TB-Profiler result

Run: ERR9786440
Summary

Run ID: ERR9786440

Sample name:

Date: 02-04-2023 12:26:42

Number of reads: 3737370

Percentage reads mapped: 86.21

Strain: lineage4.1

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 0.96
lineage4.1 Euro-American T;X;H None 0.97
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247448 p.His312Arg missense_variant 0.16 ethambutol
embB 4247588 p.Leu359Ile missense_variant 0.17 ethambutol
embB 4247663 p.Tyr384Asn missense_variant 0.16 ethambutol
embB 4247676 p.Ala388Gly missense_variant 0.18 ethambutol
embB 4247708 p.Asn399Asp missense_variant 0.17 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6507 p.Ala423Val missense_variant 0.89
gyrA 6598 c.-704C>G upstream_gene_variant 0.16
gyrA 6610 c.-692C>G upstream_gene_variant 0.16
gyrA 6637 c.-665T>G upstream_gene_variant 0.16
gyrA 6640 c.-662A>G upstream_gene_variant 0.16
gyrA 6649 c.-653T>C upstream_gene_variant 0.16
gyrA 6728 c.-574C>T upstream_gene_variant 0.15
gyrA 6745 c.-557T>G upstream_gene_variant 0.16
gyrA 6751 c.-551G>C upstream_gene_variant 0.16
gyrA 6760 c.-542G>C upstream_gene_variant 0.16
gyrA 6763 c.-539G>C upstream_gene_variant 0.17
gyrA 6775 c.-527G>C upstream_gene_variant 0.17
gyrA 6793 c.-509T>C upstream_gene_variant 0.16
gyrB 6797 p.Gly520Thr missense_variant 0.16
gyrA 6808 c.-494C>T upstream_gene_variant 0.17
gyrA 6811 c.-491C>T upstream_gene_variant 0.16
gyrB 7023 p.Leu595Gln missense_variant 0.16
gyrB 7051 p.Glu604Asp missense_variant 0.16
gyrA 7108 c.-194G>A upstream_gene_variant 0.15
gyrA 7114 c.-188C>A upstream_gene_variant 0.15
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7547 c.246C>T synonymous_variant 0.14
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7622 c.321C>T synonymous_variant 0.16
gyrA 7625 c.324G>C synonymous_variant 0.16
gyrA 7631 c.330G>C synonymous_variant 0.16
gyrA 7637 c.336C>G synonymous_variant 0.17
gyrA 7652 c.351C>T synonymous_variant 0.17
gyrA 7658 c.357A>G synonymous_variant 0.17
gyrA 7664 c.363T>C synonymous_variant 0.16
gyrA 7673 c.372G>A synonymous_variant 0.16
gyrA 7739 c.438C>T synonymous_variant 0.14
gyrA 7763 c.462T>C synonymous_variant 0.16
gyrA 7772 c.471C>T synonymous_variant 0.15
gyrA 8740 p.Arg480His missense_variant 0.15
gyrA 8751 p.Ala484Ser missense_variant 0.15
gyrA 8767 p.Arg489Lys missense_variant 0.15
gyrA 8780 p.Asp493Glu missense_variant 0.17
gyrA 8786 c.1485T>C synonymous_variant 0.16
gyrA 8801 c.1500G>C synonymous_variant 0.17
gyrA 8807 c.1506C>T synonymous_variant 0.17
gyrA 8810 c.1509A>G synonymous_variant 0.16
gyrA 8816 c.1515C>G synonymous_variant 0.16
gyrA 8818 p.Ser506Asn missense_variant 0.16
gyrA 8828 c.1527T>C synonymous_variant 0.16
gyrA 8897 c.1596T>C synonymous_variant 0.16
gyrA 8903 c.1602T>C synonymous_variant 0.16
gyrA 8933 c.1632G>C synonymous_variant 0.16
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.17
gyrA 8966 c.1665C>G synonymous_variant 0.16
gyrA 8967 p.Ala556Arg missense_variant 0.16
gyrA 8987 c.1686C>A synonymous_variant 0.16
gyrA 8990 c.1689C>G synonymous_variant 0.16
gyrA 8998 p.Leu566Trp missense_variant 0.16
gyrA 9017 c.1716C>G synonymous_variant 0.17
gyrA 9023 c.1722A>G synonymous_variant 0.17
gyrA 9032 c.1731T>C synonymous_variant 0.16
gyrA 9080 c.1779G>T synonymous_variant 0.16
gyrA 9089 c.1788G>C synonymous_variant 0.16
gyrA 9101 c.1800A>G synonymous_variant 0.15
gyrA 9104 c.1803C>G synonymous_variant 0.15
gyrA 9119 c.1818A>G synonymous_variant 0.16
gyrA 9122 c.1821C>A synonymous_variant 0.17
gyrA 9143 c.1842T>C synonymous_variant 0.16
gyrA 9152 c.1851C>T synonymous_variant 0.15
gyrA 9154 p.Thr618Asn missense_variant 0.14
gyrA 9182 c.1881T>C synonymous_variant 0.17
gyrA 9191 c.1890G>C synonymous_variant 0.17
gyrA 9204 p.Ser635Thr missense_variant 0.16
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9656 c.2355C>G synonymous_variant 1.0
fgd1 490896 c.114C>T synonymous_variant 0.16
fgd1 490917 c.135C>G synonymous_variant 0.15
fgd1 490948 p.Ser56Ala missense_variant 0.15
fgd1 491013 c.231C>G synonymous_variant 0.17
fgd1 491151 c.369G>A synonymous_variant 0.14
rpoB 760181 c.375T>C synonymous_variant 0.17
rpoB 760184 c.378A>G synonymous_variant 0.17
rpoB 760196 c.390C>G synonymous_variant 0.17
rpoB 760223 c.417T>C synonymous_variant 0.16
rpoB 760235 c.429T>C synonymous_variant 0.15
rpoB 760283 c.477G>C synonymous_variant 0.22
rpoB 760298 c.492G>C synonymous_variant 0.2
rpoB 760307 c.501T>C synonymous_variant 0.2
rpoB 760310 c.504G>C synonymous_variant 0.2
rpoB 760319 c.513C>T synonymous_variant 0.21
rpoB 760328 c.522G>C synonymous_variant 0.2
rpoB 760331 c.525G>C synonymous_variant 0.19
rpoB 760340 c.534G>T synonymous_variant 0.19
rpoB 760361 c.555T>C synonymous_variant 0.2
rpoB 760370 c.564C>G synonymous_variant 0.19
rpoB 760376 p.Asp190Glu missense_variant 0.19
rpoB 760380 p.Thr192Leu missense_variant 0.18
rpoB 760406 c.600G>C synonymous_variant 0.21
rpoB 760412 c.606C>G synonymous_variant 0.21
rpoB 760424 c.618C>G synonymous_variant 0.21
rpoB 760430 c.624T>C synonymous_variant 0.21
rpoB 760475 c.669A>G synonymous_variant 0.26
rpoB 760481 c.675G>C synonymous_variant 0.27
rpoB 760484 c.678A>G synonymous_variant 0.27
rpoB 760522 p.Ser239Asn missense_variant 0.25
rpoB 760532 c.726T>C synonymous_variant 0.24
rpoB 760533 p.Val243Thr missense_variant 0.24
rpoB 760541 c.735G>C synonymous_variant 0.25
rpoB 760547 c.741G>C synonymous_variant 0.24
rpoB 760563 p.Arg253Met missense_variant 0.27
rpoB 760591 p.Val262Ala missense_variant 0.25
