Run ID: ERR11081258
Sample name:
Date: 08-04-2023 13:36:34
Number of reads: 1389884
Percentage reads mapped: 92.15
Strain: lineage4.8
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 0.99 |
lineage4.8 | Euro-American (mainly T) | T1;T2;T3;T5 | RD219 | 0.98 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 0.35 | streptomycin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
rpoB | 760121 | c.315T>C | synonymous_variant | 0.16 |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.16 |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.18 |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.18 |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.19 |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.21 |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.23 |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.27 |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.29 |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.31 |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.29 |
rpoB | 760307 | c.501T>C | synonymous_variant | 0.28 |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.28 |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.25 |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.24 |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.26 |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.24 |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.23 |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.21 |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.23 |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.22 |
rpoB | 760412 | c.606C>G | synonymous_variant | 0.22 |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.19 |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.17 |
rpoB | 760934 | c.1128C>T | synonymous_variant | 0.13 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.14 |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.18 |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.19 |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.18 |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.2 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.2 |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.21 |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.22 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.21 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.22 |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.21 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.27 |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.23 |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.23 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.23 |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.25 |
rpoB | 761153 | c.1347G>C | synonymous_variant | 0.25 |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.25 |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.22 |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.24 |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.21 |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.22 |
rpoB | 761213 | c.1407G>C | synonymous_variant | 0.19 |
rpoB | 761219 | c.1413G>C | synonymous_variant | 0.19 |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.18 |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.16 |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.16 |
rpoB | 761306 | c.1500C>G | synonymous_variant | 0.16 |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.15 |
rpoB | 761330 | c.1524G>C | synonymous_variant | 0.15 |
rpoB | 761354 | c.1548C>T | synonymous_variant | 0.15 |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.15 |
rpoB | 761362 | p.Ser519Thr | missense_variant | 0.15 |
rpoB | 761373 | p.Val523His | missense_variant | 0.15 |
rpoB | 761408 | c.1602G>C | synonymous_variant | 0.17 |
rpoB | 761414 | c.1608A>G | synonymous_variant | 0.17 |
rpoB | 761423 | c.1617T>C | synonymous_variant | 0.16 |
rpoB | 761439 | p.Asp545Asn | missense_variant | 0.14 |
rpoB | 761444 | c.1638T>C | synonymous_variant | 0.14 |
rpoB | 761447 | c.1641C>G | synonymous_variant | 0.14 |
rpoB | 761452 | p.Val549Asp | missense_variant | 0.14 |
rpoB | 761457 | p.Pro551Ser | missense_variant | 0.14 |
rpoB | 761477 | c.1671C>G | synonymous_variant | 0.17 |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.18 |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.17 |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.16 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.17 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.17 |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.19 |
rpoB | 761588 | c.1782C>T | synonymous_variant | 0.18 |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.18 |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.17 |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.17 |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.17 |
rpoB | 761639 | c.1833G>A | synonymous_variant | 0.17 |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.17 |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.17 |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.2 |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.2 |
rpoB | 761720 | c.1914C>G | synonymous_variant | 0.19 |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.21 |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.22 |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.24 |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.24 |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.26 |
