TB-Profiler result

Run: SRR13423649
Summary

Run ID: SRR13423649

Sample name:

Date: 03-04-2023 08:56:05

Number of reads: 4626113

Percentage reads mapped: 76.28

Strain: lineage2.2.1

Drug-resistance: Sensitive

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.97
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.98
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.99
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6214 c.975G>C synonymous_variant 0.19
gyrB 6238 c.999G>A synonymous_variant 0.21
gyrB 6242 p.Arg335Lys missense_variant 0.21
gyrB 6250 c.1011A>G synonymous_variant 0.21
gyrB 6277 c.1038C>G synonymous_variant 0.19
gyrB 6280 c.1041T>C synonymous_variant 0.2
gyrB 6286 c.1047T>C synonymous_variant 0.18
gyrB 6292 c.1053G>T synonymous_variant 0.17
gyrB 6295 c.1056A>G synonymous_variant 0.17
gyrB 6299 c.1060C>T synonymous_variant 0.17
gyrA 6304 c.-998C>G upstream_gene_variant 0.17
gyrA 6307 c.-995T>G upstream_gene_variant 0.18
gyrA 6310 c.-992G>C upstream_gene_variant 0.19
gyrA 6319 c.-983G>C upstream_gene_variant 0.19
gyrB 6326 p.Ser363Ala missense_variant 0.2
gyrA 6673 c.-629A>T upstream_gene_variant 0.15
gyrA 6676 c.-626T>G upstream_gene_variant 0.15
gyrA 6700 c.-602T>C upstream_gene_variant 0.17
gyrA 6703 c.-599G>C upstream_gene_variant 0.18
gyrA 6709 c.-593A>G upstream_gene_variant 0.17
gyrA 6712 c.-590G>C upstream_gene_variant 0.16
gyrA 7156 c.-146C>T upstream_gene_variant 0.15
gyrA 7168 c.-134C>G upstream_gene_variant 0.16
gyrA 7177 c.-125G>A upstream_gene_variant 0.16
gyrA 7178 c.-124T>C upstream_gene_variant 0.15
gyrA 7186 c.-116C>G upstream_gene_variant 0.16
gyrA 7213 c.-89G>C upstream_gene_variant 0.2
gyrA 7216 c.-86G>C upstream_gene_variant 0.17
gyrA 7225 c.-77T>C upstream_gene_variant 0.17
gyrA 7243 c.-59G>A upstream_gene_variant 0.15
gyrA 7246 c.-56T>C upstream_gene_variant 0.19
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7790 c.489G>C synonymous_variant 0.15
gyrA 8324 c.1023T>C synonymous_variant 0.19
gyrA 8330 c.1029C>G synonymous_variant 0.18
gyrA 8337 c.1036_1038delCTAinsTTG synonymous_variant 0.17
gyrA 8340 p.Ala347Ser missense_variant 0.16
gyrA 8375 c.1074G>C synonymous_variant 0.17
gyrA 8382 p.Leu361Met missense_variant 0.17
gyrA 8390 c.1089C>G synonymous_variant 0.16
gyrA 8391 p.Tyr364His missense_variant 0.16
gyrA 8399 c.1098T>C synonymous_variant 0.17
gyrA 8401 p.Asp367Ala missense_variant 0.16
gyrA 8420 c.1119T>C synonymous_variant 0.15
gyrA 8423 c.1122G>C synonymous_variant 0.15
gyrA 8426 c.1125G>C synonymous_variant 0.15
gyrA 8435 c.1134C>T synonymous_variant 0.17
gyrA 8453 c.1152A>C synonymous_variant 0.18
gyrA 8459 c.1158G>A synonymous_variant 0.18
gyrA 8462 c.1161A>C synonymous_variant 0.16
gyrA 8486 c.1185T>C synonymous_variant 0.15
