Run ID: SRR1062919
Sample name:
Date: 02-04-2023 18:40:31
Number of reads: 738205
Percentage reads mapped: 27.33
Strain: lineage2.2.1
Drug-resistance: HR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage2 | East-Asian | Beijing | RD105 | 0.93 |
lineage2.2 | East-Asian (Beijing) | Beijing-RD207 | RD105;RD207 | 1.0 |
lineage2.2.1 | East-Asian (Beijing) | Beijing-RD181 | RD105;RD207;RD181 | 0.98 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1473246 | n.1401A>G | non_coding_transcript_exon_variant | 0.21 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.79 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.65 | kanamycin, capreomycin, aminoglycosides, amikacin |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid |
embB | 4247431 | p.Met306Ile | missense_variant | 1.0 | ethambutol |
ethA | 4327294 | p.Tyr60* | stop_gained | 1.0 | ethionamide |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6374 | p.Glu379* | stop_gained | 0.12 |
gyrA | 6673 | c.-629A>C | upstream_gene_variant | 0.15 |
gyrA | 6676 | c.-626T>G | upstream_gene_variant | 0.14 |
gyrB | 6680 | p.Leu481Ile | missense_variant | 0.14 |
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.15 |
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 0.15 |
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.15 |
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.17 |
gyrA | 6769 | c.-533C>T | upstream_gene_variant | 0.17 |
gyrB | 6770 | p.Thr511Ala | missense_variant | 0.17 |
gyrA | 6775 | c.-527G>C | upstream_gene_variant | 0.17 |
gyrB | 6787 | p.Glu516Asp | missense_variant | 0.18 |
gyrB | 6794 | p.Ile519Leu | missense_variant | 0.18 |
gyrB | 6797 | p.Gly520Ser | missense_variant | 0.2 |
gyrB | 6803 | p.Leu522Val | missense_variant | 0.33 |
gyrA | 6841 | c.-461T>C | upstream_gene_variant | 0.4 |
gyrA | 6844 | c.-458T>C | upstream_gene_variant | 0.4 |
gyrA | 6853 | c.-449A>G | upstream_gene_variant | 0.27 |
gyrA | 6856 | c.-446T>C | upstream_gene_variant | 0.2 |
gyrA | 6859 | c.-443T>C | upstream_gene_variant | 0.2 |
gyrB | 6860 | p.Ser541Arg | missense_variant | 0.2 |
gyrA | 6865 | c.-437G>C | upstream_gene_variant | 0.2 |
gyrA | 6869 | c.-433T>C | upstream_gene_variant | 0.2 |
gyrA | 6872 | c.-430T>C | upstream_gene_variant | 0.2 |
gyrA | 6878 | c.-424T>C | upstream_gene_variant | 0.22 |
gyrA | 6881 | c.-421T>C | upstream_gene_variant | 0.22 |
gyrA | 6889 | c.-413G>C | upstream_gene_variant | 0.2 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7380 | c.79_81delAGCinsTCG | synonymous_variant | 0.29 |
gyrA | 7384 | p.Tyr28Phe | missense_variant | 0.26 |
gyrA | 7394 | c.93T>C | synonymous_variant | 0.26 |
gyrA | 7414 | p.Gly38Ala | missense_variant | 0.3 |
gyrA | 7418 | c.117C>G | synonymous_variant | 0.32 |
gyrA | 7421 | c.120G>C | synonymous_variant | 0.26 |
gyrA | 7430 | p.Glu43Asp | missense_variant | 0.26 |
gyrA | 7442 | c.141G>A | synonymous_variant | 0.29 |
gyrA | 7451 | c.150C>G | synonymous_variant | 0.29 |
gyrA | 7457 | c.156T>C | synonymous_variant | 0.24 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 7631 | c.330G>C | synonymous_variant | 0.23 |
gyrA | 7637 | c.336C>G | synonymous_variant | 0.21 |
gyrA | 7658 | c.357A>C | synonymous_variant | 0.17 |
gyrA | 7664 | c.363T>C | synonymous_variant | 0.19 |
gyrA | 7698 | p.Arg133Trp | missense_variant | 0.13 |
gyrA | 8264 | c.963T>C | synonymous_variant | 0.35 |
gyrA | 8267 | c.966G>C | synonymous_variant | 0.38 |
gyrA | 8270 | c.969G>C | synonymous_variant | 0.47 |
gyrA | 8283 | p.Ile328Leu | missense_variant | 0.61 |
gyrA | 8288 | c.987T>C | synonymous_variant | 0.6 |
gyrA | 8294 | c.993T>G | synonymous_variant | 0.65 |
gyrA | 8296 | p.Tyr332Phe | missense_variant | 0.65 |
gyrA | 8320 | p.Ser340Asn | missense_variant | 0.58 |
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.58 |
gyrA | 8339 | c.1038A>G | synonymous_variant | 0.54 |
gyrA | 8342 | c.1041G>C | synonymous_variant | 0.54 |
gyrA | 8366 | c.1065G>C | synonymous_variant | 0.43 |
gyrA | 8754 | p.Glu485Lys | missense_variant | 0.18 |
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.29 |
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.32 |
gyrA | 8906 | c.1605C>G | synonymous_variant | 0.33 |
gyrA | 8907 | p.Ser536Ala | missense_variant | 0.33 |
gyrA | 8915 | c.1614A>G | synonymous_variant | 0.54 |
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.61 |
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.65 |
gyrA | 8945 | c.1644G>C | synonymous_variant | 0.65 |
gyrA | 8946 | c.1645_1647delTTGinsCTT | synonymous_variant | 0.65 |
gyrA | 8981 | c.1680G>C | synonymous_variant | 0.54 |
gyrA | 8982 | p.Cys561Ser | missense_variant | 0.52 |
gyrA | 8996 | c.1695T>C | synonymous_variant | 0.55 |
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.55 |
gyrA | 9016 | p.Thr572Asn | missense_variant | 0.25 |
gyrA | 9018 | p.Gln573Lys | missense_variant | 0.25 |
gyrA | 9023 | c.1722A>C | synonymous_variant | 0.2 |
gyrA | 9024 | c.1723C>A | synonymous_variant | 0.2 |
gyrA | 9029 | c.1728T>C | synonymous_variant | 0.21 |
gyrA | 9032 | c.1731T>C | synonymous_variant | 0.19 |
gyrA | 9056 | c.1755C>G | synonymous_variant | 0.13 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 490833 | c.51G>T | synonymous_variant | 0.18 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
ccsA | 620268 | c.378G>A | synonymous_variant | 0.18 |
rpoB | 760418 | c.612G>C | synonymous_variant | 0.14 |
rpoB | 760430 | p.Phe208Leu | missense_variant | 0.32 |
rpoB | 760434 | p.Val210Ile | missense_variant | 0.32 |
rpoB | 760452 | p.Val216Ile | missense_variant | 0.37 |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.24 |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.19 |
rpoB | 760917 | c.1111_1113delCGCinsAGG | synonymous_variant | 0.29 |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.29 |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.29 |
rpoB | 760934 | c.1128C>A | synonymous_variant | 0.38 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.32 |
rpoB | 760953 | p.Ile383Val | missense_variant | 0.32 |
rpoB | 760956 | c.1150C>A | synonymous_variant | 0.33 |
rpoB | 760964 | c.1158C>G | synonymous_variant | 0.38 |
rpoB | 760965 | p.Met387Leu | missense_variant | 0.33 |
rpoB | 760970 | c.1164G>C | synonymous_variant | 0.33 |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.35 |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.43 |
rpoB | 761003 | c.1197C>G | synonymous_variant | 0.46 |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.48 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.44 |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.42 |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.4 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.33 |
rpoB | 761051 | c.1245G>C | synonymous_variant | 0.33 |
rpoB | 761064 | p.Ala420Ser | missense_variant | 0.32 |
rpoB | 761070 | p.Lys422Arg | missense_variant | 0.25 |
rpoB | 761183 | c.1377T>C | synonymous_variant | 0.14 |
rpoB | 761189 | c.1383T>G | synonymous_variant | 0.15 |
