Rv0529 - c.798G>C
Drug resistance types
16 Sensitive
1 RR-TB
23 HR-TB
10 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
112 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| lineage4 | 2 |
| lineage4.8 | 4 |
| 22 | |
| lineage4.1.2 | 1 |
| lineage4.6.1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage6.3.1 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage4.9;lineage6.3 | 7 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.1 | 14 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 12 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3 | 3 |
| La3;lineage2.2.2 | 1 |
| La3;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage1.1;lineage4.1.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046133 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4811311 | Other | None | SRR3675248 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | ERR926163 | Other | lineage4.9 | None | ERR9117721 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR926164 | Other | lineage4.9 | None | ERR9117709 | Other | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR2229542 | Other | lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR3675214 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR7496517 | Other | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046066 | Other | lineage4.9 | None | ERR4800341 | Other | None | ERR4816999 | Other | None | ERR4811105 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4811075 | Other | None | ERR926161 | Sensitive | lineage4.9 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | SRR29093909 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | SRR28044634 | Other | lineage3 | None | ERR2514692 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | SRR21690574 | Other | lineage4.1.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736848 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR29097058 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4816100 | Sensitive | lineage1.1;lineage4.1.3 | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4817893 | Other | lineage4.8 | None | SRR7535086 | Other | None | ERR3797073 | Other | La1.8.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR29050928 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR29016780 | Other | lineage4.9 | None | ERR11068570 | Other | lineage4 | None | SRR6046485 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4818615 | Sensitive | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None |
|---|