rpoB 760611 c.805T>C synonymous_variant 0.23
rpoB 760634 c.828T>C synonymous_variant 0.24
rpoB 760646 c.840C>G synonymous_variant 0.22
rpoB 760655 c.849A>G synonymous_variant 0.23
rpoB 760661 c.855A>C synonymous_variant 0.22
rpoB 760670 c.864G>C synonymous_variant 0.21
rpoB 760674 c.868T>C synonymous_variant 0.2
rpoB 760679 c.873A>G synonymous_variant 0.19
rpoB 760683 c.877T>C synonymous_variant 0.2
rpoB 760934 c.1128C>T synonymous_variant 0.14
rpoB 760946 c.1140A>G synonymous_variant 0.19
rpoB 760982 c.1176G>C synonymous_variant 0.22
rpoB 760985 c.1179G>C synonymous_variant 0.23
rpoB 760991 c.1185G>C synonymous_variant 0.23
rpoB 761006 c.1200C>G synonymous_variant 0.23
rpoB 761015 c.1209G>C synonymous_variant 0.24
rpoB 761021 c.1215G>C synonymous_variant 0.24
rpoB 761027 c.1221A>G synonymous_variant 0.25
rpoB 761036 c.1230G>C synonymous_variant 0.26
rpoB 761037 c.1231T>C synonymous_variant 0.26
rpoB 761057 c.1251G>C synonymous_variant 0.27
rpoB 761102 c.1296A>G synonymous_variant 0.32
rpoB 761123 c.1317G>C synonymous_variant 0.3
rpoB 761129 c.1323G>C synonymous_variant 0.28
rpoB 761132 c.1326G>T synonymous_variant 0.27
rpoB 761133 c.1327T>C synonymous_variant 0.28
rpoB 761150 c.1344A>C synonymous_variant 0.29
rpoB 761153 c.1347G>C synonymous_variant 0.28
rpoB 761165 c.1359G>C synonymous_variant 0.3
rpoB 761180 c.1374A>C synonymous_variant 0.29
rpoB 761189 c.1383T>C synonymous_variant 0.3
rpoB 761195 c.1389G>C synonymous_variant 0.29
rpoB 761207 c.1401C>T synonymous_variant 0.29
rpoB 761213 c.1407G>C synonymous_variant 0.3
rpoB 761219 c.1413G>C synonymous_variant 0.28
rpoB 761249 c.1443A>G synonymous_variant 0.25
rpoB 761255 c.1449T>G synonymous_variant 0.25
rpoB 761261 c.1455G>T synonymous_variant 0.25
rpoB 761306 c.1500C>G synonymous_variant 0.24
rpoB 761327 c.1521A>G synonymous_variant 0.22
rpoB 761330 c.1524G>C synonymous_variant 0.21
rpoB 761354 c.1548C>T synonymous_variant 0.2
rpoB 761360 c.1554T>C synonymous_variant 0.19
rpoB 761362 p.Ser519Thr missense_variant 0.19
rpoB 761373 p.Val523His missense_variant 0.16
rpoB 761579 c.1773G>C synonymous_variant 0.15
rpoB 761588 c.1782C>T synonymous_variant 0.16
rpoB 761606 c.1800C>G synonymous_variant 0.16
rpoB 761612 c.1806G>C synonymous_variant 0.16
rpoB 761615 c.1809A>C synonymous_variant 0.17
rpoB 761636 c.1830G>T synonymous_variant 0.18
rpoB 761645 c.1839C>G synonymous_variant 0.16
rpoB 761648 c.1842T>C synonymous_variant 0.16
rpoB 761657 c.1851C>G synonymous_variant 0.17
rpoB 761675 c.1869G>C synonymous_variant 0.17
rpoB 761735 c.1929C>G synonymous_variant 0.17
rpoB 761747 c.1941G>C synonymous_variant 0.17
rpoB 761750 c.1944G>C synonymous_variant 0.17
rpoB 761765 c.1959T>C synonymous_variant 0.18
rpoB 762008 c.2202C>T synonymous_variant 0.19
rpoB 762014 c.2208C>T synonymous_variant 0.18
rpoB 762017 c.2211A>G synonymous_variant 0.18
rpoB 762053 c.2247T>C synonymous_variant 0.18
rpoB 762062 c.2256T>C synonymous_variant 0.19
rpoB 762065 c.2259T>C synonymous_variant 0.19
rpoB 762083 c.2277T>C synonymous_variant 0.2
rpoB 762086 c.2280G>C synonymous_variant 0.19
rpoB 762101 c.2295C>G synonymous_variant 0.22
rpoB 762114 p.Ile770Val missense_variant 0.22
rpoB 762131 c.2325C>G synonymous_variant 0.22
rpoB 762140 c.2334G>C synonymous_variant 0.21
rpoB 762143 c.2337T>C synonymous_variant 0.21
rpoB 762149 c.2343G>C synonymous_variant 0.21
rpoB 762167 c.2361T>C synonymous_variant 0.19
rpoB 762176 c.2370T>C synonymous_variant 0.19
rpoB 762185 c.2379G>C synonymous_variant 0.19
rpoB 762206 c.2400C>G synonymous_variant 0.19
rpoB 762215 c.2409G>A synonymous_variant 0.82
rpoB 762233 c.2427G>C synonymous_variant 0.18
rpoB 762246 c.2440C>T synonymous_variant 0.16
rpoB 762254 c.2448T>G synonymous_variant 0.16
rpoB 762284 c.2478G>C synonymous_variant 0.16
rpoB 762293 c.2487T>C synonymous_variant 0.17
rpoB 762317 c.2511A>G synonymous_variant 0.18
rpoB 762329 c.2523G>C synonymous_variant 0.17
rpoB 762338 c.2532T>C synonymous_variant 0.17
rpoB 762347 c.2541T>C synonymous_variant 0.16
rpoB 762362 p.Glu852Asp missense_variant 0.16
rpoB 762369 c.2563T>C synonymous_variant 0.17
rpoC 762404 c.-966T>C upstream_gene_variant 0.16
rpoC 762410 c.-960T>C upstream_gene_variant 0.16
rpoC 762416 c.-954A>G upstream_gene_variant 0.16
rpoC 762419 c.-951C>G upstream_gene_variant 0.16
rpoC 762449 c.-921C>A upstream_gene_variant 0.16
rpoC 762467 c.-903C>T upstream_gene_variant 0.15
rpoC 762857 c.-513C>G upstream_gene_variant 0.16
rpoC 762860 c.-510G>C upstream_gene_variant 0.16
rpoC 762863 c.-507T>C upstream_gene_variant 0.16
rpoC 762929 c.-441G>C upstream_gene_variant 0.18
rpoC 762989 c.-381G>C upstream_gene_variant 0.2
rpoC 762995 c.-375G>T upstream_gene_variant 0.19
rpoC 763013 c.-357C>G upstream_gene_variant 0.2
rpoC 763028 c.-342T>C upstream_gene_variant 0.18
rpoC 763031 c.-339T>G upstream_gene_variant 0.18
rpoC 763034 c.-336C>G upstream_gene_variant 0.18
rpoC 763040 c.-330C>G upstream_gene_variant 0.18
rpoC 763070 c.-300T>C upstream_gene_variant 0.2
rpoC 763085 c.-285C>G upstream_gene_variant 0.2
rpoC 763486 c.117T>G synonymous_variant 0.17
rpoC 763528 c.159G>A synonymous_variant 0.21
rpoC 763546 c.177A>G synonymous_variant 0.2
rpoC 763570 c.201G>C synonymous_variant 0.21
rpoC 763573 c.204G>C synonymous_variant 0.22
rpoC 763594 c.225C>T synonymous_variant 0.24
rpoC 763603 c.234C>T synonymous_variant 0.24
rpoC 763633 c.264T>C synonymous_variant 0.23
rpoC 763636 c.267T>C synonymous_variant 0.23