rpoB | 761772 | p.His656Ala | missense_variant | 0.25 |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.27 |
rpoB | 761791 | p.Arg662His | missense_variant | 0.23 |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.22 |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.23 |
rpoB | 761834 | c.2028T>C | synonymous_variant | 0.27 |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.26 |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.26 |
rpoB | 761858 | c.2052G>C | synonymous_variant | 0.27 |
rpoB | 761873 | c.2067A>C | synonymous_variant | 0.26 |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.24 |
rpoB | 761906 | c.2100C>G | synonymous_variant | 0.22 |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.2 |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.2 |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.2 |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.2 |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.23 |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.26 |
rpoB | 762008 | c.2202C>T | synonymous_variant | 0.29 |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.29 |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.29 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.25 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.25 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.25 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.26 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.26 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.28 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.29 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.28 |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.24 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.25 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.24 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.26 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.24 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.21 |
rpoB | 762206 | c.2400C>G | synonymous_variant | 0.21 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.21 |
rpoB | 762246 | c.2440C>T | synonymous_variant | 0.2 |
rpoB | 762254 | c.2448T>G | synonymous_variant | 0.2 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.2 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.19 |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.22 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.23 |
rpoB | 762314 | c.2508C>T | synonymous_variant | 0.25 |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.26 |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.23 |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.23 |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.24 |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.24 |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.25 |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.27 |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.26 |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 0.27 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.27 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.26 |
rpoC | 762419 | c.-951C>G | upstream_gene_variant | 0.27 |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.26 |
rpoC | 762449 | c.-921C>A | upstream_gene_variant | 0.28 |
rpoC | 762467 | c.-903C>T | upstream_gene_variant | 0.23 |
rpoC | 762488 | c.-882G>C | upstream_gene_variant | 0.19 |
rpoB | 762489 | p.Val895Gln | missense_variant | 0.16 |
rpoC | 762509 | c.-861T>G | upstream_gene_variant | 0.17 |
rpoB | 762510 | p.Ala902Pro | missense_variant | 0.17 |
rpoC | 762521 | c.-849C>T | upstream_gene_variant | 0.15 |
rpoC | 762857 | c.-513C>G | upstream_gene_variant | 0.15 |
rpoC | 762860 | c.-510G>C | upstream_gene_variant | 0.17 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.17 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.24 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.31 |
rpoC | 763013 | c.-357C>G | upstream_gene_variant | 0.29 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.28 |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 0.28 |
rpoC | 763034 | c.-336C>G | upstream_gene_variant | 0.28 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.3 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.35 |
rpoC | 763085 | c.-285C>G | upstream_gene_variant | 0.36 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.32 |
rpoC | 763136 | c.-234C>T | upstream_gene_variant | 0.32 |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.33 |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 0.27 |
rpoC | 763166 | c.-204A>G | upstream_gene_variant | 0.28 |
rpoC | 763190 | c.-180C>T | upstream_gene_variant | 0.27 |
rpoC | 763202 | c.-168A>G | upstream_gene_variant | 0.25 |
rpoC | 763205 | c.-165G>C | upstream_gene_variant | 0.18 |
rpoC | 763206 | c.-164_-162delAGTinsTCG | upstream_gene_variant | 0.18 |
rpoC | 763214 | c.-156T>C | upstream_gene_variant | 0.2 |
rpoC | 763226 | c.-144A>G | upstream_gene_variant | 0.2 |
rpoC | 763227 | c.-143C>T | upstream_gene_variant | 0.2 |
rpoC | 763238 | c.-132T>C | upstream_gene_variant | 0.19 |
rpoC | 763253 | c.-117G>C | upstream_gene_variant | 0.16 |
rpoC | 763256 | c.-114G>A | upstream_gene_variant | 0.16 |
rpoC | 763268 | c.-102C>G | upstream_gene_variant | 0.17 |
