TB-Profiler result

Run: ERR4819781
Summary

Run ID: ERR4819781

Sample name:

Date: 2024-10-04T21:52:14.965131

Number of reads: 1381998

Percentage reads mapped: 42.91

Median coverage: 29.0

Strain: lineage2.2.1

Spoligotype:

Drug-resistance: Other

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage2 East-Asian RD105 0.94
La1.2.BCG M.bovis None 0.11
lineage2.2.1 East-Asian (Beijing) RD105;RD207;RD181 0.95
lineage2.2 East-Asian (Beijing) RD105;RD207 0.95
lineage6.2.3 West-Africa 2 RD702 0.07
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol embB p.His312Arg Mutation from literature
p.Leu359Ile Uncertain significance Mutation from literature
p.Ala659Thr Mutation from literature
pyrazinamide panD p.Val138Ala Mutation from literature
streptomycin
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
panD 4043869 p.Val138Ala missense_variant 0.32 pyrazinamide Mutation from literature
embB 4247448 p.His312Arg missense_variant 0.37 ethambutol Mutation from literature
embB 4247588 p.Leu359Ile missense_variant 0.33 ethambutol Uncertain significance Mutation from literature
embB 4248488 p.Ala659Thr missense_variant 0.41 ethambutol Mutation from literature
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
dnaA 30 c.30C>G synonymous_variant 0.36 isoniazid
dnaA 42 c.42C>T synonymous_variant 0.38 isoniazid
dnaA 612 c.612G>C synonymous_variant 0.38 isoniazid
dnaA 649 c.649C>T synonymous_variant 0.35 isoniazid Not assoc w R - Interim
dnaA 654 c.654A>G synonymous_variant 0.32 isoniazid
dnaA 660 c.660G>C synonymous_variant 0.32 isoniazid Not assoc w R - Interim
dnaA 663 c.663A>C synonymous_variant 0.32 isoniazid
dnaA 669 c.669C>T synonymous_variant 0.29 isoniazid
dnaA 672 c.672T>C synonymous_variant 0.29 isoniazid Not assoc w R - Interim
dnaA 678 c.678A>G synonymous_variant 0.31 isoniazid Not assoc w R - Interim
dnaA 681 c.681G>C synonymous_variant 0.35 isoniazid
dnaA 693 c.693A>G synonymous_variant 0.45 isoniazid Not assoc w R - Interim
dnaA 705 c.705A>G synonymous_variant 0.47 isoniazid
dnaA 708 c.708T>C synonymous_variant 0.47 isoniazid
dnaA 720 c.720G>A synonymous_variant 0.5 isoniazid
dnaA 741 c.741T>C synonymous_variant 0.46 isoniazid Not assoc w R - Interim
dnaA 750 c.750C>G synonymous_variant 0.44 isoniazid
dnaA 756 c.756T>C synonymous_variant 0.49 isoniazid
dnaA 768 c.768C>G synonymous_variant 0.49 isoniazid
dnaA 771 c.771A>C synonymous_variant 0.46 isoniazid
dnaA 786 c.786C>T synonymous_variant 0.36 isoniazid
dnaA 795 c.795A>C synonymous_variant 0.31 isoniazid Not assoc w R - Interim
dnaA 805 c.805_807delTTGinsCTC synonymous_variant 0.28 isoniazid
dnaA 813 c.813C>T synonymous_variant 0.29 isoniazid
dnaA 819 c.819C>T synonymous_variant 0.26 isoniazid
dnaA 822 c.822A>G synonymous_variant 0.23 isoniazid
dnaA 840 c.840G>A synonymous_variant 0.28 isoniazid
dnaA 846 c.846T>C synonymous_variant 0.32 isoniazid
dnaA 849 c.849A>G synonymous_variant 0.31 isoniazid
dnaA 876 c.876C>G synonymous_variant 0.31 isoniazid
dnaA 877 c.877T>C synonymous_variant 0.31 isoniazid
dnaA 882 c.882C>T synonymous_variant 0.33 isoniazid
dnaA 885 c.885T>C synonymous_variant 0.36 isoniazid
dnaA 897 c.897A>G synonymous_variant 0.39 isoniazid
dnaA 909 c.909A>C synonymous_variant 0.38 isoniazid Not assoc w R - Interim
dnaA 912 c.912T>G synonymous_variant 0.38 isoniazid
dnaA 918 c.918C>G synonymous_variant 0.38 isoniazid
dnaA 921 c.921A>G synonymous_variant 0.35 isoniazid Not assoc w R - Interim
dnaA 942 c.942C>G synonymous_variant 0.33 isoniazid
dnaA 945 c.945G>A synonymous_variant 0.33 isoniazid
dnaA 955 c.955A>C synonymous_variant 0.28 isoniazid
dnaA 960 c.960C>A synonymous_variant 0.26 isoniazid
dnaA 963 c.963C>G synonymous_variant 0.26 isoniazid
dnaA 984 c.984T>C synonymous_variant 0.29 isoniazid Not assoc w R - Interim
dnaA 1014 c.1014C>G synonymous_variant 0.28 isoniazid
dnaA 1024 c.1024T>C synonymous_variant 0.29 isoniazid
dnaA 1038 c.1038A>T synonymous_variant 0.33 isoniazid
dnaA 1041 c.1041G>A synonymous_variant 0.37 isoniazid
dnaA 1047 c.1047A>G synonymous_variant 0.39 isoniazid
dnaA 1068 c.1068T>C synonymous_variant 0.48 isoniazid
dnaA 1092 c.1092T>C synonymous_variant 0.39 isoniazid Not assoc w R - Interim
dnaA 1098 c.1098A>G synonymous_variant 0.4 isoniazid
dnaA 1104 c.1104T>C synonymous_variant 0.4 isoniazid
dnaA 1110 c.1110T>C synonymous_variant 0.41 isoniazid
dnaA 1113 c.1113A>G synonymous_variant 0.37 isoniazid
dnaA 1125 c.1125G>C synonymous_variant 0.4 isoniazid
dnaA 1137 c.1137C>G synonymous_variant 0.39 isoniazid
dnaA 1143 c.1143G>C synonymous_variant 0.35 isoniazid
dnaA 1152 c.1152A>G synonymous_variant 0.26 isoniazid
dnaA 1153 c.1153T>C synonymous_variant 0.26 isoniazid
dnaA 1188 c.1188G>A synonymous_variant 0.33 isoniazid
dnaA 1191 c.1191T>C synonymous_variant 0.35 isoniazid
dnaA 1197 c.1197T>C synonymous_variant 0.39 isoniazid Not assoc w R - Interim
dnaA 1204 c.1204C>T synonymous_variant 0.42 isoniazid
dnaA 1218 c.1218C>G synonymous_variant 0.45 isoniazid
dnaA 1220 p.Asn407Ser missense_variant 0.45 isoniazid
dnaA 1230 c.1230A>G synonymous_variant 0.42 isoniazid
dnaA 1236 c.1236C>T synonymous_variant 0.4 isoniazid
dnaA 1242 c.1242G>C synonymous_variant 0.43 isoniazid
dnaA 1245 c.1245G>C synonymous_variant 0.44 isoniazid Not assoc w R - Interim
dnaA 1254 c.1254T>C synonymous_variant 0.52 isoniazid
dnaA 1278 c.1278T>C synonymous_variant 0.48 isoniazid
dnaA 1284 c.1284C>G synonymous_variant 0.48 isoniazid
dnaA 1287 c.1287A>G synonymous_variant 0.48 isoniazid
dnaA 1290 c.1290G>A synonymous_variant 0.5 isoniazid
dnaA 1293 c.1293T>C synonymous_variant 0.5 isoniazid
dnaA 1299 c.1299G>C synonymous_variant 0.5 isoniazid Not assoc w R - Interim
dnaA 1383 c.1383A>G synonymous_variant 0.41 isoniazid
dnaA 1389 c.1389C>G synonymous_variant 0.39 isoniazid
dnaA 1392 c.1392A>G synonymous_variant 0.39 isoniazid
dnaA 1395 c.1395G>C synonymous_variant 0.38 isoniazid
dnaA 1404 c.1404T>C synonymous_variant 0.41 isoniazid
dnaA 1407 c.1407T>C synonymous_variant 0.42 isoniazid
dnaA 1413 c.1413A>C synonymous_variant 0.5 isoniazid
dnaA 1416 c.1416C>G synonymous_variant 0.53 isoniazid
dnaA 1428 c.1428C>G synonymous_variant 0.54 isoniazid
dnaA 1449 c.1449G>A synonymous_variant 0.55 isoniazid
dnaA 1461 c.1461C>G synonymous_variant 0.5 isoniazid
dnaA 1470 c.1470C>T synonymous_variant 0.44 isoniazid
dnaA 1485 c.1485A>G synonymous_variant 0.45 isoniazid
dnaA 1488 c.1488A>G synonymous_variant 0.45 isoniazid
dnaA 1497 c.1497T>C synonymous_variant 0.45 isoniazid
dnaA 1506 c.1506T>G synonymous_variant 0.42 isoniazid
gyrB 5803 c.564A>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrB 5806 c.567C>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrB 5809 c.570C>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrB 5824 c.585A>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrB 5827 c.588G>A synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrB 5849 c.610C>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrB 5854 c.615C>A synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrB 6115 c.876A>G synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrB 6123 p.Ala295Gly missense_variant 0.33 levofloxacin
moxifloxacin
gyrB 6127 c.888G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrB 6130 c.891T>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrB 6136 c.897G>A synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrB 6139 c.900G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrB 6238 c.999G>A synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6242 p.Arg335Lys missense_variant 0.31 levofloxacin
moxifloxacin
gyrB 6250 c.1011A>G synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6256 c.1017G>A synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrB 6265 c.1026C>T synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6268 c.1029C>G synonymous_variant 0.4 levofloxacin
moxifloxacin
gyrB 6280 c.1041T>C synonymous_variant 0.49 levofloxacin
moxifloxacin
gyrB 6286 c.1047T>C synonymous_variant 0.48 levofloxacin
moxifloxacin
gyrB 6289 c.1050C>T synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrB 6292 c.1053G>C synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 6304 c.-998C>G upstream_gene_variant 0.45 levofloxacin
moxifloxacin
gyrB 6307 c.1068T>G synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6319 c.1080G>C synonymous_variant 0.53 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 6361 c.-941G>A upstream_gene_variant 0.59 levofloxacin
moxifloxacin
gyrA 6362 c.-940T>C upstream_gene_variant 0.59 levofloxacin
moxifloxacin
gyrA 6649 c.-653T>C upstream_gene_variant 0.43 levofloxacin
moxifloxacin
gyrA 6655 c.-647T>C upstream_gene_variant 0.42 levofloxacin
moxifloxacin
gyrA 6670 c.-632G>C upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 6673 c.-629A>C upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 6676 c.-626T>G upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 6700 c.-602T>C upstream_gene_variant 0.54 levofloxacin
moxifloxacin
gyrA 6703 c.-599G>C upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 6709 c.-593A>G upstream_gene_variant 0.53 levofloxacin
moxifloxacin
gyrA 6712 c.-590G>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 6728 c.-574_-572delCTAinsTTG upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 6742 c.-560A>G upstream_gene_variant 0.51 levofloxacin
moxifloxacin
gyrB 6745 c.1506T>G synonymous_variant 0.5 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6751 c.-551G>C upstream_gene_variant 0.53 levofloxacin
moxifloxacin
gyrA 6760 c.-542G>C upstream_gene_variant 0.49 levofloxacin
moxifloxacin
gyrB 6763 c.1524G>C synonymous_variant 0.45 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6775 c.1536G>C synonymous_variant 0.45 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6793 c.1554T>C synonymous_variant 0.45 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6797 p.Gly520Thr missense_variant 0.48 levofloxacin
moxifloxacin
gyrB 6811 c.1572C>T synonymous_variant 0.52 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrB 6841 c.1602T>C synonymous_variant 0.46 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6844 c.-458T>C upstream_gene_variant 0.48 levofloxacin
moxifloxacin
gyrA 6853 c.-449A>G upstream_gene_variant 0.32 levofloxacin
moxifloxacin
gyrB 6856 c.1617T>C synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6859 c.1620T>C synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6862 c.1623C>G synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6865 c.-437G>A upstream_gene_variant 0.27 levofloxacin
moxifloxacin
gyrB 6878 c.1639T>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6881 c.-421_-419delTTGinsCTC upstream_gene_variant 0.26 levofloxacin
moxifloxacin
gyrA 6898 c.-404G>C upstream_gene_variant 0.23 levofloxacin
moxifloxacin
gyrA 6916 c.-386G>C upstream_gene_variant 0.26 levofloxacin
moxifloxacin
gyrB 6919 c.1680T>C synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6925 c.-377T>C upstream_gene_variant 0.36 levofloxacin
moxifloxacin
gyrB 6931 c.1692A>G synonymous_variant 0.36 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6949 c.-353A>G upstream_gene_variant 0.43 levofloxacin
moxifloxacin
gyrB 6952 c.1713C>G synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6967 c.-335T>C upstream_gene_variant 0.57 levofloxacin
moxifloxacin
gyrA 6973 c.-329G>C upstream_gene_variant 0.59 levofloxacin
moxifloxacin
gyrA 6982 c.-320A>C upstream_gene_variant 0.57 levofloxacin
moxifloxacin
gyrA 7007 c.-295C>T upstream_gene_variant 0.6 levofloxacin
moxifloxacin
gyrA 7010 c.-292C>T upstream_gene_variant 0.58 levofloxacin
moxifloxacin
gyrB 7023 p.Leu595Gln missense_variant 0.53 levofloxacin
moxifloxacin
gyrA 7033 c.-269G>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrB 7051 p.Glu604Asp missense_variant 0.47 levofloxacin
moxifloxacin
gyrA 7066 c.-236G>C upstream_gene_variant 0.47 levofloxacin
moxifloxacin
gyrA 7078 c.-224A>C upstream_gene_variant 0.53 levofloxacin
moxifloxacin
gyrA 7084 c.-218A>G upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 7090 c.-212C>T upstream_gene_variant 0.38 levofloxacin
moxifloxacin
gyrA 7093 c.-209T>G upstream_gene_variant 0.36 levofloxacin
moxifloxacin
gyrA 7099 c.-203G>A upstream_gene_variant 0.43 levofloxacin
moxifloxacin
gyrA 7108 c.-194G>A upstream_gene_variant 0.48 levofloxacin
moxifloxacin
gyrA 7114 c.-188C>A upstream_gene_variant 0.49 levofloxacin
moxifloxacin
gyrB 7124 p.Ser629Thr missense_variant 0.51 levofloxacin
moxifloxacin
gyrA 7129 c.-173T>C upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 7132 c.-170T>G upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 7141 c.-161T>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 7165 c.-137C>G upstream_gene_variant 0.56 levofloxacin
moxifloxacin
gyrA 7178 c.-124T>C upstream_gene_variant 0.53 levofloxacin
moxifloxacin
gyrB 7186 c.1947C>G synonymous_variant 0.46 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 7216 c.1977G>C synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7228 c.-74C>T upstream_gene_variant 0.32 levofloxacin
moxifloxacin
gyrB 7234 c.1995C>T synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7324 c.23_24insAGG disruptive_inframe_insertion 0.38 levofloxacin
moxifloxacin
gyrA 7334 c.33G>C synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrA 7335 p.Leu12Val missense_variant 0.44 levofloxacin
moxifloxacin
gyrA 7347 p.Glu16Gln missense_variant 0.46 levofloxacin
moxifloxacin
gyrA 7355 c.54T>C synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 7361 c.60C>T synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7391 c.90C>T synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7394 c.93T>C synonymous_variant 0.7 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7406 c.105G>C synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 7427 c.126G>C synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 7442 c.141G>C synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 7451 c.150C>G synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 7457 c.156T>C synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 7475 c.174A>G synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7480 p.Phe60Tyr missense_variant 0.49 levofloxacin
moxifloxacin
gyrA 7484 c.183T>C synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 7514 c.213C>G synonymous_variant 0.49 levofloxacin
moxifloxacin
gyrA 7523 c.222C>A synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 7532 c.231T>C synonymous_variant 0.57 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7541 c.240C>G synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7547 c.246C>T synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7562 c.261C>T synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 7571 c.270G>C synonymous_variant 0.52 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7595 c.294C>G synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 7601 c.300C>G synonymous_variant 0.65 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7607 c.306C>G synonymous_variant 0.67 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7622 c.321C>T synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 7625 c.324G>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 7631 c.330G>C synonymous_variant 0.65 levofloxacin
moxifloxacin
gyrA 7637 c.336C>G synonymous_variant 0.64 levofloxacin
moxifloxacin
gyrA 7658 c.357A>G synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 7664 c.363T>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 7670 c.369A>G synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 7676 c.375G>C synonymous_variant 0.71 levofloxacin
moxifloxacin
gyrA 7683 c.382_384delAGGinsCGC synonymous_variant 0.65 levofloxacin
moxifloxacin
gyrA 7694 c.393A>G synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrA 7697 c.396C>A synonymous_variant 0.56 levofloxacin
moxifloxacin
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 0.48 levofloxacin
moxifloxacin
gyrA 7715 c.414G>C synonymous_variant 0.43 levofloxacin
moxifloxacin
gyrA 7721 c.420G>A synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7725 c.424C>T synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 7784 c.483A>G synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 7793 c.492G>C synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 7796 c.495G>C synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 7799 c.498A>G synonymous_variant 0.58 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7814 c.513C>G synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7823 c.522G>C synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 7832 c.531G>T synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 7835 c.534A>G synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7853 c.552C>G synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 7859 c.558A>G synonymous_variant 0.54 levofloxacin
moxifloxacin
gyrA 8078 c.777A>G synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 8090 c.789C>A synonymous_variant 0.43 levofloxacin
moxifloxacin
gyrA 8096 c.795T>A synonymous_variant 0.48 levofloxacin
moxifloxacin
gyrA 8099 c.798T>C synonymous_variant 0.54 levofloxacin
moxifloxacin
gyrA 8111 c.810G>C synonymous_variant 0.65 levofloxacin
moxifloxacin
gyrA 8121 c.820T>C synonymous_variant 0.71 levofloxacin
moxifloxacin
gyrA 8129 c.828T>C synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrA 8135 c.834C>G synonymous_variant 0.8 levofloxacin
moxifloxacin
gyrA 8156 c.855T>C synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 8168 c.867A>G synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8177 c.876A>C synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 8189 c.888G>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8198 c.897T>C synonymous_variant 0.45 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8207 c.906T>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 8219 c.918T>C synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8234 c.933T>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 8237 c.936A>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 8247 p.Ile316Val missense_variant 0.28 levofloxacin
moxifloxacin
gyrA 8264 c.963T>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8267 c.966G>C synonymous_variant 0.36 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8270 c.969G>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 8276 c.975G>A synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 8283 p.Ile328Leu missense_variant 0.34 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8288 c.987T>C synonymous_variant 0.32 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8294 c.993T>C synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8324 c.1023T>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 8330 c.1029C>G synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8337 c.1036_1038delCTAinsTTG synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 8342 c.1041G>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8366 c.1065G>T synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8367 c.1066C>T synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8372 c.1071G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 8375 c.1074G>C synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 8382 p.Leu361Met missense_variant 0.4 levofloxacin
moxifloxacin
gyrA 8391 p.Tyr364His missense_variant 0.4 levofloxacin
moxifloxacin
gyrA 8399 c.1098T>C synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8400 p.Asp367Asn missense_variant 0.36 levofloxacin
moxifloxacin
gyrA 8417 c.1116C>G synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8420 c.1119T>C synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8423 c.1122G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 8442 c.1141C>T synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8480 c.1179C>A synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8486 c.1185T>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8528 c.1227G>C synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8531 c.1230G>C synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 8543 c.1242C>G synonymous_variant 0.53 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8546 c.1245T>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8553 c.1252C>A synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 8561 c.1260A>C synonymous_variant 0.59 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8588 c.1287G>A synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8603 c.1302A>G synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8619 c.1318T>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8624 c.1323G>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8636 c.1335A>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8642 c.1341A>G synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 8672 c.1371A>G synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8678 c.1377G>A synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 8786 c.1485T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8801 c.1500G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 8807 c.1506C>T synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 8810 c.1509A>G synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8816 c.1515C>G synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8818 p.Ser506Asn missense_variant 0.46 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8828 c.1527T>C synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 8829 c.1528T>C synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8852 c.1551T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 8867 c.1566A>G synonymous_variant 0.61 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8870 c.1569G>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8873 c.1572A>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8891 c.1590G>A synonymous_variant 0.59 levofloxacin
moxifloxacin
gyrA 8897 c.1596T>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8903 c.1602T>C synonymous_variant 0.64 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8933 c.1632G>C synonymous_variant 0.54 levofloxacin
moxifloxacin
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8966 c.1665C>G synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8967 p.Ala556Arg missense_variant 0.29 levofloxacin
moxifloxacin
gyrA 8987 c.1686C>A synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8990 c.1689C>G synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8996 c.1695T>C synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8998 p.Leu566Trp missense_variant 0.24 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9071 c.1770G>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 9080 c.1779G>T synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrA 9089 c.1788G>C synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9104 c.1803C>G synonymous_variant 0.5 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9119 c.1818A>G synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 9122 c.1821C>A synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 9143 c.1842T>C synonymous_variant 0.61 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 9153 p.Thr618Glu missense_variant 0.56 levofloxacin
moxifloxacin
gyrA 9158 c.1857C>T synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9161 c.1860C>G synonymous_variant 0.56 levofloxacin
moxifloxacin
gyrA 9182 c.1881T>C synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9191 c.1890G>C synonymous_variant 0.49 levofloxacin
moxifloxacin
gyrA 9200 c.1899A>G synonymous_variant 0.47 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9204 p.Ser635Thr missense_variant 0.43 levofloxacin
moxifloxacin
gyrA 9218 c.1917C>T synonymous_variant 0.37 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9227 c.1926C>G synonymous_variant 0.37 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9230 c.1929T>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 9233 c.1932C>G synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 9267 p.Asn656Gly missense_variant 0.38 levofloxacin
moxifloxacin
gyrA 9293 c.1992G>C synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 9296 c.1995T>C synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9299 c.1998G>C synonymous_variant 0.36 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9304 p.Gly668Glu missense_variant 1.0 levofloxacin
moxifloxacin
gyrA 9308 c.2007C>T synonymous_variant 0.42 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9312 c.2011C>T synonymous_variant 0.48 levofloxacin
moxifloxacin
gyrA 9317 c.2016G>T synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 9323 c.2022C>G synonymous_variant 0.39 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9335 c.2034G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 9345 c.2044A>C synonymous_variant 0.46 levofloxacin
moxifloxacin
gyrA 9365 c.2064G>A synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 9374 c.2073G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 9377 c.2076A>G synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9383 c.2082T>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 9386 c.2085T>C synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9395 c.2094G>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9398 c.2097T>C synonymous_variant 0.28 levofloxacin
moxifloxacin
gyrA 9611 p.Asp770Glu missense_variant 0.35 levofloxacin
moxifloxacin
gyrA 9626 c.2325T>C synonymous_variant 0.4 levofloxacin
moxifloxacin
gyrA 9629 c.2328C>G synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9630 p.Val777Ile missense_variant 0.42 levofloxacin
moxifloxacin
gyrA 9635 c.2334T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 9638 c.2337C>G synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrA 9644 c.2343T>G synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 9650 c.2349G>C synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 9656 c.2355C>G synonymous_variant 0.45 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9665 c.2364A>C synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 9666 p.Arg789Gly missense_variant 0.43 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9674 c.2373T>C synonymous_variant 0.43 levofloxacin
moxifloxacin
Rv0010c 13893 c.-335T>G upstream_gene_variant 0.27 isoniazid
Rv0010c 13897 c.-339C>T upstream_gene_variant 0.28 isoniazid
Rv0010c 13903 c.-345A>G upstream_gene_variant 0.31 isoniazid
Rv0010c 13909 c.-351G>C upstream_gene_variant 0.3 isoniazid
fgd1 490782 c.-1G>C upstream_gene_variant 0.38 pretomanid
delamanid
clofazimine
fgd1 490797 c.15G>A synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 490800 c.18A>C synonymous_variant 0.47 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 490803 c.21T>A synonymous_variant 0.5 pretomanid
delamanid
clofazimine
fgd1 490812 c.30A>G synonymous_variant 0.55 pretomanid
delamanid
clofazimine
fgd1 490815 c.33G>C synonymous_variant 0.58 pretomanid
delamanid
clofazimine
fgd1 490827 c.45C>T synonymous_variant 0.59 pretomanid
delamanid
clofazimine