rpoC 763660 c.291T>G synonymous_variant 0.24
rpoC 763675 c.306C>G synonymous_variant 0.23
rpoC 763696 c.327T>C synonymous_variant 0.23
rpoC 763702 c.333C>G synonymous_variant 0.23
rpoC 763717 c.348T>C synonymous_variant 0.22
rpoC 763723 c.354G>C synonymous_variant 0.21
rpoC 763732 c.363C>G synonymous_variant 0.2
rpoC 763741 c.372C>T synonymous_variant 0.18
rpoC 763744 c.375G>C synonymous_variant 0.18
rpoC 763765 c.396T>C synonymous_variant 0.17
rpoC 763774 c.405G>C synonymous_variant 0.18
rpoC 763807 c.438T>C synonymous_variant 0.17
rpoC 763816 c.447C>G synonymous_variant 0.16
rpoC 763835 p.Ala156Met missense_variant 0.16
rpoC 763853 p.Val162Ile missense_variant 0.18
rpoC 763858 c.489A>G synonymous_variant 0.16
rpoC 763872 p.Gly168Ala missense_variant 0.17
rpoC 763876 p.Glu169Asp missense_variant 0.16
rpoC 763879 c.510A>G synonymous_variant 0.16
rpoC 763900 c.531G>C synonymous_variant 0.16
rpoC 763936 c.567C>G synonymous_variant 0.16
rpoC 763939 c.570G>A synonymous_variant 0.16
rpoC 763942 c.573C>G synonymous_variant 0.16
rpoC 763945 c.576T>C synonymous_variant 0.16
rpoC 763948 c.579G>A synonymous_variant 0.16
rpoC 763949 c.580C>A synonymous_variant 0.16
rpoC 763954 c.585C>G synonymous_variant 0.16
rpoC 763963 c.594C>T synonymous_variant 0.16
rpoC 763987 c.618C>T synonymous_variant 0.18
rpoC 763991 p.Ile208Leu missense_variant 0.17
rpoC 763996 c.627T>C synonymous_variant 0.17
rpoC 764002 c.633C>G synonymous_variant 0.18
rpoC 764005 c.636G>C synonymous_variant 0.18
rpoC 764024 c.655T>C synonymous_variant 0.16
rpoC 764059 c.690G>T synonymous_variant 0.16
rpoC 764083 c.714A>G synonymous_variant 0.16
rpoC 764101 c.732C>G synonymous_variant 0.16
rpoC 764102 p.Val245Ile missense_variant 0.17
rpoC 764107 c.738C>T synonymous_variant 0.16
rpoC 764112 p.Tyr248Phe missense_variant 0.16
rpoC 764116 c.747C>T synonymous_variant 0.16
rpoC 764131 c.762T>C synonymous_variant 0.18
rpoC 764140 c.771C>T synonymous_variant 0.19
rpoC 764236 c.867G>A synonymous_variant 0.15
rpoC 764272 c.903G>C synonymous_variant 0.16
rpoC 764405 c.1036A>C synonymous_variant 0.16
rpoC 764431 c.1062G>C synonymous_variant 0.16
rpoC 764434 c.1065A>G synonymous_variant 0.17
rpoC 764446 c.1077T>C synonymous_variant 0.17
rpoC 764449 c.1080G>C synonymous_variant 0.17
rpoC 764452 c.1083T>C synonymous_variant 0.17
rpoC 764458 c.1089G>C synonymous_variant 0.17
rpoC 764461 c.1092A>G synonymous_variant 0.17
rpoC 764489 c.1120C>T synonymous_variant 0.21
rpoC 764497 c.1128A>G synonymous_variant 0.2
rpoC 764510 c.1141C>T synonymous_variant 0.22
rpoC 764521 c.1152T>C synonymous_variant 0.22
rpoC 764527 c.1158C>T synonymous_variant 0.22
rpoC 764536 c.1167G>C synonymous_variant 0.2
rpoC 764539 c.1170C>G synonymous_variant 0.21
rpoC 764554 c.1185C>T synonymous_variant 0.23
rpoC 764560 c.1191T>C synonymous_variant 0.22
rpoC 764566 c.1197C>G synonymous_variant 0.22
rpoC 764575 c.1206T>G synonymous_variant 0.22
rpoC 764581 c.1212T>C synonymous_variant 0.22
rpoC 764593 c.1224C>T synonymous_variant 0.22
rpoC 764611 c.1242G>T synonymous_variant 0.24
rpoC 764650 c.1281G>C synonymous_variant 0.22
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 0.22
rpoC 764752 c.1383G>C synonymous_variant 0.21
rpoC 764764 c.1395T>C synonymous_variant 0.24
rpoC 764809 c.1440C>T synonymous_variant 0.23
rpoC 764815 c.1446A>G synonymous_variant 0.24
rpoC 764827 c.1458G>C synonymous_variant 0.22
rpoC 764858 c.1489T>C synonymous_variant 0.19
rpoC 764872 c.1503A>G synonymous_variant 0.18
rpoC 764888 c.1519T>C synonymous_variant 0.18
rpoC 764911 c.1542A>G synonymous_variant 0.18
rpoC 764932 c.1563C>A synonymous_variant 0.16
rpoC 764935 c.1566T>C synonymous_variant 0.16
rpoC 764968 c.1599T>C synonymous_variant 0.15
rpoC 765150 p.Gly594Glu missense_variant 0.95
rpoC 765187 c.1818C>T synonymous_variant 0.99
rpoC 765478 c.2109T>C synonymous_variant 0.18
rpoC 765499 c.2130C>G synonymous_variant 0.19
rpoC 765529 c.2160C>T synonymous_variant 0.17
rpoC 765541 c.2172C>G synonymous_variant 0.19
rpoC 765553 c.2184C>T synonymous_variant 0.2
rpoC 765556 c.2187G>C synonymous_variant 0.2
rpoC 765559 c.2190G>C synonymous_variant 0.2
rpoC 765580 c.2211G>C synonymous_variant 0.21
rpoC 765613 p.His748Gln missense_variant 0.2
rpoC 765625 c.2256C>G synonymous_variant 0.21
rpoC 765631 p.Asp754Glu missense_variant 0.21
rpoC 765700 c.2331T>C synonymous_variant 0.2
rpoC 765734 c.2365T>C synonymous_variant 0.19
rpoC 765739 c.2370G>T synonymous_variant 0.19
rpoC 765751 c.2382C>G synonymous_variant 0.17
rpoC 765753 p.Asp795Ala missense_variant 0.17
rpoC 765772 c.2403C>G synonymous_variant 0.19
rpoC 765784 c.2415C>G synonymous_variant 0.19
rpoC 765787 c.2418C>T synonymous_variant 0.19
rpoC 765793 c.2424C>G synonymous_variant 0.18
rpoC 765796 c.2427C>T synonymous_variant 0.18
rpoC 765811 c.2442T>C synonymous_variant 0.16
rpoC 765814 c.2445A>G synonymous_variant 0.16
rpoC 765826 c.2457T>C synonymous_variant 0.16
rpoC 765835 c.2466C>T synonymous_variant 0.17
rpoC 765850 c.2481G>C synonymous_variant 0.16
rpoC 765967 c.2598C>T synonymous_variant 0.15
rpoC 766012 c.2643C>G synonymous_variant 0.86
rpoC 766462 c.3093G>C synonymous_variant 0.15
rpoC 766492 c.3123T>C synonymous_variant 0.15
rpoC 766528 c.3159T>C synonymous_variant 0.16
rpoC 766531 c.3162G>C synonymous_variant 0.17
rpoC 766540 p.Asp1057Glu missense_variant 0.17
rpoC 766582 c.3213C>G synonymous_variant 0.15
rpoC 766583 p.Gly1072Ser missense_variant 0.16
rpoC 766594 c.3225G>C synonymous_variant 0.15
rpoC 766597 c.3228C>G synonymous_variant 0.16