rpoC | 763402 | c.33C>G | synonymous_variant | 0.17 |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.18 |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.19 |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.27 |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.27 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.3 |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.35 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.4 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.41 |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.4 |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.41 |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.41 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.37 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.38 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.38 |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.37 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.31 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.28 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.28 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.27 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.27 |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.24 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.24 |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.22 |
rpoC | 763774 | c.405G>C | synonymous_variant | 0.22 |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.18 |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.18 |
rpoC | 763835 | p.Ala156Met | missense_variant | 0.17 |
rpoC | 763853 | p.Val162Ile | missense_variant | 0.16 |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.15 |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.15 |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.15 |
rpoC | 763877 | c.508_510delCTAinsTTG | synonymous_variant | 0.15 |
rpoC | 763888 | c.519G>C | synonymous_variant | 0.15 |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.15 |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.15 |
rpoC | 763900 | c.531G>C | synonymous_variant | 0.17 |
rpoC | 763936 | c.567C>G | synonymous_variant | 0.24 |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.24 |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.23 |
rpoC | 763960 | c.591T>C | synonymous_variant | 0.25 |
rpoC | 763991 | p.Ile208Leu | missense_variant | 0.23 |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.23 |
rpoC | 764002 | c.633C>G | synonymous_variant | 0.24 |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.23 |
rpoC | 764024 | c.655_657delTTGinsCTC | synonymous_variant | 0.24 |
rpoC | 764032 | p.Asp221Glu | missense_variant | 0.22 |
rpoC | 764040 | p.Ser224Thr | missense_variant | 0.23 |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.25 |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.25 |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.21 |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.16 |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.16 |
rpoC | 764102 | p.Val245Ile | missense_variant | 0.16 |
rpoC | 764112 | p.Tyr248Phe | missense_variant | 0.18 |
rpoC | 764116 | c.747C>T | synonymous_variant | 0.18 |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.22 |
rpoC | 764140 | c.771C>T | synonymous_variant | 0.23 |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.21 |
rpoC | 764195 | p.Ser276Ile | missense_variant | 0.2 |
rpoC | 764203 | c.834G>C | synonymous_variant | 0.2 |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.2 |
rpoC | 764215 | c.846A>G | synonymous_variant | 0.21 |
rpoC | 764236 | c.867G>A | synonymous_variant | 0.23 |
rpoC | 764248 | c.879C>G | synonymous_variant | 0.25 |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.21 |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.22 |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.22 |
rpoC | 764272 | c.903G>C | synonymous_variant | 0.22 |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.21 |
rpoC | 764353 | c.984G>C | synonymous_variant | 0.17 |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.18 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.17 |
rpoC | 764381 | c.1012_1013delTCinsAG | synonymous_variant | 0.17 |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.18 |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.19 |
rpoC | 764419 | c.1050C>G | synonymous_variant | 0.22 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.23 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.23 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.23 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.22 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.21 |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.22 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.22 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.22 |
rpoC | 764489 | c.1120C>T | synonymous_variant | 0.31 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.31 |
rpoC | 764510 | c.1141C>T | synonymous_variant | 0.34 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.37 |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.36 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.38 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.38 |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.38 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.37 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.39 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.39 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.37 |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.37 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.34 |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.31 |