fgd1 490848 c.66A>G synonymous_variant 0.58 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 490851 c.69A>T synonymous_variant 0.62 pretomanid
delamanid
clofazimine
fgd1 490868 p.Ala29Gly missense_variant 0.61 pretomanid
delamanid
clofazimine
fgd1 490887 c.105G>A synonymous_variant 0.67 pretomanid
delamanid
clofazimine
fgd1 490890 c.108C>G synonymous_variant 0.63 pretomanid
delamanid
clofazimine
fgd1 490896 c.114C>T synonymous_variant 0.63 pretomanid
delamanid
clofazimine
fgd1 490905 c.123T>C synonymous_variant 0.53 pretomanid
delamanid
clofazimine
fgd1 490911 c.129T>G synonymous_variant 0.5 pretomanid
delamanid
clofazimine
fgd1 490917 c.135C>G synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 490921 p.Gln47Glu missense_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491043 c.261T>G synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fgd1 491173 c.391C>A synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491181 c.399T>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491184 c.402A>G synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491191 p.Gly137Arg missense_variant 0.42 pretomanid
delamanid
clofazimine
fgd1 491194 c.412_414delCTAinsTTG synonymous_variant 0.42 pretomanid
delamanid
clofazimine
fgd1 491202 c.420G>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491203 p.Gln141Glu missense_variant 0.43 pretomanid
delamanid
clofazimine
fgd1 491212 p.Ser144Arg missense_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491217 c.435T>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491232 c.450T>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491241 p.Asp153Glu missense_variant 0.48 pretomanid
delamanid
clofazimine
fgd1 491244 c.462T>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491259 c.477T>C synonymous_variant 0.35 pretomanid
delamanid
clofazimine
fgd1 491283 p.Asp167Glu missense_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491286 c.504G>C synonymous_variant 0.4 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 491289 c.507C>G synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491292 c.510G>C synonymous_variant 0.42 pretomanid
delamanid
clofazimine
fgd1 491295 c.513C>G synonymous_variant 0.42 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 491296 p.Val172Ile missense_variant 0.42 pretomanid
delamanid
clofazimine
fgd1 491302 p.Ile174Val missense_variant 0.44 pretomanid
delamanid
clofazimine
fgd1 491307 c.525C>G synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491313 c.531C>G synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491319 c.537G>C synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491325 c.543G>C synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491337 c.555C>G synonymous_variant 0.36 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 491340 c.558C>G synonymous_variant 0.3 pretomanid
delamanid
clofazimine
fgd1 491349 c.567T>C synonymous_variant 0.29 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fgd1 491526 c.744T>C synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fgd1 491535 c.753G>C synonymous_variant 0.37 pretomanid
delamanid
clofazimine
fgd1 491542 c.760T>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491547 c.765A>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491550 c.768T>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491553 c.771G>A synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fgd1 491601 c.819T>C synonymous_variant 0.34 pretomanid
delamanid
clofazimine
fgd1 491610 c.828A>G synonymous_variant 0.34 pretomanid
delamanid
clofazimine
fgd1 491616 c.834A>G synonymous_variant 0.36 pretomanid
delamanid
clofazimine
fgd1 491620 p.Ile280Val missense_variant 0.35 pretomanid
delamanid
clofazimine
fgd1 491643 c.861G>A synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fgd1 491646 c.864G>C synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fgd1 491649 c.867C>T synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fgd1 491658 c.876A>G synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fgd1 491661 c.879C>G synonymous_variant 0.23 pretomanid
delamanid
clofazimine
fgd1 491673 c.891A>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fgd1 491742 c.960T>C synonymous_variant 1.0 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R
mshA 575084 c.-264T>C upstream_gene_variant 0.42 isoniazid
ethionamide
mshA 575117 c.-231T>C upstream_gene_variant 0.5 isoniazid
ethionamide
mshA 575118 c.-230_-228delACGinsGCC upstream_gene_variant 0.5 isoniazid
ethionamide
mshA 575124 c.-224_-222delGGGinsCGC upstream_gene_variant 0.45 isoniazid
ethionamide
mshA 575137 c.-211C>G upstream_gene_variant 0.45 isoniazid
ethionamide
mshA 575144 c.-204T>C upstream_gene_variant 0.5 isoniazid
ethionamide
mshA 575154 c.-194_-192delGTGinsCTC upstream_gene_variant 0.43 isoniazid
ethionamide
mshA 575161 c.-187_-186delTTinsCG upstream_gene_variant 0.43 isoniazid
ethionamide
mshA 575659 c.312A>G synonymous_variant 0.26 isoniazid
ethionamide
mshA 575662 c.315C>G synonymous_variant 0.27 isoniazid
ethionamide
mshA 575665 c.318G>A synonymous_variant 0.28 isoniazid
ethionamide
mshA 575674 c.327G>C synonymous_variant 0.33 isoniazid
ethionamide
mshA 575695 c.348C>G synonymous_variant 0.25 isoniazid Not assoc w R - Interim
ethionamide
mshA 575701 c.354G>A synonymous_variant 0.22 isoniazid
ethionamide
mshA 575713 c.366G>A synonymous_variant 0.4 isoniazid
ethionamide
mshA 575719 c.372C>T synonymous_variant 0.39 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
mshA 575734 c.387T>G synonymous_variant 0.43 isoniazid
ethionamide
mshA 575737 c.390T>C synonymous_variant 0.44 isoniazid
ethionamide
mshA 575746 c.399C>G synonymous_variant 0.44 isoniazid
ethionamide
mshA 575752 c.405G>C synonymous_variant 0.45 isoniazid
ethionamide
mshA 575755 c.408G>A synonymous_variant 0.44 isoniazid
ethionamide
mshA 575756 c.409C>T synonymous_variant 0.45 isoniazid
ethionamide
mshA 575770 c.423G>A synonymous_variant 0.43 isoniazid
ethionamide
mshA 575771 p.Val142Ser missense_variant 0.42 isoniazid
ethionamide
mshA 575779 c.432A>G synonymous_variant 0.42 isoniazid
ethionamide
mshA 575782 c.435G>C synonymous_variant 0.45 isoniazid
ethionamide
mshA 575809 c.462C>T synonymous_variant 0.46 isoniazid
ethionamide
mshA 575812 c.465C>T synonymous_variant 0.46 isoniazid
ethionamide
mshA 575821 c.474G>C synonymous_variant 0.44 isoniazid
ethionamide
mshA 575824 c.477T>G synonymous_variant 0.46 isoniazid
ethionamide
mshA 575830 c.483C>G synonymous_variant 0.44 isoniazid
ethionamide
mshA 575833 c.486C>G synonymous_variant 0.45 isoniazid
ethionamide
mshA 575845 c.498C>T synonymous_variant 0.46 isoniazid Not assoc w R - Interim
ethionamide
mshA 575884 c.537G>C synonymous_variant 0.52 isoniazid
ethionamide
mshA 575887 c.540G>C synonymous_variant 0.51 isoniazid
ethionamide
mshA 575893 c.546C>G synonymous_variant 0.56 isoniazid
ethionamide
mshA 575896 c.549G>C synonymous_variant 0.57 isoniazid
ethionamide
mshA 575907 p.Ala187Val missense_variant 0.54 isoniazid Not assoc w R
ethionamide Not assoc w R
mshA 575917 p.Asp190Glu missense_variant 0.5 isoniazid
ethionamide
mshA 575920 c.573C>G synonymous_variant 0.48 isoniazid
ethionamide
mshA 575924 p.Gly193Ser missense_variant 0.44 isoniazid
ethionamide
mshA 575944 c.597T>C synonymous_variant 0.39 isoniazid
ethionamide
mshA 575950 c.603C>G synonymous_variant 0.38 isoniazid
ethionamide
mshA 576229 c.882C>G synonymous_variant 0.24 isoniazid
ethionamide
mshA 576233 p.Ile296Val missense_variant 0.27 isoniazid
ethionamide
mshA 576241 c.894C>G synonymous_variant 0.31 isoniazid
ethionamide
mshA 576262 c.915T>C synonymous_variant 0.31 isoniazid
ethionamide
mshA 576271 c.924A>C synonymous_variant 0.23 isoniazid
ethionamide
mshA 576281 c.934C>T synonymous_variant 0.21 isoniazid Not assoc w R - Interim
ethionamide
mshA 576285 p.Val313Ala missense_variant 0.21 isoniazid
ethionamide
mshA 576289 c.942G>C synonymous_variant 0.22 isoniazid
ethionamide
mshA 576292 c.945C>G synonymous_variant 0.29 isoniazid
ethionamide
mshA 576301 c.954A>G synonymous_variant 0.24 isoniazid
ethionamide
ccsA 619507 c.-384A>G upstream_gene_variant 0.37 kanamycin
capreomycin
amikacin
ccsA 619552 c.-339A>G upstream_gene_variant 0.26 kanamycin
capreomycin
amikacin
ccsA 619555 c.-336C>G upstream_gene_variant 0.28 kanamycin
capreomycin
amikacin
ccsA 619561 c.-330G>C upstream_gene_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 619570 c.-321G>C upstream_gene_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 619574 c.-317G>A upstream_gene_variant 0.33 kanamycin
capreomycin
amikacin
ccsA 619579 c.-312G>C upstream_gene_variant 0.32 kanamycin
capreomycin
amikacin
ccsA 619584 c.-307A>T upstream_gene_variant 0.34 kanamycin
capreomycin
amikacin
ccsA 619591 c.-300G>C upstream_gene_variant 0.38 kanamycin
capreomycin
amikacin
ccsA 619609 c.-282G>T upstream_gene_variant 0.34 kanamycin
capreomycin
amikacin
ccsA 619634 c.-257T>A upstream_gene_variant 0.32 kanamycin
capreomycin
amikacin
ccsA 619645 c.-246G>C upstream_gene_variant 0.29 kanamycin
capreomycin
amikacin
ccsA 620245 c.355T>C synonymous_variant 0.24 kanamycin
capreomycin
amikacin
ccsA 620249 p.Ser120Cys missense_variant 0.23 kanamycin
capreomycin
amikacin
ccsA 620254 c.364_366delCTCinsTTG synonymous_variant 0.24 kanamycin
capreomycin
amikacin
ccsA 620265 c.375C>G synonymous_variant 0.35 kanamycin
capreomycin
amikacin
ccsA 620268 c.378G>C synonymous_variant 0.38 kanamycin
capreomycin
amikacin
ccsA 620283 c.393T>C synonymous_variant 0.45 kanamycin
capreomycin
amikacin
ccsA 620284 p.Ala132Pro missense_variant 0.45 kanamycin
capreomycin
amikacin
ccsA 620288 p.Arg133Gln missense_variant 0.47 kanamycin
capreomycin
amikacin
ccsA 620295 c.405G>T synonymous_variant 0.54 kanamycin
capreomycin
amikacin
ccsA 620310 c.420C>T synonymous_variant 0.56 kanamycin
capreomycin
amikacin
ccsA 620317 p.Val143Leu missense_variant 0.57 kanamycin
capreomycin
amikacin
ccsA 620340 c.450C>G synonymous_variant 0.61 kanamycin
capreomycin
amikacin
ccsA 620346 c.456C>G synonymous_variant 0.59 kanamycin
capreomycin
amikacin
ccsA 620362 p.Ala158Thr missense_variant 0.59 kanamycin
capreomycin
amikacin
ccsA 620367 c.477T>C synonymous_variant 0.52 kanamycin
capreomycin
amikacin
ccsA 620373 c.483C>G synonymous_variant 0.44 kanamycin
capreomycin
amikacin
ccsA 620376 c.486G>C synonymous_variant 0.45 kanamycin
capreomycin
amikacin
ccsA 620385 c.495G>C synonymous_variant 0.44 kanamycin
capreomycin
amikacin
ccsA 620388 c.498A>G synonymous_variant 0.42 kanamycin
capreomycin
amikacin
ccsA 620389 c.499C>T synonymous_variant 0.45 kanamycin
capreomycin
amikacin
ccsA 620412 c.522T>C synonymous_variant 0.48 kanamycin
capreomycin
amikacin
ccsA 620415 c.525T>C synonymous_variant 0.46 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620421 c.531G>C synonymous_variant 0.43 kanamycin
capreomycin
amikacin
ccsA 620424 c.534G>C synonymous_variant 0.43 kanamycin
capreomycin
amikacin
ccsA 620433 c.543C>G synonymous_variant 0.4 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620436 c.546T>A synonymous_variant 0.36 kanamycin
capreomycin
amikacin
ccsA 620439 c.549T>C synonymous_variant 0.38 kanamycin
capreomycin
amikacin
ccsA 620445 c.555A>G synonymous_variant 0.37 kanamycin
capreomycin
amikacin
ccsA 620460 c.570T>G synonymous_variant 0.3 kanamycin
capreomycin
amikacin
ccsA 620461 p.Val191Ile missense_variant 0.3 kanamycin
capreomycin
amikacin
ccsA 620481 c.591T>G synonymous_variant 0.29 kanamycin
capreomycin
amikacin
ccsA 620482 p.Val198Leu missense_variant 0.29 kanamycin
capreomycin
amikacin
ccsA 620490 c.600A>C synonymous_variant 0.26 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620622 c.732G>C synonymous_variant 0.22 kanamycin
capreomycin
amikacin
ccsA 620625 p.Ile245Met missense_variant 1.0 kanamycin Uncertain significance
capreomycin Not assoc w R
amikacin Not assoc w R
ccsA 620631 c.741T>G synonymous_variant 0.26 kanamycin
capreomycin
amikacin
ccsA 620646 c.756G>A synonymous_variant 0.29 kanamycin
capreomycin
amikacin
ccsA 620649 c.759A>G synonymous_variant 0.28 kanamycin
capreomycin
amikacin
ccsA 620682 c.792G>A synonymous_variant 0.44 kanamycin
capreomycin
amikacin
ccsA 620688 c.798G>C synonymous_variant 0.43 kanamycin
capreomycin
amikacin
ccsA 620710 p.Val274Ile missense_variant 0.4 kanamycin
capreomycin
amikacin
ccsA 620718 c.828G>C synonymous_variant 0.39 kanamycin
capreomycin
amikacin
ccsA 620721 c.831G>C synonymous_variant 0.42 kanamycin
capreomycin
amikacin
ccsA 620733 c.843G>C synonymous_variant 0.33 kanamycin
capreomycin
amikacin
ccsA 620734 c.844C>A synonymous_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620739 c.849A>G synonymous_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620742 c.852G>C synonymous_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620745 c.855G>C synonymous_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620748 c.858T>A synonymous_variant 0.3 kanamycin
capreomycin
amikacin
ccsA 620763 c.873G>A synonymous_variant 0.35 kanamycin
capreomycin
amikacin
ccsA 620769 c.879C>G synonymous_variant 0.32 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620778 c.888T>C synonymous_variant 0.25 kanamycin
capreomycin
amikacin
Rv0565c 656052 c.1419A>C synonymous_variant 0.37 ethionamide
Rv0565c 656073 c.1396_1398delTTGinsCTC synonymous_variant 0.3 ethionamide
Rv0565c 656076 c.1395C>T synonymous_variant 0.26 ethionamide
Rv0565c 656085 c.1386A>G synonymous_variant 0.28 ethionamide
Rv0565c 656088 c.1383A>G synonymous_variant 0.28 ethionamide
Rv0565c 656091 c.1380T>C synonymous_variant 0.27 ethionamide
Rv0565c 656112 c.1359C>G synonymous_variant 0.21 ethionamide
Rv0565c 656219 p.His418Tyr missense_variant 0.31 ethionamide
Rv0565c 656220 c.1251A>C synonymous_variant 0.28 ethionamide
Rv0565c 656223 c.1248T>C synonymous_variant 0.27 ethionamide Not assoc w R - Interim
Rv0565c 656226 p.Ala415Ser missense_variant 0.28 ethionamide
Rv0565c 656238 p.Ala411Glu missense_variant 0.24 ethionamide
Rv0565c 656243 p.Leu410Met missense_variant 0.24 ethionamide
Rv0565c 656244 c.1227A>C synonymous_variant 0.24 ethionamide
Rv0565c 656265 c.1206G>C synonymous_variant 0.31 ethionamide
Rv0565c 656268 p.Met401Ile missense_variant 0.32 ethionamide
Rv0565c 656277 c.1194C>G synonymous_variant 0.3 ethionamide
Rv0565c 656289 c.1182C>G synonymous_variant 0.24 ethionamide
Rv0565c 656298 c.1173G>C synonymous_variant 0.24 ethionamide
Rv0565c 656383 p.Val363Asn missense_variant 0.21 ethionamide
Rv0565c 656391 c.1080C>G synonymous_variant 0.25 ethionamide
Rv0565c 656402 p.Ala357Thr missense_variant 0.34 ethionamide
Rv0565c 656412 c.1059T>G synonymous_variant 0.43 ethionamide
Rv0565c 656418 c.1053A>G synonymous_variant 0.51 ethionamide
Rv0565c 656448 p.Ile341Val missense_variant 0.57 ethionamide
Rv0565c 656454 c.1017G>C synonymous_variant 0.59 ethionamide
Rv0565c 656457 c.1014T>C synonymous_variant 0.56 ethionamide
Rv0565c 656469 c.1002T>C synonymous_variant 0.56 ethionamide
Rv0565c 656475 c.996A>G synonymous_variant 0.57 ethionamide
Rv0565c 656484 c.987T>C synonymous_variant 0.51 ethionamide
Rv0565c 656487 c.984T>C synonymous_variant 0.49 ethionamide Not assoc w R - Interim
Rv0565c 656493 c.978C>G synonymous_variant 0.51 ethionamide
Rv0565c 656502 c.969C>T synonymous_variant 0.47 ethionamide
Rv0565c 656511 c.960T>C synonymous_variant 0.45 ethionamide Not assoc w R - Interim
Rv0565c 657081 c.390G>A synonymous_variant 1.0 ethionamide Not assoc w R - Interim
Rv0565c 657142 p.Arg110His missense_variant 1.0 ethionamide Uncertain significance
Rv0565c 657259 p.Tyr71Phe missense_variant 0.38 ethionamide
Rv0565c 657261 c.210C>G synonymous_variant 0.38 ethionamide
Rv0565c 657264 c.207T>C synonymous_variant 0.37 ethionamide
Rv0565c 657267 c.204G>C synonymous_variant 0.41 ethionamide
Rv0565c 657300 c.171C>G synonymous_variant 0.61 ethionamide
Rv0565c 657303 c.168C>T synonymous_variant 0.59 ethionamide Not assoc w R - Interim
Rv0565c 657318 c.153T>C synonymous_variant 0.56 ethionamide
Rv0565c 657324 c.147C>G synonymous_variant 0.53 ethionamide
Rv0565c 657327 c.144C>G synonymous_variant 0.55 ethionamide
Rv0565c 657337 p.Arg45Gln missense_variant 0.45 ethionamide Uncertain significance
Rv0565c 657342 c.129T>C synonymous_variant 0.44 ethionamide
Rv0565c 657347 c.124A>C synonymous_variant 0.38 ethionamide
Rv0565c 657348 c.123A>G synonymous_variant 0.38 ethionamide
Rv0565c 657356 p.Ile39Val missense_variant 0.43 ethionamide
Rv0565c 657592 c.-122A>C upstream_gene_variant 0.3 ethionamide
Rv0565c 657600 c.-132_-131delCA upstream_gene_variant 0.3 ethionamide
Rv0565c 657606 c.-136T>G upstream_gene_variant 0.3 ethionamide
Rv0565c 657607 c.-138_-137insCA upstream_gene_variant 0.31 ethionamide
Rv0565c 657649 c.-179G>A upstream_gene_variant 0.63 ethionamide
Rv0565c 657671 c.-201A>G upstream_gene_variant 0.57 ethionamide
Rv0565c 657678 c.-209_-208delAAinsTC upstream_gene_variant 0.55 ethionamide
Rv0565c 657689 c.-220_-219delCAinsAC upstream_gene_variant 0.56 ethionamide
Rv0565c 657701 c.-231C>G upstream_gene_variant 0.55 ethionamide
Rv0565c 657734 c.-264T>C upstream_gene_variant 0.47 ethionamide
hadA 731682 c.-248C>G upstream_gene_variant 0.23 isoniazid
hadA 731732 c.-198G>A upstream_gene_variant 0.18 isoniazid
hadA 731774 c.-156T>C upstream_gene_variant 0.34 isoniazid
hadA 731789 c.-141A>G upstream_gene_variant 0.33 isoniazid
hadA 731792 c.-138G>A upstream_gene_variant 0.34 isoniazid
hadA 731801 c.-129C>G upstream_gene_variant 0.38 isoniazid
hadA 731816 c.-114G>A upstream_gene_variant 0.38 isoniazid
hadA 731840 c.-90G>C upstream_gene_variant 0.26 isoniazid
hadA 731843 c.-87T>C upstream_gene_variant 0.23 isoniazid
hadA 732272 p.Ala115Ser missense_variant 0.21 isoniazid
hadA 732295 c.366G>C synonymous_variant 0.41 isoniazid
hadA 732305 p.Ile126Val missense_variant 0.43 isoniazid
hadA 732308 p.Val127Ile missense_variant 0.43 isoniazid
hadA 732321 p.Glu131Ala missense_variant 0.54 isoniazid
hadA 732329 p.Leu134Val missense_variant 0.57 isoniazid Uncertain significance
hadA 732337 c.408G>A synonymous_variant 0.6 isoniazid
hadA 732378 c.450_452dupAGA disruptive_inframe_insertion 0.76 isoniazid
hadA 732396 p.Gly156Ala missense_variant 0.76 isoniazid
hadA 732398 p.Ala157Thr missense_variant 0.76 isoniazid
nusG 734352 c.99T>C synonymous_variant 0.27 rifampicin
nusG 734360 p.Ala36Val missense_variant 0.3 rifampicin Uncertain significance
nusG 734364 c.111G>C synonymous_variant 0.32 rifampicin
nusG 734370 c.117A>G synonymous_variant 0.37 rifampicin
nusG 734376 c.123G>A synonymous_variant 0.41 rifampicin
nusG 734407 p.Val52Ile missense_variant 0.57 rifampicin
nusG 734421 c.168A>G synonymous_variant 0.56 rifampicin
nusG 734424 c.171G>A synonymous_variant 0.59 rifampicin
nusG 734442 c.189G>A synonymous_variant 0.64 rifampicin
nusG 734451 c.198G>C synonymous_variant 0.58 rifampicin
nusG 734457 c.204C>G synonymous_variant 0.58 rifampicin
nusG 734472 c.219T>C synonymous_variant 0.56 rifampicin
nusG 734475 c.222T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
nusG 734532 c.279A>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
nusG 734556 c.303C>T synonymous_variant 0.6 rifampicin
nusG 734559 c.306T>C synonymous_variant 0.62 rifampicin
nusG 734580 c.327T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
nusG 734589 c.336G>C synonymous_variant 0.64 rifampicin
nusG 734596 c.343T>C synonymous_variant 0.64 rifampicin
nusG 734601 c.348C>G synonymous_variant 0.58 rifampicin
nusG 734610 c.357C>G synonymous_variant 0.65 rifampicin
nusG 734625 c.372T>C synonymous_variant 0.6 rifampicin
nusG 734631 c.378G>C synonymous_variant 0.61 rifampicin
nusG 734634 c.381G>C synonymous_variant 0.61 rifampicin
nusG 734637 c.384G>C synonymous_variant 0.62 rifampicin
nusG 734643 c.390G>C synonymous_variant 0.62 rifampicin
nusG 734652 c.399T>C synonymous_variant 0.52 rifampicin
nusG 734814 c.561G>C synonymous_variant 0.38 rifampicin
nusG 734826 c.573A>C synonymous_variant 0.39 rifampicin
nusG 734829 c.576C>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
nusG 734841 c.588G>C synonymous_variant 0.46 rifampicin
nusG 734847 c.594T>C synonymous_variant 0.46 rifampicin
nusG 734850 c.597C>G synonymous_variant 0.48 rifampicin
nusG 734853 c.600A>G synonymous_variant 0.48 rifampicin
nusG 734854 c.601T>C synonymous_variant 0.46 rifampicin
nusG 734882 p.Ala210Gly missense_variant 0.38 rifampicin
mmaA3 738304 c.-155C>A upstream_gene_variant 0.17 isoniazid
mmaA3 738308 c.-159C>A upstream_gene_variant 0.19 isoniazid
mmaA3 738336 c.-188_-187delTCinsAT upstream_gene_variant 0.19 isoniazid
rpoB 760060 p.Tyr85Leu missense_variant 0.31 rifampicin
rpoB 760067 c.261G>C synonymous_variant 0.27 rifampicin
rpoB 760070 c.264T>G synonymous_variant 0.29 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 760101 c.295T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760112 c.306T>C synonymous_variant 0.42 rifampicin
rpoB 760118 c.312T>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760121 c.315T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 760130 p.Asp108Glu missense_variant 0.49 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 760142 c.336C>G synonymous_variant 0.44 rifampicin
rpoB 760181 c.375T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 760223 c.417T>C synonymous_variant 0.38 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760283 c.477G>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.49 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.49 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.57 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.54 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoB 760361 c.555T>C synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.53 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.52 rifampicin Uncertain significance
rpoB 760380 p.Thr192Leu missense_variant 0.52 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.52 rifampicin
rpoB 760412 c.606C>G synonymous_variant 0.53 rifampicin
rpoB 760424 c.618C>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760522 p.Ser239Asn missense_variant 0.49 rifampicin Uncertain significance
rpoB 760532 c.726T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 760533 p.Val243Thr missense_variant 0.42 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760547 c.741G>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760563 p.Arg253Met missense_variant 0.53 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.62 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 760634 c.828T>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoB 760655 c.849A>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.7 rifampicin
rpoB 760674 c.868T>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 760718 c.912C>T synonymous_variant 0.59 rifampicin
rpoB 760724 c.918T>C synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760730 c.924T>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 760751 c.945G>C synonymous_variant 0.57 rifampicin
rpoB 760757 c.951T>C synonymous_variant 0.55 rifampicin
rpoB 760759 p.Val318Ala missense_variant 0.5 rifampicin
rpoB 760769 c.963C>G synonymous_variant 0.53 rifampicin
rpoB 760775 c.969G>C synonymous_variant 0.53 rifampicin
rpoB 760776 c.970_972delTCGinsAGC synonymous_variant 0.53 rifampicin
rpoB 760793 c.987A>G synonymous_variant 0.57 rifampicin
rpoB 760886 c.1080A>G synonymous_variant 0.5 rifampicin
rpoB 760925 c.1119T>C synonymous_variant 0.5 rifampicin
rpoB 760928 c.1122G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 760931 c.1125C>G synonymous_variant 0.46 rifampicin
rpoB 760934 c.1128C>T synonymous_variant 0.46 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760982 c.1176G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 760985 c.1179G>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>C synonymous_variant 0.38 rifampicin
rpoB 761006 c.1200C>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 761021 c.1215G>C synonymous_variant 0.46 rifampicin
rpoB 761027 c.1221A>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoB 761057 c.1251G>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoB 761102 c.1296A>G synonymous_variant 0.65 rifampicin
rpoB 761129 c.1323G>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 761132 c.1326G>T synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 761153 c.1347G>C synonymous_variant 0.62 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 761180 c.1374A>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 761189 c.1383T>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761207 c.1401C>T synonymous_variant 0.61 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 0.59 rifampicin
rpoB 761219 c.1413G>C synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 761306 c.1500C>G synonymous_variant 0.6 rifampicin
rpoB 761312 c.1506G>C synonymous_variant 0.61 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoB 761330 c.1524G>C synonymous_variant 0.57 rifampicin
rpoB 761354 c.1548C>T synonymous_variant 0.53 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.49 rifampicin
rpoB 761373 p.Val523His missense_variant 0.47 rifampicin
rpoB 761457 p.Pro551Ser missense_variant 0.38 rifampicin
rpoB 761477 c.1671C>G synonymous_variant 0.38 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.33 rifampicin
rpoB 761510 c.1704T>C synonymous_variant 0.41 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 761588 c.1782C>T synonymous_variant 0.51 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.51 rifampicin
rpoB 761612 c.1806G>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 761645 c.1839C>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 761648 c.1842T>C synonymous_variant 0.49 rifampicin
rpoB 761657 c.1851C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761675 c.1869G>C synonymous_variant 0.56 rifampicin
rpoB 761720 c.1914_1916delCGAinsGG frameshift_variant&synonymous_variant 0.36 rifampicin
rpoB 761727 p.Ser641Gly missense_variant 0.38 rifampicin
rpoB 761728 c.1923dupC frameshift_variant 0.38 rifampicin
rpoB 761732 c.1926C>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 761735 c.1929C>G synonymous_variant 0.36 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.39 rifampicin
rpoB 761750 c.1944G>C synonymous_variant 0.42 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.34 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.27 rifampicin
rpoB 761815 p.Ala670Glu missense_variant 0.28 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.26 rifampicin
rpoB 761848 p.Cys681Ser missense_variant 0.28 rifampicin
rpoB 761852 c.2046C>G synonymous_variant 0.28 rifampicin
rpoB 761858 c.2052G>C synonymous_variant 0.32 rifampicin
rpoB 761873 c.2067A>C synonymous_variant 0.29 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 0.42 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.41 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.41 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.43 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.43 rifampicin
rpoB 761916 p.Asp704Asn missense_variant 0.45 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 762008 c.2202C>T synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 762014 c.2208C>T synonymous_variant 0.64 rifampicin
