ERR4814352
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675221
|
HR-TB
|
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR4814639
|
HR-TB
|
lineage4
|
None
|
SRR3675229
|
Other
|
lineage4
|
None
|
ERR4815471
|
Other
|
lineage4.9
|
None
|
ERR4814683
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
ERR1750907
|
RR-TB
|
|
None
|
SRR3675236
|
HR-TB
|
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675249
|
Sensitive
|
lineage4.9
|
None
|
SRR3675266
|
Sensitive
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR3675279
|
Other
|
|
None
|
SRR3675312
|
HR-TB
|
lineage4
|
None
|
SRR3675311
|
Other
|
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675387
|
Sensitive
|
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
ERR4816964
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Other
|
|
None
|
SRR3675455
|
Sensitive
|
lineage4
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR3675522
|
Other
|
|
None
|
SRR3675542
|
Other
|
lineage4.9
|
None
|
ERR4817037
|
Other
|
lineage4.9
|
None
|
SRR3675547
|
Other
|
lineage4.9
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR3675577
|
Sensitive
|
lineage4.9
|
None
|
SRR3675572
|
Other
|
|
None
|
ERR212034
|
HR-TB
|
|
None
|
ERR4817060
|
RR-TB
|
|
None
|
ERR4817204
|
RR-TB
|
lineage4.9
|
None
|
ERR4816550
|
Sensitive
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3742665
|
HR-TB
|
|
None
|
SRR3675574
|
HR-TB
|
|
None
|
SRR3675571
|
HR-TB
|
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR4816656
|
HR-TB
|
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR4817893
|
Other
|
lineage4.8;La3
|
None
|
ERR4816762
|
Other
|
lineage4;lineage2
|
None
|
ERR4815815
|
Sensitive
|
lineage4
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7496472
|
Other
|
|
None
|
ERR4818021
|
Other
|
La1.8.1
|
None
|
ERR2446566
|
Other
|
lineage4.1
|
None
|
ERR234659
|
HR-TB
|
|
None
|
ERR4819280
|
Sensitive
|
lineage4
|
None
|
ERR2513283
|
Other
|
lineage5.1.4
|
None
|
ERR2512770
|
Other
|
lineage4.2.1
|
None
|
ERR4818561
|
HR-TB
|
lineage4
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
ERR4818929
|
HR-TB
|
|
None
|
ERR4818615
|
Other
|
|
None
|
SRR5007188
|
Other
|
lineage4
|
None
|
SRR5341396
|
Other
|
lineage4
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR4820335
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR4819322
|
Other
|
lineage4;lineage1.1
|
None
|
ERR4819357
|
Other
|
lineage4.9
|
None
|
ERR2514390
|
Sensitive
|
lineage4.9;lineage3.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR4819759
|
Sensitive
|
lineage4.9
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR2514771
|
RR-TB
|
lineage4.8.2
|
None
|
SRR5341302
|
HR-TB
|
|
None
|
ERR2514821
|
Other
|
lineage2.2.1
|
None
|
ERR4819933
|
Other
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
ERR2515026
|
Sensitive
|
lineage4.3.2
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR5341333
|
HR-TB
|
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2515228
|
Other
|
lineage2.2.1
|
None
|
SRR6045526
|
HR-TB
|
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR4821811
|
RR-TB
|
lineage4.9
|
None
|
ERR4821057
|
HR-TB
|
lineage4
|
None
|
ERR4821276
|
Other
|
lineage3
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4821747
|
MDR-TB
|
lineage4.9;lineage4.2.1
|
None
|
SRR6045796
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR6044790
|
HR-TB
|
|
None
|
SRR6046259
|
Sensitive
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR6044855
|
Other
|
lineage4.9
|
None
|
SRR6045002
|
MDR-TB
|
lineage4.9
|
None
|
SRR6046066
|
HR-TB
|
|
None
|
SRR6045327
|
HR-TB
|
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
HR-TB
|
|
None
|
SRR6046305
|
Other
|
lineage4.9
