TB-Profiler result

Run: ERR4799171
Summary

Run ID: ERR4799171

Sample name:

Date: 01-04-2023 08:55:19

Number of reads: 1936870

Percentage reads mapped: 84.54

Strain: lineage4.8

Drug-resistance: Pre-XDR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 0.98
lineage4.8 Euro-American (mainly T) T1;T2;T3;T5 RD219 0.92
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
gyrA 7581 p.Asp94His missense_variant 0.91 ofloxacin, moxifloxacin, levofloxacin, fluoroquinolones, ciprofloxacin
rpoB 761155 p.Ser450Leu missense_variant 0.73 rifampicin
katG 2155168 p.Ser315Thr missense_variant 0.93 isoniazid
pncA 2288850 c.391dupG frameshift_variant 0.98 pyrazinamide, pyrazinamide
embB 4249518 p.His1002Arg missense_variant 0.93 ethambutol
ethA 4326922 c.550_551dupGG frameshift_variant 1.0 ethionamide
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6196 c.957C>T synonymous_variant 0.14
gyrB 6268 c.1029C>G synonymous_variant 0.14
gyrB 6280 c.1041T>C synonymous_variant 0.15
gyrB 6286 c.1047T>C synonymous_variant 0.18
gyrB 6292 c.1053G>T synonymous_variant 0.2
gyrB 6295 c.1056A>G synonymous_variant 0.2
gyrA 6307 c.-995T>G upstream_gene_variant 0.17
gyrA 6970 c.-332C>T upstream_gene_variant 0.13
gyrA 6973 c.-329G>C upstream_gene_variant 0.14
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7694 c.393A>G synonymous_variant 0.17
gyrA 7697 c.396C>G synonymous_variant 0.15
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 0.15
gyrA 8177 c.876A>C synonymous_variant 0.16
gyrA 8693 c.1392T>C synonymous_variant 0.14
gyrA 8711 c.1410A>C synonymous_variant 0.14
gyrA 8717 c.1416C>G synonymous_variant 0.14
gyrA 8719 p.Glu473Gly missense_variant 0.14
gyrA 8729 c.1428T>C synonymous_variant 0.14
gyrA 8740 p.Arg480His missense_variant 0.2
gyrA 8747 c.1446A>G synonymous_variant 0.2
gyrA 8751 p.Ala484Ser missense_variant 0.19
gyrA 8762 c.1461G>C synonymous_variant 0.19
gyrA 8767 p.Arg489Lys missense_variant 0.18
gyrA 8796 p.Ile499Val missense_variant 0.16
gyrA 8801 c.1500G>C synonymous_variant 0.15
gyrA 8810 c.1509A>T synonymous_variant 0.15
gyrA 8818 p.Ser506Asn missense_variant 0.14
gyrA 8903 c.1602T>C synonymous_variant 0.16
gyrA 8918 c.1617C>G synonymous_variant 0.18
gyrA 8946 c.1645T>C synonymous_variant 0.23
gyrA 8966 c.1665C>G synonymous_variant 0.2
gyrA 8967 p.Ala556Arg missense_variant 0.18
gyrA 8984 c.1683C>T synonymous_variant 0.19
gyrA 8990 c.1689C>G synonymous_variant 0.19
gyrA 8996 c.1695T>C synonymous_variant 0.2
gyrA 8998 p.Leu566Trp missense_variant 0.18
gyrA 9023 c.1722A>C synonymous_variant 0.16
gyrA 9029 c.1728T>C synonymous_variant 0.15
gyrA 9032 c.1731T>C synonymous_variant 0.15
gyrA 9035 c.1734G>C synonymous_variant 0.17
gyrA 9051 c.1750T>C synonymous_variant 0.18
gyrA 9056 c.1755C>G synonymous_variant 0.18
gyrA 9065 c.1764C>T synonymous_variant 0.18
gyrA 9068 c.1767G>A synonymous_variant 0.18
gyrA 9071 c.1770G>C synonymous_variant 0.18
gyrA 9074 c.1773G>T synonymous_variant 0.18
gyrA 9080 c.1779G>T synonymous_variant 0.18
gyrA 9089 c.1788G>C synonymous_variant 0.15
gyrA 9092 c.1791C>G synonymous_variant 0.15
gyrA 9101 c.1800A>G synonymous_variant 0.14
gyrA 9104 c.1803C>G synonymous_variant 0.15
gyrA 9119 c.1818A>G synonymous_variant 0.15
gyrA 9122 c.1821C>G synonymous_variant 0.14
fgd1 491144 p.Ala121Asp missense_variant 0.13
fgd1 491166 c.384G>C synonymous_variant 0.18
fgd1 491181 c.399T>C synonymous_variant 0.18
fgd1 491191 p.Gly137Arg missense_variant 0.17
fgd1 491194 c.412C>T synonymous_variant 0.14
fgd1 491259 c.477T>C synonymous_variant 0.16
mshA 575617 c.270C>G synonymous_variant 0.16
mshA 575623 c.276C>G synonymous_variant 0.17
mshA 575680 c.333C>T synonymous_variant 0.16
mshA 575704 c.357T>G synonymous_variant 0.18
mshA 575705 c.358_360delTTGinsCTC synonymous_variant 0.18
mshA 575713 c.366G>A synonymous_variant 0.2
mshA 575728 c.381C>G synonymous_variant 0.23
mshA 575734 c.387T>G synonymous_variant 0.21
mshA 575737 c.390T>C synonymous_variant 0.2
mshA 575746 c.399C>G synonymous_variant 0.18
mshA 575752 c.405G>C synonymous_variant 0.17
mshA 575756 c.409C>T synonymous_variant 0.17
mshA 575770 c.423G>C synonymous_variant 0.17
mshA 575771 p.Val142Ser missense_variant 0.18
mshA 575779 c.432A>G synonymous_variant 0.18
mshA 575785 c.438T>C synonymous_variant 0.18
mshA 575812 c.465C>T synonymous_variant 0.16
ccsA 620226 c.336G>A synonymous_variant 0.2
ccsA 620238 c.348G>C synonymous_variant 0.19
