | 0.31 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.36 | rifampicin | |
rpoB | 761891 | c.2085G>C | synonymous_variant | 0.38 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.37 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.36 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.36 | rifampicin | |
rpoB | 761921 | c.2115C>T | synonymous_variant | 0.37 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 761969 | c.2163G>A | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 761972 | c.2166C>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.41 | rifampicin | |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.45 | rifampicin | |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.49 | rifampicin | |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762074 | c.2268C>G | synonymous_variant | 0.51 | rifampicin | |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.47 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.41 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.47 | rifampicin | |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.55 | rifampicin | |
rpoB | 762284 | c.2478G>T | synonymous_variant | 0.52 | rifampicin | |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 762296 | c.2490G>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.5 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.53 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.53 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.52 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.49 | rifampicin | |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.47 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.5 | rifampicin | |
rpoB | 762416 | c.2610A>G | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.54 | rifampicin | |
rpoB | 762449 | c.2643C>A | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 762452 | c.2646G>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 762470 | c.2664G>C | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoC | 762476 | c.-894C>A | upstream_gene_variant | 0.54 | rifampicin | |
rpoB | 762489 | p.Val895Gln | missense_variant | 0.5 | rifampicin | |
rpoB | 762509 | p.Ala902Pro | missense_variant | 0.53 | rifampicin | Uncertain significance |
rpoC | 762512 | c.-858C>G | upstream_gene_variant | 0.5 | rifampicin | |
rpoC | 762533 | c.-837T>C | upstream_gene_variant | 0.48 | rifampicin | |
rpoC | 762536 | c.-834T>C | upstream_gene_variant | 0.4 | rifampicin | |
rpoC | 762537 | c.-833T>C | upstream_gene_variant | 0.4 | rifampicin | |
rpoC | 762545 | c.-825C>G | upstream_gene_variant | 0.42 | rifampicin | |
rpoC | 762551 | c.-819C>T | upstream_gene_variant | 0.36 | rifampicin | |
rpoC | 762581 | c.-789T>C | upstream_gene_variant | 0.21 | rifampicin | |
rpoC | 762582 | c.-788T>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoB | 762827 | c.3021G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 762833 | c.3027C>T | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 762857 | c.3051C>G | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoB | 762860 | c.3054G>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 762863 | c.-507T>G | upstream_gene_variant | 0.51 | rifampicin | |
rpoB | 762899 | c.3093G>C | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>T | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.58 | rifampicin | |
rpoB | 762962 | c.3156C>T | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.51 | rifampicin | |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.49 | rifampicin | |
rpoB | 762995 | c.3189G>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 763028 | c.3222T>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>C | synonymous_variant | 0.59 | rifampicin | Not assoc w R |
rpoB | 763031 | c.3225T>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763139 | c.-231C>T | upstream_gene_variant | 0.36 | rifampicin | |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.37 | rifampicin | |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 0.41 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 763202 | c.-168A>C | upstream_gene_variant | 0.35 | rifampicin | |
rpoC | 763205 | c.-165G>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 763206 | c.-164_-162delAGTinsTCG | upstream_gene_variant | 0.33 | rifampicin | |
rpoC | 763226 | c.-144A>G | upstream_gene_variant | 0.31 | rifampicin | |
rpoC | 763402 | c.33C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 763408 | c.39T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.43 | rifampicin | |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.55 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.53 | rifampicin | |
rpoC | 763501 | c.132C>T | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 763576 | c.207C>G | synonymous_variant | 0.51 | rifampicin | |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 763603 | c.234C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 763774 | c.405G>C | synonymous_variant | 0.22 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 0.19 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.23 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.24 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763900 | c.531G>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763930 | c.561G>A | synonymous_variant | 0.19 | rifampicin | |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.19 | rifampicin | |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 763960 | c.591T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 764011 | c.642T>C | synonymous_variant | 0.19 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764102 | p.Val245Ile | missense_variant | 0.35 | rifampicin | |
rpoC | 764112 | p.Tyr248Phe | missense_variant | 0.35 | rifampicin | |
rpoC | 764116 | c.747C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764134 | c.765C>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764198 | c.829C>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764203 | c.834G>T | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 764213 | p.Arg282Lys | missense_variant | 0.35 | rifampicin | Uncertain significance |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.44 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764287 | c.918C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 764293 | c.924G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764338 | c.969G>A | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 764383 | c.1014C>G | synonymous_variant | 0.49 | rifampicin | |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 764428 | c.1059G>A | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.36 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764500 | c.1131C>G | synonymous_variant | 0.52 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.59 | rifampicin | |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 764548 | c.1179G>A | synonymous_variant | 0.57 | rifampicin | |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.57 | rifampicin | |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>C | synonymous_variant | 0.54 | rifampicin | |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.55 | rifampicin | |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.51 | rifampicin | |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.46 | rifampicin | |
rpoC | 764626 | c.1257C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764668 | c.1299C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764932 | c.1563C>G | synonymous_variant | 0.48 | rifampicin | |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R |
rpoC | 765300 | p.Val644Ala | missense_variant | 0.28 | rifampicin | Uncertain significance |
rpoC | 765319 | c.1950A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 765326 | p.His653Ala | missense_variant | 0.26 | rifampicin | Uncertain significance |
rpoC | 765330 | p.Ser654Asn | missense_variant | 0.27 | rifampicin | Uncertain significance |
rpoC | 765370 | c.2001G>T | synonymous_variant | 0.28 | rifampicin | |
rpoC | 765371 | c.2002C>T | synonymous_variant | 0.27 | rifampicin | |
rpoC | 765379 | c.2010G>T | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.31 | rifampicin | Uncertain significance |
rpoC | 765394 | c.2025G>A | synonymous_variant | 0.36 | rifampicin | |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.31 | rifampicin | |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 765412 | c.2043T>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 765451 | c.2082C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 765454 | c.2085C>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 765469 | c.2100G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.5 | rifampicin | |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.52 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.55 | rifampicin | |
rpoC | 765562 | c.2193G>C | synonymous_variant | 0.6 | rifampicin | |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.54 | rifampicin | |
rpoC | 765583 | c.2214G>C | synonymous_variant | 0.55 | rifampicin | |
rpoC | 765613 | p.His748Gln | missense_variant | 0.57 | rifampicin | |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 765628 | c.2259G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.5 | rifampicin | |
rpoC | 765646 | c.2277G>A | synonymous_variant | 0.49 | rifampicin | |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.36 | rifampicin | |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.32 | rifampicin | Uncertain significance |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.39 | rifampicin | |
rpoC | 765778 | c.2409C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.32 | rifampicin | |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 765811 | c.2442T>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.35 | rifampicin | |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 765973 | c.2604C>G | synonymous_variant | 0.42 | rifampicin | |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.33 | rifampicin | |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 766061 | p.Val898Ile | missense_variant | 0.38 | rifampicin | |
rpoC | 766080 | c.2712_2715delTGCA | frameshift_variant | 0.4 | rifampicin | |