rpoB 762017 c.2211A>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.78 rifampicin Uncertain significance
rpoB 762131 c.2325C>G synonymous_variant 0.72 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.67 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.68 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 762206 c.2400C>G synonymous_variant 0.58 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 762246 c.2440C>T synonymous_variant 0.67 rifampicin
rpoB 762254 c.2448T>G synonymous_variant 0.65 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.66 rifampicin
rpoB 762266 c.2460T>C synonymous_variant 0.63 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762317 c.2511A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.64 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.57 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.6 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.6 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.58 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.56 rifampicin
rpoB 762404 c.2598T>C synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 762410 c.-960T>C upstream_gene_variant 0.6 rifampicin
rpoB 762416 c.2610A>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 762419 c.-951C>G upstream_gene_variant 0.62 rifampicin
rpoC 762434 c.-936T>C upstream_gene_variant 0.52 rifampicin
rpoB 762449 c.2643C>A synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 762467 c.-903C>T upstream_gene_variant 0.55 rifampicin
rpoB 762488 c.2682G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 762489 p.Val895Gln missense_variant 0.32 rifampicin
rpoC 762509 c.-861T>G upstream_gene_variant 0.43 rifampicin
rpoB 762510 p.Ala902Pro missense_variant 0.43 rifampicin Uncertain significance
rpoC 762521 c.-849C>T upstream_gene_variant 0.42 rifampicin
rpoC 762533 c.-837T>C upstream_gene_variant 0.41 rifampicin
rpoC 762536 c.-834T>C upstream_gene_variant 0.38 rifampicin
rpoC 762537 c.-833T>C upstream_gene_variant 0.39 rifampicin
rpoC 762551 c.-819C>G upstream_gene_variant 0.31 rifampicin
rpoC 762581 c.-789T>C upstream_gene_variant 0.27 rifampicin
rpoC 762582 c.-788T>C upstream_gene_variant 0.27 rifampicin
rpoB 762810 p.Ala1002Ser missense_variant 0.24 rifampicin
rpoB 762813 p.Met1003Val missense_variant 0.26 rifampicin
rpoB 762818 c.3012C>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 762827 c.3021G>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 762863 c.3057T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762926 c.3120C>T synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 762989 c.-381G>C upstream_gene_variant 0.64 rifampicin
rpoB 762995 c.3189G>T synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 763013 c.-357C>G upstream_gene_variant 0.68 rifampicin
rpoC 763025 c.-345C>T upstream_gene_variant 0.65 rifampicin
rpoB 763028 c.3222T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>C synonymous_variant 0.35 rifampicin Not assoc w R
rpoB 763031 c.3225T>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 763148 c.-222G>C upstream_gene_variant 0.52 rifampicin
rpoC 763158 c.-212C>T upstream_gene_variant 0.57 rifampicin
rpoB 763166 c.3360A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763190 c.-180C>T upstream_gene_variant 0.53 rifampicin
rpoC 763202 c.-168A>G upstream_gene_variant 0.47 rifampicin
rpoC 763205 c.-165G>C upstream_gene_variant 0.44 rifampicin
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.44 rifampicin
rpoB 763214 c.3408T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 763226 c.-144A>G upstream_gene_variant 0.48 rifampicin
rpoB 763227 c.3421C>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 763238 c.3432T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763253 c.-117G>C upstream_gene_variant 0.32 rifampicin
rpoC 763256 c.-114G>A upstream_gene_variant 0.26 rifampicin
rpoC 763402 c.33C>G synonymous_variant 0.57 rifampicin
rpoC 763411 c.42T>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763414 c.45T>C synonymous_variant 0.6 rifampicin
rpoC 763441 c.72C>T synonymous_variant 0.62 rifampicin
rpoC 763444 c.75T>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>G synonymous_variant 0.65 rifampicin
rpoC 763528 c.159G>A synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 763573 c.204G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 763603 c.234C>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.62 rifampicin
rpoC 763660 c.291T>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.55 rifampicin
rpoC 763732 c.363C>G synonymous_variant 0.53 rifampicin
rpoC 763741 c.372C>T synonymous_variant 0.52 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.52 rifampicin
rpoC 763765 c.396T>C synonymous_variant 0.52 rifampicin
rpoC 763774 c.405G>C synonymous_variant 0.5 rifampicin
rpoC 763807 c.438T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.45 rifampicin
rpoC 763835 p.Ala156Met missense_variant 0.48 rifampicin
rpoC 763853 p.Val162Ile missense_variant 0.51 rifampicin
rpoC 763858 c.489A>G synonymous_variant 0.48 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 0.46 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 0.44 rifampicin
rpoC 763879 c.510A>G synonymous_variant 0.44 rifampicin
rpoC 763888 c.519G>C synonymous_variant 0.55 rifampicin
rpoC 763891 c.522G>C synonymous_variant 0.52 rifampicin
rpoC 763894 c.525A>G synonymous_variant 0.5 rifampicin
rpoC 763900 c.531G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763936 c.567C>G synonymous_variant 0.45 rifampicin
rpoC 763939 c.570G>A synonymous_variant 0.43 rifampicin
rpoC 763942 c.573C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763948 c.579G>A synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763949 c.580C>A synonymous_variant 0.46 rifampicin
rpoC 763954 c.585C>G synonymous_variant 0.48 rifampicin
rpoC 763963 c.594C>T synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763987 c.618C>T synonymous_variant 0.31 rifampicin
rpoC 763991 p.Ile208Leu missense_variant 0.29 rifampicin
rpoC 763996 c.627T>C synonymous_variant 0.29 rifampicin
rpoC 764002 c.633C>G synonymous_variant 0.32 rifampicin
rpoC 764005 c.636G>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 764044 c.675T>C synonymous_variant 0.24 rifampicin
rpoC 764059 c.690G>T synonymous_variant 0.39 rifampicin
rpoC 764083 c.714A>G synonymous_variant 0.4 rifampicin
rpoC 764098 c.729A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 764101 c.732C>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 764102 p.Val245Ile missense_variant 0.51 rifampicin
rpoC 764112 p.Tyr248Phe missense_variant 0.54 rifampicin
rpoC 764116 c.747C>T synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.55 rifampicin
rpoC 764140 c.771C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 764188 c.819A>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764195 p.Ser276Ile missense_variant 0.3 rifampicin
rpoC 764203 c.834G>C synonymous_variant 0.32 rifampicin
rpoC 764206 c.837T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764215 c.846A>G synonymous_variant 0.48 rifampicin
rpoC 764236 c.867G>A synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764248 c.879C>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 764257 c.888G>C synonymous_variant 0.54 rifampicin
rpoC 764266 c.897T>C synonymous_variant 0.5 rifampicin
rpoC 764269 c.900G>C synonymous_variant 0.5 rifampicin
rpoC 764272 c.903G>C synonymous_variant 0.53 rifampicin
rpoC 764278 c.909A>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 764405 c.1036A>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764419 c.1050C>G synonymous_variant 0.52 rifampicin
rpoC 764428 c.1059G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764431 c.1062G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.46 rifampicin
rpoC 764449 c.1080G>C synonymous_variant 0.46 rifampicin
rpoC 764452 c.1083T>C synonymous_variant 0.46 rifampicin
rpoC 764458 c.1089G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 764489 c.1120C>T synonymous_variant 0.55 rifampicin
rpoC 764497 c.1128A>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764510 c.1141C>T synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764527 c.1158C>T synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.37 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.4 rifampicin
rpoC 764560 c.1191T>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764581 c.1212T>C synonymous_variant 0.36 rifampicin
rpoC 764593 c.1224C>T synonymous_variant 0.33 rifampicin
rpoC 764611 c.1242G>T synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>C synonymous_variant 0.53 rifampicin
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 0.53 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.4 rifampicin Not assoc w R
rpoC 764815 c.1446A>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 764872 c.1503A>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 764911 c.1542A>G synonymous_variant 0.52 rifampicin
rpoC 764932 c.1563C>A synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 764935 c.1566T>C synonymous_variant 0.6 rifampicin
rpoC 764948 c.1579T>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 764995 c.1626C>G synonymous_variant 0.71 rifampicin Not assoc w R
rpoC 765019 c.1650A>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 765034 c.1665T>C synonymous_variant 0.53 rifampicin
rpoC 765040 c.1671T>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.49 rifampicin
rpoC 765073 c.1704G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765076 c.1707A>G synonymous_variant 0.43 rifampicin
rpoC 765079 c.1710T>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765082 c.1713G>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 765089 c.1720T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 765103 c.1734G>T synonymous_variant 0.4 rifampicin
rpoC 765292 c.1923G>C synonymous_variant 0.31 rifampicin
rpoC 765298 c.1929G>C synonymous_variant 0.32 rifampicin
rpoC 765300 p.Val644Ala missense_variant 0.31 rifampicin Uncertain significance
rpoC 765319 c.1950A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765326 p.His653Ala missense_variant 0.29 rifampicin Uncertain significance
rpoC 765329 p.Ser654Gly missense_variant 0.3 rifampicin
rpoC 765346 c.1977C>G synonymous_variant 0.38 rifampicin
rpoC 765349 c.1980T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765352 c.1983G>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 765383 p.Met672Leu missense_variant 0.53 rifampicin Uncertain significance
rpoC 765404 p.Leu679Val missense_variant 0.6 rifampicin
rpoC 765409 c.2040T>C synonymous_variant 0.59 rifampicin
rpoC 765421 c.2052C>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 765478 c.2109T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 765499 c.2130C>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 765529 c.2160C>T synonymous_variant 0.67 rifampicin
rpoC 765541 c.2172C>G synonymous_variant 0.58 rifampicin
rpoC 765553 c.2184C>T synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.51 rifampicin
rpoC 765559 c.2190G>C synonymous_variant 0.51 rifampicin
rpoC 765580 c.2211G>C synonymous_variant 0.49 rifampicin
rpoC 765613 p.His748Gln missense_variant 0.48 rifampicin
rpoC 765625 c.2256C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 765631 p.Asp754Glu missense_variant 0.42 rifampicin
rpoC 765700 c.2331T>C synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 765734 c.2365T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 765739 c.2370G>T synonymous_variant 0.46 rifampicin
rpoC 765751 c.2382C>G synonymous_variant 0.46 rifampicin
rpoC 765753 p.Asp795Ala missense_variant 0.46 rifampicin Uncertain significance
rpoC 765772 c.2403C>G synonymous_variant 0.6 rifampicin
rpoC 765784 c.2415C>G synonymous_variant 0.53 rifampicin
rpoC 765787 c.2418C>T synonymous_variant 0.54 rifampicin
rpoC 765793 c.2424C>G synonymous_variant 0.53 rifampicin
rpoC 765796 c.2427C>T synonymous_variant 0.5 rifampicin
rpoC 765811 c.2442T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 765814 c.2445A>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 765826 c.2457T>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 765850 c.2481G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 765883 c.2514C>G synonymous_variant 0.61 rifampicin
rpoC 765886 c.2517C>G synonymous_variant 0.62 rifampicin
rpoC 765892 c.2523T>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 765937 c.2568T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 765967 c.2598C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>G synonymous_variant 0.65 rifampicin
rpoC 765994 c.2625A>T synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.62 rifampicin
rpoC 766021 c.2652G>C synonymous_variant 0.65 rifampicin
rpoC 766027 c.2658G>C synonymous_variant 0.68 rifampicin
rpoC 766030 c.2661C>G synonymous_variant 0.65 rifampicin
rpoC 766043 p.Gln892Glu missense_variant 0.65 rifampicin
rpoC 766054 c.2685C>G synonymous_variant 0.63 rifampicin
rpoC 766082 p.Ala905Gln missense_variant 0.67 rifampicin
rpoC 766096 c.2727G>C synonymous_variant 0.59 rifampicin
rpoC 766129 c.2760C>G synonymous_variant 0.41 rifampicin
rpoC 766135 c.2766G>A synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 766141 c.2772C>T synonymous_variant 0.33 rifampicin
rpoC 766142 c.2773C>T synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 766303 c.2934C>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 766312 c.2943T>G synonymous_variant 0.44 rifampicin
rpoC 766327 c.2958C>A synonymous_variant 0.49 rifampicin
rpoC 766345 c.2976T>C synonymous_variant 0.54 rifampicin
rpoC 766348 c.2979A>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.6 rifampicin
rpoC 766363 c.2994G>C synonymous_variant 0.6 rifampicin
rpoC 766381 c.3012C>T synonymous_variant 0.62 rifampicin
rpoC 766384 c.3015A>G synonymous_variant 0.62 rifampicin
rpoC 766390 c.3021C>T synonymous_variant 0.59 rifampicin
rpoC 766408 c.3039C>G synonymous_variant 0.56 rifampicin
rpoC 766411 c.3042C>G synonymous_variant 0.54 rifampicin
rpoC 766426 c.3057C>T synonymous_variant 0.55 rifampicin
rpoC 766447 c.3078T>C synonymous_variant 0.56 rifampicin
rpoC 766462 c.3093G>C synonymous_variant 0.54 rifampicin
rpoC 766483 c.3114G>C synonymous_variant 0.41 rifampicin
rpoC 766484 p.Val1039Ile missense_variant 0.41 rifampicin Uncertain significance
rpoC 766492 c.3123T>C synonymous_variant 0.43 rifampicin
rpoC 766522 c.3153C>G synonymous_variant 0.36 rifampicin
rpoC 766528 c.3159T>C synonymous_variant 0.37 rifampicin
rpoC 766531 c.3162G>C synonymous_variant 0.35 rifampicin
rpoC 766549 c.3180G>T synonymous_variant 0.34 rifampicin
rpoC 766573 c.3204T>C synonymous_variant 0.39 rifampicin
rpoC 766582 c.3213C>G synonymous_variant 0.42 rifampicin
rpoC 766583 p.Gly1072Ser missense_variant 0.42 rifampicin
rpoC 766591 c.3222A>G synonymous_variant 0.44 rifampicin
rpoC 766594 c.3225G>C synonymous_variant 0.4 rifampicin
rpoC 766597 c.3228C>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 766607 p.Ile1080Leu missense_variant 0.47 rifampicin
rpoC 766630 c.3261G>C synonymous_variant 0.56 rifampicin
rpoC 766657 c.3288A>G synonymous_variant 0.63 rifampicin
rpoC 766660 c.3291G>C synonymous_variant 0.59 rifampicin
rpoC 766672 c.3303T>C synonymous_variant 0.61 rifampicin
rpoC 766673 p.Gly1102Asn missense_variant 0.57 rifampicin
rpoC 766726 c.3357T>C synonymous_variant 0.64 rifampicin
rpoC 766738 c.3369G>C synonymous_variant 0.65 rifampicin
rpoC 766765 c.3396A>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 766774 c.3405T>C synonymous_variant 0.73 rifampicin
rpoC 766801 c.3432C>G synonymous_variant 0.76 rifampicin
rpoC 766804 c.3435A>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 766864 c.3495G>C synonymous_variant 0.64 rifampicin
rpoC 766876 c.3507C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 766882 c.3513C>T synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 766894 c.3525T>C synonymous_variant 0.54 rifampicin
rpoC 766895 c.3526T>C synonymous_variant 0.55 rifampicin
rpoC 766900 c.3531T>C synonymous_variant 0.54 rifampicin
rpoC 766933 c.3564A>G synonymous_variant 0.44 rifampicin
rpoC 766945 c.3576A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.47 rifampicin
rpoC 766996 c.3627C>T synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.51 rifampicin
rpoC 767014 c.3645G>C synonymous_variant 0.51 rifampicin
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.59 rifampicin
rpoC 767059 c.3690T>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>A synonymous_variant 0.64 rifampicin
rpoC 767098 c.3729T>C synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoC 767119 c.3750A>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>A synonymous_variant 0.59 rifampicin
rpoC 767158 c.3789T>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 767180 p.Ala1271Gln missense_variant 0.6 rifampicin
rpoC 767191 c.3822C>G synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 767206 c.3837C>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 767209 c.3840T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoC 767212 c.3843G>C synonymous_variant 0.58 rifampicin
rpoC 767221 c.3852C>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 767230 c.3861G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 767233 c.3864T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 767263 c.3894T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 767264 p.Ala1299Gln missense_variant 0.27 rifampicin
mmpL5 775639 p.Ile948Val missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
mmpL5 775961 c.2520C>G synonymous_variant 0.27 bedaquiline
clofazimine
mmpL5 775966 p.Ala839Ser missense_variant 0.39 bedaquiline
clofazimine
mmpL5 775973 c.2506_2508delTTGinsCTC synonymous_variant 0.24 bedaquiline
clofazimine
mmpL5 775981 p.Leu834Met missense_variant 0.42 bedaquiline
clofazimine
mmpL5 775991 c.2490G>A synonymous_variant 0.25 bedaquiline
clofazimine
mmpL5 775997 c.2484T>C synonymous_variant 0.37 bedaquiline
clofazimine
mmpL5 776000 p.Leu827Ile missense_variant 0.38 bedaquiline
clofazimine
mmpL5 776005 p.Ile826Leu missense_variant 0.25 bedaquiline
clofazimine
mmpL5 776009 c.2472A>G synonymous_variant 0.44 bedaquiline
clofazimine
mmpL5 776030 c.2451G>A synonymous_variant 0.36 bedaquiline
clofazimine
mmpL5 776036 c.2445G>C synonymous_variant 0.3 bedaquiline
clofazimine
mmpL5 776039 c.2442C>G synonymous_variant 0.31 bedaquiline
clofazimine
mmpL5 776100 p.Thr794Ile missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
mmpL5 776182 p.Asp767Asn missense_variant 1.0 bedaquiline Not assoc w R
clofazimine Not assoc w R
mmpL5 776675 c.1806G>A synonymous_variant 0.17 bedaquiline
clofazimine
mmpL5 776705 c.1776C>T synonymous_variant 0.23 bedaquiline
clofazimine
mmpL5 776738 c.1743C>T synonymous_variant 0.32 bedaquiline
clofazimine
mmpL5 776756 p.Asp575Glu missense_variant 0.25 bedaquiline
clofazimine
mmpL5 777115 p.Met456Leu missense_variant 0.26 bedaquiline
clofazimine
mmpL5 777116 c.1365C>T synonymous_variant 0.26 bedaquiline
clofazimine
mmpL5 777133 p.Val450Ile missense_variant 0.31 bedaquiline
clofazimine
mmpL5 777158 c.1323C>G synonymous_variant 0.42 bedaquiline
clofazimine
mmpL5 777164 c.1317C>G synonymous_variant 0.44 bedaquiline
clofazimine
mmpL5 777170 c.1311T>C synonymous_variant 0.41 bedaquiline
clofazimine
mmpL5 777176 p.Glu435Asp missense_variant 0.4 bedaquiline
clofazimine
mmpL5 777191 c.1290C>G synonymous_variant 0.38 bedaquiline
clofazimine
mmpL5 777194 c.1287A>G synonymous_variant 0.39 bedaquiline
clofazimine
mmpL5 777206 c.1275A>G synonymous_variant 0.42 bedaquiline
clofazimine
mmpL5 777212 p.Ala423Thr missense_variant 0.38 bedaquiline
clofazimine
mmpL5 777215 c.1266C>G synonymous_variant 0.38 bedaquiline
clofazimine
mmpL5 777218 c.1263G>A synonymous_variant 0.39 bedaquiline
clofazimine
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0 bedaquiline
clofazimine
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781571 c.12C>T synonymous_variant 0.32 streptomycin
rpsL 781595 c.36T>C synonymous_variant 0.45 streptomycin
rpsL 781605 p.Ile16Val missense_variant 0.46 streptomycin Uncertain significance
rpsL 781608 p.Ser17Ala missense_variant 0.45 streptomycin
rpsL 781628 c.69T>C synonymous_variant 0.55 streptomycin Not assoc w R - Interim
rpsL 781631 c.72G>C synonymous_variant 0.55 streptomycin
rpsL 781649 c.90T>C synonymous_variant 0.59 streptomycin
rpsL 781655 c.96T>C synonymous_variant 0.64 streptomycin
rpsL 781700 c.141G>C synonymous_variant 0.65 streptomycin
rpsL 781703 c.144G>T synonymous_variant 0.62 streptomycin
rpsL 781715 c.156T>C synonymous_variant 0.63 streptomycin
rpsL 781728 c.169T>C synonymous_variant 0.62 streptomycin
rpsL 781736 c.177T>C synonymous_variant 0.68 streptomycin
rpsL 781742 c.183C>T synonymous_variant 0.68 streptomycin
rpsL 781748 c.189C>G synonymous_variant 0.68 streptomycin
rpsL 781754 c.195G>C synonymous_variant 0.69 streptomycin
rpsL 781760 c.201T>C synonymous_variant 0.66 streptomycin
rpsL 781772 c.213C>A synonymous_variant 0.65 streptomycin
rpsL 781808 c.249C>T synonymous_variant 0.62 streptomycin
rpsL 781811 c.252C>T synonymous_variant 0.65 streptomycin
rpsL 781832 c.273T>C synonymous_variant 0.63 streptomycin
rpsL 781838 c.279G>C synonymous_variant 0.58 streptomycin
rpsL 781841 c.282C>G synonymous_variant 0.56 streptomycin
rpsL 781865 c.306G>C synonymous_variant 0.56 streptomycin
rpsL 781868 c.309T>C synonymous_variant 0.56 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.57 streptomycin
rpsL 781877 c.318T>C synonymous_variant 0.56 streptomycin
rpsL 781892 c.333A>G synonymous_variant 0.62 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.61 streptomycin
rpsL 781916 c.357T>C synonymous_variant 0.59 streptomycin
rpsL 781929 p.Gly124Ser missense_variant 0.61 streptomycin Uncertain significance
rplC 800537 c.-272C>T upstream_gene_variant 0.55 linezolid
rplC 800540 c.-269T>C upstream_gene_variant 0.55 linezolid
rplC 800546 c.-263T>G upstream_gene_variant 0.58 linezolid
rplC 800567 c.-242A>G upstream_gene_variant 0.57 linezolid
rplC 800582 c.-227C>G upstream_gene_variant 0.53 linezolid
rplC 800612 c.-197A>G upstream_gene_variant 0.51 linezolid
rplC 800618 c.-191T>C upstream_gene_variant 0.5 linezolid
rplC 800627 c.-182C>T upstream_gene_variant 0.49 linezolid
rplC 800648 c.-161A>T upstream_gene_variant 0.4 linezolid
rplC 800654 c.-155T>C upstream_gene_variant 0.38 linezolid
rplC 800693 c.-116A>G upstream_gene_variant 0.49 linezolid
rplC 800703 c.-106T>C upstream_gene_variant 0.53 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 0.54 linezolid
rplC 800720 c.-89T>C upstream_gene_variant 0.53 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 0.53 linezolid
rplC 800747 c.-62C>G upstream_gene_variant 0.57 linezolid
rplC 800771 c.-38C>T upstream_gene_variant 0.61 linezolid
rplC 800794 c.-15A>G upstream_gene_variant 0.48 linezolid
rplC 800796 c.-13A>G upstream_gene_variant 0.47 linezolid
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.49 linezolid
rplC 800814 c.6A>G synonymous_variant 0.58 linezolid
rplC 800817 c.9A>T synonymous_variant 0.59 linezolid
rplC 800844 c.36T>C synonymous_variant 0.61 linezolid
rplC 800865 c.57A>G synonymous_variant 0.45 linezolid
rplC 800867 p.Ser20Asn missense_variant 0.45 linezolid
rplC 800874 c.66A>G synonymous_variant 0.4 linezolid
rplC 800875 p.Val23Ile missense_variant 0.4 linezolid
rplC 800880 c.72A>G synonymous_variant 0.39 linezolid
rplC 800889 c.81C>G synonymous_variant 0.44 linezolid
rplC 800892 c.84G>C synonymous_variant 0.42 linezolid
rplC 800907 c.99C>G synonymous_variant 0.42 linezolid
rplC 800916 c.108A>G synonymous_variant 0.45 linezolid
rplC 801147 c.339T>C synonymous_variant 0.47 linezolid
rplC 801150 c.342G>C synonymous_variant 0.39 linezolid
rplC 801153 c.345G>C synonymous_variant 0.37 linezolid
rplC 801156 c.348T>A synonymous_variant 0.39 linezolid
rplC 801168 c.360C>G synonymous_variant 0.39 linezolid
rplC 801171 c.363A>G synonymous_variant 0.39 linezolid
rplC 801174 c.366T>C synonymous_variant 0.38 linezolid
rplC 801195 c.387G>C synonymous_variant 0.41 linezolid
rplC 801207 c.399C>T synonymous_variant 0.4 linezolid
rplC 801246 c.438C>T synonymous_variant 0.33 linezolid
rplC 801249 c.441T>C synonymous_variant 0.33 linezolid
rplC 801255 c.447C>T synonymous_variant 0.36 linezolid
rplC 801264 c.456C>T synonymous_variant 0.31 linezolid
rplC 801267 c.459A>T synonymous_variant 0.32 linezolid
rplC 801270 c.462T>C synonymous_variant 0.32 linezolid
rplC 801276 c.468G>C synonymous_variant 0.31 linezolid
rplC 801279 c.471G>C synonymous_variant 0.31 linezolid
rplC 801282 c.474G>C synonymous_variant 0.31 linezolid
rplC 801285 c.477G>C synonymous_variant 0.31 linezolid
rplC 801300 c.492C>G synonymous_variant 0.34 linezolid
rplC 801309 c.501C>G synonymous_variant 0.33 linezolid
rplC 801312 c.504G>C synonymous_variant 0.31 linezolid
rplC 801321 c.513C>T synonymous_variant 0.36 linezolid Not assoc w R - Interim
rplC 801324 c.516T>C synonymous_variant 0.39 linezolid
rplC 801339 c.531T>C synonymous_variant 0.37 linezolid
rplC 801341 p.Leu178Gln missense_variant 0.38 linezolid
rplC 801348 c.540T>G synonymous_variant 0.41 linezolid
rplC 801357 c.549T>C synonymous_variant 0.46 linezolid
rplC 801367 p.Ala187Thr missense_variant 0.59 linezolid
rplC 801402 c.594T>C synonymous_variant 0.55 linezolid
rplC 801405 c.597T>C synonymous_variant 0.53 linezolid
rplC 801423 c.615G>C synonymous_variant 0.47 linezolid
rplC 801426 c.618C>G synonymous_variant 0.44 linezolid
rplC 801427 p.Met207Val missense_variant 0.45 linezolid
rplC 801438 c.630T>C synonymous_variant 0.45 linezolid
rplC 801442 p.Ile212Val missense_variant 0.47 linezolid
Rv1129c 1254562 c.-28T>C upstream_gene_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
isoniazid Not assoc w R
rifampicin Not assoc w R
fbiC 1303489 c.559C>T synonymous_variant 0.42 pretomanid
delamanid
clofazimine
fbiC 1303497 c.567G>A synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1303501 c.571C>T synonymous_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1303509 c.579G>C synonymous_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1303512 c.582T>C synonymous_variant 0.6 pretomanid
delamanid
clofazimine
fbiC 1303521 c.591C>T synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303530 c.600G>A synonymous_variant 0.59 pretomanid
delamanid
clofazimine
fbiC 1303534 p.Ser202Ala missense_variant 0.59 pretomanid
delamanid
clofazimine
fbiC 1303539 c.609G>C synonymous_variant 0.57 pretomanid
delamanid
clofazimine
fbiC 1303545 c.615A>G synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303575 c.645G>C synonymous_variant 0.52 pretomanid
delamanid
clofazimine
fbiC 1303590 c.660A>G synonymous_variant 0.5 pretomanid
delamanid
clofazimine
fbiC 1303632 c.702T>G synonymous_variant 0.52 pretomanid
delamanid
clofazimine
fbiC 1303641 c.711C>T synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fbiC 1303650 c.720G>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1303654 c.724C>T synonymous_variant 0.38 pretomanid