rpoB | 761193 | p.Gly463Ser | missense_variant | 0.16 |
rpoB | 761217 | p.Pro471Ser | missense_variant | 0.13 |
rpoB | 761220 | c.1414_1416delTCGinsAGC | synonymous_variant | 0.14 |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.17 |
rpoB | 761255 | c.1449T>C | synonymous_variant | 0.14 |
rpoB | 761318 | c.1512G>C | synonymous_variant | 0.25 |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.29 |
rpoB | 761347 | p.Val514Glu | missense_variant | 0.4 |
rpoB | 761355 | p.Val517Lys | missense_variant | 0.36 |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.33 |
rpoB | 761362 | p.Ser519Thr | missense_variant | 0.33 |
rpoB | 761367 | p.Glu521Gln | missense_variant | 0.33 |
rpoB | 761374 | p.Val523Asp | missense_variant | 0.33 |
rpoB | 761396 | c.1590G>A | synonymous_variant | 0.17 |
rpoB | 761891 | c.2085G>C | synonymous_variant | 0.39 |
rpoB | 761906 | c.2100C>G | synonymous_variant | 0.65 |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.65 |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.62 |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.65 |
rpoB | 761917 | p.Asp704Gly | missense_variant | 0.62 |
rpoB | 761937 | p.Lys711Arg | missense_variant | 0.57 |
rpoB | 761951 | c.2145G>C | synonymous_variant | 0.54 |
rpoB | 761955 | p.Ile717Phe | missense_variant | 0.57 |
rpoB | 761972 | c.2166C>T | synonymous_variant | 0.58 |
rpoB | 761980 | p.Tyr725Phe | missense_variant | 0.47 |
rpoB | 761990 | c.2184G>C | synonymous_variant | 0.36 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.31 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.36 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.36 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.46 |
rpoB | 762084 | p.Ala760Pro | missense_variant | 0.46 |
rpoB | 762099 | c.2293_2295delCGCinsAGG | synonymous_variant | 0.5 |
rpoB | 762110 | c.2304G>C | synonymous_variant | 0.45 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.53 |
rpoB | 762122 | p.Asp772Glu | missense_variant | 0.5 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.47 |
rpoB | 762134 | c.2328C>G | synonymous_variant | 0.47 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.47 |
rpoB | 762149 | c.2343G>T | synonymous_variant | 0.56 |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.65 |
rpoB | 762161 | c.2355C>G | synonymous_variant | 0.61 |
rpoB | 762176 | c.2370T>G | synonymous_variant | 0.61 |
rpoB | 762178 | p.Arg791Gln | missense_variant | 0.61 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.66 |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.77 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.76 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.7 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.67 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.66 |
rpoB | 762278 | c.2472C>T | synonymous_variant | 0.58 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.45 |
rpoB | 762296 | c.2490G>C | synonymous_variant | 0.45 |
rpoB | 762299 | c.2493G>C | synonymous_variant | 0.45 |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.33 |
rpoB | 762318 | p.Ser838Thr | missense_variant | 0.33 |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.17 |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.21 |
rpoB | 762364 | p.Asp853Ala | missense_variant | 0.19 |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.25 |
rpoC | 762374 | c.-996G>C | upstream_gene_variant | 0.23 |
rpoC | 762380 | c.-990T>C | upstream_gene_variant | 0.38 |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 0.45 |
rpoC | 762398 | c.-972T>G | upstream_gene_variant | 0.45 |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 0.5 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.53 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.56 |
rpoB | 762426 | p.Ser874Gln | missense_variant | 0.49 |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.56 |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.6 |
rpoC | 762470 | c.-900G>C | upstream_gene_variant | 0.57 |
rpoC | 762491 | c.-879T>G | upstream_gene_variant | 0.61 |
rpoC | 762503 | c.-867G>C | upstream_gene_variant | 0.59 |
rpoC | 762509 | c.-861T>G | upstream_gene_variant | 0.56 |
rpoB | 762510 | p.Ala902Pro | missense_variant | 0.56 |
rpoC | 762527 | c.-843G>C | upstream_gene_variant | 0.52 |
rpoC | 762533 | c.-837T>C | upstream_gene_variant | 0.42 |
rpoB | 762534 | p.Ile910Val | missense_variant | 0.44 |
rpoC | 762537 | c.-833T>C | upstream_gene_variant | 0.46 |
rpoB | 762543 | p.Thr913Pro | missense_variant | 0.45 |
rpoC | 762581 | c.-789T>C | upstream_gene_variant | 0.22 |
rpoC | 762582 | c.-788T>C | upstream_gene_variant | 0.22 |
rpoB | 762786 | p.Val994Arg | missense_variant | 0.22 |
rpoB | 762789 | p.Leu995Met | missense_variant | 0.22 |
rpoB | 762799 | p.Ala998Val | missense_variant | 0.2 |
rpoB | 762803 | p.Asp999Glu | missense_variant | 0.21 |
rpoC | 762812 | c.-558C>G | upstream_gene_variant | 0.2 |
rpoB | 762813 | p.Met1003Gln | missense_variant | 0.21 |
rpoC | 762818 | c.-552C>G | upstream_gene_variant | 0.28 |
rpoC | 762830 | c.-540C>T | upstream_gene_variant | 0.36 |
rpoC | 762831 | c.-539_-538delAGinsTC | upstream_gene_variant | 0.36 |
rpoB | 762858 | p.Thr1018Ala | missense_variant | 0.57 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.63 |
rpoB | 762878 | p.Ile1024Met | missense_variant | 0.68 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.68 |
rpoB | 762888 | p.His1028Asn | missense_variant | 0.82 |
rpoC | 762918 | c.-452_-450delCGCinsAGG | upstream_gene_variant | 0.84 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.85 |
rpoC | 762995 | c.-375G>C | upstream_gene_variant | 0.72 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.69 |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 1.0 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.62 |
rpoC | 763052 | c.-318G>C | upstream_gene_variant | 0.55 |
rpoC | 763065 | c.-305_-304delTCinsAG | upstream_gene_variant | 0.5 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.57 |
rpoB | 763075 | p.Thr1090Ile | missense_variant | 0.57 |
rpoC | 763085 | c.-285C>G | upstream_gene_variant | 0.71 |
rpoC | 763094 | c.-276G>C | upstream_gene_variant | 0.71 |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.71 |
rpoB | 763104 | p.Ile1100Val | missense_variant | 0.7 |
rpoC | 763109 | c.-261C>G | upstream_gene_variant | 0.68 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.69 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.65 |
rpoC | 763166 | c.-204A>G | upstream_gene_variant | 0.63 |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 0.59 |
rpoB | 763176 | p.Ser1124Ala | missense_variant | 0.62 |
rpoC | 763187 | c.-183C>G | upstream_gene_variant | 0.33 |
rpoC | 763193 | c.-177C>G | upstream_gene_variant | 0.33 |
rpoC | 763480 | c.111C>A | synonymous_variant | 0.26 |
rpoC | 763483 | c.114G>C | synonymous_variant | 0.25 |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.3 |
