Rv3696c - c.549T>C


Drug resistance types
0 Sensitive 2 RR-TB 24 HR-TB 3 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 69 Other
lineage Counts
lineage Count
lineage4.9 15
12
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 5
lineage4.1;lineage4.8 2
M.canetti;lineage2.2 2
lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 9
lineage2.2.1 4
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9 3
lineage4.3.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.6.2.2 3
lineage4.1.1.1 2
lineage3 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 4
lineage4.3.4.2.1 1
La1.7;M.canetti;lineage4.9 1
lineage4.1.2 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
M.canetti;lineage4.9 1
lineage4 1
lineage2.2.1;lineage6.3 1
lineage4.1.3 2
La3 2
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 1
La3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.8 1
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 104
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6789621 Other lineage4.9 None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR9786604 Other None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR18213713 HR-TB None
SRR1710057 Other lineage2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR4816999 Other None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR990545 Other lineage3 None
ERR1063849 HR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR25827682 Other None
ERR9787197 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1184312 Other lineage2.2.1 None
ERR4820335 Other lineage4.1.2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6789626 Other None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR7535086 Other None
ERR3804169 HR-TB lineage4.1.3 None
SRR1172728 RR-TB La3 None
ERR702406 Other lineage2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR1184381 MDR-TB None
ERR11252612 Other La3;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819781 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4816466 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None