rpoC | 766096 | c.2727G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 766097 | p.Leu910Val | missense_variant | 0.37 | rifampicin | |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766135 | c.2766G>A | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 766141 | c.2772C>T | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766148 | p.Thr927Ala | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoC | 766294 | c.2925C>T | synonymous_variant | 0.19 | rifampicin | |
rpoC | 766303 | c.2934C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 766309 | c.2940G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 766312 | c.2943T>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766315 | c.2946C>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766321 | c.2952C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 766366 | c.2997C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 766369 | c.3000C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.34 | rifampicin | |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 766390 | c.3021C>T | synonymous_variant | 0.42 | rifampicin | |
rpoC | 766408 | c.3039C>T | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766462 | c.3093G>T | synonymous_variant | 0.44 | rifampicin | |
rpoC | 766483 | c.3114G>C | synonymous_variant | 0.48 | rifampicin | |
rpoC | 766484 | p.Val1039Ile | missense_variant | 0.48 | rifampicin | Uncertain significance |
rpoC | 766492 | c.3123T>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766522 | c.3153C>T | synonymous_variant | 0.5 | rifampicin | |
rpoC | 766531 | c.3162G>T | synonymous_variant | 0.47 | rifampicin | |
rpoC | 766543 | c.3174C>T | synonymous_variant | 0.45 | rifampicin | |
rpoC | 766549 | c.3180G>C | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.44 | rifampicin | |
rpoC | 766583 | p.Gly1072Ser | missense_variant | 0.38 | rifampicin | |
rpoC | 766588 | c.3219G>A | synonymous_variant | 0.37 | rifampicin | |
rpoC | 766591 | c.3222A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.4 | rifampicin | |
rpoC | 766618 | c.3249G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 766621 | c.3252G>A | synonymous_variant | 0.37 | rifampicin | |
rpoC | 766645 | c.3276A>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 766666 | c.3297C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.51 | rifampicin | |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.6 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.64 | rifampicin | |
rpoC | 766801 | c.3432C>T | synonymous_variant | 0.53 | rifampicin | |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 766843 | c.3474T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 766861 | c.3492G>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 766864 | c.3495G>C | synonymous_variant | 0.47 | rifampicin | |
rpoC | 766894 | c.3525T>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 766895 | c.3526T>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 766915 | p.Asp1182Glu | missense_variant | 0.31 | rifampicin | |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 766945 | c.3576A>G | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 766963 | c.3594T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 766972 | c.3603G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 766978 | c.3609C>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 767002 | c.3633G>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 767033 | c.3664_3666delTCGinsAGC | synonymous_variant | 0.42 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>T | synonymous_variant | 0.43 | rifampicin | |
rpoC | 767065 | c.3696G>A | synonymous_variant | 0.47 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 767102 | c.3733_3735delCTCinsTTG | synonymous_variant | 0.44 | rifampicin | |
rpoC | 767105 | p.Asn1246Gln | missense_variant | 0.44 | rifampicin | Uncertain significance |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>A | synonymous_variant | 0.45 | rifampicin | |
rpoC | 767167 | c.3798C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.26 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 767230 | c.3861G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 767233 | c.3864T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
mmpL5 | 775883 | p.Ile866Leu | missense_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775886 | c.2595A>C | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775909 | p.Leu858Phe | missense_variant | 0.38 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775913 | c.2568C>G | synonymous_variant | 0.37 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775916 | c.2565T>G | synonymous_variant | 0.36 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775966 | p.Ala839Ser | missense_variant | 0.3 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775975 | c.2506T>C | synonymous_variant | 0.29 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775981 | p.Leu834Met | missense_variant | 0.3 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
mmpL5 | 776182 | p.Asp767Asn | missense_variant | 1.0 | bedaquiline | Not assoc w R |
clofazimine | Not assoc w R | |||||
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 1.0 | bedaquiline | |
clofazimine | ||||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781571 | c.12C>T | synonymous_variant | 0.31 | streptomycin | |
rpsL | 781595 | c.36T>C | synonymous_variant | 0.35 | streptomycin | |
rpsL | 781598 | c.39G>C | synonymous_variant | 0.32 | streptomycin | |
rpsL | 781605 | p.Ile16Val | missense_variant | 0.35 | streptomycin | Uncertain significance |
rpsL | 781608 | p.Ser17Ala | missense_variant | 0.32 | streptomycin | |
rpsL | 781628 | c.69T>C | synonymous_variant | 0.36 | streptomycin | Not assoc w R - Interim |
rpsL | 781649 | c.90T>C | synonymous_variant | 0.45 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.38 | streptomycin | |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.44 | streptomycin | |
rpsL | 781718 | c.159C>T | synonymous_variant | 0.47 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.48 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.49 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.5 | streptomycin | |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.48 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.47 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.35 | streptomycin | |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.31 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.48 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.59 | streptomycin | Uncertain significance |
rplC | 800516 | c.-293G>T | upstream_gene_variant | 0.41 | linezolid | |
rplC | 800537 | c.-272C>T | upstream_gene_variant | 0.52 | linezolid | |
rplC | 800546 | c.-263T>G | upstream_gene_variant | 0.54 | linezolid | |
rplC | 800567 | c.-242A>G | upstream_gene_variant | 0.57 | linezolid | |
rplC | 800582 | c.-227C>G | upstream_gene_variant | 0.49 | linezolid | |
rplC | 800591 | c.-218C>T | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800600 | c.-209G>T | upstream_gene_variant | 0.5 | linezolid | |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.5 | linezolid | |
rplC | 800703 | c.-106_-104delTTGinsCTC | upstream_gene_variant | 0.54 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.55 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.52 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.5 | linezolid | |
rplC | 800738 | c.-71T>C | upstream_gene_variant | 0.48 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.45 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.35 | linezolid | |
rplC | 801147 | c.339T>C | synonymous_variant | 0.19 | linezolid | |
rplC | 801150 | c.342G>C | synonymous_variant | 0.18 | linezolid | |
rplC | 801156 | c.348T>C | synonymous_variant | 0.18 | linezolid | |
rplC | 801171 | c.363A>G | synonymous_variant | 0.26 | linezolid | |
rplC | 801174 | c.366T>C | synonymous_variant | 0.26 | linezolid | |
rplC | 801195 | c.387G>C | synonymous_variant | 0.26 | linezolid | |
rplC | 801222 | c.414T>C | synonymous_variant | 0.31 | linezolid | |
rplC | 801249 | c.441T>C | synonymous_variant | 0.22 | linezolid | |
rplC | 801255 | c.447C>T | synonymous_variant | 0.24 | linezolid | |
rplC | 801267 | c.459A>T | synonymous_variant | 0.21 | linezolid | |
rplC | 801270 | c.462T>C | synonymous_variant | 0.19 | linezolid | |
Rv1129c | 1254562 | c.-28T>C | upstream_gene_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
fbiC | 1303488 | c.558G>C | synonymous_variant | 0.26 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303492 | c.562T>C | synonymous_variant | 0.25 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303509 | c.579G>C | synonymous_variant | 0.25 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303512 | c.582T>C | synonymous_variant | 0.24 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303534 | p.Ser202Ala | missense_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303545 | c.615A>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303575 | c.645G>C | synonymous_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303581 | c.651G>C | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303584 | c.654C>G | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303590 | c.660A>T | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303602 | c.672A>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303605 | c.675C>G | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303608 | c.678G>A | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303614 | c.684C>T | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303617 | c.687C>G | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303632 | c.702T>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303728 | c.798G>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303731 | c.801A>C | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303732 | p.Ser268Thr | missense_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303737 | c.807G>A | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303746 | c.816T>C | synonymous_variant | 0.26 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303749 | c.819G>C | synonymous_variant | 0.24 