rpoC | 763504 | c.135C>G | synonymous_variant | 0.5 |
rpoC | 763507 | c.138G>C | synonymous_variant | 0.55 |
rpoC | 763528 | c.159G>C | synonymous_variant | 0.64 |
rpoC | 763531 | c.162G>C | synonymous_variant | 0.66 |
rpoC | 763534 | c.165T>C | synonymous_variant | 0.68 |
rpoC | 763537 | c.168C>G | synonymous_variant | 0.65 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.67 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 0.67 |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.7 |
rpoC | 763621 | c.252C>T | synonymous_variant | 0.68 |
rpoC | 763630 | c.261G>A | synonymous_variant | 0.63 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.6 |
rpoC | 763648 | c.279C>T | synonymous_variant | 0.62 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.57 |
rpoC | 763666 | c.297G>T | synonymous_variant | 0.54 |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.56 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.35 |
rpoC | 763703 | c.334_336delTCGinsAGC | synonymous_variant | 0.35 |
rpoC | 763711 | c.342G>C | synonymous_variant | 0.37 |
rpoC | 763714 | c.345G>T | synonymous_variant | 0.35 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.39 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.43 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.46 |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.46 |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.45 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.46 |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.41 |
rpoC | 763772 | p.Val135Leu | missense_variant | 0.33 |
rpoC | 763786 | c.417C>G | synonymous_variant | 0.13 |
rpoC | 763940 | p.Ala191Ser | missense_variant | 0.17 |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.16 |
rpoC | 763948 | c.579G>C | synonymous_variant | 0.16 |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.14 |
rpoC | 763960 | c.591T>G | synonymous_variant | 0.29 |
rpoC | 763982 | p.Met205Gln | missense_variant | 0.22 |
rpoC | 763987 | c.618C>A | synonymous_variant | 0.22 |
rpoC | 764246 | p.Leu293Ile | missense_variant | 0.38 |
rpoC | 764266 | c.897T>G | synonymous_variant | 0.35 |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.35 |
rpoC | 764284 | c.915G>C | synonymous_variant | 0.36 |
rpoC | 764297 | p.Met310Leu | missense_variant | 0.46 |
rpoC | 764311 | c.942C>G | synonymous_variant | 0.56 |
rpoC | 764315 | p.Ala316Cys | missense_variant | 0.54 |
rpoC | 764339 | p.Leu324Ile | missense_variant | 0.65 |
rpoC | 764359 | c.990C>G | synonymous_variant | 0.59 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.68 |
rpoC | 764381 | c.1012_1013delTCinsAG | synonymous_variant | 0.65 |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.67 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.54 |
rpoC | 764429 | c.1060C>T | synonymous_variant | 0.52 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.5 |
rpoC | 764435 | c.1066A>C | synonymous_variant | 0.46 |
rpoC | 764443 | p.Ile358Met | missense_variant | 0.48 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.48 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.5 |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.45 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.44 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.5 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.45 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.45 |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.5 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.49 |
rpoC | 764524 | c.1155C>T | synonymous_variant | 0.51 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.58 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.64 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.65 |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.64 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.63 |
rpoC | 764644 | c.1275G>C | synonymous_variant | 0.7 |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.75 |
rpoC | 764656 | c.1287C>G | synonymous_variant | 0.78 |
rpoC | 764662 | c.1293G>C | synonymous_variant | 0.78 |
rpoC | 764677 | c.1308C>G | synonymous_variant | 0.76 |
rpoC | 764690 | p.Cys441Ala | missense_variant | 0.79 |
rpoC | 764695 | c.1326T>C | synonymous_variant | 0.8 |
rpoC | 764701 | c.1332C>G | synonymous_variant | 0.82 |
rpoC | 764746 | c.1377G>A | synonymous_variant | 0.7 |
rpoC | 764752 | c.1383G>T | synonymous_variant | 0.66 |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.58 |
rpoC | 764759 | p.Asn464Gly | missense_variant | 0.58 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.6 |
rpoC | 764767 | c.1398G>C | synonymous_variant | 0.61 |
rpoC | 764780 | c.1411_1412delAGinsTC | synonymous_variant | 0.62 |
rpoC | 764791 | c.1422C>G | synonymous_variant | 0.69 |
rpoC | 764812 | c.1443C>G | synonymous_variant | 0.68 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.65 |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.65 |
rpoC | 764830 | c.1461C>G | synonymous_variant | 0.59 |
rpoC | 764833 | c.1464A>G | synonymous_variant | 0.57 |
rpoC | 764844 | p.Ala492Gly | missense_variant | 0.56 |
rpoC | 764847 | p.Glu493Ala | missense_variant | 0.57 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.67 |
rpoC | 764872 | c.1503A>T | synonymous_variant | 0.67 |
rpoC | 764893 | c.1524T>C | synonymous_variant | 0.57 |
rpoC | 764902 | c.1533C>G | synonymous_variant | 0.55 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.53 |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.53 |
rpoC | 764920 | c.1551G>C | synonymous_variant | 0.6 |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.56 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.58 |
rpoC | 764939 | c.1570C>T | synonymous_variant | 0.57 |
rpoC | 764958 | p.Glu530Ala | missense_variant | 0.41 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.33 |
rpoC | 765454 | c.2085C>G | synonymous_variant | 0.33 |
rpoC | 765458 | p.Ile697Val | missense_variant | 0.33 |
rpoC | 765466 | c.2097C>T | synonymous_variant | 0.28 |
rpoC | 765469 | c.2100G>C | synonymous_variant | 0.29 |
rpoC | 765477 | p.Arg703His | missense_variant | 0.29 |
rpoC | 765489 | p.Ile707Ser | missense_variant | 0.29 |
rpoC | 765491 | p.Val708Leu | missense_variant | 0.31 |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.31 |
rpoC | 765506 | p.Val713Leu | missense_variant | 0.28 |
rpoC | 765523 | p.Asp718Glu | missense_variant | 0.33 |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.29 |
rpoC | 765902 | p.Thr845Ser | missense_variant | 0.41 |
rpoC | 765932 | p.Gly855Ser | missense_variant | 0.48 |
rpoC | 765937 | c.2568T>G | synonymous_variant | 0.46 |
rpoC | 765967 | c.2598C>G | synonymous_variant | 0.52 |
rpoC | 765976 | p.Asp869Glu | missense_variant | 0.52 |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.48 |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.44 |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.35 |
rpoC | 765997 | c.2628T>G | synonymous_variant | 0.28 |
rpoC | 766543 | c.3174C>A | synonymous_variant | 0.15 |