rpoC 766607 p.Ile1080Leu missense_variant 0.18
rpoC 766625 c.3256C>T synonymous_variant 0.17
rpoC 766630 c.3261G>C synonymous_variant 0.18
rpoC 766657 c.3288A>G synonymous_variant 0.17
rpoC 766672 c.3303T>C synonymous_variant 0.17
rpoC 766673 p.Gly1102Asn missense_variant 0.17
rpoC 766726 c.3357T>C synonymous_variant 0.16
rpoC 766738 c.3369G>C synonymous_variant 0.17
rpoC 766765 c.3396A>C synonymous_variant 0.19
rpoC 766774 c.3405T>C synonymous_variant 0.17
rpoC 766801 c.3432C>G synonymous_variant 0.19
rpoC 766804 c.3435A>G synonymous_variant 0.19
rpoC 766861 c.3492G>C synonymous_variant 0.21
rpoC 766864 c.3495G>C synonymous_variant 0.21
rpoC 766876 c.3507C>T synonymous_variant 0.23
rpoC 766882 c.3513C>T synonymous_variant 0.24
rpoC 766900 c.3531T>C synonymous_variant 0.24
rpoC 766933 c.3564A>G synonymous_variant 0.24
rpoC 766945 c.3576A>G synonymous_variant 0.26
rpoC 766963 c.3594T>C synonymous_variant 0.26
rpoC 766972 c.3603G>C synonymous_variant 0.27
rpoC 766996 c.3627C>T synonymous_variant 0.26
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.24
rpoC 767014 c.3645G>C synonymous_variant 0.24
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.23
rpoC 767059 c.3690T>G synonymous_variant 0.2
rpoC 767062 c.3693C>A synonymous_variant 0.2
rpoC 767098 c.3729T>C synonymous_variant 0.17
rpoC 767111 c.3742C>T synonymous_variant 0.16
rpoC 767134 c.3765C>A synonymous_variant 0.15
mmpL5 775639 p.Ile948Val missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781421 c.-139C>A upstream_gene_variant 1.0
rpsL 781649 c.90T>C synonymous_variant 0.17
rpsL 781655 c.96T>C synonymous_variant 0.18
rpsL 781700 c.141G>C synonymous_variant 0.19
rpsL 781703 c.144G>T synonymous_variant 0.18
rpsL 781715 c.156T>C synonymous_variant 0.18
rpsL 781728 c.169T>C synonymous_variant 0.18
rpsL 781736 c.177T>C synonymous_variant 0.19
rpsL 781742 c.183C>T synonymous_variant 0.2
rpsL 781748 c.189C>G synonymous_variant 0.2
rpsL 781754 c.195G>C synonymous_variant 0.21
rpsL 781760 c.201T>C synonymous_variant 0.22
rpsL 781772 c.213C>A synonymous_variant 0.23
rpsL 781808 c.249C>T synonymous_variant 0.19
rpsL 781811 c.252C>T synonymous_variant 0.19
rpsL 781832 c.273T>C synonymous_variant 0.17
rpsL 781838 c.279G>C synonymous_variant 0.17
rpsL 781841 c.282C>G synonymous_variant 0.17
rpsL 781865 c.306G>C synonymous_variant 0.17
rpsL 781868 c.309T>C synonymous_variant 0.17
rpsL 781871 c.312G>C synonymous_variant 0.17
rpsL 781877 c.318T>C synonymous_variant 0.17
rpsL 781892 c.333A>G synonymous_variant 0.19
rpsL 781898 c.339A>T synonymous_variant 0.18
rpsL 781916 c.357T>C synonymous_variant 0.18
rpsL 781929 p.Gly124Ser missense_variant 0.19
fbiC 1303980 c.1050G>A synonymous_variant 0.15
fbiC 1305494 c.2565_*55delGGCCTAGCCCCGGCGACGATGCCGGGTCGCGGGATGCGGCCCGTTGAGGAGCGGGGCAATCT frameshift_variant&stop_lost&splice_region_variant 0.28
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.16
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.17
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.16
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.16
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.15
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.16
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.17
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.17
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.17
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.19
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.19
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.19
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.15
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 0.15
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.17
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.18
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.17
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.17
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.14
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.15
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.15
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.15
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.15
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.15
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.14
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.15
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.2
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.21
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.23
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.22
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.21
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.22
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.21
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.19
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.18
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.17
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.17
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.18
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.18
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.17
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.18
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.18
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.19
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.21
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.21