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303752 | c.822A>G | synonymous_variant | 0.24 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1303755 | c.825T>C | synonymous_variant | 0.24 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303785 | c.855G>T | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303794 | c.864A>G | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303818 | c.888C>G | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303846 | p.Phe306Val | missense_variant | 0.39 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303854 | c.924T>C | synonymous_variant | 0.4 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303860 | c.930A>C | synonymous_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.43 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303890 | c.960G>C | synonymous_variant | 0.4 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303897 | c.967C>T | synonymous_variant | 0.36 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1303905 | c.975G>C | synonymous_variant | 0.37 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303908 | c.978C>A | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303914 | c.984C>G | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303923 | c.993C>T | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303932 | c.1002G>C | synonymous_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303935 | c.1005G>C | synonymous_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303947 | c.1017T>G | synonymous_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303948 | p.Gly340Arg | missense_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303956 | c.1026A>G | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303961 | p.Arg344Leu | missense_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304137 | p.Ala403Ser | missense_variant | 0.24 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304559 | p.Glu543Asp | missense_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304568 | c.1638T>C | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304574 | c.1644C>G | synonymous_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304580 | c.1650T>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304613 | c.1683T>G | synonymous_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304625 | c.1695C>T | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304634 | c.1704C>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304640 | c.1710A>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304646 | c.1716T>C | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304658 | c.1728C>G | synonymous_variant | 0.25 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304670 | c.1740G>C | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304742 | c.1812T>C | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304748 | c.1818T>C | synonymous_variant | 0.28 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304757 | c.1827A>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304778 | c.1848T>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304784 | c.1854T>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304787 | c.1857T>G | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304790 | c.1860C>G | synonymous_variant | 0.31 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304796 | c.1866G>A | synonymous_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304808 | c.1878C>G | synonymous_variant | 0.26 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304811 | c.1881C>G | synonymous_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304817 | c.1887T>C | synonymous_variant | 0.26 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304880 | c.1950C>T | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304893 | p.Gly655Ser | missense_variant | 0.27 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304907 | c.1977C>G | synonymous_variant | 0.27 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304910 | c.1980G>C | synonymous_variant | 0.26 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304916 | c.1986T>C | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304925 | c.1995G>C | synonymous_variant | 0.29 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304955 | c.2025G>A | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304958 | c.2028T>G | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304994 | c.2064A>G | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304995 | c.2065T>C | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305012 | c.2082G>C | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305014 | p.Thr695Ser | missense_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305021 | c.2091C>A | synonymous_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305033 | c.2103T>G | synonymous_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305039 | c.2109G>C | synonymous_variant | 0.37 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305042 | c.2112A>G | synonymous_variant | 0.35 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305045 | c.2115A>G | synonymous_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305066 | c.2136T>C | synonymous_variant | 0.4 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305069 | c.2139G>C | synonymous_variant | 0.39 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305075 | c.2145T>C | synonymous_variant | 0.4 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305078 | c.2148A>G | synonymous_variant | 0.39 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305090 | c.2160C>G | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305092 | p.Ala721Gly | missense_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305096 | c.2166T>C | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305099 | c.2169T>C | synonymous_variant | 0.34 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305114 | c.2184T>C | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305117 | c.2187T>C | synonymous_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305126 | c.2196T>C | synonymous_variant | 0.3 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1305135 | c.2205C>T | synonymous_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305144 | c.2214G>A | synonymous_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305273 | c.2343C>T | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305276 | c.2346G>C | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305279 | p.His783Gln | missense_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305282 | c.2352T>C | synonymous_variant | 0.18 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305361 | c.2431C>T | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305396 | c.2466C>G | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305400 | p.His824Tyr | missense_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305405 | c.2475A>T | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1305430 | p.Val834Ile | missense_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
sigE | 1365108 | c.696A>C | synonymous_variant | 0.27 | pyrazinamide | |
Rv1258c | 1406760 | c.580_581insC | frameshift_variant | 1.0 | streptomycin | Uncertain significance |
pyrazinamide | Uncertain significance | |||||
isoniazid | Uncertain significance | |||||
embR | 1416310 | c.1038G>C | synonymous_variant | 0.22 | ethambutol | |
embR | 1416313 | c.1035A>G | synonymous_variant | 0.21 | ethambutol | |
embR | 1416316 | c.1032C>A | synonymous_variant | 0.23 | ethambutol | |
embR | 1416324 | p.Asn342Asp | missense_variant | 0.22 | ethambutol | |
embR | 1416330 | p.Val340Ile | missense_variant | 0.24 | ethambutol | |
embR | 1416335 | p.Asn338Gly | missense_variant | 0.24 | ethambutol | |
embR | 1416340 | c.1008C>G | synonymous_variant | 0.24 | ethambutol | |
embR | 1416343 | c.1005G>C | synonymous_variant | 0.24 | ethambutol | |
embR | 1416354 | p.Ile332Val | missense_variant | 0.22 | ethambutol | |
atpE | 1460804 | c.-241T>C | upstream_gene_variant | 0.43 | bedaquiline | |
atpE | 1460816 | c.-229T>C | upstream_gene_variant | 0.58 | bedaquiline | |
atpE | 1460831 | c.-214T>C | upstream_gene_variant | 0.62 | bedaquiline | |
atpE | 1460852 | c.-193C>G | upstream_gene_variant | 0.56 | bedaquiline | |
atpE | 1460855 | c.-190T>C | upstream_gene_variant | 0.54 | bedaquiline | |
atpE | 1460858 | c.-187C>G | upstream_gene_variant | 0.57 | bedaquiline | |
atpE | 1460861 | c.-184C>G | upstream_gene_variant | 0.54 | bedaquiline | |
atpE | 1461132 | p.Val30Ile | missense_variant | 0.2 | bedaquiline | |
atpE | 1461149 | c.105T>G | synonymous_variant | 0.25 | bedaquiline | |
atpE | 1461150 | p.Ile36Val | missense_variant | 0.25 | bedaquiline | |
atpE | 1461158 | c.114T>C | synonymous_variant | 0.3 | bedaquiline | |
atpE | 1461159 | p.Val39Ile | missense_variant | 0.32 | bedaquiline | Uncertain significance |
atpE | 1461170 | c.126A>G | synonymous_variant | 0.32 | bedaquiline | |
atpE | 1461185 | c.141G>C | synonymous_variant | 0.31 | bedaquiline | |
atpE | 1461189 | c.145C>T | synonymous_variant | 0.3 | bedaquiline | |
atpE | 1461194 | c.150C>T | synonymous_variant | 0.29 | bedaquiline | |
atpE | 1461197 | c.153A>G | synonymous_variant | 0.36 | bedaquiline | |
atpE | 1461219 | c.175T>C | synonymous_variant | 0.33 | bedaquiline | |
atpE | 1461233 | c.189A>C | synonymous_variant | 0.24 | bedaquiline | |
atpE | 1461251 | c.207G>C | synonymous_variant | 0.22 | bedaquiline | |