delamanid
clofazimine
fbiC 1303659 c.729T>C synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fbiC 1303661 p.Val244Ala missense_variant 0.39 pretomanid
delamanid
clofazimine
fbiC 1303663 c.733C>T synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fbiC 1303671 c.741C>T synonymous_variant 0.45 pretomanid
delamanid
clofazimine Not assoc w R - Interim
fbiC 1303674 c.744C>G synonymous_variant 0.47 pretomanid
delamanid
clofazimine
fbiC 1303681 c.751T>C synonymous_variant 0.48 pretomanid
delamanid
clofazimine
fbiC 1303686 c.756C>G synonymous_variant 0.49 pretomanid
delamanid
clofazimine
fbiC 1303695 c.765T>C synonymous_variant 0.53 pretomanid
delamanid
clofazimine
fbiC 1303704 c.774T>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303708 c.778T>C synonymous_variant 0.58 pretomanid
delamanid
clofazimine
fbiC 1303728 c.798G>A synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303731 c.801A>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1303732 p.Ser268Ala missense_variant 0.45 pretomanid
delamanid
clofazimine
fbiC 1303737 c.807G>A synonymous_variant 0.5 pretomanid
delamanid
clofazimine
fbiC 1303746 c.816T>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303749 c.819G>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1303752 c.822A>G synonymous_variant 0.58 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fbiC 1303755 c.825T>C synonymous_variant 0.58 pretomanid
delamanid
clofazimine
fbiC 1303761 c.831T>C synonymous_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1303785 c.855G>C synonymous_variant 0.65 pretomanid
delamanid
clofazimine
fbiC 1303789 p.Ile287Val missense_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1303797 c.867A>G synonymous_variant 0.63 pretomanid
delamanid
clofazimine
fbiC 1303818 c.888C>G synonymous_variant 0.66 pretomanid
delamanid
clofazimine
fbiC 1303836 c.906G>C synonymous_variant 0.72 pretomanid
delamanid
clofazimine
fbiC 1303845 c.915C>G synonymous_variant 0.71 pretomanid
delamanid
clofazimine
fbiC 1303846 p.Phe306Val missense_variant 0.71 pretomanid
delamanid
clofazimine
fbiC 1303854 c.924T>C synonymous_variant 0.71 pretomanid
delamanid
clofazimine
fbiC 1303860 c.930A>C synonymous_variant 0.69 pretomanid
delamanid
clofazimine
fbiC 1303884 c.954T>G synonymous_variant 0.64 pretomanid
delamanid
clofazimine
fbiC 1303905 c.975G>C synonymous_variant 0.65 pretomanid
delamanid
clofazimine
fbiC 1303914 c.984C>G synonymous_variant 0.67 pretomanid
delamanid
clofazimine
fbiC 1303920 c.990C>T synonymous_variant 0.62 pretomanid
delamanid
clofazimine
fbiC 1303944 c.1014G>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1303947 c.1017T>G synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1303948 p.Gly340Arg missense_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1303953 p.Asp341Glu missense_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1303956 c.1026A>G synonymous_variant 0.47 pretomanid
delamanid
clofazimine
fbiC 1303961 p.Arg344Leu missense_variant 0.47 pretomanid
delamanid
clofazimine
fbiC 1303971 c.1041T>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1303980 c.1050G>A synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1303998 c.1068T>G synonymous_variant 0.37 pretomanid
delamanid
clofazimine
fbiC 1304127 c.1197A>G synonymous_variant 0.35 pretomanid
delamanid
clofazimine
fbiC 1304132 p.Ala401Gly missense_variant 0.34 pretomanid
delamanid
clofazimine
fbiC 1304142 c.1212G>C synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fbiC 1304161 p.Arg411Ser missense_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1304169 c.1239T>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1304174 p.Val415Ala missense_variant 0.49 pretomanid
delamanid
clofazimine
fbiC 1304184 c.1254G>C synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fbiC 1304187 c.1257T>C synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fbiC 1304208 c.1278C>T synonymous_variant 0.38 pretomanid
delamanid
clofazimine
fbiC 1304511 c.1581C>G synonymous_variant 0.54 pretomanid
delamanid
clofazimine
fbiC 1304526 c.1596T>G synonymous_variant 0.57 pretomanid
delamanid
clofazimine
fbiC 1304535 c.1605G>A synonymous_variant 0.58 pretomanid
delamanid
clofazimine
fbiC 1304544 c.1614T>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1304545 p.Val539Thr missense_variant 0.55 pretomanid
delamanid
clofazimine
fbiC 1304553 c.1623C>T synonymous_variant 0.57 pretomanid
delamanid
clofazimine
fbiC 1304559 p.Glu543Asp missense_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1304565 c.1635C>G synonymous_variant 0.52 pretomanid
delamanid
clofazimine
fbiC 1304568 c.1638T>C synonymous_variant 0.54 pretomanid
delamanid
clofazimine
fbiC 1304580 c.1650T>C synonymous_variant 0.52 pretomanid
delamanid
clofazimine
fbiC 1304613 c.1683T>C synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fbiC 1304634 c.1704C>G synonymous_variant 0.37 pretomanid
delamanid
clofazimine
fbiC 1304640 c.1710A>C synonymous_variant 0.38 pretomanid
delamanid
clofazimine
fbiC 1304646 c.1716T>C synonymous_variant 0.34 pretomanid
delamanid
clofazimine
fbiC 1304658 c.1728C>G synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1304661 c.1731C>T synonymous_variant 0.34 pretomanid
delamanid
clofazimine
fbiC 1304670 c.1740G>C synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fbiC 1304671 p.Val581Thr missense_variant 0.26 pretomanid
delamanid
clofazimine
fbiC 1304675 p.Gly582Asp missense_variant 0.26 pretomanid
delamanid
clofazimine
fbiC 1304691 c.1761G>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1304694 c.1764A>C synonymous_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1304703 c.1773C>G synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1304711 p.Ala594Glu missense_variant 0.41 pretomanid
delamanid
clofazimine
fbiC 1304715 c.1785G>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1304724 c.1794A>G synonymous_variant 0.39 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fbiC 1304727 c.1797A>G synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1304739 c.1809C>T synonymous_variant 0.47 pretomanid
delamanid
clofazimine
fbiC 1304742 c.1812T>C synonymous_variant 0.49 pretomanid
delamanid
clofazimine
fbiC 1304757 c.1827A>G synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1304778 c.1848T>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1304784 c.1854T>C synonymous_variant 0.56 pretomanid
delamanid
clofazimine
fbiC 1304787 c.1857T>G synonymous_variant 0.59 pretomanid
delamanid
clofazimine
fbiC 1304808 c.1878C>G synonymous_variant 0.59 pretomanid
delamanid
clofazimine
fbiC 1304811 c.1881C>G synonymous_variant 0.59 pretomanid
delamanid
clofazimine
fbiC 1304817 c.1887T>C synonymous_variant 0.65 pretomanid
delamanid
clofazimine
fbiC 1304829 c.1899T>C synonymous_variant 0.72 pretomanid
delamanid
clofazimine
fbiC 1304832 c.1902C>T synonymous_variant 0.78 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fbiC 1304856 c.1926C>G synonymous_variant 0.9 pretomanid
delamanid
clofazimine
fbiC 1304862 c.1932G>A synonymous_variant 0.76 pretomanid
delamanid
clofazimine
fbiC 1304869 c.1939C>T synonymous_variant 0.74 pretomanid
delamanid
clofazimine
fbiC 1304875 p.Ile649Val missense_variant 0.71 pretomanid
delamanid
clofazimine
fbiC 1304883 p.Glu651Asp missense_variant 0.66 pretomanid
delamanid
clofazimine
fbiC 1304891 p.Ile654Thr missense_variant 0.65 pretomanid
delamanid
clofazimine
fbiC 1304893 p.Gly655Ser missense_variant 0.65 pretomanid
delamanid
clofazimine
fbiC 1304907 c.1977C>G synonymous_variant 0.64 pretomanid
delamanid
clofazimine
fbiC 1304910 c.1980G>C synonymous_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1304916 c.1986T>C synonymous_variant 0.62 pretomanid
delamanid
clofazimine
fbiC 1304928 c.1998T>C synonymous_variant 0.64 pretomanid
delamanid
clofazimine
fbiC 1304937 c.2007G>C synonymous_variant 0.66 pretomanid
delamanid
clofazimine
fbiC 1304958 c.2028T>G synonymous_variant 0.61 pretomanid
delamanid
clofazimine
fbiC 1304983 c.2053C>T synonymous_variant 0.58 pretomanid
delamanid
clofazimine
fbiC 1304994 c.2064A>G synonymous_variant 0.49 pretomanid
delamanid
clofazimine
fbiC 1304995 p.Leu689Met missense_variant 0.49 pretomanid
delamanid
clofazimine
fbiC 1305006 c.2076A>G synonymous_variant 0.47 pretomanid
delamanid
clofazimine
fbiC 1305012 c.2082G>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fbiC 1305015 c.2085G>C synonymous_variant 0.44 pretomanid
delamanid
clofazimine
fbiC 1305021 c.2091C>G synonymous_variant 0.36 pretomanid
delamanid
clofazimine
fbiC 1305030 c.2100G>C synonymous_variant 0.31 pretomanid
delamanid
clofazimine
fbiC 1305033 c.2103T>G synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1305042 c.2112A>G synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fbiC 1305045 c.2115A>G synonymous_variant 0.26 pretomanid
delamanid
clofazimine
sigE 1364856 c.444C>G synonymous_variant 0.37 pyrazinamide
sigE 1364862 c.450C>A synonymous_variant 0.37 pyrazinamide
sigE 1364865 c.453G>C synonymous_variant 0.41 pyrazinamide
sigE 1364868 c.456T>G synonymous_variant 0.41 pyrazinamide
sigE 1364887 c.475_477delTTAinsCTG synonymous_variant 0.39 pyrazinamide
sigE 1364898 c.486C>T synonymous_variant 0.38 pyrazinamide
sigE 1364904 p.Asp164Glu missense_variant 0.32 pyrazinamide
sigE 1364919 c.507T>C synonymous_variant 0.28 pyrazinamide
sigE 1364943 c.531C>T synonymous_variant 0.24 pyrazinamide
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0 streptomycin Uncertain significance
pyrazinamide Uncertain significance
isoniazid Uncertain significance
atpE 1460831 c.-214T>C upstream_gene_variant 0.3 bedaquiline
atpE 1460840 c.-205A>G upstream_gene_variant 0.3 bedaquiline
atpE 1460852 c.-193C>G upstream_gene_variant 0.29 bedaquiline
atpE 1460855 c.-190T>C upstream_gene_variant 0.29 bedaquiline
atpE 1460858 c.-187C>G upstream_gene_variant 0.27 bedaquiline
atpE 1460861 c.-184C>G upstream_gene_variant 0.3 bedaquiline
atpE 1461132 p.Val30Ile missense_variant 0.28 bedaquiline
atpE 1461149 c.105T>G synonymous_variant 0.29 bedaquiline
atpE 1461150 p.Ile36Val missense_variant 0.29 bedaquiline
atpE 1461158 c.114T>G synonymous_variant 0.31 bedaquiline
atpE 1461159 p.Val39Ile missense_variant 0.31 bedaquiline Uncertain significance
atpE 1461170 c.126A>G synonymous_variant 0.34 bedaquiline
atpE 1461185 c.141G>T synonymous_variant 0.39 bedaquiline
atpE 1461197 c.153A>G synonymous_variant 0.45 bedaquiline
atpE 1461219 c.175T>C synonymous_variant 0.48 bedaquiline
atpE 1461233 c.189A>C synonymous_variant 0.36 bedaquiline
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.38 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.47 capreomycin Uncertain significance
linezolid
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.4 capreomycin
linezolid
inhA 1673664 c.-538A>C upstream_gene_variant 0.33 isoniazid
ethionamide
inhA 1673667 c.-535A>G upstream_gene_variant 0.33 isoniazid
ethionamide
inhA 1673679 c.-523T>C upstream_gene_variant 0.42 isoniazid Uncertain significance
ethionamide Uncertain significance
inhA 1673685 c.-517C>T upstream_gene_variant 0.44 isoniazid
ethionamide
inhA 1673710 c.-492C>A upstream_gene_variant 0.53 isoniazid
ethionamide
inhA 1673716 c.-486_-485delGCinsAA upstream_gene_variant 0.53 isoniazid
ethionamide
inhA 1673733 c.-469G>C upstream_gene_variant 0.52 isoniazid
ethionamide
inhA 1673748 c.-454A>G upstream_gene_variant 0.32 isoniazid
ethionamide
inhA 1673749 c.-453_-452delAAinsCG upstream_gene_variant 0.32 isoniazid
ethionamide
inhA 1673758 c.-444A>G upstream_gene_variant 0.31 isoniazid
ethionamide
inhA 1673890 c.-312G>T upstream_gene_variant 0.38 isoniazid
ethionamide
inhA 1673901 c.-301A>G upstream_gene_variant 0.35 isoniazid
ethionamide
inhA 1673905 c.-297T>G upstream_gene_variant 0.33 isoniazid
ethionamide
inhA 1673916 c.-286A>C upstream_gene_variant 0.41 isoniazid
ethionamide
inhA 1673917 c.-285G>C upstream_gene_variant 0.42 isoniazid
ethionamide
inhA 1673922 c.-280T>C upstream_gene_variant 0.41 isoniazid
ethionamide
inhA 1673941 c.-261G>T upstream_gene_variant 0.45 isoniazid
ethionamide
inhA 1673955 c.-247G>C upstream_gene_variant 0.49 isoniazid
ethionamide
inhA 1673961 c.-241A>C upstream_gene_variant 0.41 isoniazid
ethionamide
inhA 1673985 c.-217C>G upstream_gene_variant 0.34 isoniazid
ethionamide
inhA 1674063 c.-139G>C upstream_gene_variant 0.21 isoniazid
ethionamide
inhA 1674105 c.-97C>T upstream_gene_variant 0.34 isoniazid
ethionamide
inhA 1674114 c.-88T>A upstream_gene_variant 0.3 isoniazid Uncertain significance
ethionamide Uncertain significance
inhA 1674123 c.-79T>C upstream_gene_variant 0.3 isoniazid
ethionamide
inhA 1674126 c.-76G>C upstream_gene_variant 0.3 isoniazid
ethionamide
inhA 1674132 c.-70T>C upstream_gene_variant 0.29 isoniazid
ethionamide
inhA 1674136 c.-66T>G upstream_gene_variant 0.34 isoniazid
ethionamide
inhA 1674141 c.-61T>C upstream_gene_variant 0.3 isoniazid
ethionamide
inhA 1674504 c.303C>G synonymous_variant 0.34 isoniazid
ethionamide
inhA 1674507 c.306G>C synonymous_variant 0.37 isoniazid
ethionamide
inhA 1674537 c.336C>G synonymous_variant 0.47 isoniazid
ethionamide
inhA 1674542 p.Ala114Glu missense_variant 0.41 isoniazid
ethionamide
inhA 1674546 c.345T>C synonymous_variant 0.4 isoniazid
ethionamide
inhA 1674549 c.348G>C synonymous_variant 0.4 isoniazid
ethionamide
inhA 1674555 c.354G>A synonymous_variant 0.39 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
inhA 1674561 c.360C>T synonymous_variant 0.4 isoniazid
ethionamide
inhA 1674582 c.381T>C synonymous_variant 0.32 isoniazid
ethionamide
inhA 1674585 c.384T>C synonymous_variant 0.31 isoniazid
ethionamide
inhA 1674589 p.Met130Leu missense_variant 0.33 isoniazid
ethionamide
inhA 1674601 p.Leu134Thr missense_variant 0.33 isoniazid
ethionamide
inhA 1674624 c.423A>C synonymous_variant 0.36 isoniazid
ethionamide
inhA 1674660 c.459G>C synonymous_variant 0.41 isoniazid
ethionamide
inhA 1674672 c.471C>G synonymous_variant 0.4 isoniazid
ethionamide
inhA 1674703 c.502T>C synonymous_variant 0.45 isoniazid
ethionamide
inhA 1674708 c.507G>A synonymous_variant 0.47 isoniazid
ethionamide
inhA 1674718 c.517A>C synonymous_variant 0.48 isoniazid
ethionamide
inhA 1674738 c.537C>G synonymous_variant 0.46 isoniazid
ethionamide
inhA 1674741 c.540C>T synonymous_variant 0.43 isoniazid Not assoc w R - Interim
ethionamide
inhA 1674746 p.Tyr182Phe missense_variant 0.45 isoniazid
ethionamide
inhA 1674750 c.549T>C synonymous_variant 0.44 isoniazid
ethionamide
inhA 1674753 c.552G>C synonymous_variant 0.44 isoniazid
ethionamide
inhA 1674756 c.555T>C synonymous_variant 0.47 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
inhA 1674759 c.558G>C synonymous_variant 0.48 isoniazid
ethionamide
inhA 1674774 c.573A>G synonymous_variant 0.59 isoniazid
ethionamide
inhA 1674780 c.579T>G synonymous_variant 0.57 isoniazid
ethionamide
inhA 1674789 c.588G>C synonymous_variant 0.6 isoniazid
ethionamide
inhA 1674801 c.600T>C synonymous_variant 0.53 isoniazid
ethionamide
inhA 1674816 c.615T>C synonymous_variant 0.56 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
inhA 1674822 c.621C>G synonymous_variant 0.5 isoniazid
ethionamide
inhA 1674828 c.627G>A synonymous_variant 0.47 isoniazid
ethionamide
inhA 1674846 p.Ile215Met missense_variant 0.53 isoniazid
ethionamide
inhA 1674864 c.663C>T synonymous_variant 0.51 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
inhA 1674870 c.669T>C synonymous_variant 0.52 isoniazid
ethionamide
inhA 1674879 c.678T>C synonymous_variant 0.55 isoniazid
ethionamide
inhA 1674888 c.687C>G synonymous_variant 0.52 isoniazid
ethionamide
inhA 1674903 c.702T>C synonymous_variant 0.49 isoniazid
ethionamide
inhA 1674904 p.Ala235Pro missense_variant 0.49 isoniazid
ethionamide
inhA 1674942 c.741T>G synonymous_variant 0.36 isoniazid
ethionamide
inhA 1674954 c.753G>C synonymous_variant 0.29 isoniazid
ethionamide
rpsA 1833532 c.-10A>C upstream_gene_variant 0.34 pyrazinamide
rpsA 1833554 p.Thr5Ala missense_variant 0.43 pyrazinamide Uncertain significance
rpsA 1833568 c.27G>C synonymous_variant 0.49 pyrazinamide Not assoc w R - Interim
rpsA 1833589 c.48A>T synonymous_variant 0.62 pyrazinamide
rpsA 1833595 c.54T>C synonymous_variant 0.64 pyrazinamide
rpsA 1833661 c.120A>G synonymous_variant 0.61 pyrazinamide
rpsA 1833667 c.126C>G synonymous_variant 0.66 pyrazinamide
rpsA 1833721 c.180A>G synonymous_variant 0.59 pyrazinamide
rpsA 1833724 c.183C>G synonymous_variant 0.59 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 0.6 pyrazinamide
rpsA 1833742 c.201A>G synonymous_variant 0.63 pyrazinamide
rpsA 1833745 c.204G>C synonymous_variant 0.61 pyrazinamide
rpsA 1833748 c.207C>G synonymous_variant 0.62 pyrazinamide
rpsA 1833787 c.246C>G synonymous_variant 0.61 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 0.61 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 0.62 pyrazinamide
rpsA 1833811 c.270G>T synonymous_variant 0.65 pyrazinamide
rpsA 1833838 c.297G>C synonymous_variant 0.58 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 0.6 pyrazinamide
rpsA 1833847 c.306C>G synonymous_variant 0.59 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 0.59 pyrazinamide
rpsA 1833874 c.333T>C synonymous_variant 0.6 pyrazinamide
rpsA 1833886 c.345C>G synonymous_variant 0.59 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 0.6 pyrazinamide
rpsA 1833940 c.399C>G synonymous_variant 0.61 pyrazinamide
rpsA 1833971 c.430C>T synonymous_variant 0.73 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 0.7 pyrazinamide
rpsA 1834000 c.459G>C synonymous_variant 0.69 pyrazinamide
rpsA 1834021 c.480C>T synonymous_variant 0.67 pyrazinamide
rpsA 1834030 c.489C>G synonymous_variant 0.67 pyrazinamide
rpsA 1834081 c.540C>T synonymous_variant 0.44 pyrazinamide
rpsA 1834096 c.555G>C synonymous_variant 0.35 pyrazinamide
rpsA 1834099 c.558C>G synonymous_variant 0.34 pyrazinamide
rpsA 1834102 c.561T>C synonymous_variant 0.34 pyrazinamide
rpsA 1834105 c.564C>G synonymous_variant 0.35 pyrazinamide
rpsA 1834108 c.567C>G synonymous_variant 0.35 pyrazinamide
rpsA 1834123 c.582C>G synonymous_variant 0.35 pyrazinamide
rpsA 1834177 c.636A>C synonymous_variant 1.0 pyrazinamide Not assoc w R - Interim
rpsA 1834189 c.648G>C synonymous_variant 0.39 pyrazinamide
rpsA 1834195 c.654G>C synonymous_variant 0.43 pyrazinamide
rpsA 1834210 c.669C>T synonymous_variant 0.54 pyrazinamide
rpsA 1834222 c.681T>C synonymous_variant 0.5 pyrazinamide
rpsA 1834231 c.690T>C synonymous_variant 0.48 pyrazinamide
rpsA 1834234 c.693G>C synonymous_variant 0.49 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 0.55 pyrazinamide
rpsA 1834261 c.720A>G synonymous_variant 0.58 pyrazinamide Not assoc w R - Interim
rpsA 1834262 c.721_723delTCGinsAGC synonymous_variant 0.58 pyrazinamide
rpsA 1834303 c.762T>C synonymous_variant 0.47 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.49 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.4 pyrazinamide Not assoc w R - Interim
rpsA 1834366 c.825A>G synonymous_variant 0.47 pyrazinamide Not assoc w R - Interim
rpsA 1834396 c.855G>C synonymous_variant 0.53 pyrazinamide
rpsA 1834411 c.870T>C synonymous_variant 0.55 pyrazinamide
rpsA 1834417 c.876G>C synonymous_variant 0.57 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.6 pyrazinamide
rpsA 1834435 c.894G>C synonymous_variant 0.64 pyrazinamide
rpsA 1834451 c.910T>C synonymous_variant 0.67 pyrazinamide
rpsA 1834465 c.924T>C synonymous_variant 0.66 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 0.65 pyrazinamide
rpsA 1834489 c.948T>C synonymous_variant 0.62 pyrazinamide
rpsA 1834513 c.972C>G synonymous_variant 0.59 pyrazinamide
rpsA 1834528 c.987T>C synonymous_variant 0.59 pyrazinamide
rpsA 1834540 c.999G>C synonymous_variant 0.6 pyrazinamide
rpsA 1834546 c.1005T>C synonymous_variant 0.59 pyrazinamide
rpsA 1834555 c.1014T>G synonymous_variant 0.5 pyrazinamide
rpsA 1834609 c.1068T>C synonymous_variant 0.58 pyrazinamide
rpsA 1834618 c.1077G>C synonymous_variant 0.55 pyrazinamide
rpsA 1834633 c.1092A>G synonymous_variant 0.51 pyrazinamide
rpsA 1834639 c.1098T>C synonymous_variant 0.52 pyrazinamide
rpsA 1834654 p.Glu371Asp missense_variant 0.62 pyrazinamide
rpsA 1834690 c.1149T>C synonymous_variant 0.6 pyrazinamide
rpsA 1834732 c.1191T>C synonymous_variant 0.48 pyrazinamide
rpsA 1834733 p.Ala398Ser missense_variant 0.48 pyrazinamide
rpsA 1834738 c.1197A>G synonymous_variant 0.5 pyrazinamide
rpsA 1834753 c.1212T>C synonymous_variant 0.49 pyrazinamide
rpsA 1834765 p.Glu408Asp missense_variant 0.53 pyrazinamide
rpsA 1834775 p.Ala412Thr missense_variant 0.55 pyrazinamide
rpsA 1834780 c.1239A>G synonymous_variant 0.55 pyrazinamide
rpsA 1834786 c.1245A>G synonymous_variant 0.53 pyrazinamide
rpsA 1834789 c.1248T>C synonymous_variant 0.52 pyrazinamide
rpsA 1834792 c.1251G>C synonymous_variant 0.51 pyrazinamide
tsnR 1853361 c.-245T>C upstream_gene_variant 0.44 linezolid
tsnR 1853370 c.-236_-234delGCAinsTCG upstream_gene_variant 0.4 linezolid
tsnR 1853387 c.-219T>G upstream_gene_variant 0.33 linezolid
tsnR 1853394 c.-212_-211delCTinsGC upstream_gene_variant 0.3 linezolid
tsnR 1853420 c.-186T>G upstream_gene_variant 0.29 linezolid
tsnR 1853423 c.-183C>T upstream_gene_variant 0.29 linezolid
tsnR 1853429 c.-177G>C upstream_gene_variant 0.31 linezolid
tsnR 1853432 c.-174G>C upstream_gene_variant 0.31 linezolid
tsnR 1853447 c.-159C>G upstream_gene_variant 0.29 linezolid
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
tlyA 1917972 c.33A>G synonymous_variant 1.0 capreomycin Not assoc w R
tlyA 1917981 c.42G>C synonymous_variant 0.47 capreomycin
tlyA 1917990 c.51G>C synonymous_variant 0.38 capreomycin
tlyA 1917993 c.54A>G synonymous_variant 0.43 capreomycin Not assoc w R - Interim
tlyA 1917996 c.57A>G synonymous_variant 0.41 capreomycin
tlyA 1918002 c.63A>G synonymous_variant 0.42 capreomycin
tlyA 1918036 p.Arg33Ser missense_variant 0.27 capreomycin
tlyA 1918278 c.339C>G synonymous_variant 0.22 capreomycin
tlyA 1918330 p.Leu131Val missense_variant 0.27 capreomycin
tlyA 1918346 p.Ala136Val missense_variant 0.31 capreomycin
tlyA 1918352 p.Gly138Asp missense_variant 0.28 capreomycin
tlyA 1918356 c.417C>G synonymous_variant 0.28 capreomycin
tlyA 1918359 c.420A>G synonymous_variant 0.27 capreomycin
tlyA 1918362 c.423G>C synonymous_variant 0.27 capreomycin
tlyA 1918377 c.438T>G synonymous_variant 0.23 capreomycin
tlyA 1918422 c.483T>C synonymous_variant 0.32 capreomycin
tlyA 1918425 c.486C>A synonymous_variant 0.3 capreomycin
bacA 2064882 c.-154C>G upstream_gene_variant 0.26 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064892 c.-164A>G upstream_gene_variant 0.3 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064897 c.-169C>G upstream_gene_variant 0.28 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064903 c.-175G>A upstream_gene_variant 0.33 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064912 c.-184A>G upstream_gene_variant 0.36 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064915 c.-187G>C upstream_gene_variant 0.39 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064933 c.-205A>G upstream_gene_variant 0.45 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064936 c.-208C>G upstream_gene_variant 0.45 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064942 c.-214G>A upstream_gene_variant 0.5 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064948 c.-220G>C upstream_gene_variant 0.53 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064972 c.-244T>C upstream_gene_variant 0.6 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064978 c.-250G>C upstream_gene_variant 0.56 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064979 c.-251C>T upstream_gene_variant 0.56 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064984 c.-256A>G upstream_gene_variant 0.54 kanamycin
capreomycin
streptomycin
amikacin
bacA 2064993 c.-265T>C upstream_gene_variant 0.58 kanamycin
capreomycin
streptomycin
amikacin
ndh 2101744 p.Asp433Glu missense_variant 0.32 isoniazid
delamanid
ethionamide
ndh 2101756 c.1287G>C synonymous_variant 0.44 isoniazid
delamanid
ethionamide
ndh 2101765 c.1278C>G synonymous_variant 0.43 isoniazid
delamanid
ethionamide
ndh 2101768 c.1275C>A synonymous_variant 0.38 isoniazid
delamanid
ethionamide
ndh 2101771 c.1272T>G synonymous_variant 0.37 isoniazid Not assoc w R - Interim
delamanid
ethionamide
ndh 2101774 c.1269T>C synonymous_variant 0.37 isoniazid
delamanid
ethionamide
ndh 2101777 c.1266C>G synonymous_variant 0.37 isoniazid Not assoc w R - Interim
delamanid
ethionamide Not assoc w R - Interim
ndh 2101783 c.1260T>G synonymous_variant 0.39 isoniazid
delamanid
ethionamide
ndh 2101804 c.1239T>G synonymous_variant 0.4 isoniazid
delamanid
ethionamide
ndh 2101808 p.Thr412Ser missense_variant 0.35 isoniazid
delamanid
ethionamide
ndh 2101830 p.Ile405Val missense_variant 0.4 isoniazid
delamanid
ethionamide
ndh 2101837 p.Ala402Val missense_variant 0.29 isoniazid Uncertain significance
delamanid
ethionamide Uncertain significance
ndh 2101912 c.1131G>C synonymous_variant 0.23 isoniazid
delamanid
ethionamide
ndh 2101920 c.1123A>C synonymous_variant 0.23 isoniazid
delamanid
ethionamide
ndh 2101924 c.1119T>G synonymous_variant 0.28 isoniazid
delamanid
ethionamide
ndh 2101939 c.1104A>G synonymous_variant 0.43 isoniazid
delamanid
ethionamide
ndh 2101960 c.1083A>G synonymous_variant 0.45 isoniazid
delamanid
ethionamide
ndh 2101963 c.1080G>A synonymous_variant 0.48 isoniazid Not assoc w R - Interim
delamanid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
ndh 2101966 c.1077T>G synonymous_variant 0.48 isoniazid
delamanid
ethionamide
ndh 2101972 c.1071G>C synonymous_variant 0.49 isoniazid
delamanid
ethionamide
ndh 2101988 p.Ala352Asp missense_variant 0.47 isoniazid
delamanid
ethionamide
ndh 2101990 c.1053G>C synonymous_variant 0.47 isoniazid
delamanid
ethionamide
ndh 2101993 c.1050A>G synonymous_variant 0.45 isoniazid
delamanid
ethionamide
ndh 2102014 c.1029C>G synonymous_variant 0.38 isoniazid
delamanid
ethionamide
ndh 2102212 c.831G>C synonymous_variant 0.33 isoniazid
delamanid
ethionamide
ndh 2102218 c.825C>A synonymous_variant 0.43 isoniazid
delamanid
ethionamide
ndh 2102227 c.816C>T synonymous_variant 0.46 isoniazid
delamanid
ethionamide
ndh 2102230 c.813G>C synonymous_variant 0.5 isoniazid
delamanid
ethionamide
ndh 2102233 c.810G>A synonymous_variant 0.46 isoniazid Not assoc w R - Interim
delamanid
ethionamide Not assoc w R - Interim
katG 2154724 p.Arg463Leu missense_variant 1.0 isoniazid Not assoc w R
katG 2155637 p.Leu159Ile missense_variant 0.21 isoniazid
katG 2155641 p.Lys157Asn missense_variant 0.23 isoniazid Uncertain significance
katG 2155661 p.Val151Ile missense_variant 0.25 isoniazid
katG 2155680 c.432G>C synonymous_variant 0.4 isoniazid
katG 2155691 c.421T>C synonymous_variant 0.41 isoniazid
katG 2155695 c.417C>G synonymous_variant 0.47 isoniazid
katG 2155704 c.408C>G synonymous_variant 0.51 isoniazid
katG 2155716 c.396T>G synonymous_variant 0.52 isoniazid
katG 2155722 c.390G>C synonymous_variant 0.57 isoniazid
katG 2155728 c.384G>C synonymous_variant 0.54 isoniazid
katG 2155740 p.Gly124Gln missense_variant 0.55 isoniazid
