Rv3862c - c.111delT
Drug resistance types
12 Sensitive
0 RR-TB
12 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 5 |
| lineage2.2.1 | 16 |
| lineage2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.1 | 9 |
| lineage4.1.1 | 1 |
| lineage4.8 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.4.1.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 47 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29017367 | MDR-TB | lineage4.3.4.1 | None | ERR3132213 | HR-TB | lineage2.2.1 | None | SRR25206889 | Pre-XDR-TB | lineage2.1 | None | SRR29017358 | MDR-TB | lineage4.3.4.1 | None | ERR2512662 | Sensitive | lineage4.3.3 | gb | SRR1049732 | HR-TB | lineage2.2.1 | None | ERR13265771 | Sensitive | lineage2.2.1 | None | ERR2653154 | MDR-TB | lineage4.3.4.1 | None | SRR1049661 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1167324 | MDR-TB | lineage4.4.1.1 | None | SRR26112580 | Sensitive | lineage4.1.1 | None | ERR4799073 | Pre-XDR-TB | lineage4.8 | in | SRR11349202 | MDR-TB | lineage4.1.1.1 | None | ERR10748509 | MDR-TB | lineage4.4.1.1 | None | SRR16088118 | Sensitive | lineage4.3.3 | None | SAMN02381041 | HR-TB | lineage2.2.1 | ug | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | SRR5073825 | Other | lineage4.4.1.2 | vn | SRR6045057 | Sensitive | lineage4.6.2.2 | gb | SRR23340052 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173339 | MDR-TB | lineage4.4.1.1 | None | SRR1049660 | HR-TB | lineage2.2.1 | None | SRR1165244 | MDR-TB | lineage4.4.1.1 | None | SRR1175355 | MDR-TB | lineage4.4.1.1 | None | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | SRR5074192 | Other | lineage4.4.1.2 | vn | SRR1062931 | HR-TB | lineage2.2.1 | None | ERR4798392 | Pre-XDR-TB | lineage4.8 | in | ERR13289750 | Sensitive | lineage4.6.2.2 | None | SRR11342652 | MDR-TB | lineage4.1.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR26124839 | Sensitive | lineage4.3.4.1 | None | SRR10040192 | MDR-TB | lineage2.2.1 | None | SRR26124840 | Sensitive | lineage4.3.4.1 | None | SAMN02381026 | HR-TB | lineage2.2.1 | ug | ERR6866212 | Sensitive | lineage4.3 | None | SRR15723307 | Sensitive | lineage2.2.1 | None | SRR1173150 | MDR-TB | lineage4.4.1.1 | None | SRR29274003 | Pre-XDR-TB | lineage4.8 | None | SRR1062916 | HR-TB | lineage2.2.1 | None | SRR25534294 | Sensitive | lineage2.2.1 | None | SRR1173782 | MDR-TB | lineage4.4.1.1 | None | SRR1140591 | HR-TB | lineage2.2.1 | None | ERR2653192 | HR-TB | lineage4.3.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR25534502 | Sensitive | lineage2.2.1 | None |
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