gyrA 8501 c.1200G>C synonymous_variant 0.15
gyrA 8510 c.1209G>A synonymous_variant 0.15
gyrA 8519 c.1218A>C synonymous_variant 0.16
gyrA 8537 c.1236G>A synonymous_variant 0.17
gyrA 8546 c.1245T>C synonymous_variant 0.18
gyrA 8561 c.1260A>C synonymous_variant 0.19
gyrA 8588 c.1287G>A synonymous_variant 0.24
gyrA 8591 c.1290C>T synonymous_variant 0.24
gyrA 8603 c.1302A>C synonymous_variant 0.23
gyrA 8619 c.1318T>C synonymous_variant 0.25
gyrA 8633 c.1332C>G synonymous_variant 0.25
gyrA 8636 c.1335A>C synonymous_variant 0.26
gyrA 8642 c.1341A>G synonymous_variant 0.25
gyrA 8645 c.1344C>G synonymous_variant 0.26
gyrA 8672 c.1371A>G synonymous_variant 0.22
gyrA 8678 c.1377G>A synonymous_variant 0.22
gyrA 8693 c.1392T>C synonymous_variant 0.26
gyrA 8696 c.1395G>C synonymous_variant 0.26
gyrA 8711 c.1410A>C synonymous_variant 0.29
gyrA 8714 c.1413A>G synonymous_variant 0.24
gyrA 8717 c.1416C>G synonymous_variant 0.24
gyrA 8720 c.1419G>A synonymous_variant 0.24
gyrA 8729 c.1428T>C synonymous_variant 0.27
gyrA 8732 c.1431G>C synonymous_variant 0.26
gyrA 8747 c.1446A>G synonymous_variant 0.28
gyrA 8751 p.Ala484Thr missense_variant 0.27
gyrA 8756 c.1455A>G synonymous_variant 0.24
gyrA 8762 c.1461G>C synonymous_variant 0.28
gyrA 8767 p.Arg489Lys missense_variant 0.29
gyrA 8783 c.1482G>T synonymous_variant 0.23
gyrA 8786 c.1485T>C synonymous_variant 0.23
gyrA 8790 c.1489C>A synonymous_variant 0.23
gyrA 8796 p.Ile499Val missense_variant 0.24
gyrA 8810 c.1509A>T synonymous_variant 0.26
gyrA 8818 p.Ser506Asn missense_variant 0.27
gyrA 8828 c.1527T>C synonymous_variant 0.24
gyrA 8829 c.1528T>C synonymous_variant 0.24
gyrA 8852 c.1551T>C synonymous_variant 0.29
gyrA 8858 c.1557T>C synonymous_variant 0.3
gyrA 8867 c.1566A>G synonymous_variant 0.25
gyrA 8870 c.1569G>C synonymous_variant 0.25
gyrA 8873 c.1572A>C synonymous_variant 0.24
gyrA 8882 c.1581G>A synonymous_variant 0.26
gyrA 8894 c.1593C>G synonymous_variant 0.26
gyrA 8900 c.1599G>C synonymous_variant 0.25
gyrA 8903 c.1602T>C synonymous_variant 0.26
gyrA 8939 c.1638T>C synonymous_variant 0.19
gyrA 8942 c.1641G>C synonymous_variant 0.19
gyrA 8945 c.1644G>T synonymous_variant 0.18
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.18
gyrA 8967 p.Ala556Arg missense_variant 0.19
gyrA 8981 c.1680G>C synonymous_variant 0.17
gyrA 8982 p.Cys561Ser missense_variant 0.18
gyrA 8990 c.1689C>G synonymous_variant 0.18
gyrA 8996 c.1695T>C synonymous_variant 0.18
gyrA 8998 p.Leu566Trp missense_variant 0.16
gyrA 9002 c.1701C>T synonymous_variant 0.16
gyrA 9017 c.1716C>G synonymous_variant 0.19
gyrA 9023 c.1722A>C synonymous_variant 0.19
gyrA 9029 c.1728T>G synonymous_variant 0.19
gyrA 9032 c.1731T>C synonymous_variant 0.19
gyrA 9038 c.1737C>G synonymous_variant 0.17
gyrA 9095 c.1794C>T synonymous_variant 0.15