katG 2155743 c.369G>C synonymous_variant 0.53 isoniazid
katG 2155782 c.330C>G synonymous_variant 0.38 isoniazid
katG 2155785 c.327T>C synonymous_variant 0.39 isoniazid
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
pncA 2289925 c.-684T>C upstream_gene_variant 0.26 pyrazinamide
pncA 2289930 c.-689A>G upstream_gene_variant 0.26 pyrazinamide
pncA 2289943 c.-702T>G upstream_gene_variant 0.26 pyrazinamide
pncA 2289948 c.-707C>T upstream_gene_variant 0.26 pyrazinamide
pncA 2289949 c.-708A>G upstream_gene_variant 0.26 pyrazinamide
pncA 2290000 c.-759C>T upstream_gene_variant 0.25 pyrazinamide
pncA 2290009 c.-768A>C upstream_gene_variant 0.43 pyrazinamide
pncA 2290015 c.-774A>C upstream_gene_variant 0.4 pyrazinamide
pncA 2290024 c.-783C>G upstream_gene_variant 0.44 pyrazinamide
pncA 2290030 c.-791_-789delAATinsCAC upstream_gene_variant 0.44 pyrazinamide
pncA 2290033 c.-792C>G upstream_gene_variant 0.43 pyrazinamide
pncA 2290038 c.-797G>A upstream_gene_variant 0.43 pyrazinamide
pncA 2290042 c.-801T>C upstream_gene_variant 0.43 pyrazinamide
pncA 2290069 c.-830_-828delAGCinsGGA upstream_gene_variant 0.39 pyrazinamide
pncA 2290072 c.-831T>C upstream_gene_variant 0.36 pyrazinamide
pncA 2290075 c.-834C>G upstream_gene_variant 0.35 pyrazinamide
pncA 2290084 c.-843T>C upstream_gene_variant 0.35 pyrazinamide
pncA 2290087 c.-846T>C upstream_gene_variant 0.34 pyrazinamide
kasA 2517950 c.-165C>G upstream_gene_variant 0.58 isoniazid
kasA 2517989 c.-126T>C upstream_gene_variant 0.64 isoniazid
kasA 2517993 c.-122G>T upstream_gene_variant 0.65 isoniazid
kasA 2518162 c.48G>A synonymous_variant 0.47 isoniazid
kasA 2518174 c.60A>G synonymous_variant 0.48 isoniazid
kasA 2518190 p.Ser26Ala missense_variant 0.56 isoniazid
kasA 2518199 p.Ile29Val missense_variant 0.55 isoniazid
kasA 2518220 c.106C>T synonymous_variant 0.47 isoniazid
kasA 2518234 c.120G>A synonymous_variant 0.38 isoniazid
kasA 2518248 p.Ala45Val missense_variant 0.27 isoniazid
kasA 2518429 c.315A>C synonymous_variant 0.3 isoniazid
kasA 2518439 p.Ala109Ser missense_variant 0.39 isoniazid
kasA 2518444 c.330T>C synonymous_variant 0.43 isoniazid
kasA 2518447 c.333T>G synonymous_variant 0.46 isoniazid
kasA 2518459 c.345T>C synonymous_variant 0.43 isoniazid
kasA 2518462 c.348A>C synonymous_variant 0.43 isoniazid
kasA 2518468 c.354A>C synonymous_variant 0.52 isoniazid
kasA 2518474 c.360G>A synonymous_variant 0.47 isoniazid
kasA 2518480 c.366T>C synonymous_variant 0.47 isoniazid
kasA 2518483 c.369C>G synonymous_variant 0.45 isoniazid
kasA 2518504 c.390T>C synonymous_variant 0.45 isoniazid
kasA 2518506 p.Ala131Glu missense_variant 0.45 isoniazid
kasA 2518519 c.405G>C synonymous_variant 0.43 isoniazid
kasA 2518528 c.414C>G synonymous_variant 0.45 isoniazid
kasA 2518540 c.426T>C synonymous_variant 0.42 isoniazid
kasA 2518561 c.447T>C synonymous_variant 0.41 isoniazid
kasA 2518567 c.453G>C synonymous_variant 0.41 isoniazid
kasA 2518570 c.456G>C synonymous_variant 0.42 isoniazid
kasA 2518574 p.Ile154Val missense_variant 0.45 isoniazid
kasA 2518579 c.465T>C synonymous_variant 0.42 isoniazid
kasA 2518588 c.474T>C synonymous_variant 0.42 isoniazid
kasA 2518591 c.477G>C synonymous_variant 0.42 isoniazid
kasA 2518609 p.Met165Ile missense_variant 0.42 isoniazid
kasA 2518639 c.525G>C synonymous_variant 0.37 isoniazid
kasA 2518672 c.558G>C synonymous_variant 0.29 isoniazid
kasA 2518678 c.564C>T synonymous_variant 0.3 isoniazid
kasA 2518684 c.570C>G synonymous_variant 0.29 isoniazid
kasA 2518693 c.579C>G synonymous_variant 0.3 isoniazid
kasA 2518696 c.582C>G synonymous_variant 0.36 isoniazid
kasA 2518702 c.588C>T synonymous_variant 0.39 isoniazid
kasA 2518705 c.591T>C synonymous_variant 0.38 isoniazid
kasA 2518711 c.597A>G synonymous_variant 0.38 isoniazid
kasA 2518714 c.600A>C synonymous_variant 0.39 isoniazid
kasA 2518732 c.618C>G synonymous_variant 0.49 isoniazid
kasA 2518744 c.630C>T synonymous_variant 0.49 isoniazid
kasA 2518747 c.633C>G synonymous_variant 0.5 isoniazid
kasA 2518768 c.654C>T synonymous_variant 0.61 isoniazid
kasA 2518777 c.663C>T synonymous_variant 0.6 isoniazid
kasA 2518783 c.669T>C synonymous_variant 0.6 isoniazid
kasA 2518789 c.675G>C synonymous_variant 0.55 isoniazid
kasA 2518792 c.678C>A synonymous_variant 0.55 isoniazid
kasA 2518795 c.681C>G synonymous_variant 0.53 isoniazid
kasA 2518825 c.711T>C synonymous_variant 0.55 isoniazid
kasA 2518864 c.750G>C synonymous_variant 0.44 isoniazid
kasA 2518879 c.765A>G synonymous_variant 0.39 isoniazid
kasA 2518885 c.771T>C synonymous_variant 0.4 isoniazid
kasA 2518898 c.784T>C synonymous_variant 0.37 isoniazid
kasA 2518906 c.792A>G synonymous_variant 0.29 isoniazid
kasA 2518910 p.Leu266Met missense_variant 0.3 isoniazid
kasA 2518927 c.813C>G synonymous_variant 0.3 isoniazid
kasA 2518936 c.822C>G synonymous_variant 0.25 isoniazid
kasA 2518990 c.876T>G synonymous_variant 0.47 isoniazid
kasA 2518993 c.879C>G synonymous_variant 0.5 isoniazid
kasA 2518999 c.885G>A synonymous_variant 0.5 isoniazid
kasA 2519008 c.894C>G synonymous_variant 0.47 isoniazid
kasA 2519068 c.954C>T synonymous_variant 0.7 isoniazid
kasA 2519072 p.Ala320Thr missense_variant 0.73 isoniazid
kasA 2519107 c.993T>C synonymous_variant 0.61 isoniazid
kasA 2519108 p.Asp332Gln missense_variant 0.61 isoniazid
kasA 2519116 c.1002C>G synonymous_variant 0.62 isoniazid
kasA 2519122 c.1008G>C synonymous_variant 0.65 isoniazid
kasA 2519137 c.1023T>G synonymous_variant 0.6 isoniazid
kasA 2519158 c.1044C>T synonymous_variant 0.52 isoniazid
ahpC 2726303 c.111T>C synonymous_variant 0.21 isoniazid
ahpC 2726564 c.372C>G synonymous_variant 0.24 isoniazid Not assoc w R - Interim
ahpC 2726579 c.387T>C synonymous_variant 0.34 isoniazid
ahpC 2726591 c.399C>G synonymous_variant 0.34 isoniazid
ahpC 2726593 p.Val134Ala missense_variant 0.34 isoniazid
ahpC 2726600 c.408T>C synonymous_variant 0.35 isoniazid
ahpC 2726601 p.Ile137Leu missense_variant 0.35 isoniazid
ahpC 2726638 p.Ala149Val missense_variant 0.4 isoniazid
ahpC 2726645 c.453C>G synonymous_variant 0.45 isoniazid
ahpC 2726657 c.465A>C synonymous_variant 0.5 isoniazid Not assoc w R - Interim
ahpC 2726669 p.Asp159Glu missense_variant 0.46 isoniazid
ahpC 2726672 c.480G>A synonymous_variant 0.47 isoniazid Not assoc w R - Interim
ahpC 2726675 c.483A>G synonymous_variant 0.47 isoniazid
ahpC 2726681 c.489A>C synonymous_variant 0.47 isoniazid Not assoc w R - Interim
ahpC 2726693 c.501C>G synonymous_variant 0.42 isoniazid
ahpC 2726696 c.504C>G synonymous_variant 0.41 isoniazid
ahpC 2726717 c.525A>G synonymous_variant 0.38 isoniazid
folC 2746375 c.1224G>C synonymous_variant 0.35 para-aminosalicylic_acid
folC 2746390 c.1209G>C synonymous_variant 0.24 para-aminosalicylic_acid
folC 2746468 c.1131G>C synonymous_variant 0.22 para-aminosalicylic_acid
folC 2746525 c.1074G>T synonymous_variant 0.19 para-aminosalicylic_acid
folC 2746651 c.948T>C synonymous_variant 0.28 para-aminosalicylic_acid
folC 2746657 c.942T>C synonymous_variant 0.26 para-aminosalicylic_acid
folC 2746663 c.936T>C synonymous_variant 0.25 para-aminosalicylic_acid
folC 2746677 p.Ser308Ala missense_variant 0.24 para-aminosalicylic_acid
folC 2746678 c.921T>C synonymous_variant 0.24 para-aminosalicylic_acid
folC 2746681 c.918C>G synonymous_variant 0.24 para-aminosalicylic_acid
folC 2746684 c.915C>G synonymous_variant 0.24 para-aminosalicylic_acid
folC 2746687 c.912C>G synonymous_variant 0.25 para-aminosalicylic_acid
folC 2746690 p.Val303Ala missense_variant 0.27 para-aminosalicylic_acid
folC 2746696 c.903C>T synonymous_variant 0.29 para-aminosalicylic_acid
folC 2746714 c.885T>A synonymous_variant 0.3 para-aminosalicylic_acid
folC 2747224 c.375G>C synonymous_variant 0.23 para-aminosalicylic_acid
folC 2747233 c.366G>T synonymous_variant 0.3 para-aminosalicylic_acid
folC 2747239 c.360T>C synonymous_variant 0.26 para-aminosalicylic_acid
folC 2747248 c.351G>C synonymous_variant 0.39 para-aminosalicylic_acid
folC 2747264 p.Gly112Ala missense_variant 0.45 para-aminosalicylic_acid
folC 2747266 c.333C>T synonymous_variant 0.47 para-aminosalicylic_acid
folC 2747275 c.324T>C synonymous_variant 0.53 para-aminosalicylic_acid
folC 2747289 p.Pro104Ala missense_variant 0.47 para-aminosalicylic_acid
folC 2747290 c.309A>G synonymous_variant 0.47 para-aminosalicylic_acid
folC 2747293 c.306G>A synonymous_variant 0.49 para-aminosalicylic_acid
folC 2747302 c.297A>C synonymous_variant 0.47 para-aminosalicylic_acid
folC 2747314 c.285A>C synonymous_variant 0.41 para-aminosalicylic_acid
folC 2747317 c.282C>G synonymous_variant 0.41 para-aminosalicylic_acid
folC 2747362 c.237G>C synonymous_variant 0.24 para-aminosalicylic_acid
folC 2747394 p.Ile69Val missense_variant 0.37 para-aminosalicylic_acid
folC 2747395 c.204T>C synonymous_variant 0.36 para-aminosalicylic_acid
folC 2747407 c.192T>C synonymous_variant 0.29 para-aminosalicylic_acid
folC 2747410 c.187_188delAG frameshift_variant 0.3 para-aminosalicylic_acid
folC 2747415 c.184delCinsTTG frameshift_variant&missense_variant 0.32 para-aminosalicylic_acid
folC 2747419 c.180C>G synonymous_variant 0.28 para-aminosalicylic_acid
folC 2747422 c.177G>A synonymous_variant 0.27 para-aminosalicylic_acid
folC 2747425 c.174C>T synonymous_variant 0.25 para-aminosalicylic_acid
folC 2747430 c.169C>T synonymous_variant 0.29 para-aminosalicylic_acid
folC 2747442 c.157T>C synonymous_variant 0.32 para-aminosalicylic_acid
folC 2747745 c.-147A>C upstream_gene_variant 0.42 para-aminosalicylic_acid
folC 2747751 c.-154_-153delGCinsCG upstream_gene_variant 0.4 para-aminosalicylic_acid
folC 2747759 c.-161T>C upstream_gene_variant 0.38 para-aminosalicylic_acid
folC 2747760 c.-162G>T upstream_gene_variant 0.36 para-aminosalicylic_acid
folC 2747772 c.-174C>G upstream_gene_variant 0.39 para-aminosalicylic_acid
folC 2747790 c.-192G>C upstream_gene_variant 0.37 para-aminosalicylic_acid
Rv2477c 2782441 c.1602G>A synonymous_variant 0.43 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782450 c.1593C>A synonymous_variant 0.49 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782453 c.1590C>G synonymous_variant 0.49 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782483 c.1560G>C synonymous_variant 0.66 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782513 c.1530G>C synonymous_variant 0.58 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782522 c.1521G>C synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782525 c.1518C>T synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2782528 c.1515G>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782537 c.1506T>G synonymous_variant 0.47 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782540 c.1503T>C synonymous_variant 0.42 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782546 c.1497C>G synonymous_variant 0.41 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782549 c.1494T>C synonymous_variant 0.41 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2782567 c.1476C>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782695 c.1348A>C synonymous_variant 0.23 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782705 c.1338G>C synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782741 c.1302G>A synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782822 c.1221G>C synonymous_variant 0.23 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782828 c.1215T>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2782841 p.Thr401Asn missense_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782847 p.Arg399Lys missense_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782852 c.1191T>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782861 c.1182T>G synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782864 c.1179T>C synonymous_variant 0.54 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782869 p.Ala392Thr missense_variant 0.55 kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
streptomycin
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin Uncertain significance
Rv2477c 2782876 c.1167G>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782882 c.1161T>C synonymous_variant 0.63 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782912 p.Ser377Thr missense_variant 0.68 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782927 p.Thr372Glu missense_variant 0.54 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782936 c.1107G>T synonymous_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782948 c.1095A>G synonymous_variant 0.63 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782957 c.1086A>G synonymous_variant 0.62 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2782966 c.1077C>A synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782969 c.1074A>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782972 c.1071G>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782981 c.1062G>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782984 c.1059T>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782990 c.1053C>G synonymous_variant 0.63 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783002 c.1041T>C synonymous_variant 0.6 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783008 c.1035C>G synonymous_variant 0.58 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783013 c.1030T>C synonymous_variant 0.6 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783015 p.Ser343Thr missense_variant 0.63 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783035 c.1008G>C synonymous_variant 0.6 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783040 p.Ala335Thr missense_variant 0.57 kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
streptomycin Uncertain significance
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin Uncertain significance
Rv2477c 2783044 c.999G>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783048 p.Asp332Gly missense_variant 0.54 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783059 c.984T>C synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783068 p.Asp325Glu missense_variant 0.6 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783077 c.966T>C synonymous_variant 0.6 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783092 c.951A>G synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783095 c.948C>G synonymous_variant 0.47 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783098 c.945C>G synonymous_variant 0.52 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783101 c.942G>T synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783116 c.927T>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783140 c.903C>G synonymous_variant 0.67 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783146 c.897G>A synonymous_variant 0.57 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin
ethambutol
amikacin Not assoc w R - Interim
Rv2477c 2783149 c.894G>C synonymous_variant 0.57 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol
amikacin Not assoc w R - Interim
Rv2477c 2783158 c.885A>C synonymous_variant 0.57 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783179 c.864G>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783182 c.861C>G synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783185 c.858G>A synonymous_variant 0.49 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783194 c.849A>G synonymous_variant 0.47 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783209 c.834G>A synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783221 c.822G>C synonymous_variant 0.43 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783224 c.819C>G synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783230 c.813T>G synonymous_variant 0.34 kanamycin
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783235 c.808T>C synonymous_variant 0.34 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783254 c.789A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783293 c.750G>A synonymous_variant 0.28 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783299 c.744A>G synonymous_variant 0.28 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783302 c.741A>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783311 c.732T>C synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783314 c.729C>G synonymous_variant 0.27 kanamycin
levofloxacin
moxifloxacin
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783317 c.726G>C synonymous_variant 0.28 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783329 c.714G>A synonymous_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783332 c.711T>C synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783335 c.708C>G synonymous_variant 0.43 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783344 c.699C>G synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783350 c.693T>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783353 c.690T>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783359 c.684G>A synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783374 c.669G>C synonymous_variant 0.41 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783395 c.648T>G synonymous_variant 0.43 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783437 c.606G>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783440 c.603T>C synonymous_variant 0.27 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783461 c.582T>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783464 c.579A>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783467 c.576G>C synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783473 c.570A>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783485 c.558G>C synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783497 c.544_546delTTGinsCTC synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783502 c.541T>C synonymous_variant 0.24 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783527 c.516A>G synonymous_variant 0.27 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783557 c.486T>C synonymous_variant 0.36 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783563 c.480A>G synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783572 c.471A>G synonymous_variant 0.49 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783586 p.Ala153Pro missense_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783593 c.450T>C synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783605 c.438T>C synonymous_variant 0.6 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783620 c.423C>G synonymous_variant 0.61 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783628 p.Ala139Ser missense_variant 0.57 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783656 c.387G>C synonymous_variant 0.65 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783665 c.378A>G synonymous_variant 0.67 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783674 c.369T>C synonymous_variant 0.7 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783683 c.360A>G synonymous_variant 0.69 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783700 p.Thr115Ser missense_variant 0.62 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783718 c.325T>C synonymous_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783719 c.324A>G synonymous_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783751 p.Ile98Val missense_variant 0.57 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783758 p.Asp95Glu missense_variant 0.51 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783761 c.282G>C synonymous_variant 0.49 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783766 p.Met93Leu missense_variant 0.45 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783776 c.267G>C synonymous_variant 0.42 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783779 c.264T>C synonymous_variant 0.4 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783797 p.Asp82Glu missense_variant 0.41 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783815 c.228A>G synonymous_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783821 p.Gln74Leu missense_variant 0.43 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783833 c.210G>C synonymous_variant 0.45 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783839 c.204C>G synonymous_variant 0.47 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783843 p.Gly67Asp missense_variant 0.47 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783846 p.Thr66Asn missense_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783860 c.183T>C synonymous_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783863 c.180C>T synonymous_variant 0.62 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783883 c.160T>C synonymous_variant 0.7 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783884 c.159T>C synonymous_variant 0.68 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783887 c.156C>G synonymous_variant 0.71 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783914 c.129T>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783920 c.123G>C synonymous_variant 0.5 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783929 c.114C>G synonymous_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783932 c.111C>T synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783938 c.105T>C synonymous_variant 0.46 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783953 c.90G>A synonymous_variant 0.4 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783962 c.81T>C synonymous_variant 0.38 kanamycin Not assoc w R - Interim
levofloxacin
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783971 c.72G>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783980 c.63C>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783992 c.51T>C synonymous_variant 0.29 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2784472 c.-430C>A upstream_gene_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2784477 c.-435T>C upstream_gene_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2784501 c.-459T>C upstream_gene_variant 0.35 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2784507 c.-465C>G upstream_gene_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
ribD 2987042 c.204A>G synonymous_variant 0.36 para-aminosalicylic_acid
ribD 2987046 p.Val70Ile missense_variant 0.33 para-aminosalicylic_acid
ribD 2987058 c.220T>C synonymous_variant 0.38 para-aminosalicylic_acid
ribD 2987066 c.228A>G synonymous_variant 0.38 para-aminosalicylic_acid
ribD 2987069 c.231T>C synonymous_variant 0.4 para-aminosalicylic_acid
ribD 2987092 p.Val85Ala missense_variant 0.39 para-aminosalicylic_acid
ribD 2987105 c.267C>G synonymous_variant 0.26 para-aminosalicylic_acid
ribD 2987108 c.270T>C synonymous_variant 0.24 para-aminosalicylic_acid
Rv2681 2997278 c.540G>C synonymous_variant 0.31 capreomycin
Rv2681 2997287 c.549G>C synonymous_variant 0.31 capreomycin
Rv2681 2997291 c.553T>C synonymous_variant 0.29 capreomycin
Rv2681 2997314 c.576A>G synonymous_variant 0.32 capreomycin
Rv2681 2997317 c.579A>G synonymous_variant 0.3 capreomycin
Rv2752c 3064809 c.1383C>G synonymous_variant 0.29 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3064815 c.1377T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3064831 p.Ala454Asn missense_variant 0.36 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3064838 c.1354T>C synonymous_variant 0.34 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065048 c.1144C>T synonymous_variant 0.22 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065052 c.1140G>A synonymous_variant 0.21 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065055 c.1137T>C synonymous_variant 0.22 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065064 c.1128G>C synonymous_variant 0.25 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065109 c.1081_1083delAGAinsCGC synonymous_variant 0.22 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065146 p.Phe349Tyr missense_variant 0.31 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065151 c.1041G>C synonymous_variant 0.43 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065183 p.Ser337Ala missense_variant 0.48 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065186 c.1006T>C synonymous_variant 0.48 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065190 p.Ile334Val missense_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065196 c.996T>C synonymous_variant 0.48 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065202 c.990T>G synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065205 c.987T>C synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065210 c.982T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065223 c.969T>C synonymous_variant 0.64 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065229 c.963G>C synonymous_variant 0.74 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065232 c.960T>C synonymous_variant 0.74 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065241 c.951A>G synonymous_variant 0.72 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065262 c.930G>A synonymous_variant 0.5 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065268 c.924A>G synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065288 c.904T>C synonymous_variant 0.39 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065292 c.900T>C synonymous_variant 0.39 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065421 c.771G>A synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065442 c.750T>C synonymous_variant 0.34 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065451 c.741G>A synonymous_variant 0.37 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065457 c.735A>C synonymous_variant 0.34 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065463 c.729T>C synonymous_variant 0.38 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065481 c.711T>C synonymous_variant 0.41 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065487 c.705T>G synonymous_variant 0.35 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065490 c.702A>C synonymous_variant 0.29 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065493 c.699G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065946 p.Gly82Ala missense_variant 0.45 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065955 c.235_237delTTGinsCTC synonymous_variant 0.42 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065979 c.213T>C synonymous_variant 0.36 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065993 p.Val67Ile missense_variant 0.27 levofloxacin
moxifloxacin
isoniazid Uncertain significance
rifampicin Uncertain significance
ethambutol Uncertain significance