atpE | 1461254 | c.210T>C | synonymous_variant | 0.18 | bedaquiline | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1471923 | n.78T>C | non_coding_transcript_exon_variant | 0.38 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 0.48 | kanamycin | |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471969 | n.124T>C | non_coding_transcript_exon_variant | 0.28 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1471970 | n.125G>A | non_coding_transcript_exon_variant | 0.29 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472028 | n.183A>T | non_coding_transcript_exon_variant | 0.27 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472029 | n.184C>T | non_coding_transcript_exon_variant | 0.27 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472030 | n.185G>T | non_coding_transcript_exon_variant | 0.28 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472031 | n.186G>A | non_coding_transcript_exon_variant | 0.28 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472034 | n.189T>C | non_coding_transcript_exon_variant | 0.26 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472044 | n.199G>T | non_coding_transcript_exon_variant | 0.24 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.25 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.29 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.31 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.31 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.42 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.42 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.4 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.4 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.46 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTT | non_coding_transcript_exon_variant | 0.56 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.49 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.48 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473288 | n.1443C>T | non_coding_transcript_exon_variant | 0.54 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.5 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.52 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrl | 1473668 | n.11C>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473756 | n.99G>A | non_coding_transcript_exon_variant | 0.48 | capreomycin | |
linezolid | ||||||
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.52 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 0.51 | capreomycin | |
linezolid | ||||||
rrl | 1473839 | n.182G>T | non_coding_transcript_exon_variant | 0.5 | capreomycin | |
linezolid | ||||||
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473899 | n.242A>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473936 | n.279A>G | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473944 | n.287G>A | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1473966 | n.309T>C | non_coding_transcript_exon_variant | 0.36 | capreomycin | |
linezolid | ||||||
rrl | 1473971 | n.314G>T | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1473981 | n.324delGinsTT | non_coding_transcript_exon_variant | 0.36 | capreomycin | |
linezolid | ||||||
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Not assoc w R |
linezolid | Not assoc w R | |||||
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1474012 | n.355C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1474036 | n.379G>A | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
rrl | 1474054 | n.397T>C | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474093 | n.436G>T | non_coding_transcript_exon_variant | 0.48 | capreomycin | |
linezolid | ||||||
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.57 | capreomycin | |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.57 | capreomycin | |
linezolid | ||||||
rrl | 1474111 | n.454T>C | non_coding_transcript_exon_variant | 0.58 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.71 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.7 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.62 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474282 | n.625G>A | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474288 | n.632_634delCTT | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1474294 | n.638_649delCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.47 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.5 | capreomycin | |
linezolid | ||||||
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474823 | n.1166C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474904 | n.1247G>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1475013 | n.1356G>A | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 0.45 | capreomycin | |
linezolid | ||||||
rrl | 1475201 | n.1544G>A | non_coding_transcript_exon_variant | 0.45 | capreomycin | |
linezolid | ||||||
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.48 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.42 | capreomycin | |
linezolid | ||||||
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475267 | n.1610G>A | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475369 | n.1712G>C | non_coding_transcript_exon_variant | 0.53 | capreomycin | |
linezolid | ||||||
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1475409 | n.1752T>C | non_coding_transcript_exon_variant | 0.42 | capreomycin | |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.48 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.46 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.42 | capreomycin | |
linezolid | ||||||
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 0.44 | capreomycin | |
linezolid | ||||||
rrl | 1475761 | n.2104_2106delCGCinsGT | non_coding_transcript_exon_variant | 0.32 | capreomycin | |
linezolid | ||||||
rrl | 1475765 | n.2111delG | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.46 | capreomycin | |
linezolid | ||||||
rrl | 1476105 | n.2448_2449delGAinsT | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.59 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.59 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.67 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.74 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476689 | n.3032A>T | non_coding_transcript_exon_variant | 0.48 | capreomycin | |
linezolid | ||||||
rrl | 1476690 | n.3033C>T | non_coding_transcript_exon_variant | 0.48 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476693 | n.3036G>A | non_coding_transcript_exon_variant | 0.48 | capreomycin | |
linezolid | ||||||
rrl | 1476695 | n.3038T>A | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476716 | n.3059A>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476717 | n.3060C>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476726 | n.3069A>G | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476732 | n.3075T>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1476746 | n.3089T>C | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476759 | n.3102T>C | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1476770 | n.3113T>C | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1476771 | n.3114G>A | non_coding_transcript_exon_variant | 0.26 | capreomycin | |
linezolid | ||||||
inhA | 1674078 | c.-124C>G | upstream_gene_variant | 0.26 | isoniazid | |
ethionamide | ||||||
inhA | 1674079 | c.-123C>G | upstream_gene_variant | 0.26 | isoniazid | |
ethionamide | ||||||
inhA | 1674084 | c.-118C>G | upstream_gene_variant | 0.27 | isoniazid | |
ethionamide | ||||||
inhA | 1674114 | c.-88T>G | upstream_gene_variant | 0.27 | isoniazid | |
ethionamide | ||||||
inhA | 1674123 | c.-79T>C | upstream_gene_variant | 0.27 | isoniazid | |
ethionamide | ||||||
inhA | 1674129 | c.-73C>T | upstream_gene_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674132 | c.-70T>C | upstream_gene_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674136 | c.-66T>G | upstream_gene_variant | 0.2 | isoniazid | |
ethionamide | ||||||
inhA | 1674141 | c.-61T>C | upstream_gene_variant | 0.19 | isoniazid | |
ethionamide | ||||||
inhA | 1674255 | c.54C>T | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
inhA | 1674489 | c.288G>T | synonymous_variant | 0.17 | isoniazid | |
ethionamide | ||||||
inhA | 1674537 | c.336C>G | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674540 | c.339C>T | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674542 | p.Ala114Glu | missense_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674549 | c.348G>C | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674550 | p.Ser117Ala | missense_variant | 0.37 | isoniazid | |
ethionamide | ||||||
inhA | 1674555 | c.354G>A | synonymous_variant | 0.39 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
inhA | 1674561 | c.360C>T | synonymous_variant | 0.41 | isoniazid | |
ethionamide | ||||||
inhA | 1674582 | c.381T>C | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674585 | c.384T>C | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674589 | p.Met130Leu | missense_variant | 0.37 | isoniazid | |
ethionamide | ||||||
inhA | 1674601 | p.Leu134Thr | missense_variant | 0.35 | isoniazid | |
ethionamide | ||||||
inhA | 1674624 | c.423A>T | synonymous_variant | 0.34 | isoniazid | |
ethionamide | ||||||
inhA | 1674627 | c.426T>C | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674636 | c.435C>G | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674690 | c.489C>G | synonymous_variant | 0.43 | isoniazid | |
ethionamide | ||||||
inhA | 1674703 | c.502T>C | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674708 | c.507G>A | synonymous_variant | 0.42 | isoniazid | |
ethionamide | ||||||
inhA | 1674714 | c.513C>G | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674718 | c.517A>C | synonymous_variant | 0.32 | isoniazid | |
ethionamide | ||||||
inhA | 1674729 | c.528G>T | synonymous_variant | 0.27 | isoniazid | |
ethionamide | ||||||
inhA | 1674738 | c.537C>G | synonymous_variant | 0.32 | isoniazid | |
ethionamide | ||||||
inhA | 1674746 | p.Tyr182Phe | missense_variant | 0.31 | isoniazid | |
ethionamide | ||||||
inhA | 1674756 | c.555T>A | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674840 | c.639C>G | synonymous_variant | 0.2 | isoniazid | |
ethionamide | ||||||
inhA | 1674846 | p.Ile215Met | missense_variant | 0.22 | isoniazid | |
ethionamide | ||||||
inhA | 1674858 | c.657G>A | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
inhA | 1674870 | c.669T>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
inhA | 1674879 | c.678T>C | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674903 | c.702T>C | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
inhA | 1674904 | p.Ala235Pro | missense_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674934 | c.733C>T | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
inhA | 1674939 | c.738G>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
inhA | 1674942 | c.741T>G | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674954 | c.753G>T | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