rpoC | 764651 | c.1282_1284delTCGinsAGC | synonymous_variant | 0.31 |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.23 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.26 |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.24 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.26 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.26 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.24 |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.26 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.25 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.24 |
rpoC | 764932 | c.1563C>A | synonymous_variant | 0.23 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.23 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.24 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.26 |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.23 |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.21 |
rpoC | 765034 | c.1665T>C | synonymous_variant | 0.21 |
rpoC | 765040 | c.1671T>C | synonymous_variant | 0.17 |
rpoC | 765041 | c.1672T>C | synonymous_variant | 0.17 |
rpoC | 765047 | c.1678T>C | synonymous_variant | 0.17 |
rpoC | 765053 | c.1684_1685delTCinsAG | synonymous_variant | 0.16 |
rpoC | 765346 | c.1977C>G | synonymous_variant | 0.17 |
rpoC | 765349 | c.1980T>C | synonymous_variant | 0.16 |
rpoC | 765352 | c.1983G>C | synonymous_variant | 0.18 |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.2 |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.21 |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.18 |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.16 |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.23 |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.23 |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.25 |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.25 |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.27 |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.27 |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.27 |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.29 |
rpoC | 765613 | p.His748Gln | missense_variant | 0.28 |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.31 |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.31 |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.31 |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.32 |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.32 |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.33 |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.33 |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.34 |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.3 |
rpoC | 765787 | c.2418C>T | synonymous_variant | 0.3 |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.3 |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.29 |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.27 |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.24 |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.23 |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.25 |
rpoC | 765850 | c.2481G>C | synonymous_variant | 0.28 |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.23 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.22 |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.22 |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.23 |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.21 |
rpoC | 765982 | c.2613C>G | synonymous_variant | 0.21 |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.2 |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.18 |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.19 |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.19 |
rpoC | 766030 | c.2661C>G | synonymous_variant | 0.2 |
rpoC | 766036 | c.2667C>T | synonymous_variant | 0.2 |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.19 |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.19 |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.18 |
rpoC | 766085 | p.Pro906Ala | missense_variant | 0.81 |
rpoC | 766096 | c.2727G>C | synonymous_variant | 0.19 |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.15 |
rpoC | 766142 | c.2773C>T | synonymous_variant | 0.14 |
rpoC | 766168 | c.2799C>T | synonymous_variant | 0.14 |
rpoC | 766240 | c.2871T>C | synonymous_variant | 0.15 |
rpoC | 766243 | c.2874C>G | synonymous_variant | 0.15 |
rpoC | 766258 | c.2889T>C | synonymous_variant | 0.16 |
rpoC | 766273 | c.2904T>C | synonymous_variant | 0.2 |
rpoC | 766274 | p.Ala969Thr | missense_variant | 0.23 |
rpoC | 766280 | p.Ser971Gly | missense_variant | 0.23 |
rpoC | 766288 | c.2919C>G | synonymous_variant | 0.25 |
rpoC | 766303 | c.2934C>T | synonymous_variant | 0.23 |
rpoC | 766312 | c.2943T>G | synonymous_variant | 0.23 |
rpoC | 766327 | c.2958C>A | synonymous_variant | 0.21 |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.21 |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.22 |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.23 |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.23 |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.23 |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.24 |