ccsA 620245 c.355T>C synonymous_variant 0.2
ccsA 620249 p.Ser120Cys missense_variant 0.19
ccsA 620256 c.366C>G synonymous_variant 0.18
ccsA 620265 c.375C>G synonymous_variant 0.16
ccsA 620275 c.385C>T synonymous_variant 0.16
ccsA 620283 c.393T>C synonymous_variant 0.16
ccsA 620284 p.Ala132Pro missense_variant 0.16
ccsA 620288 p.Arg133Gln missense_variant 0.16
ccsA 620295 c.405G>C synonymous_variant 0.2
ccsA 620310 c.420C>T synonymous_variant 0.22
ccsA 620319 c.429C>G synonymous_variant 0.21
ccsA 620337 c.447C>G synonymous_variant 0.16
ccsA 620569 p.Gly227Arg missense_variant 0.14
ccsA 620607 c.717T>G synonymous_variant 0.16
ccsA 620613 c.723C>T synonymous_variant 0.16
ccsA 620622 c.732G>C synonymous_variant 0.16
ccsA 620625 c.735A>C synonymous_variant 0.2
ccsA 620631 c.741T>G synonymous_variant 0.2
ccsA 620634 c.744C>G synonymous_variant 0.21
ccsA 620649 c.759A>G synonymous_variant 0.3
ccsA 620659 c.769_771delCGCinsAGG synonymous_variant 0.29
ccsA 620664 c.774C>T synonymous_variant 0.28
ccsA 620682 c.792G>A synonymous_variant 0.26
ccsA 620688 c.798G>C synonymous_variant 0.26
ccsA 620710 p.Val274Ile missense_variant 0.2
ccsA 620718 c.828G>C synonymous_variant 0.15
ccsA 620721 c.831G>C synonymous_variant 0.17
ccsA 620724 c.834C>T synonymous_variant 0.17
ccsA 620733 c.843G>C synonymous_variant 0.18
ccsA 620734 c.844C>A synonymous_variant 0.18
ccsA 620745 c.855G>C synonymous_variant 0.18
ccsA 620748 c.858T>A synonymous_variant 0.19
ccsA 620760 c.870C>G synonymous_variant 0.16
ccsA 620763 c.873G>A synonymous_variant 0.16
rpoB 760591 p.Val262Ala missense_variant 0.17
rpoB 760595 c.789C>G synonymous_variant 0.18
rpoB 760611 c.805T>C synonymous_variant 0.2
rpoB 760634 c.828T>C synonymous_variant 0.16
rpoB 760646 c.840C>G synonymous_variant 0.17
rpoB 760655 c.849A>G synonymous_variant 0.16
rpoB 760661 c.855A>C synonymous_variant 0.16
rpoB 760679 c.873A>G synonymous_variant 0.16
rpoB 760683 c.877T>C synonymous_variant 0.15
rpoB 760730 c.924T>C synonymous_variant 0.14
rpoB 760991 c.1185G>C synonymous_variant 0.22
rpoB 761006 c.1200C>G synonymous_variant 0.26
rpoB 761015 c.1209G>C synonymous_variant 0.3
rpoB 761021 c.1215G>C synonymous_variant 0.33
rpoB 761027 c.1221A>G synonymous_variant 0.3
rpoB 761037 c.1231T>C synonymous_variant 0.33
rpoB 761057 c.1251G>C synonymous_variant 0.33
rpoB 761075 c.1269G>A synonymous_variant 0.35
rpoB 761102 c.1296A>G synonymous_variant 0.29
rpoB 761129 c.1323G>C synonymous_variant 0.24
rpoB 761132 c.1326G>C synonymous_variant 0.24
rpoB 761133 c.1327T>C synonymous_variant 0.24
rpoB 761147 c.1341C>T synonymous_variant 0.22
rpoB 761150 c.1344A>C synonymous_variant 0.23
rpoB 761153 c.1347G>C synonymous_variant 0.23
rpoB 761165 c.1359G>C synonymous_variant 0.18
rpoB 761171 c.1365C>T synonymous_variant 0.18
rpoB 761180 c.1374A>C synonymous_variant 0.21
rpoB 761189 c.1383T>C synonymous_variant 0.17
rpoB 761195 c.1389G>C synonymous_variant 0.17
rpoB 761198 c.1392G>C synonymous_variant 0.18
rpoB 761213 c.1407G>C synonymous_variant 0.18
rpoB 761220 c.1414_1416delTCGinsAGC synonymous_variant 0.17
rpoB 761492 c.1686G>C synonymous_variant 0.14
rpoB 761510 c.1704T>C synonymous_variant 0.14
rpoB 761834 c.2028T>C synonymous_variant 0.15
rpoB 761858 c.2052G>C synonymous_variant 0.16
rpoB 761867 c.2061C>T synonymous_variant 0.18
rpoB 761873 c.2067A>C synonymous_variant 0.18
rpoB 761885 c.2079T>C synonymous_variant 0.19
rpoB 761891 c.2085G>C synonymous_variant 0.16
rpoB 761903 c.2097T>G synonymous_variant 0.15
rpoB 761912 c.2106T>C synonymous_variant 0.15
rpoB 761915 p.Asp703Glu missense_variant 0.15
rpoB 761916 p.Asp704Asn missense_variant 0.15
rpoB 761942 c.2136C>T synonymous_variant 0.15
rpoB 761948 c.2142G>C synonymous_variant 0.15
rpoB 761954 c.2148C>G synonymous_variant 0.15
rpoB 762011 c.2205G>C synonymous_variant 0.16
rpoB 762017 c.2211A>G synonymous_variant 0.13
rpoB 762053 c.2247T>C synonymous_variant 0.15
rpoB 762062 c.2256T>C synonymous_variant 0.16
rpoB 762065 c.2259T>C synonymous_variant 0.17
rpoB 762068 c.2262C>G synonymous_variant 0.16
rpoB 762083 c.2277T>C synonymous_variant 0.18
rpoB 762086 c.2280G>C synonymous_variant 0.21
rpoB 762101 c.2295C>G synonymous_variant 0.22
rpoB 762114 p.Ile770Val missense_variant 0.23
rpoB 762131 c.2325C>G synonymous_variant 0.21
rpoB 762140 c.2334G>C synonymous_variant 0.19
rpoB 762143 c.2337T>C synonymous_variant 0.18
rpoB 762149 c.2343G>C synonymous_variant 0.24