rpsA | 1833554 | p.Thr5Ala | missense_variant | 0.3 | pyrazinamide | Uncertain significance |
rpsA | 1833589 | c.48A>T | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833595 | c.54T>G | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.33 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.35 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1833835 | c.294C>T | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.5 | pyrazinamide | |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.46 | pyrazinamide | |
rpsA | 1834097 | c.556_557delTCinsAG | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834102 | c.561T>G | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.19 | pyrazinamide | Uncertain significance |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834186 | c.645C>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834192 | c.651C>G | synonymous_variant | 0.32 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.42 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.42 | pyrazinamide | |
rpsA | 1834294 | c.753G>T | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834297 | c.756C>T | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.38 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.34 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834369 | c.828C>G | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.41 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.47 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.5 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.47 | pyrazinamide | |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834477 | c.936C>T | synonymous_variant | 0.48 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.51 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.47 | pyrazinamide | |
rpsA | 1834540 | c.999G>T | synonymous_variant | 0.44 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.5 | pyrazinamide | |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 0.51 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.53 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.54 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.52 | pyrazinamide | |
rpsA | 1834654 | p.Glu371Asp | missense_variant | 0.5 | pyrazinamide | |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834738 | c.1197A>G | synonymous_variant | 0.38 | pyrazinamide | |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834759 | c.1218A>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834765 | p.Glu408Asp | missense_variant | 0.35 | pyrazinamide | |
rpsA | 1834775 | p.Ala412Asn | missense_variant | 0.34 | pyrazinamide | |
rpsA | 1834780 | c.1239A>G | synonymous_variant | 0.34 | pyrazinamide | |
rpsA | 1834789 | c.1248T>C | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1834792 | c.1251G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834828 | c.1287C>G | synonymous_variant | 0.29 | pyrazinamide | |
tsnR | 1853361 | c.-245T>C | upstream_gene_variant | 0.24 | linezolid | |
tsnR | 1853370 | c.-236_-234delGCAinsTCG | upstream_gene_variant | 0.27 | linezolid | |
tsnR | 1853375 | c.-231G>T | upstream_gene_variant | 0.29 | linezolid | |
tsnR | 1853387 | c.-219T>G | upstream_gene_variant | 0.3 | linezolid | |
tsnR | 1853390 | c.-216G>A | upstream_gene_variant | 0.3 | linezolid | |
tsnR | 1853394 | c.-212_-211delCTinsGC | upstream_gene_variant | 0.32 | linezolid | |
tsnR | 1853420 | c.-186T>G | upstream_gene_variant | 0.36 | linezolid | |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1917945 | c.6A>T | synonymous_variant | 0.16 | capreomycin | |
tlyA | 1917951 | c.12T>C | synonymous_variant | 0.21 | capreomycin | |
tlyA | 1917981 | c.42G>C | synonymous_variant | 0.23 | capreomycin | |
ndh | 2101960 | c.1083A>G | synonymous_variant | 0.33 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102260 | c.783C>T | synonymous_variant | 0.37 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102266 | c.777C>G | synonymous_variant | 0.34 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102317 | c.726A>G | synonymous_variant | 0.26 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102328 | p.Leu239Met | missense_variant | 0.28 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102334 | p.Gln237Glu | missense_variant | 0.28 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102337 | c.706T>C | synonymous_variant | 0.29 | isoniazid | |
delamanid | ||||||
ethionamide | Not assoc w R - Interim | |||||
ndh | 2102644 | c.399A>G | synonymous_variant | 0.31 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102671 | c.372T>G | synonymous_variant | 0.41 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102680 | c.363T>G | synonymous_variant | 0.41 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102683 | c.360T>C | synonymous_variant | 0.39 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102686 | c.357G>C | synonymous_variant | 0.38 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102694 | p.Val117Ile | missense_variant | 0.38 | isoniazid | Uncertain significance |
delamanid | Uncertain significance | |||||
ethionamide | Uncertain significance | |||||
ndh | 2102701 | c.342C>T | synonymous_variant | 0.38 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102710 | c.333C>T | synonymous_variant | 0.32 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2102716 | p.Gln109Asp | missense_variant | 0.28 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
katG | 2154724 | p.Arg463Leu | missense_variant | 0.96 | isoniazid | Not assoc w R |
katG | 2155596 | c.516G>C | synonymous_variant | 0.24 | isoniazid | |
katG | 2155620 | c.492G>C | synonymous_variant | 0.24 | isoniazid | |
katG | 2155632 | c.480A>C | synonymous_variant | 0.38 | isoniazid | |
katG | 2155637 | p.Leu159Ile | missense_variant | 0.38 | isoniazid | |
katG | 2155641 | p.Lys157Asn | missense_variant | 0.39 | isoniazid | Uncertain significance |
katG | 2155680 | c.432G>C | synonymous_variant | 0.34 | isoniazid | |
katG | 2155691 | c.421T>C | synonymous_variant | 0.34 | isoniazid | |
katG | 2155692 | c.420C>T | synonymous_variant | 0.34 | isoniazid | |
katG | 2155695 | p.Ala139Val | missense_variant | 0.33 | isoniazid | |
katG | 2155704 | c.408C>G | synonymous_variant | 0.34 | isoniazid | |
katG | 2155716 | c.396T>C | synonymous_variant | 0.36 | isoniazid | |
katG | 2155722 | c.390G>C | synonymous_variant | 0.32 | isoniazid | |
katG | 2155728 | c.384G>C | synonymous_variant | 0.28 | isoniazid | |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 | pyrazinamide | Not assoc w R |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
kasA | 2517917 | c.-198G>T | upstream_gene_variant | 0.22 | isoniazid | |
kasA | 2517926 | c.-189G>A | upstream_gene_variant | 0.28 | isoniazid | |
kasA | 2518183 | c.69G>A | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518190 | p.Ser26Ala | missense_variant | 0.35 | isoniazid | |
kasA | 2518220 | c.106C>T | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518234 | c.120G>A | synonymous_variant | 0.3 | isoniazid | |
kasA | 2518504 | c.390T>C | synonymous_variant | 0.18 | isoniazid | |
kasA | 2518506 | p.Ala131Glu | missense_variant | 0.2 | isoniazid | |
kasA | 2518519 | c.405G>C | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518528 | c.414C>G | synonymous_variant | 0.26 | isoniazid | |
kasA | 2518534 | c.420G>C | synonymous_variant | 0.25 | isoniazid | |
kasA | 2518561 | c.447T>C | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518574 | p.Ile154Val | missense_variant | 0.32 | isoniazid | |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518591 | c.477G>T | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518597 | c.483C>G | synonymous_variant | 0.34 | isoniazid | |
kasA | 2518606 | c.492G>C | synonymous_variant | 0.29 | isoniazid | |
kasA | 2518609 | p.Met165Ile | missense_variant | 0.27 | isoniazid | |
kasA | 2518621 | c.507G>T | synonymous_variant | 0.25 | isoniazid | |
kasA | 2518627 | c.513T>C | synonymous_variant | 0.27 | isoniazid | |
kasA | 2518636 | c.522C>T | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518642 | c.528A>G | synonymous_variant | 0.36 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518678 | c.564C>T | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518684 | c.570C>G | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518688 | p.Val192Phe | missense_variant | 0.33 | isoniazid | |
kasA | 2518696 | c.582C>T | synonymous_variant | 0.3 | isoniazid | |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.29 | isoniazid | |
kasA | 2518705 | c.591T>G | synonymous_variant | 0.3 | isoniazid | |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518714 | c.600A>T | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518723 | c.609G>A | synonymous_variant | 0.28 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.17 | isoniazid | |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.26 | isoniazid | |
kasA | 2518834 | c.720C>T | synonymous_variant | 0.24 | isoniazid | |
ahpC | 2726612 | c.420C>G | synonymous_variant | 0.29 | isoniazid | |
ahpC | 2726633 | c.441C>G | synonymous_variant | 0.36 | isoniazid | |
ahpC | 2726638 | p.Ala149Val | missense_variant | 0.38 | isoniazid | |
ahpC | 2726645 | c.453C>G | synonymous_variant | 0.45 | isoniazid | |
ahpC | 2726651 | c.459G>C | synonymous_variant | 0.45 | isoniazid | |
ahpC | 2726657 | c.465A>C | synonymous_variant | 0.42 | isoniazid | Not assoc w R - Interim |
ahpC | 2726669 | p.Asp159Glu | missense_variant | 0.45 | isoniazid | |
ahpC | 2726675 | c.483A>G | synonymous_variant | 0.42 | isoniazid | |
ahpC | 2726681 | c.489A>C | synonymous_variant | 0.39 | isoniazid | Not assoc w R - Interim |
ahpC | 2726684 | c.492G>C | synonymous_variant | 0.38 | isoniazid | |
ahpC | 2726687 | c.495C>G | synonymous_variant | 0.37 | isoniazid | |
ahpC | 2726693 | c.501C>A | synonymous_variant | 0.37 | isoniazid | |
ahpC | 2726696 | c.504C>G | synonymous_variant | 0.38 | isoniazid | |
folC | 2746282 | c.1317T>C | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
folC | 2746285 | c.1314T>C | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
folC | 2746308 | p.Arg431Ser | missense_variant | 0.23 | para-aminosalicylic_acid | |