rpoC | 766843 | c.3474T>C | synonymous_variant | 0.21 |
rpoC | 766846 | c.3477C>G | synonymous_variant | 0.21 |
rpoC | 766868 | p.Ile1167Val | missense_variant | 0.25 |
rpoC | 767002 | c.3633G>C | synonymous_variant | 0.5 |
rpoC | 767023 | p.Asp1218Glu | missense_variant | 0.54 |
rpoC | 767035 | c.3666G>C | synonymous_variant | 0.44 |
rpoC | 767041 | c.3672G>C | synonymous_variant | 0.38 |
rpoC | 767044 | c.3675G>C | synonymous_variant | 0.46 |
rpoC | 767059 | c.3690T>C | synonymous_variant | 0.37 |
rpoC | 767060 | p.Arg1231Lys | missense_variant | 0.37 |
rpoC | 767068 | c.3699G>C | synonymous_variant | 0.47 |
rpoC | 767077 | c.3708G>C | synonymous_variant | 0.45 |
rpoC | 767087 | p.Cys1240Gly | missense_variant | 0.5 |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.35 |
rpoC | 767101 | p.Lys1244Asn | missense_variant | 0.14 |
rpoC | 767104 | c.3735C>G | synonymous_variant | 0.27 |
rpoC | 767105 | p.Asn1246Val | missense_variant | 0.21 |
rpoC | 767110 | c.3741T>C | synonymous_variant | 0.21 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.27 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 775811 | p.Phe890Leu | missense_variant | 0.2 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 777597 | p.Arg295Pro | missense_variant | 1.0 |
mmpR5 | 778169 | c.-821G>A | upstream_gene_variant | 0.13 |
mmpS5 | 778537 | p.Lys123Asn | missense_variant | 0.15 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781658 | c.99A>G | synonymous_variant | 0.15 |
rpsL | 781700 | c.141G>C | synonymous_variant | 0.19 |
rpsL | 781706 | c.147T>G | synonymous_variant | 0.19 |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.19 |
rpsL | 781772 | c.213C>A | synonymous_variant | 0.2 |
rpsL | 781793 | c.234G>C | synonymous_variant | 0.21 |
rpsL | 781796 | p.Met79Ile | missense_variant | 0.22 |
rpsL | 781805 | c.246G>C | synonymous_variant | 0.25 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.33 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.38 |
rpsL | 781835 | c.276T>C | synonymous_variant | 0.37 |
rpsL | 781838 | c.279G>T | synonymous_variant | 0.35 |
rpsL | 781841 | c.282C>T | synonymous_variant | 0.39 |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.41 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.41 |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.41 |
rpsL | 781877 | c.318T>C | synonymous_variant | 0.41 |
rpsL | 781880 | c.321C>G | synonymous_variant | 0.41 |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.38 |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.37 |
rpsL | 781907 | c.348T>G | synonymous_variant | 0.29 |
rpsL | 781916 | c.357T>G | synonymous_variant | 0.26 |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.22 |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.3 |
rplC | 800615 | c.-194G>C | upstream_gene_variant | 0.32 |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.36 |
rplC | 800630 | c.-179G>T | upstream_gene_variant | 0.46 |
rplC | 800633 | c.-176T>C | upstream_gene_variant | 0.5 |
rplC | 800648 | c.-161A>G | upstream_gene_variant | 0.58 |
rplC | 800672 | c.-137G>C | upstream_gene_variant | 0.72 |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.69 |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.68 |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.68 |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.67 |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.62 |
rplC | 800729 | c.-80G>C | upstream_gene_variant | 0.62 |
rplC | 800735 | c.-74C>G | upstream_gene_variant | 0.55 |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.44 |
rplC | 800886 | c.78G>A | synonymous_variant | 0.2 |
rplC | 801040 | p.Arg78Ser | missense_variant | 0.12 |
rplC | 801103 | p.Gln99Lys | missense_variant | 0.22 |
rplC | 801309 | c.501C>T | synonymous_variant | 0.14 |
fbiC | 1303432 | p.Asp168Asn | missense_variant | 0.14 |
fbiC | 1304635 | p.Gln569* | stop_gained | 0.13 |
Rv1258c | 1406819 | p.Met174Ile | missense_variant | 0.15 |
embR | 1417331 | p.Thr6Ile | missense_variant | 0.17 |
atpE | 1461281 | c.237C>T | synonymous_variant | 0.15 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471923 | n.78T>C | non_coding_transcript_exon_variant | 0.54 |
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 0.57 |
rrs | 1471932 | n.87A>G | non_coding_transcript_exon_variant | 0.62 |
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 0.64 |
rrs | 1471969 | n.124T>C | non_coding_transcript_exon_variant | 0.25 |
rrs | 1471970 | n.125G>A | non_coding_transcript_exon_variant | 0.25 |
rrs | 1471972 | n.127T>C | non_coding_transcript_exon_variant | 0.23 |
rrs | 1471982 | n.137A>T | non_coding_transcript_exon_variant | 0.19 |
rrs | 1471984 | n.140_141delTC | non_coding_transcript_exon_variant | 0.21 |
rrs | 1471997 | n.152T>C | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472005 | n.160T>C | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.43 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.72 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472122 | n.277G>A | non_coding_transcript_exon_variant | 0.81 |
rrs | 1472148 | n.303T>C | non_coding_transcript_exon_variant | 0.86 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.63 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472326 | n.481T>A | non_coding_transcript_exon_variant | 0.58 |
rrs | 1472328 | n.483G>C | non_coding_transcript_exon_variant | 0.58 |
rrs | 1472382 | n.537G>A | non_coding_transcript_exon_variant | 0.72 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472426 | n.581T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472494 | n.649A>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472496 | n.651T>G | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472506 | n.661A>T | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472572 | n.727T>A | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472581 | n.736A>C | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472583 | n.738T>A | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.65 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472674 | n.829T>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472682 | n.837T>A | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472683 | n.838T>C | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472686 | n.841G>T | non_coding_transcript_exon_variant | 0.57 |
rrs | 1472687 | n.842A>C | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.59 |
rrs | 1472791 | n.946G>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472837 | n.992C>T | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.81 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.81 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.7 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.7 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.71 |
rrs | 1473065 | n.1220C>A | non_coding_transcript_exon_variant | 0.73 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.73 |