gyrA 9101 c.1800A>G synonymous_variant 0.15
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491077 p.Asn99Asp missense_variant 0.16
fgd1 491083 p.Val101Ile missense_variant 0.15
fgd1 491097 c.315G>C synonymous_variant 0.16
fgd1 491106 c.324T>G synonymous_variant 0.18
fgd1 491121 c.339A>G synonymous_variant 0.16
fgd1 491133 c.351A>C synonymous_variant 0.17
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575704 c.357T>C synonymous_variant 0.15
mshA 575713 c.366G>A synonymous_variant 0.17
mshA 575728 c.381C>T synonymous_variant 0.16
mshA 575734 c.387T>G synonymous_variant 0.18
mshA 575737 c.390T>C synonymous_variant 0.19
mshA 575764 c.417C>G synonymous_variant 0.27
mshA 575771 p.Val142Ser missense_variant 0.24
mshA 575785 c.438T>C synonymous_variant 0.23
mshA 575786 p.Tyr147His missense_variant 0.22
mshA 575821 c.474G>C synonymous_variant 0.22
mshA 575824 c.477T>A synonymous_variant 0.23
mshA 575842 c.495G>C synonymous_variant 0.22
mshA 575864 c.517T>C synonymous_variant 0.25
mshA 575878 c.531A>G synonymous_variant 0.22
mshA 575893 c.546C>G synonymous_variant 0.19
mshA 575896 c.549G>C synonymous_variant 0.17
mshA 575902 c.555C>T synonymous_variant 0.17
mshA 575908 c.561A>G synonymous_variant 0.18
mshA 575914 c.567C>G synonymous_variant 0.17
mshA 575916 p.Asp190Ala missense_variant 0.17
mshA 575925 p.Gly193Ala missense_variant 0.18
mshA 575944 c.597T>C synonymous_variant 0.16
mshA 575953 c.606G>C synonymous_variant 0.16
mshA 575959 c.612G>A synonymous_variant 0.14
ccsA 620249 p.Ser120Cys missense_variant 0.16
ccsA 620256 c.366C>G synonymous_variant 0.18
ccsA 620257 p.Ile123Leu missense_variant 0.18
ccsA 620269 p.Val127Phe missense_variant 0.19
ccsA 620283 c.393T>C synonymous_variant 0.19
ccsA 620284 p.Ala132Pro missense_variant 0.19
ccsA 620288 p.Arg133Gln missense_variant 0.18
ccsA 620295 c.405G>C synonymous_variant 0.19
ccsA 620307 c.417C>T synonymous_variant 0.2
ccsA 620319 c.429C>G synonymous_variant 0.17
ccsA 620340 c.450C>G synonymous_variant 0.24
ccsA 620349 c.459A>G synonymous_variant 0.21
ccsA 620362 p.Ala158Thr missense_variant 0.21
ccsA 620367 c.477T>C synonymous_variant 0.23
ccsA 620373 c.483C>G synonymous_variant 0.26
ccsA 620385 c.495G>C synonymous_variant 0.22
ccsA 620388 c.498A>G synonymous_variant 0.22
ccsA 620412 c.522T>C synonymous_variant 0.15
ccsA 620415 c.525T>C synonymous_variant 0.15
ccsA 620433 c.543C>G synonymous_variant 0.15
ccsA 620436 c.546T>C synonymous_variant 0.15
ccsA 620439 c.549T>C synonymous_variant 0.16
ccsA 620445 c.555A>G synonymous_variant 0.17
ccsA 620449 p.Leu187Met missense_variant 0.17
ccsA 620460 c.570T>C synonymous_variant 0.17
ccsA 620461 p.Val191Ile missense_variant 0.17
ccsA 620607 c.717T>G synonymous_variant 0.16
ccsA 620613 c.723C>G synonymous_variant 0.15