rpoC | 766408 | c.3039C>G | synonymous_variant | 0.22 |
rpoC | 766411 | c.3042C>G | synonymous_variant | 0.22 |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.25 |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.26 |
rpoC | 766462 | c.3093G>C | synonymous_variant | 0.25 |
rpoC | 766483 | c.3114G>C | synonymous_variant | 0.24 |
rpoC | 766484 | p.Val1039Ile | missense_variant | 0.24 |
rpoC | 766492 | c.3123T>C | synonymous_variant | 0.28 |
rpoC | 766522 | c.3153C>G | synonymous_variant | 0.28 |
rpoC | 766528 | c.3159T>C | synonymous_variant | 0.26 |
rpoC | 766531 | c.3162G>C | synonymous_variant | 0.25 |
rpoC | 766540 | p.Asp1057Glu | missense_variant | 0.27 |
rpoC | 766549 | c.3180G>C | synonymous_variant | 0.28 |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.2 |
rpoC | 766582 | c.3213C>G | synonymous_variant | 0.19 |
rpoC | 766583 | p.Gly1072Ser | missense_variant | 0.19 |
rpoC | 766591 | c.3222A>G | synonymous_variant | 0.19 |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.22 |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.21 |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.22 |
rpoC | 766630 | c.3261G>C | synonymous_variant | 0.25 |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.26 |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.2 |
rpoC | 766673 | p.Gly1102Asn | missense_variant | 0.2 |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.2 |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.21 |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.21 |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.19 |
rpoC | 766801 | c.3432C>G | synonymous_variant | 0.16 |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.16 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.14 |
rpsL | 781700 | c.141G>C | synonymous_variant | 0.18 |
rpsL | 781703 | c.144G>T | synonymous_variant | 0.19 |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.18 |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.2 |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.21 |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.36 |
rpsL | 781748 | c.189C>G | synonymous_variant | 0.36 |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.36 |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.36 |
rpsL | 781772 | c.213C>A | synonymous_variant | 0.36 |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.34 |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.34 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.32 |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.33 |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.31 |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.29 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.28 |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.28 |
rpsL | 781877 | c.318T>C | synonymous_variant | 0.28 |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.28 |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.28 |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.28 |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.3 |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.16 |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.15 |
rplC | 800627 | c.-182C>T | upstream_gene_variant | 0.15 |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 0.18 |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.18 |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.19 |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.18 |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.18 |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.18 |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.18 |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.17 |
atpE | 1460992 | c.-53A>C | upstream_gene_variant | 1.0 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 0.14 |
rrs | 1471969 | n.124T>C | non_coding_transcript_exon_variant | 0.17 |
rrs | 1471970 | n.125G>A | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472028 | n.183A>T | non_coding_transcript_exon_variant | 0.24 |
rrs | 1472029 | n.184C>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472030 | n.185G>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472031 | n.186G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472033 | n.188A>G | non_coding_transcript_exon_variant | 0.24 |
rrs | 1472034 | n.189T>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472044 | n.199G>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472045 | n.200T>A | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.34 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.34 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1473756 | n.99G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1473832 | n.175C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473945 | n.288T>A | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473946 | n.289A>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473986 | n.329T>C | non_coding_transcript_exon_variant | 0.32 |
rrl | 1473987 | n.330G>A | non_coding_transcript_exon_variant | 0.32 |
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474012 | n.355C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474093 | n.436G>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474376 | n.719T>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474409 | n.756_766delACCCACACGCG | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474427 | n.770A>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474429 | n.772G>C | non_coding_transcript_exon_variant | 0.23 |