rpoB 762167 c.2361T>C synonymous_variant 0.24
rpoB 762176 c.2370T>C synonymous_variant 0.27
rpoB 762185 c.2379G>C synonymous_variant 0.32
rpoB 762224 c.2418C>G synonymous_variant 0.34
rpoB 762233 c.2427G>C synonymous_variant 0.33
rpoB 762249 c.2443C>T synonymous_variant 0.34
rpoB 762254 c.2448T>C synonymous_variant 0.32
rpoB 762257 c.2451C>G synonymous_variant 0.3
rpoB 762266 c.2460T>C synonymous_variant 0.29
rpoB 762284 c.2478G>C synonymous_variant 0.25
rpoB 762293 c.2487T>C synonymous_variant 0.29
rpoB 762317 c.2511A>G synonymous_variant 0.26
rpoB 762329 c.2523G>C synonymous_variant 0.22
rpoB 762338 c.2532T>C synonymous_variant 0.18
rpoB 762347 c.2541T>C synonymous_variant 0.16
rpoC 762380 c.-990T>C upstream_gene_variant 0.15
rpoC 762857 c.-513C>G upstream_gene_variant 0.15
rpoC 762863 c.-507T>C upstream_gene_variant 0.15
rpoC 762920 c.-450C>T upstream_gene_variant 0.18
rpoC 762929 c.-441G>T upstream_gene_variant 0.18
rpoC 762957 c.-413C>T upstream_gene_variant 0.23
rpoC 762989 c.-381G>C upstream_gene_variant 0.22
rpoC 762995 c.-375G>T upstream_gene_variant 0.22
rpoC 763013 c.-357C>G upstream_gene_variant 0.2
rpoC 763028 c.-342T>C upstream_gene_variant 0.19
rpoC 763031 c.-339T>C upstream_gene_variant 0.21
rpoC 763034 c.-336C>G upstream_gene_variant 0.16
rpoC 763040 c.-330C>G upstream_gene_variant 0.16
rpoC 763049 c.-321G>A upstream_gene_variant 0.16
rpoC 763214 c.-156T>C upstream_gene_variant 0.14
rpoC 763238 c.-132T>C upstream_gene_variant 0.14
rpoC 763414 c.45T>C synonymous_variant 0.14
rpoC 763441 c.72C>T synonymous_variant 0.21
rpoC 763444 c.75T>C synonymous_variant 0.22
rpoC 763456 c.87A>G synonymous_variant 0.26
rpoC 763486 c.117T>G synonymous_variant 0.24
rpoC 763594 c.225C>T synonymous_variant 0.16
rpoC 763696 c.327T>C synonymous_variant 0.19
rpoC 763708 c.339G>C synonymous_variant 0.16
rpoC 763711 c.342G>C synonymous_variant 0.17
rpoC 763717 c.348T>C synonymous_variant 0.16
rpoC 763723 c.354G>C synonymous_variant 0.15
rpoC 763732 c.363C>G synonymous_variant 0.16
rpoC 763765 c.396T>C synonymous_variant 0.2
rpoC 763771 c.402C>T synonymous_variant 0.23
rpoC 763780 c.411C>G synonymous_variant 0.21
rpoC 763792 p.Glu141Asp missense_variant 0.22
rpoC 763807 c.438T>C synonymous_variant 0.2
rpoC 763813 c.444C>T synonymous_variant 0.17
rpoC 763816 c.447C>G synonymous_variant 0.17
rpoC 763835 p.Ala156Met missense_variant 0.15
rpoC 763853 p.Val162Ile missense_variant 0.18
rpoC 763858 c.489A>G synonymous_variant 0.18
rpoC 763872 p.Gly168Ala missense_variant 0.15
rpoC 763876 p.Glu169Asp missense_variant 0.14
rpoC 763879 c.510A>G synonymous_variant 0.14
rpoC 764083 c.714A>G synonymous_variant 0.15
rpoC 764098 c.729A>G synonymous_variant 0.17
rpoC 764102 p.Val245Ile missense_variant 0.18
rpoC 764112 p.Tyr248Phe missense_variant 0.14
rpoC 764131 c.762T>C synonymous_variant 0.16
rpoC 764188 c.819A>G synonymous_variant 0.2
rpoC 764194 p.Glu275Asp missense_variant 0.18
rpoC 764195 p.Ser276Thr missense_variant 0.18
rpoC 764203 c.834G>C synonymous_variant 0.21
rpoC 764206 c.837T>C synonymous_variant 0.19
rpoC 764257 c.888G>C synonymous_variant 0.19
rpoC 764266 c.897T>C synonymous_variant 0.19
rpoC 764269 c.900G>C synonymous_variant 0.18
rpoC 764272 c.903G>C synonymous_variant 0.19
rpoC 764461 c.1092A>G synonymous_variant 0.15
rpoC 764497 c.1128A>G synonymous_variant 0.22
rpoC 764503 c.1134G>C synonymous_variant 0.22
rpoC 764521 c.1152T>C synonymous_variant 0.23
rpoC 764536 c.1167G>C synonymous_variant 0.26
rpoC 764539 c.1170C>G synonymous_variant 0.26
rpoC 764554 c.1185C>T synonymous_variant 0.28
rpoC 764560 c.1191T>C synonymous_variant 0.29
rpoC 764566 c.1197C>G synonymous_variant 0.28
rpoC 764575 c.1206T>G synonymous_variant 0.27
rpoC 764578 c.1209C>G synonymous_variant 0.27
rpoC 764611 c.1242G>C synonymous_variant 0.22
rpoC 764626 c.1257C>T synonymous_variant 0.19
rpoC 764632 c.1263T>C synonymous_variant 0.19
rpoC 764650 c.1281G>T synonymous_variant 0.19
rpoC 764669 p.Pro434Thr missense_variant 0.74
rpoC 764716 c.1347G>C synonymous_variant 0.22
rpoC 764719 c.1350G>A synonymous_variant 0.21
rpoC 764746 c.1377G>T synonymous_variant 0.25
rpoC 764752 c.1383G>C synonymous_variant 0.25
rpoC 764764 c.1395T>C synonymous_variant 0.33
rpoC 764791 c.1422C>G synonymous_variant 0.31
rpoC 764797 c.1428G>C synonymous_variant 0.3
rpoC 764809 c.1440C>T synonymous_variant 0.25
rpoC 764815 c.1446A>G synonymous_variant 0.27
rpoC 764827 c.1458G>C synonymous_variant 0.22