rrs | 1473097 | n.1252G>A | non_coding_transcript_exon_variant | 0.69 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.66 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.64 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.64 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.65 |
rrs | 1473122 | n.1277T>A | non_coding_transcript_exon_variant | 0.65 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.58 |
rrs | 1473158 | n.1313T>C | non_coding_transcript_exon_variant | 0.56 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.59 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.8 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.74 |
rrs | 1473283 | n.1438T>C | non_coding_transcript_exon_variant | 0.73 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.68 |
rrs | 1473291 | n.1446_1447insT | non_coding_transcript_exon_variant | 0.73 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.71 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1473428 | n.-229delG | upstream_gene_variant | 0.14 |
rrl | 1473471 | n.-187C>A | upstream_gene_variant | 0.21 |
rrl | 1473771 | n.114T>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473788 | n.131A>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1473792 | n.135C>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1473797 | n.140G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473803 | n.146G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473807 | n.150T>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473815 | n.158T>C | non_coding_transcript_exon_variant | 0.55 |
rrl | 1473821 | n.164T>C | non_coding_transcript_exon_variant | 0.7 |
rrl | 1473823 | n.166T>C | non_coding_transcript_exon_variant | 0.73 |
rrl | 1473833 | n.176_177insT | non_coding_transcript_exon_variant | 0.76 |
rrl | 1473844 | n.187C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1473870 | n.213G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1473871 | n.214T>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1473876 | n.219G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1473883 | n.226A>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1473887 | n.230T>A | non_coding_transcript_exon_variant | 0.78 |
rrl | 1473888 | n.231T>C | non_coding_transcript_exon_variant | 0.78 |
rrl | 1473890 | n.233T>C | non_coding_transcript_exon_variant | 0.78 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1473899 | n.242A>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1473916 | n.259C>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1473923 | n.266C>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474097 | n.440C>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474127 | n.470G>A | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474135 | n.478G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474139 | n.482C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1474153 | n.496C>G | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474166 | n.509G>C | non_coding_transcript_exon_variant | 0.32 |
rrl | 1474181 | n.524C>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474201 | n.544T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474202 | n.545T>A | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474263 | n.606G>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1474316 | n.659T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 0.45 |
rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474353 | n.696A>G | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474359 | n.702C>G | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474381 | n.724T>A | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474402 | n.745T>C | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474466 | n.809G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474488 | n.831G>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.68 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474516 | n.859C>T | non_coding_transcript_exon_variant | 0.73 |
rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.72 |
rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474583 | n.926C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474742 | n.1085A>C | non_coding_transcript_exon_variant | 0.28 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.63 |
rrl | 1474784 | n.1127C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.76 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.77 |
rrl | 1474831 | n.1174A>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474837 | n.1180A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474869 | n.1212G>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1474901 | n.1244A>G | non_coding_transcript_exon_variant | 0.65 |
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.65 |
rrl | 1474905 | n.1248T>C | non_coding_transcript_exon_variant | 0.65 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.65 |
rrl | 1474944 | n.1287G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475060 | n.1404delC | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475065 | n.1409_1410delCA | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475079 | n.1422T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475080 | n.1423G>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475081 | n.1424C>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475084 | n.1427G>A | non_coding_transcript_exon_variant | 0.35 |
rrl | 1475090 | n.1433A>T | non_coding_transcript_exon_variant | 0.48 |
rrl | 1475113 | n.1456C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475114 | n.1457C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475116 | n.1459G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475440 | n.1783T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475441 | n.1784T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475442 | n.1785C>A | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475443 | n.1786_1787insA | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475452 | n.1795C>A | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475458 | n.1801C>T | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475460 | n.1803A>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475480 | n.1823A>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475481 | n.1825delA | non_coding_transcript_exon_variant | 0.44 |
rrl | 1475484 | n.1827A>T | non_coding_transcript_exon_variant | 0.41 |
rrl | 1475485 | n.1828C>A | non_coding_transcript_exon_variant | 0.41 |
rrl | 1475486 | n.1829A>G | non_coding_transcript_exon_variant | 0.41 |
rrl | 1475499 | n.1842C>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475536 | n.1879C>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1475538 | n.1881T>A | non_coding_transcript_exon_variant | 0.68 |
rrl | 1475539 | n.1882A>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1475544 | n.1887A>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475573 | n.1916G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.36 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1475649 | n.1992A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475655 | n.1998T>C | non_coding_transcript_exon_variant | 0.53 |