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6046397
|
Other
|
|
None
|
SRR6046644
|
HR-TB
|
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4831545
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR6785262
|
Sensitive
|
lineage4.2.1
|
None
|
ERR4831546
|
HR-TB
|
lineage2.2
|
None
|
ERR4831638
|
Sensitive
|
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
SRR6785527
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785413
|
Other
|
lineage2.2.1
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR294266
|
HR-TB
|
|
None
|
SRR6982365
|
Other
|
lineage2.2.1
|
None
|
ERR502532
|
HR-TB
|
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR9970980
|
Other
|
lineage4.1.2
|
None
|
ERR502943
|
HR-TB
|
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR7585435
|
Other
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
DRR184982
|
RR-TB
|
lineage2.2.1
|
None
|
ERR323043
|
HR-TB
|
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR067712
|
HR-TB
|
lineage4
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR1034652
|
Other
|
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR3283043
|
Other
|
lineage4.9
|
None
|
ERR3283027
|
HR-TB
|
|
None
|
ERR3283051
|
Other
|
lineage4.9
|
None
|
ERR3283036
|
HR-TB
|
|
None
|
ERR3797058
|
Other
|
lineage4.9
|
None
|
ERR3324368
|
RR-TB
|
lineage6.2.3;lineage1.1.2
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR3797069
|
Other
|
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR400320
|
Sensitive
|
lineage4
|
None
|
ERR400336
|
Sensitive
|
lineage4
|
None
|
ERR400326
|
Sensitive
|
lineage4
|
None
|
ERR400345
|
Other
|
lineage4
|
None
|
ERR4596902
|
HR-TB
|
lineage3
|
None
|
ERR4187652
|
Other
|
lineage4.9
|
None
|
ERR4407452
|
Sensitive
|
lineage3
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4769552
|
Other
|
La1.3
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
ERR4769550
|
Other
|
lineage4.9;La1.3
|
None
|
ERR4769497
|
HR-TB
|
La1.2
|
None
|
ERR4769516
|
Other
|
La1.3
|
None
|
ERR4769553
|
RR-TB
|
lineage4.9
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2
|
None
|
ERR4769555
|
Other
|
La1.3
|
None
|
ERR4797037
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4797350
|
Sensitive
|
lineage4.9
|
None
|
ERR4797313
|
HR-TB
|
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799171
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4811030
|
Sensitive
|
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR12015083
|
Other
|
lineage4.8;La3
|
None
|
ERR4810741
|
HR-TB
|
|
None
|
ERR4811022
|
HR-TB
|
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR4799547
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4811105
|
HR-TB
|
|
None
|
ERR5336148
|
Other
|
|
None
|
ERR4812155
|
Sensitive
|
|
None
|
ERR4811142
|
MDR-TB
|
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR702406
|
HR-TB
|
|
None
|
ERR6359070
|
Other
|
lineage4.9
|
None
|
ERR6198317
|
Other
|
La1.2
|
None
|
ERR6359069
|
Other
|
lineage4.9
|
None
|
ERR736867
|
HR-TB
|
|
None
|
ERR736874
|
HR-TB
|
|
None
|
ERR9117709
|
HR-TB
|
|
None
|
ERR7821126
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
ERR7911670
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR9117721
|
HR-TB
|
lineage1.1.2
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9786164
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786507
|
Sensitive
|
lineage4.7
|
None
|
ERR9786526
|
Other
|
lineage4.8;lineage4.1
|
None
|
ERR9786525
|
Other
|
lineage4.8;lineage4.1
|
None
|
ERR9786617
|
Other
|
lineage4.1.1
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9786604
|
Other
|
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR9786671
|
Other
|
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR9787165
|
Other