ccsA 620619 c.729G>C synonymous_variant 0.16
ccsA 620622 c.732G>C synonymous_variant 0.15
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620631 c.741T>C synonymous_variant 0.15
ccsA 620643 c.753C>G synonymous_variant 0.18
ccsA 620649 c.759A>G synonymous_variant 0.17
ccsA 620652 c.762C>G synonymous_variant 0.16
ccsA 620661 c.771C>G synonymous_variant 0.18
ccsA 620664 c.774C>T synonymous_variant 0.18
ccsA 620688 c.798G>C synonymous_variant 0.22
ccsA 620703 c.813G>C synonymous_variant 0.22
ccsA 620710 p.Val274Ile missense_variant 0.2
ccsA 620721 c.831G>C synonymous_variant 0.2
ccsA 620733 c.843G>C synonymous_variant 0.16
ccsA 620734 c.844C>A synonymous_variant 0.16
ccsA 620739 c.849A>G synonymous_variant 0.16
ccsA 620748 c.858T>G synonymous_variant 0.16
rpoB 760112 c.306T>C synonymous_variant 0.18
rpoB 760118 c.312T>G synonymous_variant 0.22
rpoB 760130 p.Asp108Glu missense_variant 0.22
rpoB 760139 c.333A>G synonymous_variant 0.27
rpoB 760142 c.336C>G synonymous_variant 0.26
rpoB 760181 c.375T>C synonymous_variant 0.25
rpoB 760184 c.378A>G synonymous_variant 0.25
rpoB 760196 c.390C>G synonymous_variant 0.25
rpoB 760223 c.417T>C synonymous_variant 0.22
rpoB 760235 c.429T>C synonymous_variant 0.22
rpoB 760253 c.447T>C synonymous_variant 0.28
rpoB 760283 c.477G>C synonymous_variant 0.21
rpoB 760307 c.501T>C synonymous_variant 0.16
rpoB 760310 c.504G>C synonymous_variant 0.15
rpoB 760313 c.507G>C synonymous_variant 0.15
rpoB 760340 c.534G>C synonymous_variant 0.18
rpoB 760406 c.600G>C synonymous_variant 0.17
rpoB 760424 c.618C>G synonymous_variant 0.19
rpoB 760430 c.624T>C synonymous_variant 0.17
rpoB 760475 c.669A>G synonymous_variant 0.16
rpoB 760481 c.675G>C synonymous_variant 0.15
rpoB 760484 c.678A>G synonymous_variant 0.15
rpoB 760522 p.Ser239Asn missense_variant 0.16
rpoB 760634 c.828T>C synonymous_variant 0.15
rpoB 760670 c.864G>C synonymous_variant 0.15
rpoB 760674 c.868T>C synonymous_variant 0.15
rpoB 760683 c.877T>C synonymous_variant 0.16
rpoB 760991 c.1185G>C synonymous_variant 0.16
rpoB 761015 c.1209G>C synonymous_variant 0.19
rpoB 761027 c.1221A>G synonymous_variant 0.18
rpoB 761036 c.1230G>C synonymous_variant 0.19
rpoB 761037 c.1231T>C synonymous_variant 0.19
rpoB 761060 c.1254C>G synonymous_variant 0.21
rpoB 761096 c.1290G>C synonymous_variant 0.2
rpoB 761097 c.1291_1292delAGinsTC synonymous_variant 0.19
rpoB 761102 c.1296A>G synonymous_variant 0.18
rpoB 761132 c.1326G>T synonymous_variant 0.15
rpoB 761133 c.1327T>C synonymous_variant 0.17
rpoB 761150 c.1344A>C synonymous_variant 0.2
rpoB 761165 c.1359G>C synonymous_variant 0.17
rpoB 761168 c.1362C>G synonymous_variant 0.18
rpoB 761180 c.1374A>C synonymous_variant 0.21
rpoB 761189 c.1383T>G synonymous_variant 0.2
rpoB 761195 c.1389G>C synonymous_variant 0.19