Rv2752c 3065994 c.198T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066009 c.183G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066018 c.174T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066024 c.168T>G synonymous_variant 0.33 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066054 c.138T>G synonymous_variant 0.37 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066066 c.126T>C synonymous_variant 0.32 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066074 c.118C>T synonymous_variant 0.33 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066075 c.117A>G synonymous_variant 0.33 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066078 c.114C>T synonymous_variant 0.33 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066102 c.90C>T synonymous_variant 0.31 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066118 p.Asn25Ser missense_variant 0.25 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066270 c.-79G>A upstream_gene_variant 0.21 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066276 c.-85G>A upstream_gene_variant 0.22 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066279 c.-88A>G upstream_gene_variant 0.23 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066282 c.-91G>T upstream_gene_variant 0.24 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066287 c.-96G>C upstream_gene_variant 0.25 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066290 c.-99G>A upstream_gene_variant 0.24 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066291 c.-100G>A upstream_gene_variant 0.26 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066309 c.-118T>C upstream_gene_variant 0.45 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066315 c.-124C>T upstream_gene_variant 0.49 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066330 c.-139G>C upstream_gene_variant 0.44 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066335 c.-144T>C upstream_gene_variant 0.45 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066339 c.-148G>C upstream_gene_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066360 c.-169T>C upstream_gene_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066369 c.-180_-178delAGCinsGCG upstream_gene_variant 0.46 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066380 c.-189A>G upstream_gene_variant 0.45 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066501 c.-310G>C upstream_gene_variant 0.38 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066522 c.-331C>G upstream_gene_variant 0.46 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066531 c.-340C>G upstream_gene_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066549 c.-358T>C upstream_gene_variant 0.53 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066561 c.-370A>C upstream_gene_variant 0.53 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066567 c.-376C>G upstream_gene_variant 0.54 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066573 c.-382G>C upstream_gene_variant 0.54 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066579 c.-388A>G upstream_gene_variant 0.5 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066582 c.-392_-391delCCinsGG upstream_gene_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066603 c.-412A>G upstream_gene_variant 0.35 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066762 c.-571G>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066771 c.-580C>G upstream_gene_variant 0.33 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066774 c.-583T>C upstream_gene_variant 0.36 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066780 c.-589C>G upstream_gene_variant 0.4 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066807 c.-616T>C upstream_gene_variant 0.52 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066810 c.-619G>A upstream_gene_variant 0.51 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066819 c.-628T>C upstream_gene_variant 0.48 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066822 c.-631T>C upstream_gene_variant 0.47 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066839 c.-648A>G upstream_gene_variant 0.45 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066855 c.-664T>C upstream_gene_variant 0.4 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066859 c.-668C>G upstream_gene_variant 0.39 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066864 c.-673C>G upstream_gene_variant 0.39 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066867 c.-676T>C upstream_gene_variant 0.39 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
thyX 3067274 c.672C>G synonymous_variant 0.43 para-aminosalicylic_acid
thyX 3067277 c.669C>G synonymous_variant 0.43 para-aminosalicylic_acid
thyX 3067281 p.Val222Ala missense_variant 0.45 para-aminosalicylic_acid
thyX 3067284 p.Ala221Gly missense_variant 0.45 para-aminosalicylic_acid
thyX 3067286 c.660C>G synonymous_variant 0.45 para-aminosalicylic_acid
thyX 3067289 c.657C>G synonymous_variant 0.41 para-aminosalicylic_acid
thyX 3067292 c.654G>A synonymous_variant 0.43 para-aminosalicylic_acid
thyX 3067295 c.651C>T synonymous_variant 0.43 para-aminosalicylic_acid
thyX 3067316 c.630A>G synonymous_variant 0.52 para-aminosalicylic_acid
thyX 3067325 c.621A>G synonymous_variant 0.53 para-aminosalicylic_acid
thyX 3067349 c.597G>C synonymous_variant 0.55 para-aminosalicylic_acid
thyX 3067355 c.591A>C synonymous_variant 0.53 para-aminosalicylic_acid
thyX 3067367 c.579G>C synonymous_variant 0.62 para-aminosalicylic_acid
thyX 3067373 c.573C>G synonymous_variant 0.65 para-aminosalicylic_acid
thyX 3067376 c.570G>A synonymous_variant 0.66 para-aminosalicylic_acid
thyX 3067391 c.555G>C synonymous_variant 0.71 para-aminosalicylic_acid
thyX 3067394 c.552G>C synonymous_variant 0.68 para-aminosalicylic_acid
thyX 3067439 c.507A>G synonymous_variant 0.68 para-aminosalicylic_acid
thyX 3067445 c.501C>G synonymous_variant 0.68 para-aminosalicylic_acid
thyX 3067457 c.489C>G synonymous_variant 0.7 para-aminosalicylic_acid
thyX 3067465 p.Ile161Val missense_variant 0.68 para-aminosalicylic_acid
thyX 3067475 c.471A>G synonymous_variant 0.62 para-aminosalicylic_acid
thyX 3067490 c.456C>G synonymous_variant 0.61 para-aminosalicylic_acid
thyX 3067493 c.453A>G synonymous_variant 0.62 para-aminosalicylic_acid
thyX 3067515 p.Ser144Thr missense_variant 0.69 para-aminosalicylic_acid
thyX 3067530 p.Ala139Ser missense_variant 0.62 para-aminosalicylic_acid
thyX 3067545 p.Glu134Ala missense_variant 0.58 para-aminosalicylic_acid
thyX 3067549 p.Thr133Ala missense_variant 0.57 para-aminosalicylic_acid
thyX 3067556 p.His130Gln missense_variant 0.52 para-aminosalicylic_acid
thyX 3067559 c.387C>G synonymous_variant 0.52 para-aminosalicylic_acid
thyX 3067565 p.Asp127Glu missense_variant 0.52 para-aminosalicylic_acid
thyX 3067570 p.Ala126Pro missense_variant 0.47 para-aminosalicylic_acid
thyX 3067577 c.369G>A synonymous_variant 0.56 para-aminosalicylic_acid
thyX 3067583 c.363C>G synonymous_variant 0.58 para-aminosalicylic_acid
thyX 3067601 p.Arg115His missense_variant 0.43 para-aminosalicylic_acid
thyX 3067611 p.Lys112Thr missense_variant 0.44 para-aminosalicylic_acid
thyX 3067619 c.327A>C synonymous_variant 0.49 para-aminosalicylic_acid
thyX 3067631 c.315C>G synonymous_variant 0.51 para-aminosalicylic_acid
thyX 3067634 c.312C>G synonymous_variant 0.46 para-aminosalicylic_acid
thyX 3067652 c.294T>C synonymous_variant 0.57 para-aminosalicylic_acid
thyX 3067661 c.285C>G synonymous_variant 0.53 para-aminosalicylic_acid
thyX 3067685 c.261A>C synonymous_variant 0.52 para-aminosalicylic_acid
thyX 3067691 p.Ile85Leu missense_variant 0.51 para-aminosalicylic_acid
thyX 3067694 c.252G>C synonymous_variant 0.51 para-aminosalicylic_acid
thyX 3067718 c.228C>G synonymous_variant 0.5 para-aminosalicylic_acid
thyX 3067721 c.225T>C synonymous_variant 0.48 para-aminosalicylic_acid
thyX 3067727 c.219A>C synonymous_variant 0.49 para-aminosalicylic_acid
thyX 3067736 p.Phe70Leu missense_variant 0.44 para-aminosalicylic_acid
thyX 3067739 c.207T>C synonymous_variant 0.45 para-aminosalicylic_acid
thyX 3067761 p.Arg62Lys missense_variant 0.52 para-aminosalicylic_acid
thyX 3067765 p.Leu61Ile missense_variant 0.55 para-aminosalicylic_acid
thyX 3067772 c.174C>G synonymous_variant 0.64 para-aminosalicylic_acid
thyX 3067781 c.165C>A synonymous_variant 0.69 para-aminosalicylic_acid
thyX 3067793 c.153T>C synonymous_variant 0.74 para-aminosalicylic_acid
thyX 3067799 c.147G>A synonymous_variant 0.74 para-aminosalicylic_acid
thyX 3067802 c.144C>G synonymous_variant 0.73 para-aminosalicylic_acid
thyX 3067814 c.132T>C synonymous_variant 0.64 para-aminosalicylic_acid
thyX 3067850 c.96A>C synonymous_variant 0.65 para-aminosalicylic_acid
thyX 3067869 p.Thr26Ser missense_variant 0.66 para-aminosalicylic_acid
thyX 3067874 c.72C>G synonymous_variant 0.66 para-aminosalicylic_acid
thyX 3067883 c.63C>G synonymous_variant 0.57 para-aminosalicylic_acid
thyX 3067886 c.60A>C synonymous_variant 0.52 para-aminosalicylic_acid
thyX 3067889 c.57C>G synonymous_variant 0.52 para-aminosalicylic_acid
thyA 3073836 c.636C>T synonymous_variant 0.23 para-aminosalicylic_acid
thyA 3073839 c.633T>C synonymous_variant 0.26 para-aminosalicylic_acid
thyA 3073860 c.612C>G synonymous_variant 0.41 para-aminosalicylic_acid
thyA 3073863 c.609T>C synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073866 c.606C>G synonymous_variant 0.42 para-aminosalicylic_acid
thyA 3073872 p.Ile200Val missense_variant 0.4 para-aminosalicylic_acid
thyA 3073892 c.580T>C synonymous_variant 0.42 para-aminosalicylic_acid
thyA 3073898 p.Ala192Ser missense_variant 0.41 para-aminosalicylic_acid
thyA 3073917 c.555C>G synonymous_variant 0.56 para-aminosalicylic_acid
thyA 3073920 c.552C>G synonymous_variant 0.59 para-aminosalicylic_acid
thyA 3073925 c.547T>C synonymous_variant 0.57 para-aminosalicylic_acid
thyA 3073929 c.543T>C synonymous_variant 0.58 para-aminosalicylic_acid
thyA 3073953 c.519T>C synonymous_variant 0.53 para-aminosalicylic_acid
thyA 3073956 c.516G>C synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3073959 c.513T>C synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3073977 c.495A>G synonymous_variant 0.53 para-aminosalicylic_acid
thyA 3073989 c.483T>C synonymous_variant 0.53 para-aminosalicylic_acid
thyA 3074004 c.468T>C synonymous_variant 0.45 para-aminosalicylic_acid
thyA 3074010 c.462C>G synonymous_variant 0.38 para-aminosalicylic_acid
thyA 3074053 p.Arg140Gln missense_variant 0.32 para-aminosalicylic_acid
thyA 3074055 p.Glu139Pro missense_variant 0.35 para-aminosalicylic_acid
thyA 3074061 c.411A>G synonymous_variant 0.31 para-aminosalicylic_acid
thyA 3074079 c.393G>C synonymous_variant 0.31 para-aminosalicylic_acid
thyA 3074127 c.345G>C synonymous_variant 0.42 para-aminosalicylic_acid
thyA 3074130 c.342G>C synonymous_variant 0.44 para-aminosalicylic_acid
thyA 3074154 c.318T>C synonymous_variant 0.49 para-aminosalicylic_acid
thyA 3074157 c.315C>G synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3074160 c.312A>G synonymous_variant 0.53 para-aminosalicylic_acid
thyA 3074163 p.Ala103Thr missense_variant 0.55 para-aminosalicylic_acid
thyA 3074172 c.300G>C synonymous_variant 0.59 para-aminosalicylic_acid
thyA 3074175 c.297A>G synonymous_variant 0.59 para-aminosalicylic_acid
thyA 3074181 c.291A>G synonymous_variant 0.57 para-aminosalicylic_acid
thyA 3074187 c.285T>C synonymous_variant 0.62 para-aminosalicylic_acid
thyA 3074205 p.Glu89Asp missense_variant 0.62 para-aminosalicylic_acid
thyA 3074214 c.258T>C synonymous_variant 0.58 para-aminosalicylic_acid
thyA 3074241 c.231C>G synonymous_variant 0.38 para-aminosalicylic_acid
thyA 3074244 c.228A>G synonymous_variant 0.33 para-aminosalicylic_acid
thyA 3074254 p.His73Arg missense_variant 0.27 para-aminosalicylic_acid
thyA 3074262 c.210T>C synonymous_variant 0.22 para-aminosalicylic_acid
thyA 3074267 p.Ile69Val missense_variant 0.2 para-aminosalicylic_acid
ald 3086788 c.-32T>C upstream_gene_variant 1.0 cycloserine
ald 3087305 c.486G>C synonymous_variant 0.38 cycloserine
ald 3087311 c.492C>G synonymous_variant 0.41 cycloserine
ald 3087318 p.Glu167Lys missense_variant 0.4 cycloserine
ald 3087344 c.525C>G synonymous_variant 0.44 cycloserine
ald 3087347 c.528C>G synonymous_variant 0.44 cycloserine
ald 3087356 c.537C>G synonymous_variant 0.41 cycloserine
ald 3087680 c.861G>C synonymous_variant 0.27 cycloserine
ald 3087704 c.885T>C synonymous_variant 0.26 cycloserine
ald 3087716 c.897G>C synonymous_variant 0.3 cycloserine
ald 3087726 p.Ala303Ser missense_variant 0.26 cycloserine
ald 3087729 p.Ser304Ala missense_variant 0.26 cycloserine
ald 3087737 c.918G>C synonymous_variant 0.27 cycloserine
ald 3087749 c.930C>G synonymous_variant 0.23 cycloserine
ald 3087750 p.Tyr311Val missense_variant 0.24 cycloserine
ald 3087761 c.942C>G synonymous_variant 0.23 cycloserine
ald 3087770 c.951G>C synonymous_variant 0.3 cycloserine
whiB7 3569096 c.-429_-418delACCGGGCCTGTA upstream_gene_variant 0.33 kanamycin
amikacin
streptomycin
whiB7 3569112 c.-436_-434delGAC upstream_gene_variant 0.32 kanamycin
amikacin
streptomycin
whiB7 3569132 c.-453C>G upstream_gene_variant 0.32 kanamycin
amikacin
streptomycin
whiB7 3569142 c.-465_-463delTCGinsCCC upstream_gene_variant 0.32 kanamycin
amikacin
streptomycin
whiB7 3569145 c.-466A>C upstream_gene_variant 0.33 kanamycin
amikacin
streptomycin
whiB7 3569151 c.-472A>G upstream_gene_variant 0.48 kanamycin
amikacin
streptomycin
whiB7 3569166 c.-487C>G upstream_gene_variant 0.43 kanamycin
amikacin
streptomycin
whiB7 3569169 c.-490T>C upstream_gene_variant 0.36 kanamycin
amikacin
streptomycin
whiB7 3569181 c.-502C>T upstream_gene_variant 0.31 kanamycin
amikacin
streptomycin
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0 pyrazinamide Not assoc w R - Interim
lpqB 3623703 p.Ala403Val missense_variant 0.28 rifampicin
bedaquiline
lpqB 3623705 c.1206C>T synonymous_variant 0.29 rifampicin
bedaquiline
lpqB 3623721 p.Ser397Thr missense_variant 0.32 rifampicin
bedaquiline
lpqB 3623766 p.Gly382Ala missense_variant 0.32 rifampicin
bedaquiline
lpqB 3623774 c.1137C>T synonymous_variant 0.32 rifampicin
bedaquiline
lpqB 3623777 c.1134C>T synonymous_variant 0.33 rifampicin
bedaquiline
lpqB 3623782 p.Val377Ile missense_variant 0.32 rifampicin
bedaquiline
lpqB 3624041 p.Glu290Asp missense_variant 0.19 rifampicin
bedaquiline
lpqB 3624050 c.861C>G synonymous_variant 0.23 rifampicin
bedaquiline
lpqB 3624077 c.834G>A synonymous_variant 0.33 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3624082 c.829A>C synonymous_variant 0.26 rifampicin
bedaquiline
lpqB 3624086 c.825C>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3624100 c.811T>C synonymous_variant 0.3 rifampicin
bedaquiline
lpqB 3624101 c.810C>G synonymous_variant 0.28 rifampicin
bedaquiline
lpqB 3624107 c.804C>T synonymous_variant 0.32 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3624116 c.795A>G synonymous_variant 0.34 rifampicin
bedaquiline
lpqB 3624119 c.792C>G synonymous_variant 0.35 rifampicin
bedaquiline
lpqB 3624124 p.Leu263Val missense_variant 0.35 rifampicin
bedaquiline
lpqB 3624125 c.786A>G synonymous_variant 0.37 rifampicin
bedaquiline
lpqB 3624143 c.768T>C synonymous_variant 0.46 rifampicin
bedaquiline
lpqB 3624166 p.Met249Leu missense_variant 0.4 rifampicin
bedaquiline
lpqB 3624167 c.744C>T synonymous_variant 0.4 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3624173 c.738A>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3624179 c.732C>G synonymous_variant 0.42 rifampicin
bedaquiline
lpqB 3624185 c.726C>T synonymous_variant 0.42 rifampicin
bedaquiline
lpqB 3624194 c.717C>G synonymous_variant 0.44 rifampicin
bedaquiline
lpqB 3624200 c.711A>G synonymous_variant 0.43 rifampicin
bedaquiline
lpqB 3624204 p.Ser236Asn missense_variant 0.47 rifampicin
bedaquiline
lpqB 3624209 c.702A>C synonymous_variant 0.43 rifampicin
bedaquiline
lpqB 3624224 c.687T>C synonymous_variant 0.44 rifampicin
bedaquiline
lpqB 3624646 c.265T>C synonymous_variant 0.33 rifampicin
bedaquiline
lpqB 3624649 c.262T>C synonymous_variant 0.36 rifampicin
bedaquiline
lpqB 3624673 p.Ala80Ser missense_variant 0.46 rifampicin
bedaquiline
lpqB 3624674 c.237C>T synonymous_variant 0.46 rifampicin
bedaquiline
lpqB 3624680 c.231T>A synonymous_variant 0.46 rifampicin
bedaquiline
lpqB 3624686 p.Glu75Gln missense_variant 0.48 rifampicin
bedaquiline
lpqB 3624701 c.210T>C synonymous_variant 0.58 rifampicin
bedaquiline
lpqB 3624704 c.207G>C synonymous_variant 0.58 rifampicin
bedaquiline
lpqB 3624707 c.204G>C synonymous_variant 0.59 rifampicin
bedaquiline
lpqB 3624722 c.189C>G synonymous_variant 0.61 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3624728 c.183C>T synonymous_variant 0.61 rifampicin
bedaquiline
lpqB 3624749 c.162G>A synonymous_variant 0.62 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3624755 c.154_156delTTAinsCTG synonymous_variant 0.54 rifampicin
bedaquiline
lpqB 3624770 c.141T>C synonymous_variant 0.52 rifampicin
bedaquiline
lpqB 3624776 c.135T>C synonymous_variant 0.5 rifampicin
bedaquiline
lpqB 3624783 p.Ser43Thr missense_variant 0.38 rifampicin
bedaquiline
lpqB 3624788 c.123A>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3624797 c.114T>C synonymous_variant 0.25 rifampicin
bedaquiline
lpqB 3624807 p.Val35Ala missense_variant 0.23 rifampicin
bedaquiline
lpqB 3624812 c.99T>G synonymous_variant 0.21 rifampicin
bedaquiline
lpqB 3624815 c.96A>G synonymous_variant 0.2 rifampicin
bedaquiline
mtrB 3625065 p.Met517Leu missense_variant 1.0 rifampicin Not assoc w R
bedaquiline Uncertain significance
mtrB 3625087 p.Ala509Ser missense_variant 0.38 rifampicin
bedaquiline
mtrB 3625093 p.Glu507Asp missense_variant 0.38 rifampicin
bedaquiline
lpqB 3625099 c.-189C>G upstream_gene_variant 0.36 rifampicin
bedaquiline
lpqB 3625117 c.-207T>G upstream_gene_variant 0.38 rifampicin
bedaquiline
lpqB 3625123 c.-213T>C upstream_gene_variant 0.33 rifampicin
bedaquiline
lpqB 3625134 c.-224T>C upstream_gene_variant 0.24 rifampicin
bedaquiline
mtrB 3625135 c.1479A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3625138 c.-228C>G upstream_gene_variant 0.26 rifampicin
bedaquiline
lpqB 3625141 c.-231T>C upstream_gene_variant 0.27 rifampicin
bedaquiline
mtrB 3625149 p.Val489Ile missense_variant 0.42 rifampicin
bedaquiline
lpqB 3625161 c.-251T>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrB 3625162 c.1452T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3625165 c.-255G>C upstream_gene_variant 0.41 rifampicin
bedaquiline
lpqB 3625186 c.-276T>C upstream_gene_variant 0.52 rifampicin
bedaquiline
mtrB 3625189 c.1425A>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625195 c.-285A>G upstream_gene_variant 0.59 rifampicin
bedaquiline
lpqB 3625201 c.-291T>C upstream_gene_variant 0.61 rifampicin
bedaquiline
mtrB 3625206 p.Ser470Ala missense_variant 0.59 rifampicin
bedaquiline
mtrB 3625222 c.1392T>C synonymous_variant 0.61 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625225 c.-315G>C upstream_gene_variant 0.61 rifampicin
bedaquiline
lpqB 3625240 c.-330T>C upstream_gene_variant 0.56 rifampicin
bedaquiline
lpqB 3625243 c.-333T>G upstream_gene_variant 0.53 rifampicin
bedaquiline
mtrB 3625267 c.1347T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625270 c.-360G>C upstream_gene_variant 0.39 rifampicin
bedaquiline
lpqB 3625279 c.-369C>G upstream_gene_variant 0.37 rifampicin
bedaquiline
lpqB 3625291 c.-381A>G upstream_gene_variant 0.26 rifampicin
bedaquiline
lpqB 3625510 c.-600T>C upstream_gene_variant 0.28 rifampicin
bedaquiline
lpqB 3625513 c.-603G>C upstream_gene_variant 0.3 rifampicin
bedaquiline
lpqB 3625518 c.-608T>C upstream_gene_variant 0.33 rifampicin
bedaquiline
lpqB 3625525 c.-615G>C upstream_gene_variant 0.34 rifampicin
bedaquiline
lpqB 3625528 c.-618G>T upstream_gene_variant 0.34 rifampicin
bedaquiline
lpqB 3625537 c.-627T>C upstream_gene_variant 0.4 rifampicin
bedaquiline
lpqB 3625543 c.-633G>C upstream_gene_variant 0.36 rifampicin
bedaquiline
lpqB 3625549 c.-639G>A upstream_gene_variant 0.37 rifampicin
bedaquiline
mtrB 3625569 c.1045T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625572 p.Thr348Ser missense_variant 0.48 rifampicin
bedaquiline
lpqB 3625579 c.-669A>G upstream_gene_variant 0.54 rifampicin
bedaquiline
lpqB 3625594 c.-684T>C upstream_gene_variant 0.56 rifampicin
bedaquiline
lpqB 3625602 c.-692T>C upstream_gene_variant 0.55 rifampicin
bedaquiline
lpqB 3625612 c.-702G>C upstream_gene_variant 0.56 rifampicin
bedaquiline
mtrB 3625616 p.Arg333Ala missense_variant 0.57 rifampicin
bedaquiline
lpqB 3625624 c.-714C>G upstream_gene_variant 0.61 rifampicin
bedaquiline
mtrB 3625636 c.978C>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625656 c.958T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3625663 c.-753G>C upstream_gene_variant 0.69 rifampicin
bedaquiline
lpqB 3625669 c.-759G>C upstream_gene_variant 0.63 rifampicin
bedaquiline
lpqB 3625687 c.-777G>C upstream_gene_variant 0.57 rifampicin
bedaquiline
lpqB 3625690 c.-780T>C upstream_gene_variant 0.56 rifampicin
bedaquiline
lpqB 3625696 c.-786A>G upstream_gene_variant 0.54 rifampicin
bedaquiline
mtrB 3625705 c.909C>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625714 c.-804C>T upstream_gene_variant 0.51 rifampicin
bedaquiline
mtrB 3625720 c.894G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625729 c.885A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625735 c.-825C>T upstream_gene_variant 0.56 rifampicin
bedaquiline
lpqB 3625749 c.-839C>T upstream_gene_variant 0.58 rifampicin
bedaquiline
mtrB 3625750 c.864G>A synonymous_variant 0.58 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625755 p.Ala287Thr missense_variant 0.59 rifampicin Uncertain significance
bedaquiline
mtrB 3625765 c.849C>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625774 c.840G>A synonymous_variant 0.53 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625797 p.Val273Met missense_variant 0.66 rifampicin Uncertain significance
bedaquiline Uncertain significance
mtrB 3625806 c.808A>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625807 c.807C>G synonymous_variant 0.66 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625837 c.777C>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625849 c.-939T>C upstream_gene_variant 0.53 rifampicin
bedaquiline
mtrB 3625852 c.762A>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625864 c.-954T>G upstream_gene_variant 0.64 rifampicin
bedaquiline
mtrB 3625876 c.738G>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625900 c.-990G>C upstream_gene_variant 0.5 rifampicin
bedaquiline
lpqB 3625903 c.-993G>C upstream_gene_variant 0.48 rifampicin
bedaquiline
lpqB 3625909 c.-999T>C upstream_gene_variant 0.48 rifampicin
bedaquiline
mtrB 3625923 c.691C>T synonymous_variant 0.4 rifampicin
bedaquiline
mtrB 3625927 c.687T>C synonymous_variant 0.38 rifampicin
bedaquiline
mtrB 3626562 p.Pro18Ser missense_variant 1.0 rifampicin Not assoc w R
bedaquiline Uncertain significance
mtrB 3626687 c.-74G>T upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626704 c.-91C>T upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626711 c.-98T>C upstream_gene_variant 0.34 rifampicin
bedaquiline
mtrA 3626723 c.627C>T synonymous_variant 0.36 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626726 c.-113T>C upstream_gene_variant 0.36 rifampicin
bedaquiline
mtrB 3626729 c.-116G>A upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626732 c.-119A>G upstream_gene_variant 0.39 rifampicin
bedaquiline
mtrA 3626759 c.591T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626774 c.-163_-161delAGGinsCGC upstream_gene_variant 0.32 rifampicin
bedaquiline
mtrB 3626783 c.-170C>G upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrA 3626786 c.564A>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626792 c.558G>T synonymous_variant 0.37 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626795 c.-182C>T upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrB 3626798 c.-185T>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrA 3626804 c.546A>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626840 c.-227C>G upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrA 3626846 c.504G>A synonymous_variant 0.41 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626858 c.-245A>G upstream_gene_variant 0.37 rifampicin
bedaquiline
mtrB 3626861 c.-248C>G upstream_gene_variant 0.36 rifampicin
bedaquiline
mtrB 3626866 c.-253T>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrB 3626876 c.-263A>G upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626885 c.-272A>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrB 3626890 c.-277T>C upstream_gene_variant 0.33 rifampicin
bedaquiline
mtrB 3626903 c.-290T>C upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626912 c.-299T>G upstream_gene_variant 0.42 rifampicin
bedaquiline
mtrB 3626927 c.-314G>C upstream_gene_variant 0.37 rifampicin
bedaquiline
mtrB 3626930 c.-317A>G upstream_gene_variant 0.39 rifampicin
bedaquiline
mtrA 3626939 c.411A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626942 c.-329A>C upstream_gene_variant 0.33 rifampicin
bedaquiline
mtrB 3626957 c.-344G>C upstream_gene_variant 0.34 rifampicin
bedaquiline
mtrB 3626972 c.-359A>G upstream_gene_variant 0.37 rifampicin
bedaquiline
mtrB 3626987 c.-374C>G upstream_gene_variant 0.34 rifampicin
bedaquiline
mtrB 3627008 c.-395G>C upstream_gene_variant 0.43 rifampicin
bedaquiline
mtrB 3627011 c.-398T>G upstream_gene_variant 0.37 rifampicin
bedaquiline
mtrB 3627065 c.-452G>C upstream_gene_variant 0.41 rifampicin
bedaquiline
mtrA 3627068 c.282T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627071 c.279G>T synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627074 c.-461G>C upstream_gene_variant 0.36 rifampicin
bedaquiline
mtrA 3627080 c.270T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627083 c.-470G>C upstream_gene_variant 0.39 rifampicin
bedaquiline
mtrA 3627098 c.252A>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627104 c.-491C>G upstream_gene_variant 0.42 rifampicin
bedaquiline
mtrA 3627119 c.231T>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627122 c.-509T>C upstream_gene_variant 0.4 rifampicin
bedaquiline
mtrB 3627167 c.-554T>C upstream_gene_variant 0.51 rifampicin
bedaquiline
mtrB 3627181 c.-568T>C upstream_gene_variant 0.54 rifampicin
bedaquiline
mtrB 3627182 c.-569T>C upstream_gene_variant 0.56 rifampicin
bedaquiline
mtrA 3627188 c.162A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627209 c.-596G>A upstream_gene_variant 0.64 rifampicin
bedaquiline
mtrA 3627221 c.129C>T synonymous_variant 0.6 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627227 c.123T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627233 c.-620T>C upstream_gene_variant 0.59 rifampicin
bedaquiline
mtrB 3627236 c.-623T>C upstream_gene_variant 0.6 rifampicin
bedaquiline
mtrA 3627242 c.108C>T synonymous_variant 0.62 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627254 c.-641C>T upstream_gene_variant 0.62 rifampicin
bedaquiline
mtrB 3627263 c.-650C>T upstream_gene_variant 0.62 rifampicin
bedaquiline
mtrB 3627266 c.-653A>G upstream_gene_variant 0.63 rifampicin
bedaquiline
mtrB 3627272 c.-659G>T upstream_gene_variant 0.6 rifampicin
bedaquiline
mtrB 3627275 c.-662G>T upstream_gene_variant 0.6 rifampicin
bedaquiline
mtrB 3627296 c.-683T>C upstream_gene_variant 0.53 rifampicin
bedaquiline
mtrB 3627299 c.-688_-686delTTGinsCTA upstream_gene_variant 0.52 rifampicin
bedaquiline
mtrB 3627314 c.-701C>T upstream_gene_variant 0.52 rifampicin
bedaquiline
