Rv0668 - c.2370G>T


Drug resistance types
8 Sensitive 13 RR-TB 53 HR-TB 22 MDR-TB 6 Pre-XDR-TB 3 XDR-TB 207 Other
lineage Counts
lineage Count
54
lineage4.3 2
La1.8 1
lineage5.3;lineage5.1.4 3
lineage6.2.3 1
lineage4.5 1
lineage4.9 62
lineage4.1.1.3 6
lineage3 4
lineage2.1;lineage6.3 2
La3;lineage2.1;lineage4.9 3
lineage2.2.1 22
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1;lineage4.9 14
lineage4.8 6
lineage2.2.1;lineage3 1
La3;lineage4.9 6
lineage4.2.2.2 1
lineage6.3.1 3
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2.1 14
lineage4.6.2.2 3
lineage4.7 2
lineage4.3.2 1
lineage4.1.3 2
lineage4.1 1
La3;lineage4.8 2
La3;lineage2 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1.1 3
M.canetti;lineage2.2 2
lineage4.9;lineage6.3 5
lineage4.3.4.2.1 2
lineage4.1.1.1 4
La3;lineage2.1;lineage4.9;lineage6.3 4
La3 6
lineage4.9;La1.2.BCG 1
lineage1.1.1 1
lineage2.2 8
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 2
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage2.1 5
lineage3.1.1 1
lineage2.2.1.2;lineage7 1
lineage4.3.4.1 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.9;lineage7 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage6.1.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
La1;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
lineage4 3
La1.2.BCG;La1.8.1 1
lineage4.1;lineage4.8 2
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage4.4.1.1 1
lineage3.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage1.1.3.2 2
lineage4.3.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1.2 1
lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 312
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816999 Other None
SRR1196768 MDR-TB None
79baca4a-a69a-4980-b9ee-12a7742d919b Other None
6c1db1bb-e2cd-4c4e-95a7-37622c28821f Other None
e4bc9dc6-3537-4da0-8a87-01a7ce11b362 Other lineage4.3 None
61cb4b39-70f6-48fa-bef3-fda12d085707 Other None
a0355179-10ce-4bfb-8cdd-bb24690490d9 Other None
28ef168a-0ba1-4073-b822-163e8b00a440 HR-TB La1.8 None
0e83c857-7bed-40b1-b200-86a8dcef8eed Other lineage5.3;lineage5.1.4 None
ca61bade-cc49-4f9f-b28c-66d8a4fcb265 HR-TB None
5ea96644-d035-4ca4-8369-a767b1f5d9c7 HR-TB None
bc0c7498-7804-42b5-8d3f-01eaf4eafafb HR-TB None
be314fe3-6afd-497d-8937-212d8473c637 Other None
5a444780-b54d-4e3e-8a68-1bdf680f1e28 Other None
86251b58-9c36-4408-a023-6f8b9b0e79fc Other None
ERR9787061 Sensitive lineage6.2.3 None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6789621 Other lineage4.9 None
ERR3804162 Sensitive lineage6.3.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
ERR9786507 RR-TB lineage4.7 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR9787223 Sensitive lineage6.3.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR21690574 Other lineage4.1.2.1 None
ERR11049020 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786440 Other lineage4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR20969677 HR-TB La3;lineage2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
ERR9786445 Other lineage4.8 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR1175074 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR2514692 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
SRR28119777 Other lineage4.9 None
62710dec-9126-404a-b1a2-d257cb793828 HR-TB None
9ee578d7-f578-416a-96bf-335cd73eca7a HR-TB La3 None
d3107dbe-d309-4436-a64a-b0fb58bd8bb6 HR-TB None
5c545d0e-4100-46ce-bbe5-cb2fd647e27b Other None
987c250a-5b0f-4596-b8b2-9dac287656a1 Other None
6057cdcd-4368-47ed-b882-bf8d1dbceab0 Other lineage4.9;La1.2.BCG None
c3a50fb9-4309-411d-b92d-0c956d76d723 Other lineage5.3;lineage5.1.4 None
6a10e208-a122-4cd9-b048-b159230db286 Other None
df0f79c2-92eb-4f05-a796-1fd95fc13a0a Other La3 None
4ee407d4-e109-4e4b-be80-bda90482856a Other La3 None
56d9dc1b-8bfc-4c4f-a6f3-a7122c9eb8de Other None
765eb4ee-592b-47ed-9320-29043d8694dc Other lineage4.3 None
d82542a4-d71c-40c9-ad70-1cb3b522f644 Other lineage1.1.1 None
17b5135f-7c08-40ed-aae7-413c478a36eb Other None
94403634-a546-4c9c-bbc5-34ce71df029b Other lineage2.2 None
8ee962f9-7051-4a2f-9330-631a4d144fca Other None
a30f3af2-b0cf-4f6e-9c05-848428fb6b95 Other None
033fc7a4-cedc-4f53-bf83-85e03cc293f4 Other None
ERR1035157 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR1169306 Other La3;lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR6785227 Other lineage2.2.1 None
SRR1173384 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1172951 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
ERR4819781 Other lineage2.2.1 None
SRR6785527 Sensitive lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4818347 Other lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR4769450 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1183144 RR-TB lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR4815604 Other None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
ERR11252736 Other lineage4.9 None
68e4f2ce-e6ec-4697-947f-b12e97b7ba49 Other None
f03ce76d-aec1-4e51-a1c3-d825c8f77a65 Other lineage5.3;lineage5.1.4 None
003321d9-7fa6-4250-84bf-99c2e1f7ca3b Other None
70c04da5-2c60-440c-aa5e-672043796574 HR-TB None
eb8da2c7-160f-4368-983f-b78baacae5c8 HR-TB None
06e40c38-60f8-4999-902e-189f3189d9bd Other None
81ff8df5-dde2-46d8-84a1-f1ecb3aa3638 HR-TB None
1564d8bc-c7e2-4deb-8647-4dc3fb915de7 Other lineage2.2 None
581d92f0-120c-4b65-bbb1-9ca19a488e93 Other lineage2.2 None
7e499d3e-e73e-4d6f-9a2b-a952c0be0821 HR-TB None
32cfb0ef-e520-46e3-8899-846b8dc6e08a HR-TB None
ebf4cd98-4bdc-43bf-a552-28f296a18688 Other La3 None
57f8d438-5766-47c0-b69f-7eaae89dd9fb Other None
30b8217e-5718-440f-8fe2-22db59dd1182 Other None
185b3a4c-2446-4baa-a045-836980dccca5 Other None
6cfd23b4-2266-42e7-a020-42eb65b73bfb Other None
4b9ad7db-a750-462a-8bf5-ec5928801204 HR-TB None
ERR4769497 Other La1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR4819932 Other lineage4.7 None
ERR3283055 HR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
ERR9896144 Other lineage3 None
ERR702406 Other lineage2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
ERR3283044 Other lineage4 None
ERR990545 RR-TB lineage3 None
SRR6045548 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1173153 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR1165699 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4814352 Other lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR7821126 Other lineage1.1.3.2 None
SRR14782405 HR-TB lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR1180172 RR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
SRR6045053 Other lineage4 None
ERR9786671 Other None
SRR28351341 Other lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None