folC | 2746321 | c.1278A>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
folC | 2746618 | c.981G>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
folC | 2746631 | p.Gly323Val | missense_variant | 0.21 | para-aminosalicylic_acid | |
folC | 2747059 | c.540T>C | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
folC | 2747086 | c.513A>C | synonymous_variant | 0.37 | para-aminosalicylic_acid | |
folC | 2747089 | c.510G>C | synonymous_variant | 0.37 | para-aminosalicylic_acid | |
folC | 2747101 | c.498G>C | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747107 | c.492G>C | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747110 | c.489T>C | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747113 | c.486C>G | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747116 | c.483G>C | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747131 | c.468C>G | synonymous_variant | 0.31 | para-aminosalicylic_acid | |
folC | 2747134 | c.465C>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
folC | 2747314 | c.285A>T | synonymous_variant | 0.47 | para-aminosalicylic_acid | |
folC | 2747317 | c.282C>G | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
folC | 2747343 | p.Val86Ile | missense_variant | 0.34 | para-aminosalicylic_acid | |
folC | 2747355 | p.Val82Ile | missense_variant | 0.31 | para-aminosalicylic_acid | |
folC | 2747359 | c.240C>G | synonymous_variant | 0.32 | para-aminosalicylic_acid | |
folC | 2747394 | p.Ile69Val | missense_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747395 | c.204T>C | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
folC | 2747407 | c.192T>C | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
folC | 2747408 | c.190_191insGGCCT | frameshift_variant | 0.21 | para-aminosalicylic_acid | |
folC | 2747414 | c.180_184delCCAAC | frameshift_variant | 0.24 | para-aminosalicylic_acid | |
folC | 2747442 | c.157T>C | synonymous_variant | 0.37 | para-aminosalicylic_acid | |
folC | 2747467 | p.Asp44Glu | missense_variant | 0.22 | para-aminosalicylic_acid | |
Rv2477c | 2782453 | c.1590C>T | synonymous_variant | 0.28 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782483 | c.1560G>C | synonymous_variant | 0.33 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782510 | c.1533G>C | synonymous_variant | 0.43 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782528 | c.1515G>C | synonymous_variant | 0.39 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782669 | c.1374A>G | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782680 | c.1363T>C | synonymous_variant | 0.28 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782684 | c.1359T>C | synonymous_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782705 | c.1338G>C | synonymous_variant | 0.4 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782708 | c.1335C>T | synonymous_variant | 0.41 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782714 | c.1329A>C | synonymous_variant | 0.38 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782720 | c.1323T>A | synonymous_variant | 0.37 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782729 | c.1314A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782732 | c.1311A>G | synonymous_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782738 | c.1305C>T | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782750 | c.1293T>C | synonymous_variant | 0.27 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782759 | c.1284A>G | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782957 | c.1086A>G | synonymous_variant | 0.38 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782969 | c.1074A>C | synonymous_variant | 0.47 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782981 | c.1062G>C | synonymous_variant | 0.46 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782984 | c.1059T>C | synonymous_variant | 0.46 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783002 | c.1041T>C | synonymous_variant | 0.47 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783008 | c.1035C>G | synonymous_variant | 0.48 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783013 | c.1030T>C | synonymous_variant | 0.47 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783015 | p.Ser343Thr | missense_variant | 0.49 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783020 | c.1023G>C | synonymous_variant | 0.5 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783040 | p.Ala335Thr | missense_variant | 0.42 | kanamycin | Uncertain significance |
levofloxacin | Uncertain significance | |||||
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
ethambutol | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2783044 | c.999G>C | synonymous_variant | 0.47 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783051 | p.Tyr331Phe | missense_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783059 | c.984T>C | synonymous_variant | 0.54 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783065 | c.978C>T | synonymous_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783068 | p.Asp325Glu | missense_variant | 0.46 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783077 | c.966T>C | synonymous_variant | 0.4 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783086 | c.957C>T | synonymous_variant | 0.45 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783092 | c.951A>G | synonymous_variant | 0.46 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783095 | c.948C>G | synonymous_variant | 0.46 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783116 | c.927T>C | synonymous_variant | 0.48 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783140 | c.903C>G | synonymous_variant | 0.56 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783149 | c.894G>C | synonymous_variant | 0.46 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | ||||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783158 | c.885A>C | synonymous_variant | 0.45 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783182 | c.861C>G | synonymous_variant | 0.45 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783193 | p.Ser284Gly | missense_variant | 0.39 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783194 | c.849A>G | synonymous_variant | 0.37 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783203 | c.840C>T | synonymous_variant | 0.4 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783221 | c.822G>C | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783224 | c.819C>G | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783230 | c.813T>C | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783235 | c.808T>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783244 | p.Thr267Ala | missense_variant | 0.34 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783254 | c.789A>G | synonymous_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783263 | c.780G>C | synonymous_variant | 0.36 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783278 | c.765A>G | synonymous_variant | 0.43 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783289 | p.Leu252Ile | missense_variant | 0.42 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783299 | c.744A>G | synonymous_variant | 0.41 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783302 | c.741A>G | synonymous_variant | 0.41 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783305 | c.738G>A | synonymous_variant | 0.43 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783311 | c.732T>C | synonymous_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783332 | c.711T>C | synonymous_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783335 | c.708C>G | synonymous_variant | 0.44 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783350 | c.693T>C | synonymous_variant | 0.42 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783353 | c.690T>C | synonymous_variant | 0.4 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783356 | c.687C>G | synonymous_variant | 0.4 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783359 | c.684G>A | synonymous_variant | 0.39 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783374 | c.669G>C | synonymous_variant | 0.33 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783572 | c.471A>G | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783586 | p.Ala153Pro | missense_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783593 | c.450T>C | synonymous_variant | 0.38 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783605 | c.438T>C | synonymous_variant | 0.37 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783620 | c.423C>G | synonymous_variant | 0.43 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783626 | p.Ala139Ser | missense_variant | 0.38 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783629 | c.414C>T | synonymous_variant | 0.34 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783665 | c.378A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783674 | c.369T>A | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783680 | c.363G>A | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783683 | c.360A>G | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783691 | c.352C>T | synonymous_variant | 0.24 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783695 | c.348C>T | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783700 | p.Thr115Ser | missense_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783887 | c.156C>G | synonymous_variant | 0.44 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783914 | c.129T>C | synonymous_variant | 0.65 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783920 | c.123G>C | synonymous_variant | 0.62 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783950 | c.93C>T | synonymous_variant | 0.53 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783953 | c.90G>A | synonymous_variant | 0.56 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783962 | c.81T>C | synonymous_variant | 0.56 | kanamycin | Not assoc w R - Interim |
levofloxacin | ||||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783971 | c.72G>C | synonymous_variant | 0.53 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783980 | c.63C>G | synonymous_variant | 0.46 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783992 | c.51T>C | synonymous_variant | 0.41 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2784016 | c.27G>A | synonymous_variant | 0.33 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