mtrB 3627317 c.-704T>C upstream_gene_variant 0.52 rifampicin
bedaquiline
mtrA 3627343 p.Thr3Ser missense_variant 0.44 rifampicin
bedaquiline
mtrB 3627360 c.-747G>C upstream_gene_variant 0.29 rifampicin
bedaquiline
mtrA 3627860 c.-511G>C upstream_gene_variant 0.43 rifampicin
bedaquiline
mtrA 3627872 c.-523T>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrA 3627875 c.-526G>C upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrA 3627881 c.-532G>C upstream_gene_variant 0.38 rifampicin
bedaquiline
mtrA 3627884 c.-535A>G upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrA 3627887 c.-538C>G upstream_gene_variant 0.39 rifampicin
bedaquiline
mtrA 3627893 c.-544T>G upstream_gene_variant 0.42 rifampicin
bedaquiline
mtrA 3627917 c.-568G>C upstream_gene_variant 0.36 rifampicin
bedaquiline
mtrA 3627920 c.-571A>G upstream_gene_variant 0.36 rifampicin
bedaquiline
fbiA 3640291 c.-252T>C upstream_gene_variant 0.26 pretomanid
delamanid
clofazimine
fbiA 3640302 c.-241_-236delTTAACCinsA upstream_gene_variant 0.3 pretomanid
delamanid
clofazimine
fbiA 3640347 c.-196A>G upstream_gene_variant 0.38 pretomanid
delamanid
clofazimine
fbiA 3640349 c.-194A>G upstream_gene_variant 0.38 pretomanid
delamanid
clofazimine
fbiA 3640350 c.-193C>T upstream_gene_variant 0.38 pretomanid
delamanid
clofazimine
fbiA 3640365 c.-178C>G upstream_gene_variant 0.38 pretomanid
delamanid
clofazimine
fbiB 3642096 p.Val188Leu missense_variant 0.29 pretomanid
delamanid
clofazimine
fbiB 3642113 c.579A>G synonymous_variant 0.33 pretomanid
delamanid
clofazimine
fbiB 3642114 p.Val194Ile missense_variant 0.32 pretomanid
delamanid
clofazimine Uncertain significance
fbiB 3642144 c.610T>C synonymous_variant 0.38 pretomanid
delamanid
clofazimine
fbiB 3642152 c.618A>G synonymous_variant 0.36 pretomanid
delamanid
clofazimine
fbiB 3642169 p.Thr212Met missense_variant 0.38 pretomanid
delamanid
clofazimine
fbiB 3642656 c.1122G>C synonymous_variant 0.25 pretomanid
delamanid
clofazimine
fbiB 3642662 c.1128C>G synonymous_variant 0.23 pretomanid
delamanid
clofazimine
fbiB 3642668 c.1134A>G synonymous_variant 0.28 pretomanid
delamanid
clofazimine
fbiB 3642719 c.1185T>C synonymous_variant 0.31 pretomanid
delamanid
clofazimine
fbiB 3642731 c.1197C>G synonymous_variant 0.24 pretomanid
delamanid
clofazimine
fbiB 3642743 c.1209T>C synonymous_variant 0.24 pretomanid
delamanid
clofazimine
fbiB 3642749 c.1215T>C synonymous_variant 0.26 pretomanid
delamanid
clofazimine
rpoA 3877482 c.1026C>G synonymous_variant 0.35 rifampicin
rpoA 3877494 p.Glu338Asp missense_variant 0.5 rifampicin Uncertain significance
rpoA 3877503 c.1005G>C synonymous_variant 0.55 rifampicin
rpoA 3877507 p.Gly334Ala missense_variant 0.56 rifampicin
rpoA 3877515 c.993G>C synonymous_variant 0.61 rifampicin
rpoA 3877553 p.Glu319Gln missense_variant 0.8 rifampicin
rpoA 3877571 p.Pro313Ala missense_variant 0.75 rifampicin
rpoA 3877587 c.921A>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoA 3877613 p.Ile299Val missense_variant 0.62 rifampicin
rpoA 3877656 c.852T>G synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoA 3877668 c.840A>G synonymous_variant 0.58 rifampicin
rpoA 3877679 p.Ala277Ser missense_variant 0.56 rifampicin
rpoA 3877686 c.822A>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoA 3877692 c.816G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoA 3877704 c.804G>C synonymous_variant 0.57 rifampicin
rpoA 3877743 c.765T>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoA 3877764 c.744C>G synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoA 3877770 c.738A>G synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoA 3877776 c.732T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoA 3877782 c.726T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoA 3877791 c.717C>G synonymous_variant 0.59 rifampicin
rpoA 3877818 c.690A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoA 3877839 c.669G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoA 3877848 c.660C>T synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoA 3877857 c.651G>A synonymous_variant 0.5 rifampicin
rpoA 3877866 c.642G>C synonymous_variant 0.49 rifampicin
rpoA 3877875 c.633T>G synonymous_variant 0.45 rifampicin
rpoA 3877878 c.630G>C synonymous_variant 0.45 rifampicin
rpoA 3877890 c.618C>T synonymous_variant 0.51 rifampicin
rpoA 3877896 c.612G>C synonymous_variant 0.51 rifampicin
rpoA 3877900 p.Ser203Asn missense_variant 0.49 rifampicin
rpoA 3877905 c.603A>G synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoA 3877909 p.Asn200Ser missense_variant 0.54 rifampicin
rpoA 3877920 c.588G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoA 3877923 c.585C>T synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoA 3877926 c.582G>C synonymous_variant 0.52 rifampicin
rpoA 3877962 c.546G>T synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoA 3877986 c.522G>C synonymous_variant 0.53 rifampicin
rpoA 3877989 c.519A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoA 3878001 c.507A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoA 3878022 c.486T>C synonymous_variant 0.56 rifampicin
rpoA 3878028 c.480G>C synonymous_variant 0.56 rifampicin
rpoA 3878031 c.477T>C synonymous_variant 0.55 rifampicin
rpoA 3878040 c.468T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoA 3878043 c.465G>A synonymous_variant 0.52 rifampicin
rpoA 3878055 c.453A>G synonymous_variant 0.5 rifampicin
rpoA 3878058 c.450G>T synonymous_variant 0.45 rifampicin
rpoA 3878061 c.447G>C synonymous_variant 0.44 rifampicin
rpoA 3878067 c.441C>G synonymous_variant 0.42 rifampicin
rpoA 3878070 c.438T>C synonymous_variant 0.45 rifampicin
rpoA 3878076 c.432C>T synonymous_variant 0.5 rifampicin
rpoA 3878082 c.426T>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoA 3878094 c.414C>G synonymous_variant 0.48 rifampicin
rpoA 3878103 c.405A>G synonymous_variant 0.43 rifampicin
rpoA 3878106 c.402G>C synonymous_variant 0.43 rifampicin
rpoA 3878118 c.390T>C synonymous_variant 0.28 rifampicin
rpoA 3878130 c.378C>G synonymous_variant 0.26 rifampicin
rpoA 3878141 p.Met123Leu missense_variant 0.22 rifampicin Uncertain significance
rpoA 3878143 p.Gly122Asp missense_variant 0.21 rifampicin Uncertain significance
rpoA 3878157 c.351C>G synonymous_variant 0.36 rifampicin
rpoA 3878163 c.345C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoA 3878169 c.339G>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoA 3878172 c.336G>C synonymous_variant 0.3 rifampicin
rpoA 3878181 c.327C>T synonymous_variant 0.27 rifampicin
rpoA 3878187 c.321C>G synonymous_variant 0.28 rifampicin
rpoA 3878193 c.315T>C synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoA 3878199 c.309T>C synonymous_variant 0.31 rifampicin
rpoA 3878217 c.291A>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoA 3878226 c.282C>G synonymous_variant 0.44 rifampicin
rpoA 3878232 c.276G>C synonymous_variant 0.47 rifampicin
rpoA 3878247 c.261G>C synonymous_variant 0.45 rifampicin
rpoA 3878271 c.237T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoA 3878284 p.Glu75Ala missense_variant 0.46 rifampicin
rpoA 3878292 c.216T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoA 3878298 c.210A>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoA 3878304 c.204G>C synonymous_variant 0.4 rifampicin
rpoA 3878313 c.195G>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoA 3878322 c.186A>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoA 3878331 c.177A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoA 3878334 c.174T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoA 3878337 c.171T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoA 3878340 c.168C>T synonymous_variant 0.43 rifampicin
rpoA 3878346 c.162T>C synonymous_variant 0.44 rifampicin
rpoA 3878364 c.144A>T synonymous_variant 0.48 rifampicin
rpoA 3878367 c.141C>G synonymous_variant 0.47 rifampicin
rpoA 3878376 c.132G>C synonymous_variant 0.52 rifampicin
rpoA 3878385 c.123C>G synonymous_variant 0.52 rifampicin
rpoA 3878388 c.120C>G synonymous_variant 0.5 rifampicin
rpoA 3878391 c.117T>C synonymous_variant 0.51 rifampicin
rpoA 3878415 c.93C>T synonymous_variant 0.54 rifampicin
rpoA 3878424 c.84G>C synonymous_variant 0.59 rifampicin
rpoA 3878436 c.72A>G synonymous_variant 0.6 rifampicin
rpoA 3878442 c.66G>C synonymous_variant 0.6 rifampicin
rpoA 3878454 c.54A>C synonymous_variant 0.55 rifampicin
rpoA 3878472 p.Asp12Glu missense_variant 0.49 rifampicin
rpoA 3878478 c.30C>G synonymous_variant 0.41 rifampicin
rpoA 3878484 c.24C>A synonymous_variant 0.41 rifampicin
rpoA 3878490 c.18C>A synonymous_variant 0.43 rifampicin
rpoA 3878496 c.12A>T synonymous_variant 0.41 rifampicin
rpoA 3878713 c.-206G>A upstream_gene_variant 0.67 rifampicin Uncertain significance
rpoA 3878716 c.-209C>G upstream_gene_variant 0.68 rifampicin
rpoA 3878725 c.-218A>G upstream_gene_variant 0.7 rifampicin
rpoA 3878736 c.-229A>G upstream_gene_variant 0.72 rifampicin
rpoA 3878737 c.-230G>C upstream_gene_variant 0.72 rifampicin
rpoA 3878742 c.-235G>A upstream_gene_variant 0.75 rifampicin
rpoA 3878746 c.-239A>G upstream_gene_variant 0.75 rifampicin Uncertain significance
rpoA 3878749 c.-242G>T upstream_gene_variant 0.75 rifampicin
rpoA 3878761 c.-254G>C upstream_gene_variant 0.74 rifampicin
rpoA 3878764 c.-257A>G upstream_gene_variant 0.77 rifampicin
rpoA 3878785 c.-278T>G upstream_gene_variant 0.61 rifampicin
rpoA 3878788 c.-281G>C upstream_gene_variant 0.55 rifampicin Uncertain significance
rpoA 3878806 c.-299C>G upstream_gene_variant 0.53 rifampicin
rpoA 3878809 c.-302T>C upstream_gene_variant 0.54 rifampicin
rpoA 3878824 c.-317G>C upstream_gene_variant 0.5 rifampicin
rpoA 3878833 c.-326C>G upstream_gene_variant 0.39 rifampicin
rpoA 3878836 c.-331_-329delAAGinsTCC upstream_gene_variant 0.36 rifampicin
rpoA 3878853 c.-346G>A upstream_gene_variant 0.37 rifampicin
rpoA 3878860 c.-353C>T upstream_gene_variant 0.47 rifampicin
rpoA 3878878 c.-371T>C upstream_gene_variant 0.54 rifampicin Uncertain significance
rpoA 3878909 c.-402A>G upstream_gene_variant 0.6 rifampicin
rpoA 3878914 c.-407T>C upstream_gene_variant 0.62 rifampicin Uncertain significance
rpoA 3878917 c.-410G>A upstream_gene_variant 0.62 rifampicin Uncertain significance
rpoA 3878938 c.-431T>A upstream_gene_variant 0.69 rifampicin
rpoA 3878947 c.-440G>C upstream_gene_variant 0.7 rifampicin Uncertain significance
rpoA 3878962 c.-455G>A upstream_gene_variant 0.68 rifampicin Uncertain significance
rpoA 3878968 c.-461T>C upstream_gene_variant 0.68 rifampicin Uncertain significance
rpoA 3878976 c.-469A>G upstream_gene_variant 0.66 rifampicin Uncertain significance
rpoA 3878986 c.-479G>C upstream_gene_variant 0.62 rifampicin
rpoA 3878998 c.-491C>G upstream_gene_variant 0.61 rifampicin Uncertain significance
rpoA 3879005 c.-499_-498delAAinsCG upstream_gene_variant 0.51 rifampicin
rpoA 3879013 c.-506A>G upstream_gene_variant 0.53 rifampicin
rpoA 3879079 c.-572A>G upstream_gene_variant 0.52 rifampicin
rpoA 3879088 c.-581A>C upstream_gene_variant 0.54 rifampicin
rpoA 3879094 c.-587T>C upstream_gene_variant 0.55 rifampicin
rpoA 3879121 c.-614T>G upstream_gene_variant 0.54 rifampicin
rpoA 3879127 c.-620T>C upstream_gene_variant 0.54 rifampicin
rpoA 3879154 c.-647T>C upstream_gene_variant 0.58 rifampicin
rpoA 3879160 c.-653A>G upstream_gene_variant 0.57 rifampicin
rpoA 3879178 c.-671T>C upstream_gene_variant 0.54 rifampicin
rpoA 3879190 c.-683C>G upstream_gene_variant 0.49 rifampicin
rpoA 3879222 c.-715T>C upstream_gene_variant 0.4 rifampicin
rpoA 3879226 c.-719G>C upstream_gene_variant 0.41 rifampicin
rpoA 3879229 c.-722A>G upstream_gene_variant 0.4 rifampicin
rpoA 3879232 c.-725A>G upstream_gene_variant 0.38 rifampicin
ddn 3986636 c.-208C>G upstream_gene_variant 0.47 pretomanid
delamanid
ddn 3986648 c.-196C>G upstream_gene_variant 0.44 pretomanid
delamanid
clpC1 4038278 c.2427T>C synonymous_variant 0.24 pyrazinamide
clpC1 4038293 c.2412G>C synonymous_variant 0.31 pyrazinamide
clpC1 4038302 c.2403C>G synonymous_variant 0.32 pyrazinamide
clpC1 4038308 p.Val799Ile missense_variant 0.29 pyrazinamide
clpC1 4038314 c.2391T>C synonymous_variant 0.3 pyrazinamide
clpC1 4038317 c.2388G>C synonymous_variant 0.29 pyrazinamide
clpC1 4038320 c.2385G>C synonymous_variant 0.32 pyrazinamide
clpC1 4038356 c.2349T>C synonymous_variant 0.4 pyrazinamide
clpC1 4038359 c.2346A>G synonymous_variant 0.37 pyrazinamide
clpC1 4038368 c.2337T>C synonymous_variant 0.39 pyrazinamide
clpC1 4038388 c.2317T>C synonymous_variant 0.42 pyrazinamide
clpC1 4038392 c.2313C>T synonymous_variant 0.44 pyrazinamide
clpC1 4038398 c.2307G>T synonymous_variant 0.42 pyrazinamide
clpC1 4038403 c.2302T>C synonymous_variant 0.42 pyrazinamide Not assoc w R - Interim
clpC1 4038407 c.2298G>C synonymous_variant 0.43 pyrazinamide
clpC1 4038419 c.2286T>C synonymous_variant 0.39 pyrazinamide
clpC1 4038433 c.2272C>T synonymous_variant 0.31 pyrazinamide
clpC1 4038434 c.2271G>A synonymous_variant 0.28 pyrazinamide
clpC1 4038456 p.Val750Glu missense_variant 0.51 pyrazinamide
clpC1 4038460 p.Leu749Met missense_variant 0.58 pyrazinamide
clpC1 4038486 p.Gly740Asn missense_variant 0.57 pyrazinamide
clpC1 4038489 p.Ala739Gly missense_variant 0.57 pyrazinamide
clpC1 4038494 c.2211G>C synonymous_variant 0.56 pyrazinamide
clpC1 4038497 p.Ser736Gln missense_variant 0.56 pyrazinamide
clpC1 4038530 p.Glu725Asp missense_variant 0.6 pyrazinamide
clpC1 4038596 c.2109A>G synonymous_variant 0.7 pyrazinamide
clpC1 4038623 c.2082A>G synonymous_variant 0.62 pyrazinamide
clpC1 4038640 p.Asp689Asn missense_variant 0.72 pyrazinamide
clpC1 4038653 c.2052C>T synonymous_variant 0.71 pyrazinamide
clpC1 4038658 p.Lys683Gln missense_variant 0.67 pyrazinamide
clpC1 4038661 p.Ser682Thr missense_variant 0.67 pyrazinamide
clpC1 4038662 c.2043T>C synonymous_variant 0.67 pyrazinamide
clpC1 4038671 c.2034T>C synonymous_variant 0.68 pyrazinamide
clpC1 4038683 c.2022T>C synonymous_variant 0.7 pyrazinamide Not assoc w R - Interim
clpC1 4038695 c.2010C>G synonymous_variant 0.69 pyrazinamide
clpC1 4038701 c.2004G>C synonymous_variant 0.65 pyrazinamide
clpC1 4038704 c.2001T>C synonymous_variant 0.62 pyrazinamide
clpC1 4038707 c.1998C>G synonymous_variant 0.62 pyrazinamide
clpC1 4038710 c.1995G>C synonymous_variant 0.62 pyrazinamide
clpC1 4038713 c.1992T>C synonymous_variant 0.63 pyrazinamide
clpC1 4038749 c.1956C>G synonymous_variant 0.57 pyrazinamide
clpC1 4038755 c.1950G>T synonymous_variant 0.53 pyrazinamide
clpC1 4038770 c.1935C>T synonymous_variant 0.56 pyrazinamide
clpC1 4038773 c.1932T>C synonymous_variant 0.56 pyrazinamide
clpC1 4038782 c.1923G>C synonymous_variant 0.56 pyrazinamide
clpC1 4038812 c.1893T>C synonymous_variant 0.59 pyrazinamide
clpC1 4038821 c.1884G>A synonymous_variant 0.59 pyrazinamide
clpC1 4038845 c.1860G>C synonymous_variant 0.62 pyrazinamide
clpC1 4038860 c.1845G>C synonymous_variant 0.58 pyrazinamide Not assoc w R - Interim
clpC1 4038878 c.1827A>G synonymous_variant 0.54 pyrazinamide Not assoc w R - Interim
clpC1 4038908 c.1797C>G synonymous_variant 0.6 pyrazinamide
clpC1 4038914 c.1791G>C synonymous_variant 0.59 pyrazinamide
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.55 pyrazinamide
clpC1 4038953 c.1752A>G synonymous_variant 0.56 pyrazinamide
clpC1 4038956 c.1749T>C synonymous_variant 0.56 pyrazinamide
clpC1 4038965 c.1740T>C synonymous_variant 0.59 pyrazinamide
clpC1 4038971 c.1734T>C synonymous_variant 0.6 pyrazinamide
clpC1 4038974 c.1731T>C synonymous_variant 0.62 pyrazinamide Not assoc w R - Interim
clpC1 4038989 c.1716T>C synonymous_variant 0.62 pyrazinamide
clpC1 4038997 c.1708T>C synonymous_variant 0.64 pyrazinamide Not assoc w R - Interim
clpC1 4039004 c.1701C>G synonymous_variant 0.62 pyrazinamide
clpC1 4039022 c.1683A>G synonymous_variant 0.68 pyrazinamide
clpC1 4039064 c.1641C>T synonymous_variant 0.74 pyrazinamide
clpC1 4039097 c.1608G>C synonymous_variant 0.65 pyrazinamide
clpC1 4039103 c.1602T>C synonymous_variant 0.66 pyrazinamide
clpC1 4039106 c.1599G>C synonymous_variant 0.65 pyrazinamide
clpC1 4039112 c.1593C>G synonymous_variant 0.65 pyrazinamide
clpC1 4039121 c.1584T>C synonymous_variant 0.67 pyrazinamide
clpC1 4039142 c.1563A>G synonymous_variant 0.57 pyrazinamide
clpC1 4039145 c.1560G>C synonymous_variant 0.57 pyrazinamide
clpC1 4039169 p.Glu512Asp missense_variant 0.58 pyrazinamide
clpC1 4039172 c.1533A>G synonymous_variant 0.57 pyrazinamide
clpC1 4039178 c.1527G>C synonymous_variant 0.59 pyrazinamide
clpC1 4039183 c.1522T>C synonymous_variant 0.55 pyrazinamide
clpC1 4039186 c.1519C>T synonymous_variant 0.57 pyrazinamide
clpC1 4039226 c.1479T>C synonymous_variant 0.47 pyrazinamide Not assoc w R - Interim
clpC1 4039229 c.1476C>G synonymous_variant 0.51 pyrazinamide
clpC1 4039274 c.1431G>C synonymous_variant 0.48 pyrazinamide Not assoc w R - Interim
clpC1 4039286 c.1419T>C synonymous_variant 0.48 pyrazinamide
clpC1 4039295 c.1410A>C synonymous_variant 0.49 pyrazinamide
clpC1 4039298 c.1407T>C synonymous_variant 0.49 pyrazinamide
clpC1 4039319 c.1386T>C synonymous_variant 0.47 pyrazinamide Not assoc w R - Interim
clpC1 4039322 c.1383T>C synonymous_variant 0.47 pyrazinamide
clpC1 4039328 c.1377A>C synonymous_variant 0.41 pyrazinamide
clpC1 4039331 c.1374C>G synonymous_variant 0.45 pyrazinamide
clpC1 4039337 p.Thr456Gln missense_variant 0.4 pyrazinamide
clpC1 4039349 c.1356C>T synonymous_variant 0.42 pyrazinamide
clpC1 4039352 c.1353C>G synonymous_variant 0.48 pyrazinamide
clpC1 4039364 c.1341C>G synonymous_variant 0.39 pyrazinamide
clpC1 4039391 c.1314T>G synonymous_variant 0.26 pyrazinamide
clpC1 4039397 c.1308A>G synonymous_variant 0.26 pyrazinamide
clpC1 4039409 c.1296T>C synonymous_variant 0.3 pyrazinamide
clpC1 4039412 c.1293T>G synonymous_variant 0.3 pyrazinamide
clpC1 4039415 p.Glu430Asp missense_variant 0.3 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 0.33 pyrazinamide
clpC1 4039442 c.1263A>G synonymous_variant 0.32 pyrazinamide
clpC1 4039454 c.1251A>G synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
clpC1 4039463 c.1242C>G synonymous_variant 0.37 pyrazinamide
clpC1 4039466 c.1239T>C synonymous_variant 0.37 pyrazinamide
clpC1 4039469 c.1236T>C synonymous_variant 0.35 pyrazinamide
clpC1 4039480 c.1225C>A synonymous_variant 0.35 pyrazinamide
clpC1 4039481 c.1224T>G synonymous_variant 0.35 pyrazinamide Not assoc w R - Interim
clpC1 4039517 c.1188C>G synonymous_variant 0.36 pyrazinamide
clpC1 4039556 c.1149G>C synonymous_variant 0.58 pyrazinamide
clpC1 4039559 c.1146C>G synonymous_variant 0.59 pyrazinamide
clpC1 4039562 c.1143C>G synonymous_variant 0.59 pyrazinamide
clpC1 4039565 c.1140G>C synonymous_variant 0.59 pyrazinamide
clpC1 4039570 p.Met379Leu missense_variant 0.67 pyrazinamide Uncertain significance
clpC1 4039576 p.Ala377Pro missense_variant 0.67 pyrazinamide
clpC1 4039577 c.1128T>C synonymous_variant 0.64 pyrazinamide Not assoc w R - Interim
clpC1 4039589 c.1116G>C synonymous_variant 0.68 pyrazinamide
clpC1 4039610 c.1095G>C synonymous_variant 0.62 pyrazinamide
clpC1 4039616 c.1089G>C synonymous_variant 0.61 pyrazinamide
clpC1 4039622 c.1083C>T synonymous_variant 0.6 pyrazinamide
clpC1 4039625 c.1080G>A synonymous_variant 0.57 pyrazinamide
clpC1 4039661 c.1044T>G synonymous_variant 0.66 pyrazinamide
clpC1 4039664 c.1041G>C synonymous_variant 0.68 pyrazinamide
clpC1 4039694 c.1011G>C synonymous_variant 0.56 pyrazinamide
clpC1 4039724 c.981A>G synonymous_variant 0.71 pyrazinamide
clpC1 4039751 c.954A>G synonymous_variant 0.72 pyrazinamide
clpC1 4039757 c.948A>G synonymous_variant 0.72 pyrazinamide
clpC1 4039760 c.945T>C synonymous_variant 0.72 pyrazinamide
clpC1 4039766 c.939T>C synonymous_variant 0.63 pyrazinamide
clpC1 4039769 c.936C>G synonymous_variant 0.61 pyrazinamide
clpC1 4039775 c.930G>C synonymous_variant 0.66 pyrazinamide
clpC1 4039778 c.927A>G synonymous_variant 0.67 pyrazinamide
clpC1 4039781 c.924G>C synonymous_variant 0.68 pyrazinamide
clpC1 4039790 c.915C>G synonymous_variant 0.69 pyrazinamide
clpC1 4039817 c.888A>C synonymous_variant 0.62 pyrazinamide Not assoc w R - Interim
clpC1 4039820 c.885T>G synonymous_variant 0.62 pyrazinamide
clpC1 4039826 c.879C>G synonymous_variant 0.65 pyrazinamide
clpC1 4039831 c.874T>C synonymous_variant 0.67 pyrazinamide
clpC1 4039850 c.855T>C synonymous_variant 0.52 pyrazinamide
clpC1 4039865 c.840T>C synonymous_variant 0.51 pyrazinamide
clpC1 4039898 c.807C>G synonymous_variant 0.49 pyrazinamide
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.49 pyrazinamide
clpC1 4039931 c.774T>C synonymous_variant 0.48 pyrazinamide
clpC1 4039937 c.768G>C synonymous_variant 0.51 pyrazinamide
clpC1 4039946 c.759A>C synonymous_variant 0.56 pyrazinamide
clpC1 4039952 c.753T>C synonymous_variant 0.56 pyrazinamide
clpC1 4039979 c.726C>G synonymous_variant 0.59 pyrazinamide
clpC1 4039988 c.717C>G synonymous_variant 0.53 pyrazinamide
clpC1 4039991 c.714G>C synonymous_variant 0.59 pyrazinamide
clpC1 4040021 c.684A>C synonymous_variant 0.57 pyrazinamide Not assoc w R - Interim
clpC1 4040024 c.681A>G synonymous_variant 0.56 pyrazinamide
clpC1 4040033 c.672G>C synonymous_variant 0.6 pyrazinamide
clpC1 4040036 c.669C>G synonymous_variant 0.59 pyrazinamide
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.71 pyrazinamide
clpC1 4040093 c.612C>G synonymous_variant 0.71 pyrazinamide Not assoc w R - Interim
clpC1 4040105 c.600C>G synonymous_variant 0.74 pyrazinamide
clpC1 4040147 c.558A>G synonymous_variant 0.66 pyrazinamide Not assoc w R - Interim
clpC1 4040162 c.543G>C synonymous_variant 0.48 pyrazinamide Not assoc w R - Interim
clpC1 4040165 c.540G>C synonymous_variant 0.48 pyrazinamide
clpC1 4040171 c.534C>G synonymous_variant 0.52 pyrazinamide
clpC1 4040249 c.456A>G synonymous_variant 0.36 pyrazinamide
clpC1 4040267 c.438A>G synonymous_variant 0.49 pyrazinamide Not assoc w R - Interim
clpC1 4040273 c.432T>C synonymous_variant 0.45 pyrazinamide Not assoc w R - Interim
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.44 pyrazinamide
clpC1 4040279 c.426C>G synonymous_variant 0.45 pyrazinamide Not assoc w R - Interim
clpC1 4040291 c.414G>C synonymous_variant 0.46 pyrazinamide
clpC1 4040318 c.387C>G synonymous_variant 0.41 pyrazinamide
clpC1 4040330 c.375C>G synonymous_variant 0.43 pyrazinamide
clpC1 4040342 c.363C>G synonymous_variant 0.41 pyrazinamide
clpC1 4040354 c.351A>G synonymous_variant 0.38 pyrazinamide
clpC1 4040363 c.342A>T synonymous_variant 0.29 pyrazinamide
clpC1 4040369 c.336C>G synonymous_variant 0.3 pyrazinamide
clpC1 4040380 c.325T>C synonymous_variant 0.26 pyrazinamide
clpC1 4040411 c.294T>C synonymous_variant 0.37 pyrazinamide Not assoc w R - Interim
clpC1 4040423 c.282A>G synonymous_variant 0.39 pyrazinamide Not assoc w R - Interim
clpC1 4040426 c.279T>C synonymous_variant 0.39 pyrazinamide
clpC1 4040431 c.274T>C synonymous_variant 0.41 pyrazinamide
clpC1 4040444 c.261C>T synonymous_variant 0.43 pyrazinamide
clpC1 4040450 c.255A>G synonymous_variant 0.45 pyrazinamide Not assoc w R - Interim
clpC1 4040459 c.246C>G synonymous_variant 0.44 pyrazinamide
clpC1 4040465 c.240T>C synonymous_variant 0.49 pyrazinamide
clpC1 4040471 c.234T>C synonymous_variant 0.51 pyrazinamide Not assoc w R - Interim
clpC1 4040477 c.228G>C synonymous_variant 0.56 pyrazinamide
clpC1 4040480 c.225T>G synonymous_variant 0.59 pyrazinamide
clpC1 4040501 c.204C>T synonymous_variant 0.52 pyrazinamide Not assoc w R - Interim
clpC1 4040522 c.183T>C synonymous_variant 0.43 pyrazinamide Not assoc w R - Interim
clpC1 4040528 c.177G>C synonymous_variant 0.44 pyrazinamide
clpC1 4040531 c.174T>C synonymous_variant 0.38 pyrazinamide
clpC1 4040534 c.171A>G synonymous_variant 0.36 pyrazinamide Not assoc w R - Interim
clpC1 4040537 c.168G>C synonymous_variant 0.36 pyrazinamide
clpC1 4040546 c.159G>C synonymous_variant 0.33 pyrazinamide
clpC1 4040551 c.154T>C synonymous_variant 0.34 pyrazinamide Not assoc w R - Interim
clpC1 4040561 c.144A>G synonymous_variant 0.28 pyrazinamide
clpC1 4040644 c.61A>C synonymous_variant 0.36 pyrazinamide
clpC1 4040654 c.51G>A synonymous_variant 0.35 pyrazinamide
clpC1 4040657 c.48T>G synonymous_variant 0.33 pyrazinamide Not assoc w R - Interim
clpC1 4040695 c.10C>A synonymous_variant 0.3 pyrazinamide
clpC1 4040699 c.6C>T synonymous_variant 0.29 pyrazinamide
clpC1 4040706 c.-4_-3delAC upstream_gene_variant 0.25 pyrazinamide
clpC1 4040711 c.-7G>A upstream_gene_variant 0.24 pyrazinamide
clpC1 4040728 c.-24G>T upstream_gene_variant 0.23 pyrazinamide Uncertain significance
panD 4043865 p.Gly139Arg missense_variant 0.32 pyrazinamide Uncertain significance
panD 4043872 p.Gly137Val missense_variant 0.33 pyrazinamide Uncertain significance
panD 4043876 p.Leu136Ile missense_variant 0.35 pyrazinamide
panD 4043883 c.399C>T synonymous_variant 0.35 pyrazinamide
panD 4043886 c.396A>G synonymous_variant 0.32 pyrazinamide
panD 4043896 p.Gly129Ala missense_variant 0.36 pyrazinamide
panD 4043903 p.Asn127Asp missense_variant 0.33 pyrazinamide
panD 4043913 c.369T>C synonymous_variant 0.32 pyrazinamide
panD 4043916 c.366A>G synonymous_variant 0.33 pyrazinamide
panD 4043922 c.360T>C synonymous_variant 0.36 pyrazinamide
panD 4044072 c.210C>G synonymous_variant 0.25 pyrazinamide
panD 4044075 c.207T>C synonymous_variant 0.25 pyrazinamide
panD 4044081 c.201T>C synonymous_variant 0.26 pyrazinamide
panD 4044084 c.198T>C synonymous_variant 0.26 pyrazinamide
panD 4044105 c.177G>C synonymous_variant 0.27 pyrazinamide
panD 4044117 c.165G>C synonymous_variant 0.28 pyrazinamide
panD 4044120 c.162A>C synonymous_variant 0.3 pyrazinamide
panD 4044123 c.159T>C synonymous_variant 0.29 pyrazinamide
panD 4044126 c.156T>C synonymous_variant 0.3 pyrazinamide
panD 4044712 c.-431C>A upstream_gene_variant 0.38 pyrazinamide
panD 4044725 c.-444C>T upstream_gene_variant 0.41 pyrazinamide
panD 4044737 c.-456T>C upstream_gene_variant 0.4 pyrazinamide
panD 4044746 c.-467_-465delGTGinsATC upstream_gene_variant 0.45 pyrazinamide
panD 4044752 c.-471T>C upstream_gene_variant 0.47 pyrazinamide
panD 4044758 c.-477C>T upstream_gene_variant 0.51 pyrazinamide
panD 4044779 c.-500_-498delCTAinsTGC upstream_gene_variant 0.57 pyrazinamide
panD 4044788 c.-507G>C upstream_gene_variant 0.58 pyrazinamide
panD 4044791 c.-510G>C upstream_gene_variant 0.61 pyrazinamide
panD 4044800 c.-519C>G upstream_gene_variant 0.56 pyrazinamide
panD 4044812 c.-531A>C upstream_gene_variant 0.54 pyrazinamide
panD 4044818 c.-538_-537delCGinsAC upstream_gene_variant 0.51 pyrazinamide
panD 4044823 c.-542G>C upstream_gene_variant 0.52 pyrazinamide
panD 4044844 c.-563T>C upstream_gene_variant 0.5 pyrazinamide
panD 4044848 c.-567T>G upstream_gene_variant 0.5 pyrazinamide
panD 4044854 c.-573A>G upstream_gene_variant 0.49 pyrazinamide
panD 4044860 c.-579C>G upstream_gene_variant 0.47 pyrazinamide
panD 4044872 c.-591C>G upstream_gene_variant 0.23 pyrazinamide
panD 4045019 c.-738G>C upstream_gene_variant 0.51 pyrazinamide
panD 4045022 c.-741C>G upstream_gene_variant 0.53 pyrazinamide
panD 4045028 c.-747C>G upstream_gene_variant 0.54 pyrazinamide
panD 4045034 c.-753A>C upstream_gene_variant 0.56 pyrazinamide