rpoB 761198 c.1392G>C synonymous_variant 0.19
rpoB 761204 c.1398C>G synonymous_variant 0.18
rpoB 761249 c.1443A>G synonymous_variant 0.23
rpoB 761255 c.1449T>G synonymous_variant 0.24
rpoB 761261 c.1455G>T synonymous_variant 0.23
rpoB 761273 c.1467T>C synonymous_variant 0.25
rpoB 761327 c.1521A>G synonymous_variant 0.17
rpoB 761345 c.1539G>C synonymous_variant 0.21
rpoB 761354 c.1548C>T synonymous_variant 0.21
rpoB 761360 c.1554T>C synonymous_variant 0.18
rpoB 761362 p.Ser519Thr missense_variant 0.17
rpoB 761373 p.Val523His missense_variant 0.18
rpoB 761408 c.1602G>C synonymous_variant 0.23
rpoB 761414 c.1608A>G synonymous_variant 0.22
rpoB 761423 c.1617T>C synonymous_variant 0.16
rpoB 761435 c.1629T>C synonymous_variant 0.15
rpoB 761439 p.Asp545Ser missense_variant 0.15
rpoB 761444 c.1638T>C synonymous_variant 0.16
rpoB 761447 c.1641C>G synonymous_variant 0.15
rpoB 761452 p.Val549Glu missense_variant 0.15
rpoB 761457 p.Pro551Ser missense_variant 0.15
rpoB 761477 c.1671C>G synonymous_variant 0.29
rpoB 761483 c.1677G>C synonymous_variant 0.32
rpoB 761492 c.1686G>C synonymous_variant 0.28
rpoB 761504 c.1698C>G synonymous_variant 0.33
rpoB 761510 c.1704T>C synonymous_variant 0.33
rpoB 761531 c.1725C>G synonymous_variant 0.41
rpoB 761537 c.1731C>G synonymous_variant 0.37
rpoB 761564 c.1758G>C synonymous_variant 0.39
rpoB 761570 c.1764T>C synonymous_variant 0.41
rpoB 761573 c.1767C>G synonymous_variant 0.43
rpoB 761579 c.1773G>C synonymous_variant 0.45
rpoB 761606 c.1800C>G synonymous_variant 0.37
rpoB 761612 c.1806G>C synonymous_variant 0.33
rpoB 761615 c.1809A>C synonymous_variant 0.32
rpoB 761636 c.1830G>C synonymous_variant 0.22
rpoB 761645 c.1839C>G synonymous_variant 0.16
rpoB 761648 c.1842T>C synonymous_variant 0.16
rpoB 761657 c.1851C>G synonymous_variant 0.15
rpoB 761765 c.1959T>C synonymous_variant 0.17
rpoB 761772 p.His656Ala missense_variant 0.17
rpoB 761778 p.Asn658Asp missense_variant 0.16
rpoB 761791 p.Arg662His missense_variant 0.18
rpoB 761813 c.2007T>C synonymous_variant 0.24
rpoB 761815 p.Ala670Glu missense_variant 0.24
rpoB 761819 c.2013G>C synonymous_variant 0.27
rpoB 761834 c.2028T>G synonymous_variant 0.3
rpoB 761848 p.Cys681Ser missense_variant 0.31
rpoB 761852 c.2046C>G synonymous_variant 0.28
rpoB 761873 c.2067A>G synonymous_variant 0.3
rpoB 761885 c.2079T>C synonymous_variant 0.28
rpoB 761891 c.2085G>C synonymous_variant 0.28
rpoB 761906 c.2100C>G synonymous_variant 0.24
rpoB 761909 c.2103T>C synonymous_variant 0.2
rpoB 761912 c.2106T>C synonymous_variant 0.22
rpoB 761915 p.Asp703Glu missense_variant 0.22
rpoB 761916 p.Asp704Asn missense_variant 0.22
rpoB 761948 c.2142G>C synonymous_variant 0.2
rpoB 761954 c.2148C>G synonymous_variant 0.2
rpoB 762065 c.2259T>C synonymous_variant 0.17