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.61 |
rrl | 1475688 | n.2031G>A | non_coding_transcript_exon_variant | 0.59 |
rrl | 1475692 | n.2035G>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1475707 | n.2050T>C | non_coding_transcript_exon_variant | 0.59 |
rrl | 1475713 | n.2056C>T | non_coding_transcript_exon_variant | 0.65 |
rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1475761 | n.2104C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475764 | n.2107A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475767 | n.2110G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.74 |
rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475883 | n.2226A>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475900 | n.2243A>G | non_coding_transcript_exon_variant | 0.84 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.72 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.52 |
rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476000 | n.2343G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476179 | n.2522C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476213 | n.2556G>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1476229 | n.2572C>A | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476250 | n.2593C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476255 | n.2598A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476257 | n.2600G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476279 | n.2622G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476297 | n.2640C>A | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476423 | n.2766T>C | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476523 | n.2866T>C | non_coding_transcript_exon_variant | 0.65 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476528 | n.2871A>G | non_coding_transcript_exon_variant | 0.65 |
rrl | 1476529 | n.2872A>T | non_coding_transcript_exon_variant | 0.65 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.76 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.76 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.76 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.84 |
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 0.76 |
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.64 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 0.65 |
rrl | 1476630 | n.2973A>G | non_coding_transcript_exon_variant | 0.62 |
rpsA | 1833646 | c.105T>C | synonymous_variant | 0.48 |
rpsA | 1833666 | p.Thr42Ser | missense_variant | 0.57 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.59 |
rpsA | 1833677 | p.Val46Ile | missense_variant | 0.59 |
rpsA | 1833685 | c.144G>C | synonymous_variant | 0.62 |
rpsA | 1833697 | c.156C>G | synonymous_variant | 0.67 |
rpsA | 1833709 | c.168C>T | synonymous_variant | 0.67 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.59 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.61 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.19 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.19 |
rpsA | 1833838 | c.297G>T | synonymous_variant | 0.2 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.21 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.21 |
rpsA | 1833862 | c.321G>T | synonymous_variant | 0.2 |
rpsA | 1833874 | c.333T>G | synonymous_variant | 0.27 |
rpsA | 1833886 | c.345C>G | synonymous_variant | 0.33 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.3 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.55 |
rpsA | 1833970 | c.429G>T | synonymous_variant | 0.52 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.54 |
rpsA | 1833991 | c.450C>G | synonymous_variant | 0.59 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.62 |
rpsA | 1834012 | c.471G>T | synonymous_variant | 0.74 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.73 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.64 |
rpsA | 1834034 | p.Ile165Val | missense_variant | 0.61 |
rpsA | 1834040 | p.Lys167Arg | missense_variant | 0.67 |
rpsA | 1834043 | p.Glu168Gln | missense_variant | 0.62 |
rpsA | 1834046 | p.Ile169Leu | missense_variant | 0.67 |
rpsA | 1834051 | p.Glu170Asp | missense_variant | 0.71 |
rpsA | 1834069 | c.528G>C | synonymous_variant | 0.7 |
rpsA | 1834105 | c.564C>G | synonymous_variant | 0.36 |
rpsA | 1834106 | p.Ala189Gln | missense_variant | 0.36 |
rpsA | 1834135 | c.594G>C | synonymous_variant | 0.31 |
rpsA | 1834150 | c.609G>C | synonymous_variant | 0.17 |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 |
rpsA | 1834187 | p.Val216Leu | missense_variant | 0.18 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.21 |
rpsA | 1834213 | c.672G>C | synonymous_variant | 0.31 |
rpsA | 1834231 | c.690T>G | synonymous_variant | 0.42 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.46 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.52 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.62 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.61 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.6 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.57 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.57 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 0.57 |
rpsA | 1834312 | c.771G>A | synonymous_variant | 0.6 |
rpsA | 1834330 | c.789C>T | synonymous_variant | 0.61 |
rpsA | 1834333 | c.792C>T | synonymous_variant | 0.63 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.73 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 0.67 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.63 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.63 |
rpsA | 1834375 | c.834G>C | synonymous_variant | 0.66 |
rpsA | 1834378 | c.837T>C | synonymous_variant | 0.66 |
rpsA | 1834387 | c.846C>T | synonymous_variant | 0.62 |
rpsA | 1834390 | c.849G>C | synonymous_variant | 0.64 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.67 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.66 |
rpsA | 1834438 | c.897C>T | synonymous_variant | 0.56 |
rpsA | 1834439 | p.Lys300Arg | missense_variant | 0.55 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.6 |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.58 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.56 |
rpsA | 1834477 | c.936C>G | synonymous_variant | 0.4 |
rpsA | 1834480 | c.939C>G | synonymous_variant | 0.38 |
rpsA | 1834481 | p.Glu314Tyr | missense_variant | 0.38 |
rpsA | 1834486 | p.Glu315Asp | missense_variant | 0.38 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.38 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.36 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154239 | p.Thr625Ala | missense_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2156449 | c.-338G>A | upstream_gene_variant | 0.17 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