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.2
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.2
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.21
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.24
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.22
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.22
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.23
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.22
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.2
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.2
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.17
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.14
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.16
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.16
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.16
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.15
inhA 1674660 c.459G>C synonymous_variant 0.16
inhA 1674672 c.471C>G synonymous_variant 0.19
inhA 1674708 c.507G>A synonymous_variant 0.17
inhA 1674741 c.540C>T synonymous_variant 0.14
rpsA 1833661 c.120A>G synonymous_variant 0.18
rpsA 1833667 c.126C>G synonymous_variant 0.18
rpsA 1833721 c.180A>G synonymous_variant 0.18
rpsA 1833724 c.183C>G synonymous_variant 0.18
rpsA 1833727 c.186G>C synonymous_variant 0.18
rpsA 1833742 c.201A>G synonymous_variant 0.18
rpsA 1833745 c.204G>C synonymous_variant 0.18
rpsA 1833748 c.207C>G synonymous_variant 0.18
rpsA 1833787 c.246C>G synonymous_variant 0.16
rpsA 1833790 c.249T>C synonymous_variant 0.16
rpsA 1833811 c.270G>T synonymous_variant 0.17
rpsA 1833841 c.300C>G synonymous_variant 0.16
rpsA 1833847 c.306C>G synonymous_variant 0.17
rpsA 1833856 c.315A>G synonymous_variant 0.18
rpsA 1833874 c.333T>C synonymous_variant 0.17
rpsA 1833928 c.387G>C synonymous_variant 0.17
rpsA 1833940 c.399C>G synonymous_variant 0.17
rpsA 1833971 c.430C>T synonymous_variant 0.17
rpsA 1833979 c.438T>C synonymous_variant 0.17
rpsA 1834021 c.480C>T synonymous_variant 0.15
rpsA 1834333 c.792C>T synonymous_variant 0.18
rpsA 1834348 c.807T>C synonymous_variant 0.19
rpsA 1834366 c.825A>G synonymous_variant 0.2
rpsA 1834396 c.855G>C synonymous_variant 0.22
rpsA 1834411 c.870T>C synonymous_variant 0.24
rpsA 1834417 c.876G>C synonymous_variant 0.22
rpsA 1834423 c.882G>C synonymous_variant 0.23
rpsA 1834435 c.894G>C synonymous_variant 0.23
rpsA 1834451 c.910T>C synonymous_variant 0.2
rpsA 1834465 c.924T>C synonymous_variant 0.2
rpsA 1834468 c.927A>G synonymous_variant 0.21
rpsA 1834489 c.948T>C synonymous_variant 0.24
rpsA 1834513 c.972C>G synonymous_variant 0.24
rpsA 1834528 c.987T>C synonymous_variant 0.22
rpsA 1834540 c.999G>C synonymous_variant 0.22
rpsA 1834546 c.1005T>C synonymous_variant 0.21
rpsA 1834555 c.1014T>G synonymous_variant 0.22
rpsA 1834606 c.1065C>G synonymous_variant 0.21
rpsA 1834609 c.1068T>C synonymous_variant 0.21
rpsA 1834633 c.1092A>G synonymous_variant 0.2
rpsA 1834639 c.1098T>C synonymous_variant 0.2
rpsA 1834654 p.Glu371Asp missense_variant 0.17
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2156007 c.105C>T synonymous_variant 1.0
PPE35 2168448 p.Gln722Arg missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2518579 c.465T>C synonymous_variant 0.16
kasA 2518588 c.474T>C synonymous_variant 0.17
kasA 2518591 c.477G>C synonymous_variant 0.17
kasA 2518609 p.Met165Ile missense_variant 0.19
kasA 2518624 c.510C>G synonymous_variant 0.19
kasA 2518639 c.525G>C synonymous_variant 0.19
kasA 2518657 c.543G>C synonymous_variant 0.22
kasA 2518672 c.558G>C synonymous_variant 0.23
kasA 2518678 c.564C>T synonymous_variant 0.23
kasA 2518684 c.570C>G synonymous_variant 0.22
kasA 2518693 c.579C>G synonymous_variant 0.2
kasA 2518696 c.582C>G synonymous_variant 0.2
kasA 2518702 c.588C>T synonymous_variant 0.19
kasA 2518705 c.591T>C synonymous_variant 0.18
kasA 2518711 c.597A>G synonymous_variant 0.17
kasA 2518714 c.600A>C synonymous_variant 0.18
kasA 2518732 c.618C>G synonymous_variant 0.16
kasA 2518744 c.630C>T synonymous_variant 0.15
kasA 2518768 c.654C>T synonymous_variant 0.16
kasA 2518777 c.663C>T synonymous_variant 0.15
kasA 2518792 c.678C>A synonymous_variant 0.14
kasA 2518819 c.705C>T synonymous_variant 0.16
kasA 2518825 c.711T>C synonymous_variant 0.16
kasA 2518969 c.855T>G synonymous_variant 0.16
kasA 2518975 c.861C>G synonymous_variant 0.16
kasA 2518979 c.865A>C synonymous_variant 0.16
kasA 2518999 c.885G>A synonymous_variant 0.14
kasA 2519021 p.Ala303Thr missense_variant 0.14
folC 2747569 c.30C>T synonymous_variant 0.99
thyX 3067325 c.621A>G synonymous_variant 0.16
thyX 3067349 c.597G>C synonymous_variant 0.17
thyX 3067355 c.591A>C synonymous_variant 0.17
thyX 3067367 c.579G>C synonymous_variant 0.18
thyX 3067373 c.573C>G synonymous_variant 0.18
thyX 3067391 c.555G>C synonymous_variant 0.18
thyX 3067394 c.552G>C synonymous_variant 0.19
thyX 3067439 c.507A>G synonymous_variant 0.23
thyX 3067445 c.501C>G synonymous_variant 0.22
thyX 3067457 c.489C>G synonymous_variant 0.22
thyX 3067465 p.Ile161Val missense_variant 0.23
thyX 3067475 c.471A>G synonymous_variant 0.21
thyX 3067490 c.456C>G synonymous_variant 0.21
thyX 3067493 c.453A>G synonymous_variant 0.21
thyX 3067515 p.Ser144Thr missense_variant 0.23
thyX 3067530 p.Ala139Ser missense_variant 0.23
thyX 3067545 p.Glu134Ala missense_variant 0.23
thyX 3067549 p.Thr133Ala missense_variant 0.21
thyX 3067556 p.His130Gln missense_variant 0.18
thyX 3067559 c.387C>G synonymous_variant 0.17