rpoC 764858 c.1489T>C synonymous_variant 0.23
rpoC 764872 c.1503A>G synonymous_variant 0.25
rpoC 765379 c.2010G>C synonymous_variant 0.16
rpoC 765383 p.Met672Leu missense_variant 0.16
rpoC 765398 c.2029C>T synonymous_variant 0.18
rpoC 765404 p.Leu679Val missense_variant 0.18
rpoC 765409 c.2040T>G synonymous_variant 0.21
rpoC 765452 p.Ala695Ser missense_variant 0.19
rpoC 765478 c.2109T>C synonymous_variant 0.23
rpoC 765499 c.2130C>G synonymous_variant 0.19
rpoC 765508 c.2139C>G synonymous_variant 0.17
rpoC 765529 c.2160C>T synonymous_variant 0.14
rpoC 765541 c.2172C>G synonymous_variant 0.18
rpoC 765553 c.2184C>T synonymous_variant 0.14
rpoC 765556 c.2187G>C synonymous_variant 0.14
rpoC 765772 c.2403C>G synonymous_variant 0.16
rpoC 765784 c.2415C>G synonymous_variant 0.18
rpoC 765793 c.2424C>G synonymous_variant 0.19
rpoC 765796 c.2427C>T synonymous_variant 0.21
rpoC 765811 c.2442T>G synonymous_variant 0.22
rpoC 765826 c.2457T>C synonymous_variant 0.21
rpoC 765871 c.2502T>C synonymous_variant 0.25
rpoC 765877 c.2508C>G synonymous_variant 0.25
rpoC 765886 c.2517C>G synonymous_variant 0.24
rpoC 765892 c.2523T>C synonymous_variant 0.25
rpoC 765982 c.2613C>G synonymous_variant 0.28
rpoC 765994 c.2625A>T synonymous_variant 0.24
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.18
rpoC 766021 c.2652G>C synonymous_variant 0.17
rpoC 766027 c.2658G>C synonymous_variant 0.17
rpoC 766594 c.3225G>C synonymous_variant 0.14
rpoC 766597 c.3228C>G synonymous_variant 0.15
rpoC 766607 p.Ile1080Leu missense_variant 0.15
rpoC 766645 c.3276A>G synonymous_variant 0.16
rpoC 766651 c.3282T>C synonymous_variant 0.17
rpoC 766657 c.3288A>G synonymous_variant 0.19
rpoC 766672 c.3303T>C synonymous_variant 0.16
rpoC 766861 c.3492G>C synonymous_variant 0.17
rpoC 766864 c.3495G>C synonymous_variant 0.19
rpoC 766894 c.3525T>C synonymous_variant 0.22
rpoC 766895 c.3526T>C synonymous_variant 0.21
rpoC 766900 c.3531T>C synonymous_variant 0.2
rpoC 766933 c.3564A>C synonymous_variant 0.19
rpoC 766945 c.3576A>G synonymous_variant 0.17
rpoC 766963 c.3594T>C synonymous_variant 0.19
rpoC 766972 c.3603G>C synonymous_variant 0.19
rpoC 766996 c.3627C>T synonymous_variant 0.19
rpoC 767008 c.3639G>A synonymous_variant 0.17
rpoC 767032 c.3663G>T synonymous_variant 0.19
rpoC 767035 c.3666G>C synonymous_variant 0.19
rpoC 767059 c.3690T>G synonymous_variant 0.17
rpoC 767062 c.3693C>A synonymous_variant 0.17
rpoC 767074 c.3705T>C synonymous_variant 0.15
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775901 c.2580G>A synonymous_variant 0.14
mmpL5 775909 p.Leu858Phe missense_variant 0.19
mmpL5 775913 c.2568C>G synonymous_variant 0.18
mmpL5 775916 c.2565T>G synonymous_variant 0.18
mmpL5 775937 c.2544G>C synonymous_variant 0.19
mmpL5 775940 c.2541C>T synonymous_variant 0.19
mmpL5 775951 c.2530C>T synonymous_variant 0.21
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.19
rpsL 781631 c.72G>C synonymous_variant 0.19
rpsL 781649 c.90T>C synonymous_variant 0.19
rpsL 781655 c.96T>C synonymous_variant 0.19
rpsL 781658 c.99A>G synonymous_variant 0.18
rpsL 781682 c.123T>C synonymous_variant 0.19
rpsL 781715 c.156T>C synonymous_variant 0.22
rpsL 781728 c.169T>C synonymous_variant 0.21
rpsL 781733 c.174G>C synonymous_variant 0.21
rpsL 781736 c.177T>C synonymous_variant 0.2
rpsL 781754 c.195G>C synonymous_variant 0.21
rpsL 781760 c.201T>C synonymous_variant 0.21
rpsL 781769 c.210G>A synonymous_variant 0.16
rpsL 781808 c.249C>T synonymous_variant 0.16
rpsL 781811 c.252C>T synonymous_variant 0.17
rpsL 781820 c.261G>C synonymous_variant 0.17
rpsL 781832 c.273T>C synonymous_variant 0.15
rpsL 781841 c.282C>G synonymous_variant 0.23
rpsL 781865 c.306G>C synonymous_variant 0.16
rpsL 781868 c.309T>C synonymous_variant 0.15
rpsL 781871 c.312G>C synonymous_variant 0.15
rpsL 781877 c.318T>C synonymous_variant 0.15
rpsL 781916 c.357T>C synonymous_variant 0.14
rpsL 781929 p.Gly124Ser missense_variant 0.14
rplC 800814 c.6A>G synonymous_variant 0.17
rplC 800817 c.9A>T synonymous_variant 0.17
rplC 800844 c.36T>C synonymous_variant 0.17
rplC 800865 c.57A>G synonymous_variant 0.16
rplC 800867 p.Ser20Asn missense_variant 0.14
fbiC 1303890 c.960G>C synonymous_variant 0.17
fbiC 1303956 c.1026A>G synonymous_variant 0.14
fbiC 1303961 p.Arg344Leu missense_variant 0.14
fbiC 1303974 c.1044C>T synonymous_variant 0.14
fbiC 1303986 c.1056C>T synonymous_variant 0.14