pncA | 2290051 | c.-810C>A | upstream_gene_variant | 0.22 |
kasA | 2517917 | c.-198G>A | upstream_gene_variant | 0.25 |
kasA | 2517921 | c.-194A>G | upstream_gene_variant | 0.25 |
kasA | 2517934 | c.-181A>T | upstream_gene_variant | 0.29 |
kasA | 2519300 | p.Tyr396Asn | missense_variant | 0.18 |
eis | 2714132 | p.Glu401* | stop_gained | 0.13 |
eis | 2715080 | p.Val85Ile | missense_variant | 0.25 |
folC | 2747395 | p.His68Gln | missense_variant | 0.2 |
ribD | 2987293 | p.Thr152Met | missense_variant | 0.25 |
Rv2752c | 3064851 | p.Met447Ile | missense_variant | 0.14 |
thyX | 3067887 | p.Pro20Leu | missense_variant | 0.13 |
ald | 3086694 | c.-126C>A | upstream_gene_variant | 0.14 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
ald | 3087238 | c.424_426delGCC | conservative_inframe_deletion | 0.18 |
fbiD | 3339564 | c.447G>A | synonymous_variant | 1.0 |
fbiD | 3339592 | p.His159Asp | missense_variant | 0.29 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
fprA | 3474319 | p.Gly105Cys | missense_variant | 0.17 |
fprA | 3475053 | c.1047C>T | synonymous_variant | 0.18 |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 1.0 |
fbiB | 3641684 | p.Ser50Arg | missense_variant | 0.15 |
fbiB | 3642700 | p.Ala389Val | missense_variant | 0.15 |
fbiB | 3642794 | c.1260G>A | synonymous_variant | 0.15 |
rpoA | 3877613 | p.Ile299Val | missense_variant | 0.17 |
rpoA | 3877617 | c.891G>C | synonymous_variant | 0.17 |
rpoA | 3877623 | c.885C>T | synonymous_variant | 0.21 |
rpoA | 3877629 | c.879C>G | synonymous_variant | 0.33 |
rpoA | 3877656 | c.852T>G | synonymous_variant | 0.45 |
rpoA | 3877667 | p.Ser281Ala | missense_variant | 0.43 |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.45 |
rpoA | 3877677 | p.Ala277Gly | missense_variant | 0.47 |
rpoA | 3877680 | c.828G>C | synonymous_variant | 0.5 |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.5 |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.5 |
rpoA | 3877701 | p.Val269Ile | missense_variant | 0.44 |
rpoA | 3877704 | c.804G>C | synonymous_variant | 0.42 |
rpoA | 3877719 | c.789C>T | synonymous_variant | 0.45 |
rpoA | 3877731 | c.777G>C | synonymous_variant | 0.28 |
rpoA | 3877734 | c.774G>C | synonymous_variant | 0.21 |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.2 |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.17 |
rpoA | 3877748 | p.Leu254Met | missense_variant | 0.18 |
rpoA | 3877749 | p.Asp253Glu | missense_variant | 0.18 |
rpoA | 3877752 | p.Asp252Glu | missense_variant | 0.17 |
rpoA | 3877765 | p.Ala248Ser | missense_variant | 0.19 |
rpoA | 3877770 | p.Ser246Ala | missense_variant | 0.19 |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.19 |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.2 |
rpoA | 3877803 | c.705G>T | synonymous_variant | 0.19 |
rpoA | 3877806 | c.702C>T | synonymous_variant | 0.2 |
rpoA | 3878053 | p.Asn152Ser | missense_variant | 1.0 |
rpoA | 3878079 | c.429C>T | synonymous_variant | 0.14 |
rpoA | 3878082 | c.426T>C | synonymous_variant | 0.12 |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.18 |
rpoA | 3878205 | c.303T>A | synonymous_variant | 0.13 |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.14 |
rpoA | 3878227 | p.Thr94Val | missense_variant | 0.14 |
ddn | 3986861 | c.18G>A | synonymous_variant | 0.14 |
clpC1 | 4038554 | p.Ile717Val | missense_variant | 0.3 |
clpC1 | 4038558 | p.Ile716Thr | missense_variant | 0.36 |
clpC1 | 4038587 | c.2118C>G | synonymous_variant | 0.33 |
clpC1 | 4038596 | p.Lys703Arg | missense_variant | 0.25 |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.21 |
clpC1 | 4038743 | c.1962G>C | synonymous_variant | 0.2 |
clpC1 | 4038749 | c.1956C>T | synonymous_variant | 0.48 |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 0.52 |
clpC1 | 4038764 | c.1941C>T | synonymous_variant | 0.59 |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.62 |
clpC1 | 4038779 | c.1926C>G | synonymous_variant | 0.67 |
clpC1 | 4038794 | p.Ser637Thr | missense_variant | 0.67 |
clpC1 | 4038810 | p.Gln632Pro | missense_variant | 0.72 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.74 |
clpC1 | 4038849 | p.Phe619Tyr | missense_variant | 0.19 |
clpC1 | 4038851 | c.1854G>C | synonymous_variant | 0.19 |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.79 |
clpC1 | 4038868 | p.Lys613Gln | missense_variant | 0.26 |
clpC1 | 4038869 | c.1836G>A | synonymous_variant | 0.27 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.49 |
clpC1 | 4038881 | c.1824C>G | synonymous_variant | 0.32 |
clpC1 | 4038896 | c.1809C>T | synonymous_variant | 0.3 |
clpC1 | 4038899 | c.1806C>G | synonymous_variant | 0.22 |
clpC1 | 4038905 | c.1800A>G | synonymous_variant | 0.5 |
clpC1 | 4038911 | c.1794G>C | synonymous_variant | 0.42 |
clpC1 | 4038914 | c.1791G>T | synonymous_variant | 0.39 |
clpC1 | 4038917 | c.1788C>T | synonymous_variant | 0.15 |
clpC1 | 4038923 | c.1780_1782delCTAinsTTG | synonymous_variant | 0.18 |
clpC1 | 4038929 | c.1776G>C | synonymous_variant | 0.17 |
clpC1 | 4038939 | p.Phe589Tyr | missense_variant | 0.15 |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.16 |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.17 |
clpC1 | 4038965 | p.Ile580Val | missense_variant | 0.16 |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.21 |
clpC1 | 4038974 | c.1731T>G | synonymous_variant | 0.22 |
clpC1 | 4038983 | p.Asp574Glu | missense_variant | 0.26 |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.25 |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.25 |
clpC1 | 4039001 | p.Asn568Glu | missense_variant | 0.28 |
clpC1 | 4039007 | c.1698G>C | synonymous_variant | 0.35 |
clpC1 | 4039018 | p.Ser563Thr | missense_variant | 0.44 |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.44 |
clpC1 | 4039028 | c.1677G>A | synonymous_variant | 0.46 |
clpC1 | 4039046 | c.1659C>G | synonymous_variant | 0.45 |
clpC1 | 4039067 | c.1638G>C | synonymous_variant | 0.52 |
clpC1 | 4039070 | c.1635G>C | synonymous_variant | 0.48 |
clpC1 | 4039073 | c.1632C>A | synonymous_variant | 0.46 |
clpC1 | 4039079 | c.1626C>G | synonymous_variant | 0.44 |
clpC1 | 4039082 | c.1623C>T | synonymous_variant | 0.44 |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 0.43 |
clpC1 | 4039090 | c.1615C>T | synonymous_variant | 0.4 |
clpC1 | 4039091 | c.1614G>C | synonymous_variant | 0.4 |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.38 |
clpC1 | 4039117 | p.Lys530Gln | missense_variant | 0.19 |
clpC1 | 4039427 | c.1278G>A | synonymous_variant | 0.29 |
clpC1 | 4039439 | c.1266C>T | synonymous_variant | 0.47 |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 0.5 |
clpC1 | 4039448 | c.1257A>G | synonymous_variant | 0.53 |
clpC1 | 4039454 | c.1251A>G | synonymous_variant | 0.61 |
clpC1 | 4039463 | c.1242C>G | synonymous_variant | 0.65 |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 0.61 |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 0.58 |
clpC1 | 4039472 | c.1233G>C | synonymous_variant | 0.6 |