thyX 3067565 p.Asp127Glu missense_variant 0.17
thyX 3067570 p.Ala126Pro missense_variant 0.17
thyX 3067577 c.369G>A synonymous_variant 0.16
thyX 3067601 p.Arg115His missense_variant 0.18
thyX 3067611 p.Lys112Thr missense_variant 0.19
thyX 3067619 c.327A>C synonymous_variant 0.19
thyX 3067631 c.315C>G synonymous_variant 0.18
thyX 3067634 c.312C>G synonymous_variant 0.18
thyX 3067652 c.294T>C synonymous_variant 0.19
thyX 3067661 c.285C>G synonymous_variant 0.2
thyX 3067685 c.261A>C synonymous_variant 0.19
thyX 3067691 p.Ile85Leu missense_variant 0.18
thyX 3067694 c.252G>C synonymous_variant 0.19
thyX 3067736 c.210C>T synonymous_variant 0.15
ald 3086788 c.-32T>C upstream_gene_variant 0.99
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
rpoA 3877556 p.Ser318Ala missense_variant 0.88
rpoA 3877587 c.921A>G synonymous_variant 0.17
rpoA 3877613 p.Ile299Val missense_variant 0.2
rpoA 3877617 c.891G>C synonymous_variant 0.2
rpoA 3877656 c.852T>G synonymous_variant 0.19
rpoA 3877668 c.840A>G synonymous_variant 0.19
rpoA 3877679 p.Ala277Ser missense_variant 0.2
rpoA 3877686 c.822A>G synonymous_variant 0.21
rpoA 3877692 c.816G>C synonymous_variant 0.2
rpoA 3877704 c.804G>C synonymous_variant 0.19
rpoA 3877737 c.771G>C synonymous_variant 0.2
rpoA 3877743 c.765T>C synonymous_variant 0.2
rpoA 3877764 c.744C>G synonymous_variant 0.18
rpoA 3877770 c.738A>G synonymous_variant 0.17
rpoA 3877776 c.732T>C synonymous_variant 0.17
rpoA 3877782 c.726T>C synonymous_variant 0.18
rpoA 3877791 c.717C>G synonymous_variant 0.18
rpoA 3877818 c.690A>G synonymous_variant 0.17
rpoA 3877839 c.669G>C synonymous_variant 0.17
rpoA 3877848 c.660C>T synonymous_variant 0.17
rpoA 3877857 c.651G>A synonymous_variant 0.17
rpoA 3877866 c.642G>C synonymous_variant 0.17
rpoA 3877875 c.633T>G synonymous_variant 0.19
rpoA 3877878 c.630G>C synonymous_variant 0.17
rpoA 3877890 c.618C>T synonymous_variant 0.17
rpoA 3877896 c.612G>C synonymous_variant 0.16
rpoA 3877900 p.Ser203Asn missense_variant 0.16
rpoA 3877920 c.588G>C synonymous_variant 0.17
rpoA 3877923 c.585C>T synonymous_variant 0.16
rpoA 3877926 c.582G>C synonymous_variant 0.17
rpoA 3877962 c.546G>T synonymous_variant 0.19
rpoA 3877986 c.522G>C synonymous_variant 0.15
rpoA 3878001 c.507A>G synonymous_variant 0.18
rpoA 3878022 c.486T>C synonymous_variant 0.2
rpoA 3878028 c.480G>C synonymous_variant 0.2
rpoA 3878031 c.477T>C synonymous_variant 0.2
rpoA 3878040 c.468T>C synonymous_variant 0.21
rpoA 3878055 c.453A>G synonymous_variant 0.2
rpoA 3878058 c.450G>T synonymous_variant 0.21
rpoA 3878061 c.447G>C synonymous_variant 0.2
rpoA 3878067 c.441C>G synonymous_variant 0.2
rpoA 3878070 c.438T>C synonymous_variant 0.2
rpoA 3878076 c.432C>T synonymous_variant 0.22
rpoA 3878094 c.414C>G synonymous_variant 0.2
rpoA 3878103 c.405A>G synonymous_variant 0.21
rpoA 3878106 c.402G>C synonymous_variant 0.21
rpoA 3878118 c.390T>C synonymous_variant 0.19
rpoA 3878130 c.378C>G synonymous_variant 0.21
rpoA 3878141 p.Met123Leu missense_variant 0.22
rpoA 3878143 p.Gly122Asp missense_variant 0.22
rpoA 3878157 c.351C>G synonymous_variant 0.21
rpoA 3878163 c.345C>T synonymous_variant 0.21
rpoA 3878169 c.339G>C synonymous_variant 0.21
rpoA 3878172 c.336G>C synonymous_variant 0.22
rpoA 3878187 c.321C>G synonymous_variant 0.21
rpoA 3878193 c.315T>C synonymous_variant 0.22
rpoA 3878199 c.309T>C synonymous_variant 0.23
rpoA 3878217 c.291A>G synonymous_variant 0.24
rpoA 3878226 c.282C>G synonymous_variant 0.23
rpoA 3878232 c.276G>C synonymous_variant 0.22
rpoA 3878247 c.261G>C synonymous_variant 0.23
rpoA 3878250 c.258C>G synonymous_variant 0.23
rpoA 3878271 c.237T>C synonymous_variant 0.25
rpoA 3878284 p.Glu75Ala missense_variant 0.24
rpoA 3878292 c.216T>C synonymous_variant 0.25
rpoA 3878298 c.210A>G synonymous_variant 0.25
rpoA 3878304 c.204G>C synonymous_variant 0.25
rpoA 3878310 c.198G>C synonymous_variant 0.26
rpoA 3878313 c.195G>C synonymous_variant 0.26
rpoA 3878322 c.186A>G synonymous_variant 0.26
rpoA 3878331 c.177A>G synonymous_variant 0.23
rpoA 3878334 c.174T>C synonymous_variant 0.22
rpoA 3878337 c.171T>C synonymous_variant 0.23
rpoA 3878346 c.162T>C synonymous_variant 0.25
rpoA 3878364 c.144A>C synonymous_variant 0.24
rpoA 3878367 c.141C>G synonymous_variant 0.23
rpoA 3878376 c.132G>C synonymous_variant 0.24
rpoA 3878385 c.123C>G synonymous_variant 0.2
rpoA 3878388 c.120C>G synonymous_variant 0.2
rpoA 3878391 c.117T>C synonymous_variant 0.2
rpoA 3878415 c.93C>T synonymous_variant 0.22
rpoA 3878424 c.84G>C synonymous_variant 0.2
rpoA 3878436 c.72A>G synonymous_variant 0.19
rpoA 3878442 c.66G>C synonymous_variant 0.2
rpoA 3878454 c.54A>C synonymous_variant 0.22
rpoA 3878472 p.Asp12Glu missense_variant 0.21
rpoA 3878478 c.30C>G synonymous_variant 0.21
rpoA 3878484 c.24C>A synonymous_variant 0.23
rpoA 3878490 c.18C>A synonymous_variant 0.23
rpoA 3878496 c.12A>T synonymous_variant 0.25
clpC1 4038392 c.2313C>T synonymous_variant 0.15
clpC1 4038398 c.2307G>T synonymous_variant 0.14
clpC1 4038419 c.2286T>C synonymous_variant 0.16
clpC1 4038433 c.2272C>T synonymous_variant 0.15
clpC1 4038434 c.2271G>A synonymous_variant 0.15
clpC1 4038445 p.Ala754Thr missense_variant 0.14
clpC1 4038460 p.Leu749Met missense_variant 0.14
clpC1 4038530 p.Glu725Asp missense_variant 0.17
clpC1 4038596 c.2109A>G synonymous_variant 0.18
clpC1 4038623 c.2082A>G synonymous_variant 0.17
clpC1 4038640 p.Asp689Asn missense_variant 0.17
clpC1 4038653 c.2052C>T synonymous_variant 0.16