fbiC 1304868 c.1938G>C synonymous_variant 0.14
fbiC 1304869 c.1939C>T synonymous_variant 0.14
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472300 n.455C>T non_coding_transcript_exon_variant 0.14
rrs 1472753 n.908A>C non_coding_transcript_exon_variant 0.82
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.16
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.13
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.14
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.14
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.21
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.17
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 0.17
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.16
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.15
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.15
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.16
rrl 1473813 n.156C>T non_coding_transcript_exon_variant 0.22
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.35
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.36
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 0.36
rrl 1473943 n.286G>C non_coding_transcript_exon_variant 0.36
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.38
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.4
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.36
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 0.36
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.4
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 1.0
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.36
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.31
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.25
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.28
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.28
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.4
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.33
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.31
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.21
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.14
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.24
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.24
rrl 1474409 n.756_766delACCCACACGCG non_coding_transcript_exon_variant 0.24
rrl 1474427 n.770A>C non_coding_transcript_exon_variant 0.19
rrl 1474429 n.772G>C non_coding_transcript_exon_variant 0.19
rrl 1474435 n.780_783delGAAT non_coding_transcript_exon_variant 0.19
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.2
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.22
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.18
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.21
rrl 1474961 n.1304T>G non_coding_transcript_exon_variant 0.24
rrl 1474963 n.1306G>A non_coding_transcript_exon_variant 0.24
rrl 1474964 n.1307T>C non_coding_transcript_exon_variant 0.24
rrl 1474969 n.1312G>A non_coding_transcript_exon_variant 0.22
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.22
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.3
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.29
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.21
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.21
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.3
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.29
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.31
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.31
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.31
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.32
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.37
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.29
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.26
rrl 1475289 n.1632G>A non_coding_transcript_exon_variant 0.3
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.3
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.3
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.3
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.36
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.27
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.23
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.2
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.26
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.29
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.38
