Rv0667 - c.2448T>C
Drug resistance types
70 Sensitive
70 RR-TB
81 HR-TB
119 MDR-TB
12 Pre-XDR-TB
2 XDR-TB
121 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 22 |
| lineage4.9 | 140 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 12 |
| lineage2.1;lineage4.9 | 5 |
| lineage3 | 14 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1 | 37 |
| M.canetti;lineage2.1;lineage4.9 | 24 |
| La1.8.1 | 5 |
| La1.7.X-unk4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage1.2.1.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| La1.7;lineage4.9 | 12 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage4.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage4.3.3 | 7 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage4.4.2 | 1 |
| 4 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1.2.1 | 3 |
| lineage4.1.1.1 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.2.2 | 5 |
| lineage4.4.1.1.1 | 4 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.2 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.6.5 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.9 | 4 |
| lineage4.9;lineage6.3 | 2 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.2.1 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage4.9 | 6 |
| lineage2.2.1;lineage4 | 2 |
| lineage4 | 2 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2 | 2 |
| lineage3;lineage4 | 2 |
| lineage4.1;lineage4.8 | 2 |
| La1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.1 | 1 |
| La1.7 | 2 |
| lineage4.4.1.2 | 2 |
| La1.4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage1.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage2.2 | 3 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.6.1.1 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage4.4.1.1 | 4 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.9 | 1 |
| La1.7.1 | 3 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage4.3 | 1 |
| lineage1.2.2 | 1 |
| lineage4.5 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.8.1 | 3 |
| lineage4.3.4 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 475 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229366 | Other | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | ERR2446144 | Other | lineage3 | nl | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6044815 | RR-TB | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR10796598 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675243 | MDR-TB | lineage4.9 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR161037 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR9786843 | Other | None | SRR1640750 | RR-TB | None | ERR4796577 | HR-TB | None | ERR11252736 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR212001 | HR-TB | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR13861288 | Other | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6044952 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR11465514 | MDR-TB | lineage4.1.1.1 | None | SRR3675507 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3275220 | Other | lineage3 | nl | ERR926162 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR3797023 | MDR-TB | La1.8.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517528 | RR-TB | lineage3 | nl | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR926160 | Other | lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR13861500 | RR-TB | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR6046210 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3801503 | Other | lineage4.6.2.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4819305 | Sensitive | lineage4.9 | None | ERR4818522 | Other | lineage3 | None | SRR13861400 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR4821143 | Other | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR12015085 | Other | lineage4.8 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR212033 | Other | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926156 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1034791 | MDR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR1166821 | RR-TB | lineage4.1.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3275190 | Other | lineage3 | nl | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046376 | Other | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4830353 | HR-TB | La1.7 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2228899 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR7851312 | Other | La1.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR926155 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR13861224 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4821053 | RR-TB | lineage3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR926165 | Other | lineage4.9 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7240538 | Other | La1.7.1 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR2228838 | Other | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR400345 | Other | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR926163 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR1180250 | Other | lineage4.9 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR12015084 | Other | lineage4.8 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR978767 | RR-TB | lineage4.8 | None |
|---|