clpC1 4038661 p.Ser682Thr missense_variant 0.15
clpC1 4038671 c.2034T>C synonymous_variant 0.16
clpC1 4038683 c.2022T>C synonymous_variant 0.16
clpC1 4038695 c.2010C>G synonymous_variant 0.16
clpC1 4038701 c.2004G>C synonymous_variant 0.17
clpC1 4038704 c.2001T>C synonymous_variant 0.17
clpC1 4038707 c.1998C>G synonymous_variant 0.17
clpC1 4038713 c.1992T>C synonymous_variant 0.17
clpC1 4038749 c.1956C>G synonymous_variant 0.18
clpC1 4038755 c.1950G>T synonymous_variant 0.18
clpC1 4038770 c.1935C>T synonymous_variant 0.17
clpC1 4038773 c.1932T>C synonymous_variant 0.17
clpC1 4038782 c.1923G>C synonymous_variant 0.19
clpC1 4038812 c.1893T>C synonymous_variant 0.19
clpC1 4038821 c.1884G>A synonymous_variant 0.19
clpC1 4038845 c.1860G>C synonymous_variant 0.21
clpC1 4038860 c.1845G>C synonymous_variant 0.17
clpC1 4038878 c.1827A>G synonymous_variant 0.17
clpC1 4038908 c.1797C>G synonymous_variant 0.17
clpC1 4038914 c.1791G>C synonymous_variant 0.17
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.17
clpC1 4038953 c.1752A>G synonymous_variant 0.2
clpC1 4038956 c.1749T>C synonymous_variant 0.2
clpC1 4038965 c.1740T>C synonymous_variant 0.2
clpC1 4038971 c.1734T>C synonymous_variant 0.18
clpC1 4038974 c.1731T>C synonymous_variant 0.18
clpC1 4038989 c.1716T>C synonymous_variant 0.18
clpC1 4038997 c.1708T>C synonymous_variant 0.19
clpC1 4039004 c.1701C>G synonymous_variant 0.19
clpC1 4039022 c.1683A>G synonymous_variant 0.21
clpC1 4039064 c.1641C>T synonymous_variant 0.18
clpC1 4039142 c.1563A>G synonymous_variant 0.16
clpC1 4039145 c.1560G>C synonymous_variant 0.16
clpC1 4039169 p.Glu512Asp missense_variant 0.17
clpC1 4039172 c.1533A>G synonymous_variant 0.17
clpC1 4039178 c.1527G>C synonymous_variant 0.17
clpC1 4039183 c.1522T>C synonymous_variant 0.17
clpC1 4039186 c.1519C>T synonymous_variant 0.17
clpC1 4039226 c.1479T>C synonymous_variant 0.18
clpC1 4039274 c.1431G>C synonymous_variant 0.17
clpC1 4039286 c.1419T>C synonymous_variant 0.18
clpC1 4039295 c.1410A>C synonymous_variant 0.17
clpC1 4039319 c.1386T>C synonymous_variant 0.19
clpC1 4039322 c.1383T>C synonymous_variant 0.17
clpC1 4039328 c.1377A>C synonymous_variant 0.17
clpC1 4039331 c.1374C>G synonymous_variant 0.17
clpC1 4039337 p.Thr456Gln missense_variant 0.18
clpC1 4039349 c.1356C>T synonymous_variant 0.2
clpC1 4039352 c.1353C>G synonymous_variant 0.2
clpC1 4039364 c.1341C>G synonymous_variant 0.2
clpC1 4039391 c.1314T>G synonymous_variant 0.19
clpC1 4039409 c.1296T>C synonymous_variant 0.18
clpC1 4039412 c.1293T>G synonymous_variant 0.19
clpC1 4039415 p.Glu430Asp missense_variant 0.19
clpC1 4039430 c.1275T>C synonymous_variant 0.18
clpC1 4039442 c.1263A>G synonymous_variant 0.18
clpC1 4039454 c.1251A>G synonymous_variant 0.2
clpC1 4039463 c.1242C>G synonymous_variant 0.19
clpC1 4039466 c.1239T>C synonymous_variant 0.2
clpC1 4039469 c.1236T>C synonymous_variant 0.21
clpC1 4039480 c.1225C>A synonymous_variant 0.19
clpC1 4039481 c.1224T>G synonymous_variant 0.19
clpC1 4039484 c.1221T>C synonymous_variant 0.19
clpC1 4039517 c.1188C>G synonymous_variant 0.18
clpC1 4039556 c.1149G>C synonymous_variant 0.17
clpC1 4039559 c.1146C>G synonymous_variant 0.17
clpC1 4039562 c.1143C>G synonymous_variant 0.17
clpC1 4039565 c.1140G>C synonymous_variant 0.17
clpC1 4039570 p.Met379Leu missense_variant 0.17
clpC1 4039576 p.Ala377Pro missense_variant 0.17
clpC1 4039577 c.1128T>C synonymous_variant 0.17
clpC1 4039589 c.1116G>C synonymous_variant 0.17
clpC1 4039610 c.1095G>C synonymous_variant 0.17
clpC1 4039616 c.1089G>C synonymous_variant 0.18
clpC1 4039622 c.1083C>T synonymous_variant 0.18
clpC1 4039661 c.1044T>G synonymous_variant 0.21
clpC1 4039664 c.1041G>C synonymous_variant 0.2
clpC1 4039694 c.1011G>C synonymous_variant 0.2
clpC1 4039724 c.981A>G synonymous_variant 0.19
clpC1 4039751 c.954A>G synonymous_variant 0.17
clpC1 4039757 c.948A>G synonymous_variant 0.17
clpC1 4039760 c.945T>C synonymous_variant 0.17
clpC1 4039766 c.939T>C synonymous_variant 0.17
clpC1 4039769 c.936C>G synonymous_variant 0.17
clpC1 4039775 c.930G>C synonymous_variant 0.17
clpC1 4039778 c.927A>G synonymous_variant 0.17
clpC1 4039781 c.924G>C synonymous_variant 0.18
clpC1 4039790 c.915C>G synonymous_variant 0.19
clpC1 4039805 c.900C>T synonymous_variant 0.18
clpC1 4039817 c.888A>C synonymous_variant 0.18
clpC1 4039820 c.885T>G synonymous_variant 0.17
clpC1 4039826 c.879C>G synonymous_variant 0.2
clpC1 4039831 c.874T>C synonymous_variant 0.21
clpC1 4039850 c.855T>C synonymous_variant 0.2
clpC1 4039865 c.840T>C synonymous_variant 0.2
clpC1 4039898 c.807C>G synonymous_variant 0.17
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.16
clpC1 4039937 c.768G>C synonymous_variant 0.17
clpC1 4039951 c.754C>T synonymous_variant 0.17
clpC1 4039952 c.753T>C synonymous_variant 0.17
clpC1 4039979 c.726C>G synonymous_variant 0.16
clpC1 4039991 c.714G>C synonymous_variant 0.16
clpC1 4040147 c.558A>G synonymous_variant 0.2
clpC1 4040162 c.543G>C synonymous_variant 0.21
clpC1 4040165 c.540G>C synonymous_variant 0.21
clpC1 4040171 c.534C>G synonymous_variant 0.22
clpC1 4040201 c.504C>G synonymous_variant 0.2
clpC1 4040204 c.501G>C synonymous_variant 0.19
clpC1 4040207 c.498T>G synonymous_variant 0.2
clpC1 4040210 c.495G>C synonymous_variant 0.2
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 0.21
clpC1 4040225 c.480A>C synonymous_variant 0.2
clpC1 4040228 c.477G>T synonymous_variant 0.2
clpC1 4040231 c.474C>T synonymous_variant 0.2