|
lineage6
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1140724
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1169194
|
Other
|
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR1172234
|
Other
|
|
None
|
SRR1172857
|
MDR-TB
|
|
None
|
SRR1172728
|
MDR-TB
|
|
None
|
SRR1172817
|
HR-TB
|
|
None
|
SRR1172844
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1172951
|
Other
|
|
None
|
SRR1173153
|
HR-TB
|
|
None
|
SRR1173118
|
Other
|
|
None
|
SRR1173218
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1173166
|
Other
|
lineage4.9
|
None
|
SRR1173185
|
HR-TB
|
lineage4.9
|
None
|
SRR1173384
|
Other
|
lineage4
|
None
|
SRR1173363
|
HR-TB
|
|
None
|
SRR1173281
|
RR-TB
|
lineage3
|
None
|
SRR1173330
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1173484
|
Other
|
lineage4
|
None
|
SRR1173400
|
Other
|
|
None
|
SRR1173562
|
HR-TB
|
lineage4
|
None
|
SRR1173629
|
Other
|
|
None
|
SRR1173633
|
HR-TB
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR1175074
|
MDR-TB
|
|
None
|
SRR1173788
|
Other
|
|
None
|
SRR1175049
|
RR-TB
|
|
None
|
SRR1175090
|
Other
|
lineage4.9
|
None
|
SRR1175473
|
Other
|
lineage4.9
|
None
|
SRR1175507
|
MDR-TB
|
lineage4
|
None
|
SRR1175474
|
HR-TB
|
lineage4.9
|
None
|
SRR1175472
|
MDR-TB
|
lineage4
|
None
|
SRR1175496
|
HR-TB
|
lineage4.9
|
None
|
SRR1175500
|
MDR-TB
|
lineage4
|
None
|
SRR1175491
|
MDR-TB
|
lineage4
|
None
|
SRR1175508
|
Other
|
lineage4.9
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR1183049
|
Other
|
lineage2.2
|
None
|
SRR1183106
|
Other
|
lineage2.2.1.1
|
None
|
SRR1184294
|
HR-TB
|
|
None
|
SRR1184024
|
Other
|
lineage2.2.1.1
|
None
|
SRR1184329
|
MDR-TB
|
lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184312
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1184380
|
HR-TB
|
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1184388
|
Other
|
|
None
|
SRR1196478
|
MDR-TB
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR1196474
|
HR-TB
|
lineage3.1
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
SRR1196566
|
HR-TB
|
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1196677
|
HR-TB
|
lineage2
|
None
|
SRR1196546
|
HR-TB
|
|
None
|
SRR12142341
|
HR-TB
|
|
None
|
SRR11972417
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR12416824
|
HR-TB
|
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR13837507
|
HR-TB
|
lineage4.9
|
None
|
SRR13837525
|
Sensitive
|
lineage4.9
|
None
|
SRR15368973
|
Other
|
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR19303884
|
HR-TB
|
|
None
|
SRR18213713
|
HR-TB
|
lineage4.5
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR20969677
|
HR-TB
|
lineage2
|
None
|
SRR19304036
|
HR-TB
|
|
None
|
SRR2010299
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827418
|
Pre-XDR-TB
|
lineage9;lineage3.1
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR12708416
|
Sensitive
|
lineage4.1
|
None
|
ERR11081257
|
Other
|
lineage4.8
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR26937071
|
MDR-TB
|
lineage2.2.1;La3
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
lineage4.9;La3
|
None
|
SRR23961542
|
Other
|
lineage4.9;La1
|
None
|
SRR23961559
|
Other
|
lineage4.2;La1.7
|
None
|
SRR23961558
|
Other
|
lineage6.3;lineage4.9;lineage2.1
|
None
|
SRR28119811
|
Other
|
lineage6.3;lineage2.2.1
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR25827452
|
MDR-TB
|
lineage4.2.2.2;lineage2.2.1;lineage1.1.2
|
None
|
ERR4815604
|
HR-TB
|
|
None
|
SRR25827497
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
ERR176793
|
Other
|
lineage4.1.1
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR3675477
|
Other
|
lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3675465
|
HR-TB
|
|
None
|