pepQ | 2859843 | c.576G>C | synonymous_variant | 0.33 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859870 | c.549T>C | synonymous_variant | 0.38 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859873 | c.546T>C | synonymous_variant | 0.38 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859882 | c.537G>C | synonymous_variant | 0.34 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859903 | c.516G>C | synonymous_variant | 0.31 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859908 | p.Gln171Glu | missense_variant | 0.28 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859909 | c.510G>C | synonymous_variant | 0.28 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859918 | c.501A>G | synonymous_variant | 0.23 | bedaquiline | |
clofazimine | ||||||
pepQ | 2859921 | c.498C>G | synonymous_variant | 0.24 | bedaquiline | |
clofazimine | ||||||
Rv2752c | 3065463 | c.729T>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065675 | p.Phe173Leu | missense_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065697 | c.495C>T | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065700 | c.492C>A | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065703 | c.489A>G | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065886 | c.306C>G | synonymous_variant | 0.36 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
Rv2752c | 3065901 | c.291A>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065946 | p.Gly82Ala | missense_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065955 | c.235_237delTTGinsCTC | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066501 | c.-310G>C | upstream_gene_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066522 | c.-331C>G | upstream_gene_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066531 | c.-340C>G | upstream_gene_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066549 | c.-358T>C | upstream_gene_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066561 | c.-370A>C | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
thyX | 3067304 | c.642A>G | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
thyX | 3067313 | c.633G>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067316 | c.630A>G | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067319 | c.627G>C | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
thyX | 3067349 | c.597G>C | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyX | 3067355 | c.591A>C | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
thyX | 3067373 | c.573C>G | synonymous_variant | 0.37 | para-aminosalicylic_acid | |
thyX | 3067394 | c.552G>C | synonymous_variant | 0.28 | para-aminosalicylic_acid | |
thyX | 3067406 | c.540A>G | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyX | 3067412 | c.534C>G | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyX | 3067616 | c.330C>G | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067619 | c.327A>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067652 | c.294T>C | synonymous_variant | 0.38 | para-aminosalicylic_acid | |
thyX | 3067676 | c.270C>G | synonymous_variant | 0.48 | para-aminosalicylic_acid | |
thyX | 3067679 | p.Cys89Leu | missense_variant | 0.38 | para-aminosalicylic_acid | |
thyX | 3067685 | c.261A>G | synonymous_variant | 0.38 | para-aminosalicylic_acid | |
thyX | 3067693 | p.Ile85Val | missense_variant | 0.34 | para-aminosalicylic_acid | |
thyX | 3067694 | c.252G>C | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
thyX | 3067702 | p.Ile82Leu | missense_variant | 0.33 | para-aminosalicylic_acid | |
thyX | 3067713 | p.Val78Ala | missense_variant | 0.32 | para-aminosalicylic_acid | |
thyX | 3067718 | c.228C>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyX | 3067721 | c.225T>C | synonymous_variant | 0.28 | para-aminosalicylic_acid | |
thyX | 3067727 | c.219A>C | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067742 | c.204A>C | synonymous_variant | 0.31 | para-aminosalicylic_acid | |
thyX | 3067781 | c.165C>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyX | 3067788 | p.Lys53Arg | missense_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067790 | c.156C>A | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067793 | c.153T>C | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067802 | c.144C>G | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyX | 3067811 | c.135G>A | synonymous_variant | 0.28 | para-aminosalicylic_acid | |
thyX | 3067838 | c.108C>G | synonymous_variant | 0.28 | para-aminosalicylic_acid | |
thyX | 3067850 | c.96A>C | synonymous_variant | 0.3 | para-aminosalicylic_acid | |
thyX | 3067869 | p.Thr26Ser | missense_variant | 0.33 | para-aminosalicylic_acid | |
thyX | 3067874 | c.72C>G | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyX | 3067877 | c.69G>A | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyX | 3067883 | c.63C>G | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyX | 3067886 | c.60A>C | synonymous_variant | 0.35 | para-aminosalicylic_acid | |
thyX | 3067889 | c.57C>G | synonymous_variant | 0.34 | para-aminosalicylic_acid | |
thyX | 3067935 | p.Thr4Ile | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyA | 3073959 | c.513T>C | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.35 | para-aminosalicylic_acid | |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.38 | para-aminosalicylic_acid | |
thyA | 3074001 | c.471C>G | synonymous_variant | 0.42 | para-aminosalicylic_acid | |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyA | 3074010 | c.462C>G | synonymous_variant | 0.51 | para-aminosalicylic_acid | |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.46 | para-aminosalicylic_acid | |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.45 | para-aminosalicylic_acid | |
thyA | 3074056 | p.Glu139Pro | missense_variant | 0.4 | para-aminosalicylic_acid | |
thyA | 3074061 | c.411A>G | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
thyA | 3074076 | c.396C>G | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyA | 3074097 | c.375C>G | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyA | 3074100 | c.372T>C | synonymous_variant | 0.36 | para-aminosalicylic_acid | |
thyA | 3074106 | c.366T>C | synonymous_variant | 0.33 | para-aminosalicylic_acid | |
thyA | 3074127 | c.345G>C | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074142 | c.330C>T | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074147 | p.Ile109Val | missense_variant | 0.19 | para-aminosalicylic_acid | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
Rv3236c | 3612640 | c.477C>T | synonymous_variant | 0.19 | pyrazinamide | |
Rv3236c | 3612661 | c.456G>C | synonymous_variant | 0.21 | pyrazinamide | |
Rv3236c | 3612667 | c.450T>G | synonymous_variant | 0.21 | pyrazinamide | |
Rv3236c | 3612670 | c.447G>C | synonymous_variant | 0.2 | pyrazinamide | |
Rv3236c | 3612685 | c.432C>T | synonymous_variant | 0.2 | pyrazinamide | |
Rv3236c | 3612694 | p.Arg141Gln | missense_variant | 0.2 | pyrazinamide | |
Rv3236c | 3612708 | c.409T>C | synonymous_variant | 0.2 | pyrazinamide | |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
lpqB | 3623417 | c.1494A>C | synonymous_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3623428 | c.1483T>C | synonymous_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624074 | c.837G>C | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624077 | c.834G>C | synonymous_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624082 | c.829A>C | synonymous_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624089 | c.822C>G | synonymous_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624094 | c.817A>C | synonymous_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624100 | c.811T>C | synonymous_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624107 | c.804C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3624116 | c.795A>G | synonymous_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624119 | c.792C>G | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624125 | c.786A>G | synonymous_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624133 | c.778A>C | synonymous_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624166 | p.Met249Leu | missense_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624188 | c.723G>C | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624649 | c.262T>C | synonymous_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624656 | c.255C>T | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624680 | c.231T>G | synonymous_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624686 | p.Glu75Gln | missense_variant | 0.36 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
mtrB | 3625222 | c.1392T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625240 | c.-330T>C | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625243 | c.-333T>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625246 | c.-336G>A | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625255 | c.-345T>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625258 | c.-348G>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625267 | c.1347T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625270 | c.-360G>C | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625291 | c.-381A>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625313 | p.Arg434Lys | missense_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625592 | p.Ser341Asn | missense_variant | 0.38 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625594 | c.-684T>C | upstream_gene_variant | 0.36 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625602 | c.-692T>C | upstream_gene_variant | 0.39 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625612 | c.-702G>C | upstream_gene_variant | 0.41 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625616 | p.Arg333Ala | missense_variant | 0.42 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625624 | c.-714C>G | upstream_gene_variant | 0.45 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625630 | c.-720C>G | upstream_gene_variant | 0.47 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625636 | c.978C>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625656 | c.958T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 0.41 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625687 | c.-777G>T | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625702 | c.-792C>T | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625705 | c.909C>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625711 | c.903C>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625714 | c.-804C>T | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625720 | c.894G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625732 | c.882C>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625735 | c.-825C>T | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625741 | c.-831G>A | upstream_gene_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625755 | p.Ala287Thr | missense_variant | 0.37 | rifampicin | Uncertain significance |