rrl | 1474435 | n.780_783delGAAT | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.32 |
rrl | 1474823 | n.1166C>T | non_coding_transcript_exon_variant | 0.34 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474904 | n.1247G>A | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474956 | n.1299C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474960 | n.1303C>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474963 | n.1306G>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474964 | n.1307T>A | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474965 | n.1308G>C | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474970 | n.1313G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475006 | n.1349A>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475088 | n.1431A>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475267 | n.1610G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1475313 | n.1656G>A | non_coding_transcript_exon_variant | 0.26 |
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 0.24 |
rrl | 1475765 | n.2111delG | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.19 |
rrl | 1476031 | n.2374C>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476033 | n.2376T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476034 | n.2377C>A | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476048 | n.2391G>A | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.13 |
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.26 |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.26 |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.31 |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.3 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.29 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.29 |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.29 |
rpsA | 1833748 | c.207C>G | synonymous_variant | 0.3 |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.35 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.35 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.36 |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.34 |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.27 |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.3 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.3 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.32 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.24 |
rpsA | 1833886 | c.345C>G | synonymous_variant | 0.23 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.22 |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.2 |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.19 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.21 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.2 |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.18 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.17 |
rpsA | 1834081 | c.540C>T | synonymous_variant | 0.19 |
rpsA | 1834096 | c.555G>C | synonymous_variant | 0.18 |
rpsA | 1834099 | c.558C>G | synonymous_variant | 0.18 |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.19 |
rpsA | 1834105 | c.564C>G | synonymous_variant | 0.19 |
rpsA | 1834108 | c.567C>G | synonymous_variant | 0.2 |
rpsA | 1834123 | c.582C>G | synonymous_variant | 0.19 |
rpsA | 1834150 | c.609G>C | synonymous_variant | 0.2 |
rpsA | 1834153 | c.612T>C | synonymous_variant | 0.19 |
rpsA | 1834154 | p.Asn205Gln | missense_variant | 0.19 |
rpsA | 1834157 | c.616T>C | synonymous_variant | 0.19 |
rpsA | 1834162 | c.621A>G | synonymous_variant | 0.19 |
rpsA | 1834165 | c.624A>G | synonymous_variant | 0.2 |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.2 |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.22 |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.28 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.28 |
rpsA | 1834210 | c.669C>T | synonymous_variant | 0.25 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.25 |
rpsA | 1834231 | c.690T>C | synonymous_variant | 0.24 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.24 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.26 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.23 |
rpsA | 1834262 | c.721_723delTCGinsAGC | synonymous_variant | 0.23 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.25 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.25 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.28 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.28 |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.28 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.28 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.25 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.25 |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.18 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.17 |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.18 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.16 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.14 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 0.15 |
kasA | 2517989 | c.-126T>C | upstream_gene_variant | 0.15 |
kasA | 2517993 | c.-122G>T | upstream_gene_variant | 0.16 |
kasA | 2518031 | c.-84G>T | upstream_gene_variant | 0.14 |
kasA | 2518540 | c.426T>C | synonymous_variant | 0.14 |
kasA | 2518567 | c.453G>C | synonymous_variant | 0.14 |