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.37
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.38
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.28
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.28
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.19
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.19
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.25
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.26
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.21
rrl 1476031 n.2374C>T non_coding_transcript_exon_variant 0.2
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.2
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.2
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.21
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.27
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.24
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.24
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.24
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.2
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.2
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.19
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.2
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.21
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.23
rrl 1476214 n.2557G>A non_coding_transcript_exon_variant 0.15
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.15
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.15
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.15
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.18
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.18
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.19
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.19
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.15
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.15
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.23
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.26
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.26
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.25
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.26
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.21
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.19
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.2
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.15
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.14
inhA 1673799 c.-403T>G upstream_gene_variant 0.22
inhA 1673802 c.-400A>G upstream_gene_variant 0.19
inhA 1673808 c.-394A>C upstream_gene_variant 0.21
fabG1 1673832 p.Lys131Asn missense_variant 0.14
inhA 1673838 c.-364T>C upstream_gene_variant 0.15
inhA 1673841 c.-361A>G upstream_gene_variant 0.16
fabG1 1673844 p.Met135Ile missense_variant 0.15
inhA 1673853 c.-349A>C upstream_gene_variant 0.14
inhA 1673856 c.-346T>G upstream_gene_variant 0.16
inhA 1673862 c.-340C>G upstream_gene_variant 0.14
inhA 1673871 c.-331C>T upstream_gene_variant 0.17
inhA 1673877 c.-325C>T upstream_gene_variant 0.17
inhA 1673901 c.-301A>G upstream_gene_variant 0.21
fabG1 1673905 p.Ser156Ala missense_variant 0.19
inhA 1673916 c.-286A>C upstream_gene_variant 0.17
fabG1 1673917 p.Val160Leu missense_variant 0.17
inhA 1673922 c.-280T>C upstream_gene_variant 0.17
fabG1 1673941 p.Ala168Ser missense_variant 0.16
inhA 1673950 c.-252C>T upstream_gene_variant 0.16
inhA 1673961 c.-241A>C upstream_gene_variant 0.15
inhA 1673976 c.-226T>C upstream_gene_variant 0.18
inhA 1673985 c.-217C>G upstream_gene_variant 0.18
fabG1 1674006 p.Asp189Glu missense_variant 0.14
inhA 1674018 c.-184G>C upstream_gene_variant 0.14
inhA 1674542 p.Ala114Glu missense_variant 0.15
inhA 1674555 c.354G>A synonymous_variant 0.15
inhA 1674561 c.360C>T synonymous_variant 0.18
inhA 1674589 p.Met130Leu missense_variant 0.19
inhA 1674597 p.Lys132Asn missense_variant 0.18
inhA 1674618 c.417C>T synonymous_variant 0.17
inhA 1674624 c.423A>C synonymous_variant 0.16
inhA 1674636 c.435C>G synonymous_variant 0.15
inhA 1674660 c.459G>C synonymous_variant 0.16
inhA 1674690 c.489C>G synonymous_variant 0.17
inhA 1674703 c.502T>C synonymous_variant 0.23
inhA 1674708 c.507G>A synonymous_variant 0.23
inhA 1674718 c.517A>C synonymous_variant 0.24
inhA 1674738 c.537C>G synonymous_variant 0.31
inhA 1674746 p.Tyr182Phe missense_variant 0.3
inhA 1674753 c.552G>C synonymous_variant 0.32
inhA 1674756 c.555T>C synonymous_variant 0.32
