Rv3457c - c.804G>C


Drug resistance types
34 Sensitive 12 RR-TB 53 HR-TB 34 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 205 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 5
lineage4.1.2.1 14
lineage4.9 90
lineage2.2.1 28
lineage3 3
35
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 7
M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 3
lineage2.1;lineage4.9 15
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 5
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
La1.7;lineage4.9 5
La1.7;lineage4.9;lineage7 3
lineage4.8 10
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.2;lineage4 1
La1.7 1
lineage4.6.1 1
lineage3.1.1 1
lineage4.6.2.2 4
La3;lineage2.2.2 1
lineage2.2.2;lineage4 1
lineage4.9;lineage9 1
lineage1.1.2;lineage4.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.4.2 2
lineage4.1.1.3 3
lineage1.1.1 1
lineage1.1.2 2
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 4
La1.8.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 3
lineage2.1;lineage4.9;lineage7 1
lineage4.3.3 2
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4 8
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.1.3.2 1
lineage4.3.4.1 2
La1.7.1;lineage4.9 1
lineage4.1 2
La3 2
lineage2.2.1;lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2;lineage4 1
lineage4.1.1.1 4
lineage4.9;lineage7 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage1;lineage4.9 1
lineage6.3.1 3
lineage4.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.7 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage6.2.3 1
lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2.2.1 1
lineage4.8.1 1
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 344
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR28351488 MDR-TB lineage2.2.1 None
SRR28044634 Other lineage3 None
SRR25827682 Other None
SRR1172857 Other None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR19295647 Sensitive lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4818615 Sensitive None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
SRR1175127 Other lineage2.2.1.2 None
SRR1173788 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1175074 Other None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR12015086 RR-TB lineage4.8 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1002679 Sensitive lineage4.8 None
SRR1196494 MDR-TB None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR4830353 Other La1.7 None
SRR5341293 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
SRR6789626 Other None
ERR4797201 Other None
ERR4800341 Other None
ERR4816999 Other None
SRR6045219 HR-TB lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4811105 HR-TB None
ERR2517514 Sensitive lineage4.8 None
ERR6358755 Other lineage4.6.1 None
ERR4811075 Other None
ERR4811142 RR-TB None
ERR9786515 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4822101 Sensitive lineage1.1.2;lineage4.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR29051093 Other lineage4.9 None
SRR29096900 Sensitive lineage4.3.4.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR11465025 Other lineage4.1.1.3 None
SRR14066533 Sensitive lineage1.1.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4816585 Other lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
SRR29055629 MDR-TB lineage2.2.1 None
SRR7496509 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR7240033 Other La1.8.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
SRR6045555 Other lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675572 Other None
SRR21732980 Other lineage4.3.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
SRR1180137 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1173562 Sensitive lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
SRR1710057 Other lineage2.1 None
ERR4815604 Other None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
SRR6045053 Other lineage4 None
ERR4820773 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1181020 Other lineage2.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR29097004 Other lineage3 None
ERR4820335 Other lineage4.1.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR29016901 Other La3;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR3675461 RR-TB lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR12015085 Other lineage4.8 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR7821123 Other lineage1.1.3.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR11465801 Other lineage4.3.4.1 None
SRR993002 HR-TB lineage4 None
ERR4811311 Other None
SRR28119753 Other lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR9786525 Other lineage4 None
ERR4815441 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR12416824 HR-TB None
ERR176779 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR4817893 Other lineage4.8 None
ERR9117721 HR-TB None
ERR9786682 Other lineage4.1.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR20969708 HR-TB lineage2.2.1 None
SRR1172728 RR-TB La3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR26399265 Other lineage2.2.1 None
SRR28119777 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046594 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR6832787 Sensitive lineage2.2.1 None
SRR1172234 Other lineage4.9 None
SRR28119811 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR11068570 Other lineage4 None
SRR29017081 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183145 Other lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28351341 Other lineage4.1.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR11252664 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR9786671 Other None
SRR6257036 Sensitive lineage4.8 None
SRR21690574 Other lineage4.1.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR1173363 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR7496517 Other None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1035157 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2 None
SRR14782054 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR181887 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3804162 Sensitive lineage6.3.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4818347 Other lineage4.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4769474 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4810741 HR-TB None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR1196546 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR9786526 Other lineage4.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819932 Sensitive lineage4.7 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
ERR9787223 Sensitive lineage6.3.1 None
SRR6044942 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR6256981 HR-TB lineage4 None
SRR29017461 Other La3;lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR12142341 HR-TB lineage2.2.1 None
ERR9787061 Sensitive lineage6.2.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
SRR1165699 Other lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR20970016 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR28119827 Other La3;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None