kasA | 2518574 | p.Ile154Val | missense_variant | 0.14 |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.15 |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.16 |
kasA | 2518591 | c.477G>C | synonymous_variant | 0.16 |
kasA | 2518609 | p.Met165Ile | missense_variant | 0.18 |
kasA | 2518624 | c.510C>G | synonymous_variant | 0.17 |
kasA | 2518639 | c.525G>C | synonymous_variant | 0.22 |
kasA | 2518657 | c.543G>C | synonymous_variant | 0.24 |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.25 |
kasA | 2518678 | c.564C>T | synonymous_variant | 0.25 |
kasA | 2518684 | c.570C>G | synonymous_variant | 0.25 |
kasA | 2518693 | c.579C>G | synonymous_variant | 0.22 |
kasA | 2518696 | c.582C>G | synonymous_variant | 0.22 |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.24 |
kasA | 2518705 | c.591T>C | synonymous_variant | 0.23 |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.22 |
kasA | 2518714 | c.600A>C | synonymous_variant | 0.23 |
kasA | 2518732 | c.618C>G | synonymous_variant | 0.23 |
kasA | 2518744 | c.630C>T | synonymous_variant | 0.25 |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.25 |
kasA | 2518768 | c.654C>T | synonymous_variant | 0.22 |
kasA | 2518777 | c.663C>T | synonymous_variant | 0.19 |
kasA | 2518783 | c.669T>C | synonymous_variant | 0.21 |
kasA | 2518789 | c.675G>C | synonymous_variant | 0.2 |
kasA | 2518792 | c.678C>A | synonymous_variant | 0.23 |
kasA | 2518795 | c.681C>G | synonymous_variant | 0.23 |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.24 |
kasA | 2518864 | c.750G>C | synonymous_variant | 0.23 |
kasA | 2518879 | c.765A>G | synonymous_variant | 0.24 |
kasA | 2518885 | c.771T>C | synonymous_variant | 0.2 |
kasA | 2518898 | c.784T>C | synonymous_variant | 0.2 |
kasA | 2518906 | c.792A>G | synonymous_variant | 0.19 |
kasA | 2518910 | p.Leu266Met | missense_variant | 0.19 |
kasA | 2518921 | c.807T>C | synonymous_variant | 0.17 |
kasA | 2518936 | c.822C>G | synonymous_variant | 0.17 |
kasA | 2518939 | c.825T>C | synonymous_variant | 0.17 |
kasA | 2518942 | c.828T>C | synonymous_variant | 0.18 |
kasA | 2518951 | c.837G>C | synonymous_variant | 0.2 |
kasA | 2518954 | c.840C>G | synonymous_variant | 0.2 |
kasA | 2518963 | c.849T>C | synonymous_variant | 0.2 |
kasA | 2518969 | c.855T>G | synonymous_variant | 0.18 |
kasA | 2518975 | c.861C>G | synonymous_variant | 0.18 |
kasA | 2518979 | c.865A>C | synonymous_variant | 0.18 |
kasA | 2518990 | c.876T>G | synonymous_variant | 0.16 |
kasA | 2518993 | c.879C>G | synonymous_variant | 0.16 |
kasA | 2518999 | c.885G>C | synonymous_variant | 0.16 |
kasA | 2519008 | c.894C>G | synonymous_variant | 0.16 |
kasA | 2519017 | c.903G>C | synonymous_variant | 0.15 |
kasA | 2519020 | c.906G>C | synonymous_variant | 0.15 |
kasA | 2519021 | p.Ala303Lys | missense_variant | 0.15 |
kasA | 2519027 | p.Ile305Val | missense_variant | 0.15 |
kasA | 2519050 | c.936C>G | synonymous_variant | 0.17 |
kasA | 2519053 | c.939G>C | synonymous_variant | 0.17 |
kasA | 2519056 | c.942G>C | synonymous_variant | 0.17 |
kasA | 2519062 | c.948T>G | synonymous_variant | 0.17 |
kasA | 2519068 | c.954C>T | synonymous_variant | 0.18 |
kasA | 2519072 | p.Ala320Thr | missense_variant | 0.2 |
kasA | 2519095 | c.981C>A | synonymous_variant | 0.2 |
kasA | 2519107 | c.993T>C | synonymous_variant | 0.16 |
kasA | 2519108 | p.Asp332Gln | missense_variant | 0.16 |
kasA | 2519116 | c.1002C>G | synonymous_variant | 0.18 |
kasA | 2519122 | c.1008G>C | synonymous_variant | 0.2 |
kasA | 2519137 | c.1023T>G | synonymous_variant | 0.2 |
kasA | 2519158 | c.1044C>T | synonymous_variant | 0.18 |
kasA | 2519167 | c.1053T>G | synonymous_variant | 0.21 |
kasA | 2519173 | c.1059C>G | synonymous_variant | 0.19 |
Rv2752c | 3064673 | p.Ala507Ser | missense_variant | 0.98 |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.17 |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.2 |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.18 |
thyA | 3074010 | c.462C>G | synonymous_variant | 0.18 |
thyA | 3074028 | c.444G>C | synonymous_variant | 0.19 |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.16 |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.17 |
thyA | 3074127 | c.345G>C | synonymous_variant | 0.14 |
alr | 3840764 | c.657G>C | synonymous_variant | 1.0 |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.16 |
clpC1 | 4038433 | c.2272C>T | synonymous_variant | 0.15 |
clpC1 | 4038434 | c.2271G>A | synonymous_variant | 0.15 |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.16 |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.16 |
clpC1 | 4038456 | p.Val750Glu | missense_variant | 0.16 |
clpC1 | 4038460 | p.Leu749Met | missense_variant | 0.17 |
clpC1 | 4038486 | p.Gly740Asn | missense_variant | 0.16 |
clpC1 | 4038489 | p.Ala739Gly | missense_variant | 0.16 |
clpC1 | 4038494 | c.2211G>C | synonymous_variant | 0.16 |
clpC1 | 4038497 | p.Ser736Gln | missense_variant | 0.15 |
clpC1 | 4038509 | c.2196C>T | synonymous_variant | 0.16 |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.15 |