clpC1 | 4039481 | c.1224T>G | synonymous_variant | 0.6 |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 0.6 |
clpC1 | 4039487 | c.1218G>C | synonymous_variant | 0.5 |
clpC1 | 4039508 | c.1197G>C | synonymous_variant | 0.48 |
clpC1 | 4039517 | c.1188C>G | synonymous_variant | 0.48 |
clpC1 | 4039524 | p.Phe394Tyr | missense_variant | 0.46 |
clpC1 | 4039541 | c.1164C>G | synonymous_variant | 0.26 |
clpC1 | 4039547 | c.1158C>G | synonymous_variant | 0.19 |
clpC1 | 4039553 | c.1152C>G | synonymous_variant | 0.13 |
clpC1 | 4039556 | c.1149G>C | synonymous_variant | 0.12 |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 0.29 |
clpC1 | 4039622 | c.1083C>G | synonymous_variant | 0.33 |
clpC1 | 4039645 | p.His354Asp | missense_variant | 0.26 |
clpC1 | 4039646 | p.Glu353Ala | missense_variant | 0.32 |
clpC1 | 4039649 | c.1056G>C | synonymous_variant | 0.29 |
clpC1 | 4039652 | p.Thr351Asn | missense_variant | 0.29 |
clpC1 | 4039660 | p.Glu349Gln | missense_variant | 0.35 |
clpC1 | 4039661 | p.Gly348Asp | missense_variant | 0.34 |
clpC1 | 4039664 | c.1041G>C | synonymous_variant | 0.34 |
clpC1 | 4039668 | p.Gln346Met | missense_variant | 0.38 |
clpC1 | 4039670 | p.Val345Ile | missense_variant | 0.31 |
clpC1 | 4039682 | c.1023C>T | synonymous_variant | 0.28 |
clpC1 | 4039685 | c.1020C>G | synonymous_variant | 0.28 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.28 |
clpC1 | 4039697 | p.Ala336Pro | missense_variant | 0.72 |
clpC1 | 4039711 | p.Ile332Val | missense_variant | 0.27 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.78 |
clpC1 | 4039730 | c.975C>G | synonymous_variant | 0.39 |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.8 |
clpC1 | 4039742 | c.963C>T | synonymous_variant | 0.43 |
clpC1 | 4039748 | p.Thr319Ser | missense_variant | 0.67 |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.62 |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.48 |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.52 |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.61 |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.52 |
clpC1 | 4039773 | p.Lys311Met | missense_variant | 0.63 |
clpC1 | 4039778 | c.927A>G | synonymous_variant | 0.62 |
clpC1 | 4039787 | c.916_918delTCGinsAGC | synonymous_variant | 0.62 |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.52 |
clpC1 | 4039820 | c.885T>C | synonymous_variant | 0.52 |
clpC1 | 4039829 | c.874_876delTTGinsCTC | synonymous_variant | 0.45 |
clpC1 | 4039838 | p.Leu289Ile | missense_variant | 0.52 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.61 |
clpC1 | 4039855 | p.Leu284Met | missense_variant | 0.55 |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.6 |
clpC1 | 4039875 | p.Asn277Arg | missense_variant | 0.57 |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.58 |
clpC1 | 4039901 | c.804C>G | synonymous_variant | 0.57 |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.57 |
clpC1 | 4039907 | c.798G>A | synonymous_variant | 0.59 |
clpC1 | 4039916 | c.789T>C | synonymous_variant | 0.64 |
clpC1 | 4039929 | c.775_776delAGinsTC | synonymous_variant | 0.52 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.5 |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 0.33 |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.3 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.28 |
clpC1 | 4039955 | c.750G>C | synonymous_variant | 0.29 |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.31 |
clpC1 | 4039967 | p.Gln246His | missense_variant | 0.33 |
clpC1 | 4039994 | p.Glu237Asp | missense_variant | 0.13 |
clpC1 | 4040001 | p.His235Arg | missense_variant | 0.21 |
clpC1 | 4040003 | c.702G>C | synonymous_variant | 0.27 |
clpC1 | 4040015 | c.690G>C | synonymous_variant | 0.64 |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.67 |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.62 |
clpC1 | 4040084 | c.621C>G | synonymous_variant | 0.44 |
clpC1 | 4040087 | c.618G>T | synonymous_variant | 0.41 |
clpC1 | 4040090 | c.615T>C | synonymous_variant | 0.44 |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.44 |
clpC1 | 4040257 | p.Ala150Ser | missense_variant | 0.25 |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 0.33 |
clpC1 | 4040271 | p.Tyr145Phe | missense_variant | 0.33 |
clpC1 | 4040273 | c.432T>C | synonymous_variant | 0.3 |
clpC1 | 4040279 | c.426C>G | synonymous_variant | 0.45 |
clpC1 | 4040288 | p.Ile139Leu | missense_variant | 0.4 |
clpC1 | 4040291 | c.414G>A | synonymous_variant | 0.4 |
clpC1 | 4040308 | c.397C>A | synonymous_variant | 0.68 |
clpC1 | 4040311 | p.Thr132Ser | missense_variant | 0.68 |
clpC1 | 4040315 | p.Glu130Asp | missense_variant | 0.69 |
clpC1 | 4040324 | c.381G>C | synonymous_variant | 0.68 |
clpC1 | 4040348 | c.357G>C | synonymous_variant | 0.67 |
clpC1 | 4040351 | c.354C>T | synonymous_variant | 0.68 |
clpC1 | 4040357 | c.348T>C | synonymous_variant | 0.65 |
clpC1 | 4040363 | c.342A>C | synonymous_variant | 0.61 |
clpC1 | 4040375 | c.330G>C | synonymous_variant | 0.61 |
clpC1 | 4040380 | c.325T>C | synonymous_variant | 0.58 |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 0.59 |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 0.54 |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 0.42 |
clpC1 | 4040414 | c.291G>A | synonymous_variant | 0.44 |
clpC1 | 4040423 | c.282A>G | synonymous_variant | 0.31 |
clpC1 | 4040426 | c.279T>C | synonymous_variant | 0.27 |
clpC1 | 4040431 | c.274T>C | synonymous_variant | 0.25 |
clpC1 | 4040441 | c.264C>G | synonymous_variant | 0.21 |
clpC1 | 4040444 | c.261C>G | synonymous_variant | 0.21 |
clpC1 | 4040450 | c.255A>G | synonymous_variant | 0.2 |
clpC1 | 4040456 | c.249C>G | synonymous_variant | 0.2 |
clpC1 | 4040459 | c.246C>G | synonymous_variant | 0.2 |
clpC1 | 4040465 | c.240T>C | synonymous_variant | 0.21 |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 0.21 |
clpC1 | 4040618 | c.87C>T | synonymous_variant | 0.39 |
clpC1 | 4040644 | c.61A>C | synonymous_variant | 0.37 |
clpC1 | 4040654 | c.51G>A | synonymous_variant | 0.35 |
clpC1 | 4040657 | c.48T>C | synonymous_variant | 0.35 |
clpC1 | 4040669 | c.36C>T | synonymous_variant | 0.33 |
clpC1 | 4040674 | c.31A>C | synonymous_variant | 0.35 |
clpC1 | 4040681 | c.24T>G | synonymous_variant | 0.32 |
clpC1 | 4040690 | c.15T>C | synonymous_variant | 0.33 |
clpC1 | 4040693 | c.12A>G | synonymous_variant | 0.33 |
clpC1 | 4040699 | c.6C>T | synonymous_variant | 0.29 |
panD | 4044034 | c.247delG | frameshift_variant | 0.15 |
embC | 4241212 | c.1350G>A | synonymous_variant | 0.14 |
embC | 4241466 | p.Phe535Tyr | missense_variant | 0.14 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embC | 4242836 | p.Pro992Thr | missense_variant | 0.2 |
embA | 4243460 | c.228C>T | synonymous_variant | 1.0 |
embA | 4244467 | p.Ile412Thr | missense_variant | 0.15 |
aftB | 4267647 | p.Asp397Gly | missense_variant | 1.0 |
whiB6 | 4338410 | c.111delT | frameshift_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
gid | 4407927 | p.Glu92Asp | missense_variant | 1.0 |