inhA 1674759 c.558G>C synonymous_variant 0.32
inhA 1674774 c.573A>G synonymous_variant 0.28
inhA 1674777 c.576C>A synonymous_variant 0.26
inhA 1674780 c.579T>G synonymous_variant 0.27
inhA 1674801 c.600T>C synonymous_variant 0.2
inhA 1674816 c.615T>C synonymous_variant 0.2
inhA 1674846 p.Ile215Met missense_variant 0.19
inhA 1674870 c.669T>C synonymous_variant 0.18
inhA 1674879 c.678T>C synonymous_variant 0.14
rpsA 1833637 c.96C>T synonymous_variant 0.17
rpsA 1833649 c.108C>T synonymous_variant 0.19
rpsA 1833661 c.120A>G synonymous_variant 0.18
rpsA 1833667 c.126C>G synonymous_variant 0.2
rpsA 1833724 c.183C>G synonymous_variant 0.16
rpsA 1833727 c.186G>C synonymous_variant 0.14
rpsA 1833730 c.189C>T synonymous_variant 0.14
rpsA 1833733 c.192C>G synonymous_variant 0.16
rpsA 1833745 c.204G>C synonymous_variant 0.16
rpsA 1833748 c.207C>G synonymous_variant 0.15
rpsA 1833928 c.387G>C synonymous_variant 0.19
rpsA 1833940 c.399C>G synonymous_variant 0.2
rpsA 1833971 c.430C>T synonymous_variant 0.22
rpsA 1833976 c.435C>G synonymous_variant 0.25
rpsA 1833979 c.438T>C synonymous_variant 0.24
rpsA 1834000 c.459G>C synonymous_variant 0.23
rpsA 1834021 c.480C>T synonymous_variant 0.24
rpsA 1834030 c.489C>G synonymous_variant 0.21
rpsA 1834222 c.681T>C synonymous_variant 0.15
rpsA 1834240 c.699T>C synonymous_variant 0.16
rpsA 1834249 c.708T>C synonymous_variant 0.15
rpsA 1834259 c.718_720delCTAinsTTG synonymous_variant 0.16
rpsA 1834262 c.721_723delTCGinsAGT synonymous_variant 0.15
rpsA 1834279 c.738C>T synonymous_variant 0.17
rpsA 1834297 c.756C>T synonymous_variant 0.18
rpsA 1834303 c.762T>C synonymous_variant 0.26
rpsA 1834396 c.855G>T synonymous_variant 0.17
rpsA 1834411 c.870T>C synonymous_variant 0.15
rpsA 1834414 c.873C>T synonymous_variant 0.16
rpsA 1834417 c.876G>C synonymous_variant 0.16
rpsA 1834423 c.882G>C synonymous_variant 0.16
rpsA 1834435 c.894G>C synonymous_variant 0.16
rpsA 1834606 c.1065C>T synonymous_variant 0.17
rpsA 1834609 c.1068T>C synonymous_variant 0.18
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.2
rpsA 1834633 c.1092A>G synonymous_variant 0.21
rpsA 1834639 c.1098T>C synonymous_variant 0.21
rpsA 1834654 c.1113G>A synonymous_variant 0.26
rpsA 1834690 c.1149T>C synonymous_variant 0.26
tlyA 1917972 c.33A>G synonymous_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 0.15
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289969 c.-728G>C upstream_gene_variant 0.91
pncA 2289997 c.-756G>C upstream_gene_variant 0.14
pncA 2290006 c.-765T>C upstream_gene_variant 0.15
pncA 2290009 c.-768A>G upstream_gene_variant 0.15
kasA 2517923 c.-192C>G upstream_gene_variant 0.32
kasA 2517926 c.-189G>A upstream_gene_variant 0.32
kasA 2517968 c.-147T>C upstream_gene_variant 0.24
kasA 2517974 c.-141T>G upstream_gene_variant 0.24
kasA 2518843 c.729T>G synonymous_variant 0.16
kasA 2518864 c.750G>C synonymous_variant 0.15
kasA 2518879 c.765A>G synonymous_variant 0.16
kasA 2518882 c.768C>T synonymous_variant 0.15
kasA 2518885 c.771T>C synonymous_variant 0.15
kasA 2518898 c.784T>C synonymous_variant 0.15
kasA 2518906 c.792A>G synonymous_variant 0.14
kasA 2518910 p.Leu266Met missense_variant 0.14
folC 2746353 p.Ala416Ser missense_variant 0.14
Rv2752c 3066018 c.174T>C synonymous_variant 0.13
thyA 3073983 c.489C>G synonymous_variant 0.13
thyA 3074031 c.441T>C synonymous_variant 0.14
thyA 3074034 c.438T>C synonymous_variant 0.14
thyA 3074037 c.435C>G synonymous_variant 0.14
ald 3087647 c.830dupG frameshift_variant 1.0
Rv3083 3448497 c.-7T>A upstream_gene_variant 1.0
rpoA 3877587 c.921A>G synonymous_variant 0.14
rpoA 3877590 c.918G>C synonymous_variant 0.14
rpoA 3877613 p.Ile299Val missense_variant 0.15
rpoA 3877617 c.891G>C synonymous_variant 0.13
rpoA 3877803 c.705G>C synonymous_variant 0.14
rpoA 3877818 c.690A>G synonymous_variant 0.15
rpoA 3877848 c.660C>T synonymous_variant 0.14
rpoA 3877986 c.522G>C synonymous_variant 0.16
rpoA 3877989 c.519A>G synonymous_variant 0.15
rpoA 3878001 c.507A>G synonymous_variant 0.14
rpoA 3878022 c.486T>C synonymous_variant 0.16
rpoA 3878025 c.483C>T synonymous_variant 0.16
rpoA 3878028 c.480G>C synonymous_variant 0.17
rpoA 3878031 c.477T>C synonymous_variant 0.17
rpoA 3878040 c.468T>C synonymous_variant 0.16
rpoA 3878046 c.462T>C synonymous_variant 0.16
rpoA 3878055 c.453A>G synonymous_variant 0.16
rpoA 3878061 c.447G>C synonymous_variant 0.16
rpoA 3878067 c.441C>G synonymous_variant 0.16