panD 4045055 c.-774T>G upstream_gene_variant 0.56 pyrazinamide
panD 4045067 c.-786C>G upstream_gene_variant 0.56 pyrazinamide
panD 4045070 c.-789C>T upstream_gene_variant 0.57 pyrazinamide
panD 4045076 c.-795A>C upstream_gene_variant 0.52 pyrazinamide
panD 4045088 c.-807T>C upstream_gene_variant 0.52 pyrazinamide
panD 4045094 c.-813T>C upstream_gene_variant 0.49 pyrazinamide
panD 4045097 c.-816T>C upstream_gene_variant 0.46 pyrazinamide
panD 4045105 c.-824T>C upstream_gene_variant 0.46 pyrazinamide
panD 4045112 c.-831A>G upstream_gene_variant 0.35 pyrazinamide
glpK 4138418 c.1338T>C synonymous_variant 0.28 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138424 c.1332T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138429 c.1327T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138451 c.1305T>C synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138460 c.1296C>T synonymous_variant 0.24 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138472 c.1284G>T synonymous_variant 0.23 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138475 c.1281C>T synonymous_variant 0.23 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138478 c.1278T>C synonymous_variant 0.22 levofloxacin Not assoc w R - Interim
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138481 c.1275G>C synonymous_variant 0.23 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138490 c.1266G>T synonymous_variant 0.2 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138580 c.1176C>T synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138598 c.1158G>A synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138601 c.1155G>C synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138606 c.1150T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138607 c.1149G>A synonymous_variant 0.28 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138610 c.1146C>G synonymous_variant 0.28 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138622 c.1134C>G synonymous_variant 0.46 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138625 c.1131G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138643 c.1113A>C synonymous_variant 0.42 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138646 c.1110G>C synonymous_variant 0.44 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138654 c.1102C>T synonymous_variant 0.47 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138670 c.1086G>C synonymous_variant 0.49 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138679 p.Met359Val missense_variant 0.49 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138695 p.Pro354Asp missense_variant 0.57 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138718 c.1038T>C synonymous_variant 0.6 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138721 c.1035G>A synonymous_variant 0.53 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138724 c.1032A>G synonymous_variant 0.53 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138730 c.1026C>G synonymous_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138757 c.999A>G synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138763 c.993G>A synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138769 c.987G>C synonymous_variant 0.48 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138774 p.Ser328Ala missense_variant 0.45 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138778 c.978C>G synonymous_variant 0.45 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138808 c.948G>T synonymous_variant 0.26 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138817 c.939T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138822 p.Asn312Asp missense_variant 0.25 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139126 c.630G>C synonymous_variant 0.38 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139132 c.624A>C synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4139135 p.Asp207Asn missense_variant 0.42 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139143 c.613T>C synonymous_variant 0.49 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139165 c.591A>G synonymous_variant 0.54 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139168 c.588T>C synonymous_variant 0.54 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139177 c.579T>C synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139183 c.573T>C synonymous_variant 0.54 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139186 c.570G>C synonymous_variant 0.54 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4139195 c.561G>T synonymous_variant 0.5 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4139198 c.558C>G synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4139207 c.549T>C synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139561 c.195G>A synonymous_variant 0.43 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139581 p.Asn59Asp missense_variant 0.44 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
isoniazid Uncertain significance
streptomycin Uncertain significance
rifampicin Uncertain significance
ethambutol Uncertain significance
glpK 4139588 c.168G>C synonymous_variant 0.5 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139597 c.159C>G synonymous_variant 0.5 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139601 p.Arg52Gln missense_variant 0.5 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139611 p.Ile49Val missense_variant 0.5 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139615 c.141G>A synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol
glpK 4139651 p.His35Glu missense_variant 0.43 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139684 c.72C>G synonymous_variant 0.26 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139687 c.69C>G synonymous_variant 0.21 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
embC 4239125 c.-738C>G upstream_gene_variant 0.39 ethambutol
embC 4239129 c.-734C>T upstream_gene_variant 0.41 ethambutol
embC 4239140 c.-723G>C upstream_gene_variant 0.42 ethambutol
embC 4239141 c.-722G>A upstream_gene_variant 0.42 ethambutol Uncertain significance
embC 4239146 c.-717A>G upstream_gene_variant 0.38 ethambutol Uncertain significance
embC 4239147 c.-716T>C upstream_gene_variant 0.38 ethambutol
embC 4239156 c.-707_-706delACinsGT upstream_gene_variant 0.38 ethambutol
embC 4239161 c.-702A>G upstream_gene_variant 0.38 ethambutol
embC 4239165 c.-698C>T upstream_gene_variant 0.38 ethambutol
embC 4239173 c.-690T>C upstream_gene_variant 0.38 ethambutol
embC 4239176 c.-687C>G upstream_gene_variant 0.39 ethambutol
embC 4239336 c.-527_-525delTTGinsCTA upstream_gene_variant 0.38 ethambutol
embC 4239341 c.-522G>C upstream_gene_variant 0.42 ethambutol
embC 4239344 c.-519G>C upstream_gene_variant 0.44 ethambutol
embC 4239350 c.-513G>C upstream_gene_variant 0.41 ethambutol
embC 4240669 c.807G>C synonymous_variant 0.29 ethambutol
embC 4240671 p.Thr270Ile missense_variant 0.29 ethambutol Not assoc w R
embC 4240677 p.Gly272Ala missense_variant 0.29 ethambutol
embC 4240685 p.Thr275Ala missense_variant 0.3 ethambutol
embC 4240693 c.831T>G synonymous_variant 0.32 ethambutol
embC 4240699 c.837C>G synonymous_variant 0.34 ethambutol Not assoc w R - Interim
embC 4240726 c.864G>C synonymous_variant 0.41 ethambutol Not assoc w R - Interim
embC 4240780 c.918T>C synonymous_variant 0.65 ethambutol
embC 4240783 c.921G>C synonymous_variant 0.65 ethambutol
embC 4240789 c.927T>C synonymous_variant 0.63 ethambutol
embC 4240819 c.957A>G synonymous_variant 0.58 ethambutol
embC 4240828 c.966G>C synonymous_variant 0.59 ethambutol
embC 4240831 c.969T>G synonymous_variant 0.55 ethambutol
embC 4240867 c.1005T>C synonymous_variant 0.51 ethambutol
embC 4240870 c.1008T>C synonymous_variant 0.5 ethambutol
embC 4240873 c.1011C>G synonymous_variant 0.51 ethambutol
embC 4240879 c.1017G>C synonymous_variant 0.47 ethambutol
embC 4240880 p.Ala340Thr missense_variant 0.46 ethambutol Uncertain significance
embC 4240885 c.1023T>C synonymous_variant 0.42 ethambutol
embC 4240897 c.1035C>G synonymous_variant 0.5 ethambutol Not assoc w R
embC 4240898 c.1036_1038delCTAinsTTG synonymous_variant 0.5 ethambutol
embC 4240903 c.1041C>G synonymous_variant 0.44 ethambutol
embC 4240911 p.Ala350Val missense_variant 0.42 ethambutol
embC 4240921 c.1059C>G synonymous_variant 0.42 ethambutol
embC 4240924 c.1062C>G synonymous_variant 0.38 ethambutol
embC 4240936 c.1074A>G synonymous_variant 0.28 ethambutol
embC 4240996 c.1134G>C synonymous_variant 0.28 ethambutol
embC 4241002 c.1140G>C synonymous_variant 0.35 ethambutol
embC 4241013 p.Met384Thr missense_variant 0.35 ethambutol
embC 4241017 c.1155T>C synonymous_variant 0.35 ethambutol
embC 4241023 c.1161T>G synonymous_variant 0.38 ethambutol
embC 4241032 c.1170G>C synonymous_variant 0.4 ethambutol
embC 4241038 c.1176G>C synonymous_variant 0.41 ethambutol
embC 4241047 c.1185C>G synonymous_variant 0.46 ethambutol
embC 4241050 c.1188T>G synonymous_variant 0.49 ethambutol
embC 4241053 c.1191G>C synonymous_variant 0.49 ethambutol
embC 4241089 c.1227C>G synonymous_variant 0.54 ethambutol
embC 4241095 c.1233C>T synonymous_variant 0.53 ethambutol
embC 4241107 c.1245G>C synonymous_variant 0.56 ethambutol
embC 4241140 c.1278A>G synonymous_variant 0.62 ethambutol Not assoc w R - Interim
embC 4241146 c.1284C>G synonymous_variant 0.64 ethambutol
embC 4241158 c.1296T>C synonymous_variant 0.61 ethambutol
embC 4241161 c.1299C>G synonymous_variant 0.61 ethambutol Not assoc w R - Interim
embC 4241162 c.1300T>C synonymous_variant 0.61 ethambutol
embC 4241170 c.1308G>C synonymous_variant 0.59 ethambutol
embC 4241173 c.1311C>T synonymous_variant 0.6 ethambutol
embC 4241203 c.1341T>C synonymous_variant 0.51 ethambutol
embC 4241206 c.1344G>C synonymous_variant 0.5 ethambutol Not assoc w R - Interim
embC 4241449 c.1587C>G synonymous_variant 0.4 ethambutol
embC 4241453 p.Ile531Val missense_variant 0.4 ethambutol
embC 4241479 c.1617C>G synonymous_variant 0.42 ethambutol
embC 4241480 c.1618T>C synonymous_variant 0.43 ethambutol
embC 4241488 c.1626G>C synonymous_variant 0.44 ethambutol
embC 4241496 p.Ala545Gly missense_variant 0.48 ethambutol
embC 4241500 c.1638A>C synonymous_variant 0.45 ethambutol
embC 4241501 p.Ser547Thr missense_variant 0.46 ethambutol
embC 4241506 c.1644G>C synonymous_variant 0.46 ethambutol
embC 4241518 c.1656A>G synonymous_variant 0.44 ethambutol
embC 4241521 c.1659T>C synonymous_variant 0.44 ethambutol Not assoc w R - Interim
embC 4241530 c.1668C>A synonymous_variant 0.39 ethambutol
embC 4241536 c.1674A>G synonymous_variant 0.32 ethambutol
embC 4241539 c.1677T>C synonymous_variant 0.31 ethambutol Not assoc w R - Interim
embC 4241545 c.1683T>C synonymous_variant 0.38 ethambutol
embC 4241548 c.1686T>C synonymous_variant 0.33 ethambutol
embC 4241551 c.1689A>G synonymous_variant 0.41 ethambutol
embC 4241567 p.Ile569Val missense_variant 0.44 ethambutol
embC 4241572 c.1710C>G synonymous_variant 0.44 ethambutol
embC 4241578 c.1716G>C synonymous_variant 0.44 ethambutol
embC 4241584 c.1722T>C synonymous_variant 0.46 ethambutol
embC 4241587 c.1725C>G synonymous_variant 0.5 ethambutol
embC 4241591 p.Leu577Val missense_variant 0.55 ethambutol
embC 4241611 c.1749G>C synonymous_variant 0.52 ethambutol
embC 4241614 c.1752A>C synonymous_variant 0.52 ethambutol
embC 4241626 c.1764T>C synonymous_variant 0.58 ethambutol
embC 4241635 c.1773G>C synonymous_variant 0.56 ethambutol
embC 4241727 p.Phe622Tyr missense_variant 0.38 ethambutol
embC 4241741 p.Val627Leu missense_variant 0.36 ethambutol
embC 4241747 p.Val629Leu missense_variant 0.41 ethambutol
embC 4241750 p.Leu630Val missense_variant 0.38 ethambutol
embC 4241755 c.1893C>G synonymous_variant 0.35 ethambutol
embC 4241770 c.1908T>C synonymous_variant 0.41 ethambutol Not assoc w R - Interim
embC 4241791 c.1929G>C synonymous_variant 0.38 ethambutol
embC 4241794 c.1932C>G synonymous_variant 0.37 ethambutol
embC 4241797 c.1935C>T synonymous_variant 0.35 ethambutol
embC 4241809 c.1947A>C synonymous_variant 0.29 ethambutol
embC 4242643 c.2781C>T synonymous_variant 1.0 ethambutol Not assoc w R
embC 4242710 p.Gln950Glu missense_variant 0.35 ethambutol
embC 4242715 c.2853T>C synonymous_variant 0.38 ethambutol Not assoc w R - Interim
embA 4242742 c.-491C>G upstream_gene_variant 0.46 ethambutol
embA 4242748 c.-485A>G upstream_gene_variant 0.52 ethambutol
embA 4242754 c.-479G>C upstream_gene_variant 0.57 ethambutol
embC 4242764 p.Val968Leu missense_variant 0.56 ethambutol
embC 4242779 p.Asn973Asp missense_variant 0.54 ethambutol
embC 4242791 p.Ala977Ser missense_variant 0.52 ethambutol
embA 4242796 c.-437G>C upstream_gene_variant 0.53 ethambutol
embA 4242799 c.-434T>C upstream_gene_variant 0.5 ethambutol
embA 4242820 c.-413G>C upstream_gene_variant 0.49 ethambutol
embA 4242823 c.-410G>C upstream_gene_variant 0.48 ethambutol
embA 4242832 c.-401A>C upstream_gene_variant 0.46 ethambutol
embA 4242838 c.-395C>G upstream_gene_variant 0.43 ethambutol
embC 4242841 c.2979C>T synonymous_variant 0.38 ethambutol Not assoc w R - Interim
embA 4242844 c.-389A>G upstream_gene_variant 0.37 ethambutol
embA 4242847 c.-386C>A upstream_gene_variant 0.33 ethambutol
embA 4242859 c.-374C>T upstream_gene_variant 0.33 ethambutol
embA 4242862 c.-371A>G upstream_gene_variant 0.33 ethambutol
embC 4242863 p.Tyr1001Asn missense_variant 0.33 ethambutol
embC 4242883 c.3021C>G synonymous_variant 0.33 ethambutol Not assoc w R - Interim
embA 4242892 c.-341G>C upstream_gene_variant 0.28 ethambutol
embA 4242901 c.-332G>C upstream_gene_variant 0.27 ethambutol
embA 4243460 c.228C>T synonymous_variant 1.0 ethambutol Not assoc w R
embA 4244567 c.1335C>T synonymous_variant 0.29 ethambutol
embA 4244582 c.1350T>C synonymous_variant 0.34 ethambutol
embA 4244611 p.Ala460Gly missense_variant 0.27 ethambutol
embA 4244616 p.Ala462Ser missense_variant 0.22 ethambutol
embA 4244619 c.1387T>C synonymous_variant 0.24 ethambutol
embA 4244625 p.Leu465Val missense_variant 0.24 ethambutol
embA 4244631 p.Thr467Leu missense_variant 0.24 ethambutol
embA 4244645 c.1413T>C synonymous_variant 0.27 ethambutol
embA 4244648 c.1416G>C synonymous_variant 0.3 ethambutol
embA 4244649 p.Asp473Ser missense_variant 0.3 ethambutol
embA 4244670 p.Ala480Leu missense_variant 0.23 ethambutol
embA 4245044 c.1812G>C synonymous_variant 0.2 ethambutol
embA 4245053 c.1821G>C synonymous_variant 0.2 ethambutol
embA 4245083 c.1851A>C synonymous_variant 0.31 ethambutol
embA 4245089 c.1857G>C synonymous_variant 0.36 ethambutol
embA 4245092 c.1860C>G synonymous_variant 0.38 ethambutol
embA 4245101 c.1869G>C synonymous_variant 0.42 ethambutol
embA 4245137 c.1905T>C synonymous_variant 0.52 ethambutol
embA 4245146 c.1914G>A synonymous_variant 0.55 ethambutol
embA 4245149 c.1917C>G synonymous_variant 0.57 ethambutol
embA 4245153 p.Ile641Val missense_variant 0.56 ethambutol
embA 4245182 c.1950T>C synonymous_variant 0.67 ethambutol
embA 4245189 c.1957C>T synonymous_variant 0.65 ethambutol
embA 4245198 p.Leu656Ile missense_variant 0.61 ethambutol
embA 4245207 c.1975T>C synonymous_variant 0.58 ethambutol
embA 4245215 c.1983A>C synonymous_variant 0.54 ethambutol
embA 4245222 p.Tyr664Gln missense_variant 0.52 ethambutol
embA 4245248 c.2016G>C synonymous_variant 0.51 ethambutol
embA 4245257 c.2025A>G synonymous_variant 0.49 ethambutol
embA 4245263 c.2031A>G synonymous_variant 0.43 ethambutol Not assoc w R - Interim
embA 4245282 p.Ile684Val missense_variant 0.25 ethambutol
embA 4245285 c.2053T>C synonymous_variant 0.24 ethambutol
embA 4245290 c.2058C>G synonymous_variant 0.24 ethambutol
embA 4245293 c.2061T>G synonymous_variant 0.25 ethambutol
embA 4245296 c.2064G>C synonymous_variant 0.24 ethambutol
embA 4245299 c.2067A>G synonymous_variant 0.24 ethambutol
embA 4245315 p.Val695Thr missense_variant 0.33 ethambutol
embA 4245328 p.Ala699Val missense_variant 0.26 ethambutol
embA 4245340 p.Gly703Ala missense_variant 0.24 ethambutol
embA 4245345 p.Met705Leu missense_variant 0.25 ethambutol
embA 4245348 p.Ala706Thr missense_variant 0.25 ethambutol
embA 4245355 p.Ala708Gly missense_variant 0.25 ethambutol
embA 4245693 p.Ile821Val missense_variant 0.63 ethambutol
embB 4245701 c.-813G>C upstream_gene_variant 0.63 ethambutol
embB 4245704 c.-810G>C upstream_gene_variant 0.6 ethambutol
embB 4245725 c.-789A>G upstream_gene_variant 0.65 ethambutol
embB 4245726 c.-788T>C upstream_gene_variant 0.65 ethambutol
embB 4245737 c.-777A>C upstream_gene_variant 0.65 ethambutol
embB 4245740 c.-774T>C upstream_gene_variant 0.62 ethambutol
embB 4245764 c.-750G>C upstream_gene_variant 0.45 ethambutol
embA 4245772 p.Asn847Thr missense_variant 0.38 ethambutol
embA 4245785 c.2553G>C synonymous_variant 0.3 ethambutol Not assoc w R - Interim
embB 4245807 c.-707T>C upstream_gene_variant 0.25 ethambutol
embB 4245833 c.-681G>C upstream_gene_variant 0.29 ethambutol
embB 4245842 c.-672G>C upstream_gene_variant 0.31 ethambutol
embB 4245845 c.-669T>C upstream_gene_variant 0.31 ethambutol
embB 4245851 c.-663G>C upstream_gene_variant 0.31 ethambutol
embB 4245860 c.-654C>G upstream_gene_variant 0.31 ethambutol
embB 4246040 c.-474C>G upstream_gene_variant 0.33 ethambutol
embA 4246041 p.Asp937Asn missense_variant 0.3 ethambutol
embB 4246184 c.-330A>C upstream_gene_variant 0.4 ethambutol
embB 4246196 c.-318C>G upstream_gene_variant 0.39 ethambutol
embB 4246205 c.-309A>G upstream_gene_variant 0.41 ethambutol
embB 4246211 c.-303T>C upstream_gene_variant 0.41 ethambutol
embB 4246217 c.-297G>A upstream_gene_variant 0.41 ethambutol
embA 4246220 c.2988T>C synonymous_variant 0.41 ethambutol Not assoc w R - Interim
embB 4246223 c.-291C>T upstream_gene_variant 0.41 ethambutol
embA 4246227 p.Ile999Val missense_variant 0.41 ethambutol
embA 4246235 c.3003G>A synonymous_variant 0.5 ethambutol Not assoc w R - Interim
embA 4246242 p.Gln1004Gly missense_variant 0.5 ethambutol
embB 4246250 c.-264G>C upstream_gene_variant 0.59 ethambutol
embB 4246256 c.-258G>T upstream_gene_variant 0.57 ethambutol
embA 4246264 p.His1011Arg missense_variant 0.54 ethambutol
embB 4246292 c.-222A>G upstream_gene_variant 0.38 ethambutol
embA 4246305 p.Ser1025Glu missense_variant 0.34 ethambutol
embA 4246308 p.Thr1026Ala missense_variant 0.35 ethambutol
embB 4246316 c.-198T>G upstream_gene_variant 0.4 ethambutol
embB 4246319 c.-195G>C upstream_gene_variant 0.38 ethambutol
embA 4246329 p.Thr1033Leu missense_variant 0.35 ethambutol
embB 4246349 c.-165C>G upstream_gene_variant 0.33 ethambutol
embB 4247425 c.912G>C synonymous_variant 0.31 ethambutol
embB 4247434 c.921C>G synonymous_variant 0.36 ethambutol
embB 4247437 c.924A>G synonymous_variant 0.36 ethambutol Not assoc w R - Interim
embB 4247440 c.927C>G synonymous_variant 0.35 ethambutol
embB 4247446 c.933C>T synonymous_variant 0.36 ethambutol
embB 4247464 c.951C>G synonymous_variant 0.47 ethambutol
embB 4247470 c.957T>C synonymous_variant 0.49 ethambutol
embB 4247491 c.978G>C synonymous_variant 0.51 ethambutol
embB 4247497 c.984T>C synonymous_variant 0.51 ethambutol
embB 4247512 c.999T>C synonymous_variant 0.48 ethambutol
embB 4247539 c.1026T>C synonymous_variant 0.54 ethambutol
embB 4247554 c.1041T>C synonymous_variant 0.5 ethambutol
embB 4247566 c.1053C>A synonymous_variant 0.45 ethambutol
embB 4247572 c.1059A>G synonymous_variant 0.44 ethambutol
embB 4247579 p.Ala356Phe missense_variant 0.38 ethambutol
embB 4247587 c.1074G>A synonymous_variant 0.32 ethambutol
embB 4247603 c.1090C>T synonymous_variant 0.34 ethambutol
embB 4247683 c.1170C>G synonymous_variant 0.24 ethambutol
embB 4247692 c.1179C>G synonymous_variant 0.27 ethambutol
embB 4247746 c.1233C>T synonymous_variant 0.43 ethambutol
embB 4247761 c.1248T>C synonymous_variant 0.5 ethambutol
embB 4247773 c.1260G>A synonymous_variant 0.56 ethambutol
embB 4247776 c.1263G>T synonymous_variant 0.54 ethambutol
embB 4247797 c.1284C>G synonymous_variant 0.54 ethambutol
embB 4247800 c.1287A>T synonymous_variant 0.53 ethambutol
embB 4247803 c.1290G>C synonymous_variant 0.53 ethambutol
embB 4247815 c.1302C>G synonymous_variant 0.51 ethambutol
embB 4247819 p.Val436Ile missense_variant 0.52 ethambutol Uncertain significance
embB 4247830 c.1317A>G synonymous_variant 0.54 ethambutol Not assoc w R - Interim
embB 4247836 c.1323A>G synonymous_variant 0.5 ethambutol Not assoc w R - Interim
embB 4247839 c.1326G>C synonymous_variant 0.5 ethambutol Not assoc w R - Interim
embB 4247866 c.1353G>C synonymous_variant 0.45 ethambutol
embB 4247875 c.1362G>C synonymous_variant 0.42 ethambutol
embB 4247876 c.1363C>T synonymous_variant 0.45 ethambutol
embB 4247881 c.1368G>C synonymous_variant 0.46 ethambutol
embB 4247887 c.1374C>T synonymous_variant 0.5 ethambutol Not assoc w R - Interim
embB 4247893 c.1380C>T synonymous_variant 0.53 ethambutol
embB 4247899 p.Met462Ile missense_variant 0.55 ethambutol
embB 4247905 c.1392G>C synonymous_variant 0.54 ethambutol Not assoc w R - Interim
embB 4247909 c.1396T>C synonymous_variant 0.58 ethambutol
embB 4247932 c.1419C>G synonymous_variant 0.59 ethambutol
embB 4247940 p.Leu476Trp missense_variant 0.62 ethambutol
embB 4247945 c.1432T>C synonymous_variant 0.57 ethambutol
embB 4247951 p.Ser480Ala missense_variant 0.59 ethambutol
embB 4247956 c.1443G>C synonymous_variant 0.61 ethambutol Not assoc w R - Interim
embB 4247974 c.1461C>G synonymous_variant 0.52 ethambutol
embB 4248007 c.1494C>G synonymous_variant 0.52 ethambutol
embB 4248011 p.Ser500Arg missense_variant 0.48 ethambutol
embB 4248014 p.Thr501Ala missense_variant 0.48 ethambutol Uncertain significance
embB 4248035 p.Val508Ile missense_variant 0.43 ethambutol
embB 4248040 c.1527C>G synonymous_variant 0.44 ethambutol
embB 4248041 p.Ala510Thr missense_variant 0.44 ethambutol Uncertain significance
embB 4248044 p.Lys511Ala missense_variant 0.45 ethambutol
embB 4248070 c.1557T>C synonymous_variant 0.52 ethambutol
embB 4248085 c.1572T>C synonymous_variant 0.43 ethambutol
embB 4248097 c.1584C>G synonymous_variant 0.48 ethambutol
embB 4248130 c.1617G>C synonymous_variant 0.56 ethambutol
embB 4248133 c.1620C>G synonymous_variant 0.56 ethambutol
embB 4248139 c.1626C>G synonymous_variant 0.54 ethambutol
embB 4248142 c.1629T>C synonymous_variant 0.54 ethambutol
embB 4248143 c.1630T>C synonymous_variant 0.53 ethambutol
embB 4248157 c.1644A>G synonymous_variant 0.56 ethambutol Not assoc w R - Interim
embB 4248199 c.1686A>G synonymous_variant 0.6 ethambutol
embB 4248200 p.Ile563Val missense_variant 0.6 ethambutol
embB 4248205 c.1692C>G synonymous_variant 0.6 ethambutol
embB 4248206 p.Ser565Gly missense_variant 0.62 ethambutol Uncertain significance
embB 4248220 c.1707A>C synonymous_variant 0.6 ethambutol
embB 4248304 c.1791G>C synonymous_variant 0.7 ethambutol
embB 4248319 c.1806A>G synonymous_variant 0.74 ethambutol
embB 4248343 c.1830G>C synonymous_variant 0.7 ethambutol
embB 4248350 c.1837T>C synonymous_variant 0.63 ethambutol
embB 4248355 c.1842A>G synonymous_variant 0.64 ethambutol
embB 4248358 c.1845C>G synonymous_variant 0.58 ethambutol
embB 4248361 c.1848A>C synonymous_variant 0.55 ethambutol
embB 4248362 p.Ser617Ala missense_variant 0.55 ethambutol
embB 4248373 c.1860C>G synonymous_variant 0.56 ethambutol
embB 4248386 c.1873C>A synonymous_variant 0.54 ethambutol
embB 4248407 p.Leu632Val missense_variant 0.52 ethambutol
embB 4248410 p.Phe633Leu missense_variant 0.53 ethambutol
embB 4248419 p.Leu636Met missense_variant 0.53 ethambutol
embB 4248425 c.1912T>C synonymous_variant 0.49 ethambutol Not assoc w R - Interim
embB 4248430 c.1917T>C synonymous_variant 0.44 ethambutol
embB 4248432 p.Trp640Phe missense_variant 0.44 ethambutol
embB 4248457 c.1944T>C synonymous_variant 0.51 ethambutol
embB 4248472 c.1959T>C synonymous_variant 0.43 ethambutol
embB 4248475 c.1962G>C synonymous_variant 0.43 ethambutol
embB 4249486 c.2973T>G synonymous_variant 0.43 ethambutol
embB 4249498 c.2985G>C synonymous_variant 0.52 ethambutol
embB 4249521 p.Ala1003Val missense_variant 0.41 ethambutol
embB 4249525 c.3012T>C synonymous_variant 0.39 ethambutol Not assoc w R - Interim
embB 4249529 p.Ile1006Val missense_variant 0.41 ethambutol
embB 4249532 p.Ala1007Thr missense_variant 0.41 ethambutol Uncertain significance
embB 4249537 c.3024A>G synonymous_variant 0.41 ethambutol
embB 4249543 c.3030G>C synonymous_variant 0.41 ethambutol
embB 4249546 c.3033G>A synonymous_variant 0.42 ethambutol
embB 4249558 c.3045A>C synonymous_variant 0.48 ethambutol
embB 4249568 p.Ser1019Thr missense_variant 0.56 ethambutol
embB 4249573 c.3060T>C synonymous_variant 0.54 ethambutol
embB 4249580 p.Leu1023Met missense_variant 0.54 ethambutol
aftB 4267200 p.Trp546Val missense_variant 0.39 ethambutol
aftB 4267214 c.1623A>C synonymous_variant 0.34 ethambutol
aftB 4267241 c.1596G>C synonymous_variant 0.36 ethambutol
aftB 4267244 c.1593T>C synonymous_variant 0.35 ethambutol
aftB 4267256 c.1581C>G synonymous_variant 0.36 ethambutol
aftB 4267262 c.1575T>C synonymous_variant 0.33 ethambutol
aftB 4267266 p.Ala524Gly missense_variant 0.32 ethambutol
aftB 4267268 c.1569T>C synonymous_variant 0.32 ethambutol
aftB 4267274 c.1563G>C synonymous_variant 0.29 ethambutol
aftB 4267580 c.1257G>T synonymous_variant 0.38 ethambutol
aftB 4267604 c.1233C>G synonymous_variant 0.52 ethambutol
aftB 4267607 c.1230G>A synonymous_variant 0.55 ethambutol
aftB 4267647 p.Asp397Gly missense_variant 0.63 ethambutol Not assoc w R
aftB 4268123 p.Ser238Gly missense_variant 0.33 ethambutol
aftB 4268129 c.708T>G synonymous_variant 0.35 ethambutol
aftB 4268138 c.699A>C synonymous_variant 0.44 ethambutol Not assoc w R - Interim
aftB 4268144 c.693T>C synonymous_variant 0.46 ethambutol
aftB 4268164 p.Gln225Glu missense_variant 0.57 ethambutol
aftB 4268169 p.Ala223Gly missense_variant 0.53 ethambutol
aftB 4268171 c.666G>C synonymous_variant 0.54 ethambutol
aftB 4268179 c.658T>C synonymous_variant 0.54 ethambutol Not assoc w R - Interim
aftB 4268182 p.Phe219Leu missense_variant 0.49 ethambutol
aftB 4268183 c.654A>T synonymous_variant 0.49 ethambutol
aftB 4268193 p.Leu215Ala missense_variant 0.48 ethambutol
aftB 4268205 p.Val211Ala missense_variant 0.41 ethambutol
aftB 4268213 c.624T>G synonymous_variant 0.38 ethambutol
aftB 4268225 c.612G>C synonymous_variant 0.33 ethambutol
ethR 4327396 c.-153A>G upstream_gene_variant 0.5 ethionamide
ethA 4327399 p.Asp25Glu missense_variant 0.46 ethionamide
ethR 4327423 c.-126G>C upstream_gene_variant 0.46 ethionamide
ethR 4327435 c.-114T>G upstream_gene_variant 0.4 ethionamide
ethR 4327438 c.-111A>G upstream_gene_variant 0.4 ethionamide
ethA 4327452 p.Val8Leu missense_variant 0.3 ethionamide
ethR 4327453 c.-96A>G upstream_gene_variant 0.3 ethionamide
ethR 4327459 c.-90G>A upstream_gene_variant 0.27 ethionamide
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 kanamycin Not assoc w R
capreomycin Not assoc w R
amikacin Not assoc w R
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 kanamycin
capreomycin
amikacin
gid 4407588 c.615A>G synonymous_variant 1.0 streptomycin Not assoc w R
gid 4407620 p.Tyr195His missense_variant 1.0 streptomycin Not assoc w R
gid 4407927 p.Glu92Asp missense_variant 1.0 streptomycin Not assoc w R