bedaquiline | ||||||
lpqB | 3625762 | c.-852A>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625765 | c.849C>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625806 | c.808A>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625807 | c.807C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625852 | c.762A>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625864 | c.-954T>G | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625876 | c.738G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625888 | c.726G>A | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626325 | p.Thr97Ala | missense_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626329 | c.285G>A | synonymous_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626332 | c.282T>C | synonymous_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626349 | p.Ser89Gly | missense_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626350 | c.264C>G | synonymous_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626377 | p.Asp79Glu | missense_variant | 0.47 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626383 | c.231G>C | synonymous_variant | 0.42 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626386 | c.228G>C | synonymous_variant | 0.44 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626390 | p.Arg75Lys | missense_variant | 0.38 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626400 | p.Ile72Val | missense_variant | 0.41 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626407 | c.207C>G | synonymous_variant | 0.35 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626410 | c.204T>C | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626425 | c.189C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626562 | p.Pro18Ser | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
mtrB | 3626744 | c.-131G>C | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626759 | c.591T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626774 | c.-163_-161delAGGinsCGC | upstream_gene_variant | 0.36 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626783 | c.-170C>G | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3626792 | c.558G>T | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626795 | c.-182C>T | upstream_gene_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626798 | c.-185T>C | upstream_gene_variant | 0.36 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626804 | c.546A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626840 | c.-227C>G | upstream_gene_variant | 0.44 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626846 | c.504G>A | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626849 | c.-236C>T | upstream_gene_variant | 0.41 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626858 | c.-245A>G | upstream_gene_variant | 0.42 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626861 | c.-248C>G | upstream_gene_variant | 0.43 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626866 | c.-253T>C | upstream_gene_variant | 0.47 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626876 | c.-263A>G | upstream_gene_variant | 0.46 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626890 | c.-277T>C | upstream_gene_variant | 0.5 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626891 | c.-278G>C | upstream_gene_variant | 0.49 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626903 | c.-290T>C | upstream_gene_variant | 0.4 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626912 | c.-299T>G | upstream_gene_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626959 | c.-346C>T | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626972 | c.-359A>G | upstream_gene_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626987 | c.-374C>G | upstream_gene_variant | 0.43 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627005 | c.-392G>C | upstream_gene_variant | 0.38 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627008 | c.-395G>C | upstream_gene_variant | 0.42 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627011 | c.-398T>G | upstream_gene_variant | 0.4 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627023 | c.-410C>G | upstream_gene_variant | 0.48 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627056 | c.294C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627065 | c.-452G>C | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627068 | c.282T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627074 | c.-461G>C | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627080 | c.270T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627083 | c.-470G>C | upstream_gene_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627098 | c.252A>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627104 | c.-491C>G | upstream_gene_variant | 0.35 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627119 | c.231T>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627122 | c.-509T>C | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627128 | c.-515T>C | upstream_gene_variant | 0.35 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 0.42 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627181 | c.-568T>C | upstream_gene_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627182 | c.-569T>C | upstream_gene_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627187 | c.163T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627188 | c.162A>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627209 | c.-596G>A | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627221 | c.129C>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627233 | c.-620T>C | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627242 | c.108C>T | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
fbiB | 3640839 | c.-696C>G | upstream_gene_variant | 0.38 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiA | 3640850 | p.Glu103Gly | missense_variant | 0.39 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3640857 | c.-678G>C | upstream_gene_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3640863 | c.-672C>T | upstream_gene_variant | 0.33 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3640866 | c.-669T>C | upstream_gene_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiA | 3640871 | p.Ala110Gly | missense_variant | 0.32 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3640878 | c.-657T>C | upstream_gene_variant | 0.3 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642656 | c.1122G>C | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642662 | c.1128C>G | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642668 | c.1134A>C | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642677 | c.1143A>G | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642680 | c.1146A>G | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642684 | c.1150T>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642695 | c.1161G>A | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642701 | c.1167C>G | synonymous_variant | 0.24 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiB | 3642719 | c.1185T>C | synonymous_variant | 0.36 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
rpoA | 3877513 | p.Thr332Ser | missense_variant | 0.28 | rifampicin | |
rpoA | 3877515 | c.993G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877553 | p.Glu319Gln | missense_variant | 0.37 | rifampicin | |
rpoA | 3877587 | c.921A>G | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoA | 3877613 | p.Ile299Val | missense_variant | 0.52 | rifampicin | |
rpoA | 3877656 | c.852T>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.34 | rifampicin | |
rpoA | 3877704 | c.804G>C | synonymous_variant | 0.35 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.29 | rifampicin | |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3877842 | c.666A>G | synonymous_variant | 0.32 | rifampicin | |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.48 | rifampicin | |
rpoA | 3877872 | c.636C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoA | 3877875 | c.633T>G | synonymous_variant | 0.45 | rifampicin | |
rpoA | 3877893 | c.615C>T | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoA | 3877900 | p.Ser203Asn | missense_variant | 0.49 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoA | 3877908 | p.Asn200Ser | missense_variant | 0.45 | rifampicin | |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3878046 | c.462T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878049 | c.459G>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878082 | c.426T>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878094 | c.414C>G | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.4 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.43 | rifampicin | |
rpoA | 3878141 | p.Met123Leu | missense_variant | 0.42 | rifampicin | Uncertain significance |
rpoA | 3878143 | p.Gly122Asp | missense_variant | 0.43 | rifampicin | Uncertain significance |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoA | 3878169 | c.339G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoA | 3878205 | c.303T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.35 | rifa |