rpoA 3878070 c.438T>C synonymous_variant 0.16
rpoA 3878076 c.432C>T synonymous_variant 0.17
rpoA 3878094 c.414C>G synonymous_variant 0.17
rpoA 3878103 c.405A>G synonymous_variant 0.16
rpoA 3878106 c.402G>C synonymous_variant 0.14
rpoA 3878118 c.390T>C synonymous_variant 0.15
rpoA 3878127 c.381G>C synonymous_variant 0.13
clpC1 4038713 c.1992T>C synonymous_variant 0.16
clpC1 4038740 c.1965G>C synonymous_variant 0.2
clpC1 4038755 c.1950G>C synonymous_variant 0.15
clpC1 4038773 c.1932T>C synonymous_variant 0.15
clpC1 4038782 c.1923G>C synonymous_variant 0.14
clpC1 4038812 c.1893T>C synonymous_variant 0.15
clpC1 4038965 c.1740T>C synonymous_variant 0.17
clpC1 4038971 c.1734T>C synonymous_variant 0.16
clpC1 4038974 c.1731T>C synonymous_variant 0.16
clpC1 4038989 c.1716T>C synonymous_variant 0.17
clpC1 4038997 c.1708T>C synonymous_variant 0.16
clpC1 4039022 c.1683A>G synonymous_variant 0.2
clpC1 4039064 c.1641C>T synonymous_variant 0.2
clpC1 4039082 c.1623C>T synonymous_variant 0.2
clpC1 4039085 c.1620A>G synonymous_variant 0.2
clpC1 4039097 c.1608G>C synonymous_variant 0.21
clpC1 4039103 c.1602T>C synonymous_variant 0.19
clpC1 4039106 c.1599G>C synonymous_variant 0.17
clpC1 4039112 c.1593C>A synonymous_variant 0.17
clpC1 4039121 c.1584T>C synonymous_variant 0.14
clpC1 4039292 c.1413C>G synonymous_variant 0.14
clpC1 4039295 c.1410A>C synonymous_variant 0.16
clpC1 4039298 c.1407T>C synonymous_variant 0.17
clpC1 4039319 c.1386T>C synonymous_variant 0.22
clpC1 4039328 c.1377A>C synonymous_variant 0.24
clpC1 4039337 c.1368A>C synonymous_variant 0.24
clpC1 4039349 c.1356C>T synonymous_variant 0.24
clpC1 4039352 c.1353C>G synonymous_variant 0.24
clpC1 4039364 c.1341C>G synonymous_variant 0.2
clpC1 4039391 c.1314T>G synonymous_variant 0.2
clpC1 4039409 c.1296T>C synonymous_variant 0.15
clpC1 4039412 c.1293T>G synonymous_variant 0.15
clpC1 4039415 p.Glu430Asp missense_variant 0.15
clpC1 4039430 c.1275T>C synonymous_variant 0.18
clpC1 4039442 c.1263A>G synonymous_variant 0.16
clpC1 4039556 c.1149G>C synonymous_variant 0.18
clpC1 4039562 c.1143C>G synonymous_variant 0.16
clpC1 4039565 c.1140G>C synonymous_variant 0.16
clpC1 4039570 p.Met379Leu missense_variant 0.17
clpC1 4039574 p.Ala377Pro missense_variant 0.15
clpC1 4039601 c.1104G>C synonymous_variant 0.19
clpC1 4039610 c.1095G>C synonymous_variant 0.21
clpC1 4039661 c.1044T>G synonymous_variant 0.14
clpC1 4039673 c.1032G>C synonymous_variant 0.15
clpC1 4039979 c.726C>G synonymous_variant 0.19
clpC1 4039991 c.714G>C synonymous_variant 0.17
clpC1 4039996 p.Glu237Gln missense_variant 0.18
clpC1 4040021 c.684A>C synonymous_variant 0.22
clpC1 4040024 c.681A>G synonymous_variant 0.22
clpC1 4040033 c.672G>C synonymous_variant 0.18
clpC1 4040057 c.648C>T synonymous_variant 0.18
clpC1 4040090 c.615T>C synonymous_variant 0.23
clpC1 4040105 c.600C>G synonymous_variant 0.18
clpC1 4040117 c.588A>G synonymous_variant 0.17
embC 4240615 c.753G>C synonymous_variant 0.16
embC 4240630 c.768C>G synonymous_variant 0.19
embC 4240632 p.Met257Thr missense_variant 0.19
embC 4240642 c.780G>C synonymous_variant 0.21
embC 4240645 c.783G>C synonymous_variant 0.22
embC 4240670 p.Thr270Val missense_variant 0.21
embC 4240678 c.816T>C synonymous_variant 0.21
embC 4240685 p.Thr275Ala missense_variant 0.2
embC 4240693 c.831T>C synonymous_variant 0.19
embC 4240726 c.864G>C synonymous_variant 0.24
embC 4240819 c.957A>G synonymous_variant 0.15
embC 4240828 c.966G>C synonymous_variant 0.16
embC 4240831 c.969T>C synonymous_variant 0.17
embC 4240837 c.975C>G synonymous_variant 0.15
embC 4241107 c.1245G>C synonymous_variant 0.14
embC 4241140 c.1278A>G synonymous_variant 0.15
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4245137 c.1905T>C synonymous_variant 0.15
embB 4248157 c.1644A>G synonymous_variant 0.15
embB 4248173 p.Val554Met missense_variant 0.16
embB 4248205 c.1692C>G synonymous_variant 0.21
embB 4248206 p.Ser565Gly missense_variant 0.21
embB 4248211 c.1698G>A synonymous_variant 0.2
embB 4248220 c.1707A>G synonymous_variant 0.2
embB 4248304 c.1791G>C synonymous_variant 0.15
ubiA 4269124 p.Ala237Val missense_variant 0.94
ethR 4326844 c.-705G>C upstream_gene_variant 0.99
whiB6 4338362 p.Arg54Gly missense_variant 0.95
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4408061 p.His48Asn missense_variant 1.0
Rv3083 3448507 c.5_*1408del frameshift_variant&stop_lost&splice_region_variant 1.0