clpC1 | 4038755 | c.1950G>T | synonymous_variant | 0.16 |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 0.16 |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.16 |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.17 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.17 |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.15 |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.16 |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.15 |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.16 |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 0.17 |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.19 |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.18 |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.19 |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.19 |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.18 |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.19 |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.2 |
clpC1 | 4039004 | c.1701C>G | synonymous_variant | 0.2 |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.23 |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.24 |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 0.26 |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 0.25 |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.24 |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 0.24 |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.27 |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.22 |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.22 |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 0.2 |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.2 |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.2 |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.19 |
clpC1 | 4039186 | c.1519C>T | synonymous_variant | 0.19 |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 0.16 |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.15 |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 0.16 |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.16 |
clpC1 | 4040381 | c.324T>C | synonymous_variant | 0.15 |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 0.15 |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 0.15 |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 0.17 |
clpC1 | 4040423 | c.282A>G | synonymous_variant | 0.18 |
clpC1 | 4040426 | c.279T>C | synonymous_variant | 0.18 |
clpC1 | 4040431 | c.274T>C | synonymous_variant | 0.19 |
clpC1 | 4040444 | c.261C>T | synonymous_variant | 0.2 |
clpC1 | 4040450 | c.255A>G | synonymous_variant | 0.19 |
clpC1 | 4040459 | c.246C>G | synonymous_variant | 0.19 |
clpC1 | 4040465 | c.240T>C | synonymous_variant | 0.19 |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 0.19 |
clpC1 | 4040477 | c.228G>C | synonymous_variant | 0.19 |
clpC1 | 4040480 | c.225T>G | synonymous_variant | 0.17 |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 0.15 |
embC | 4240699 | c.837C>G | synonymous_variant | 0.15 |
embC | 4240726 | c.864G>C | synonymous_variant | 0.16 |
embC | 4240780 | c.918T>C | synonymous_variant | 0.18 |
embC | 4240783 | c.921G>C | synonymous_variant | 0.18 |
embC | 4240789 | c.927T>C | synonymous_variant | 0.17 |
embC | 4240819 | c.957A>G | synonymous_variant | 0.19 |
embC | 4240828 | c.966G>A | synonymous_variant | 0.22 |
embC | 4240831 | c.969T>G | synonymous_variant | 0.22 |
embC | 4240867 | c.1005T>C | synonymous_variant | 0.19 |
embC | 4240870 | c.1008T>C | synonymous_variant | 0.19 |
embC | 4240873 | c.1011C>G | synonymous_variant | 0.19 |
embC | 4240879 | c.1017G>C | synonymous_variant | 0.19 |
embC | 4240880 | p.Ala340Thr | missense_variant | 0.18 |
embC | 4240885 | c.1023T>C | synonymous_variant | 0.17 |
embC | 4240897 | c.1035C>G | synonymous_variant | 0.16 |
embC | 4240898 | c.1036_1038delCTAinsTTG | synonymous_variant | 0.16 |
embC | 4240903 | c.1041C>G | synonymous_variant | 0.16 |
embC | 4240911 | p.Ala350Val | missense_variant | 0.16 |
embC | 4240921 | c.1059C>G | synonymous_variant | 0.15 |
embC | 4240924 | c.1062C>G | synonymous_variant | 0.15 |
embC | 4240996 | c.1134G>C | synonymous_variant | 0.18 |
embC | 4241002 | c.1140G>C | synonymous_variant | 0.17 |
embC | 4241013 | p.Met384Thr | missense_variant | 0.18 |
embC | 4241017 | c.1155T>C | synonymous_variant | 0.17 |
embC | 4241023 | c.1161T>G | synonymous_variant | 0.19 |
embC | 4241032 | c.1170G>C | synonymous_variant | 0.19 |
embC | 4241038 | c.1176G>C | synonymous_variant | 0.18 |
embC | 4241047 | c.1185C>G | synonymous_variant | 0.18 |
embC | 4241050 | c.1188T>G | synonymous_variant | 0.18 |
embC | 4241053 | c.1191G>C | synonymous_variant | 0.18 |
embC | 4241140 | c.1278A>G | synonymous_variant | 0.15 |
embC | 4241158 | c.1296T>C | synonymous_variant | 0.15 |
embC | 4241161 | c.1299C>G | synonymous_variant | 0.14 |
embC | 4241170 | c.1308G>C | synonymous_variant | 0.17 |
embC | 4241173 | c.1311C>T | synonymous_variant | 0.16 |
embC | 4241206 | c.1344G>C | synonymous_variant | 0.15 |
embC | 4241218 | c.1356G>C | synonymous_variant | 0.15 |
embC | 4241530 | c.1668C>A | synonymous_variant | 0.13 |
embC | 4241551 | c.1689A>G | synonymous_variant | 0.14 |
embC | 4241614 | c.1752A>C | synonymous_variant | 0.14 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 0.98 |
ubiA | 4269164 | p.Leu224Met | missense_variant | 0.14 |
aftB | 4269179 | c.-343C>A | upstream_gene_variant | 0.16 |
aftB | 4269183 | c.-347T>C | upstream_gene_variant | 0.15 |
aftB | 4269186 | c.-350C>G | upstream_gene_variant | 0.15 |
aftB | 4269201 | c.-365A>G | upstream_gene_variant | 0.16 |
ubiA | 4269220 | p.Ala205Lys | missense_variant | 0.15 |
aftB | 4269222 | c.-386T>C | upstream_gene_variant | 0.15 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
Rv3083 | 3448507 | c.5_*1408del | frameshift_variant&stop_lost&splice_region_variant | 1.0 |