clpC1 4040237 c.468C>T synonymous_variant 0.22
clpC1 4040246 c.459C>G synonymous_variant 0.22
clpC1 4040249 c.456A>G synonymous_variant 0.22
clpC1 4040267 c.438A>G synonymous_variant 0.23
clpC1 4040273 c.432T>C synonymous_variant 0.23
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.22
clpC1 4040279 c.426C>G synonymous_variant 0.22
clpC1 4040291 c.414G>C synonymous_variant 0.23
clpC1 4040318 c.387C>G synonymous_variant 0.19
clpC1 4040330 c.375C>G synonymous_variant 0.19
clpC1 4040342 c.363C>G synonymous_variant 0.17
embC 4241089 c.1227C>G synonymous_variant 0.16
embC 4241095 c.1233C>T synonymous_variant 0.16
embC 4241479 c.1617C>G synonymous_variant 0.17
embC 4241480 c.1618T>C synonymous_variant 0.17
embC 4241496 p.Ala545Gly missense_variant 0.17
embC 4241500 c.1638A>C synonymous_variant 0.16
embC 4241501 p.Ser547Thr missense_variant 0.16
embC 4241506 c.1644G>C synonymous_variant 0.17
embC 4241518 c.1656A>G synonymous_variant 0.18
embC 4241521 c.1659T>C synonymous_variant 0.19
embC 4241530 c.1668C>A synonymous_variant 0.18
embC 4241536 c.1674A>G synonymous_variant 0.17
embC 4241539 c.1677T>C synonymous_variant 0.17
embC 4241545 c.1683T>C synonymous_variant 0.17
embC 4241548 c.1686T>C synonymous_variant 0.17
embC 4241551 c.1689A>G synonymous_variant 0.17
embC 4241567 p.Ile569Val missense_variant 0.19
embC 4241572 c.1710C>G synonymous_variant 0.2
embC 4241578 c.1716G>C synonymous_variant 0.2
embC 4241584 c.1722T>C synonymous_variant 0.19
embC 4241587 c.1725C>G synonymous_variant 0.19
embC 4241591 p.Leu577Val missense_variant 0.18
embC 4241611 c.1749G>C synonymous_variant 0.18
embC 4241614 c.1752A>C synonymous_variant 0.17
embA 4242643 c.-590C>T upstream_gene_variant 0.99
embC 4242803 p.Val981Leu missense_variant 0.94
embB 4247446 c.933C>T synonymous_variant 0.14
embB 4247464 c.951C>G synonymous_variant 0.16
embB 4247470 c.957T>C synonymous_variant 0.17
embB 4247491 c.978G>C synonymous_variant 0.18
embB 4247497 c.984T>C synonymous_variant 0.18
embB 4247512 c.999T>C synonymous_variant 0.18
embB 4247539 c.1026T>C synonymous_variant 0.23
embB 4247554 c.1041T>C synonymous_variant 0.21
embB 4247566 c.1053C>A synonymous_variant 0.2
embB 4247572 c.1059A>G synonymous_variant 0.2
embB 4247579 p.Ala356Phe missense_variant 0.18
embB 4247587 c.1074G>A synonymous_variant 0.17
embB 4247603 c.1090C>T synonymous_variant 0.17
embB 4247611 c.1098G>T synonymous_variant 0.17
embB 4247614 c.1101T>C synonymous_variant 0.17
embB 4247629 c.1116C>G synonymous_variant 0.17
embB 4247632 c.1119C>G synonymous_variant 0.17
embB 4247638 c.1125G>C synonymous_variant 0.18
embB 4247646 p.Glu378Ala missense_variant 0.18
embB 4247656 c.1143A>G synonymous_variant 0.17
embB 4247662 c.1149C>G synonymous_variant 0.16
embB 4247683 c.1170C>G synonymous_variant 0.18
embB 4247716 c.1203C>T synonymous_variant 0.16
embB 4247722 c.1209G>T synonymous_variant 0.15
embB 4247746 c.1233C>T synonymous_variant 0.16
embB 4247761 c.1248T>C synonymous_variant 0.15
embB 4247866 c.1353G>C synonymous_variant 0.16
embB 4247876 c.1363C>T synonymous_variant 0.16
embB 4247887 c.1374C>T synonymous_variant 0.15
embB 4247893 c.1380C>T synonymous_variant 0.17
embB 4247899 p.Met462Ile missense_variant 0.16
embB 4247905 c.1392G>C synonymous_variant 0.17
embB 4247909 c.1396T>C synonymous_variant 0.18
embB 4247914 c.1401G>C synonymous_variant 0.19
embB 4247926 c.1413C>T synonymous_variant 0.2
embB 4247932 c.1419C>G synonymous_variant 0.2
embB 4247940 p.Leu476Trp missense_variant 0.21
embB 4247945 c.1432T>C synonymous_variant 0.2
embB 4247951 p.Ser480Ala missense_variant 0.2
embB 4247956 c.1443G>C synonymous_variant 0.19
embB 4247974 c.1461C>G synonymous_variant 0.19
embB 4248007 c.1494C>G synonymous_variant 0.18
embB 4248011 p.Ser500Arg missense_variant 0.19
embB 4248014 p.Thr501Ala missense_variant 0.19
embB 4248035 p.Val508Ile missense_variant 0.17
embB 4248040 c.1527C>G synonymous_variant 0.16
embB 4248041 p.Ala510Thr missense_variant 0.16
embB 4248044 p.Lys511Ala missense_variant 0.16
embB 4248070 c.1557T>C synonymous_variant 0.19
embB 4248085 c.1572T>C synonymous_variant 0.19
embB 4248097 c.1584C>G synonymous_variant 0.19
embB 4248130 c.1617G>C synonymous_variant 0.17
embB 4248133 c.1620C>G synonymous_variant 0.17
embB 4248139 c.1626C>G synonymous_variant 0.17
embB 4248142 c.1629T>C synonymous_variant 0.16
embB 4248157 c.1644A>G synonymous_variant 0.17
embB 4248199 c.1686A>G synonymous_variant 0.16
embB 4248200 p.Ile563Val missense_variant 0.16
embB 4248205 c.1692C>G synonymous_variant 0.16
embB 4248206 p.Ser565Gly missense_variant 0.17
embB 4248220 c.1707A>C synonymous_variant 0.16
embB 4248304 c.1791G>C synonymous_variant 0.17
embB 4248319 c.1806A>G synonymous_variant 0.16
embB 4249532 p.Ala1007Thr missense_variant 0.17
embB 4249537 c.3024A>G synonymous_variant 0.17
embB 4249543 c.3030G>C synonymous_variant 0.17
embB 4249546 c.3033G>A synonymous_variant 0.17
embB 4249558 c.3045A>C synonymous_variant 0.17
embB 4249568 p.Ser1019Thr missense_variant 0.18
embB 4249573 c.3060T>C synonymous_variant 0.18
embB 4249579 c.3066G>A synonymous_variant 0.18
embB 4249580 p.Leu1023Met missense_variant 0.18
embB 4249606 c.3093C>A synonymous_variant 0.16
embB 4249615 c.3102C>G synonymous_variant 0.17
embB 4249627 c.3114G>C synonymous_variant 0.16
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
fbiC 1305494 c.2565_*56delCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN frameshift_variant&stop_lost&splice_region_variant 1.0