rpoB 762083 c.2277T>C synonymous_variant 0.18
rpoB 762086 c.2280G>C synonymous_variant 0.16
rpoB 762101 c.2295C>G synonymous_variant 0.23
rpoB 762114 p.Ile770Val missense_variant 0.26
rpoB 762122 c.2316C>T synonymous_variant 0.24
rpoB 762131 c.2325C>G synonymous_variant 0.24
rpoB 762140 c.2334G>C synonymous_variant 0.25
rpoB 762143 c.2337T>C synonymous_variant 0.26
rpoB 762149 c.2343G>C synonymous_variant 0.26
rpoB 762158 c.2352G>C synonymous_variant 0.27
rpoB 762167 c.2361T>C synonymous_variant 0.28
rpoB 762176 c.2370T>C synonymous_variant 0.26
rpoB 762185 c.2379G>C synonymous_variant 0.24
rpoB 762233 c.2427G>C synonymous_variant 0.29
rpoB 762254 c.2448T>G synonymous_variant 0.26
rpoB 762257 c.2451C>G synonymous_variant 0.26
rpoB 762266 c.2460T>C synonymous_variant 0.24
rpoB 762293 c.2487T>C synonymous_variant 0.26
rpoB 762317 c.2511A>G synonymous_variant 0.19
rpoB 762329 c.2523G>C synonymous_variant 0.14
rpoB 762338 c.2532T>C synonymous_variant 0.18
rpoB 762362 p.Glu852Asp missense_variant 0.16
rpoB 762369 c.2563T>C synonymous_variant 0.17
rpoC 762389 c.-981G>A upstream_gene_variant 0.15
rpoC 762395 c.-975G>C upstream_gene_variant 0.15
rpoC 762398 c.-972T>C upstream_gene_variant 0.16
rpoC 762401 c.-969G>C upstream_gene_variant 0.16
rpoC 762404 c.-966T>C upstream_gene_variant 0.19
rpoC 762410 c.-960T>C upstream_gene_variant 0.19
rpoC 762416 c.-954A>G upstream_gene_variant 0.21
rpoC 762434 c.-936T>C upstream_gene_variant 0.19
rpoC 762446 c.-924C>G upstream_gene_variant 0.2
rpoC 762929 c.-441G>C upstream_gene_variant 0.21
rpoC 762962 c.-408C>T upstream_gene_variant 0.25
rpoC 762995 c.-375G>C upstream_gene_variant 0.24
rpoC 763028 c.-342T>C upstream_gene_variant 0.25
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763034 c.-336C>A upstream_gene_variant 0.24
rpoC 763040 c.-330C>G upstream_gene_variant 0.26
rpoC 763070 c.-300T>C upstream_gene_variant 0.26
rpoC 763085 c.-285C>G upstream_gene_variant 0.24
rpoC 763115 c.-255T>C upstream_gene_variant 0.23
rpoC 763127 c.-243G>C upstream_gene_variant 0.25
rpoC 763169 c.-201A>G upstream_gene_variant 0.28
rpoC 763187 c.-183C>G upstream_gene_variant 0.24
rpoC 763202 c.-168A>C upstream_gene_variant 0.22
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.23
rpoC 763214 c.-156T>C upstream_gene_variant 0.24
rpoC 763238 c.-132T>C upstream_gene_variant 0.23
rpoC 763253 c.-117G>C upstream_gene_variant 0.17
rpoC 763272 c.-98C>T upstream_gene_variant 0.16
rpoC 763441 c.72C>T synonymous_variant 0.16
rpoC 763444 c.75T>C synonymous_variant 0.16
rpoC 763456 c.87A>G synonymous_variant 0.18
rpoC 763486 c.117T>C synonymous_variant 0.21
rpoC 763504 c.135C>G synonymous_variant 0.27
rpoC 763528 c.159G>A synonymous_variant 0.26
rpoC 763546 c.177A>G synonymous_variant 0.28
rpoC 763570 c.201G>C synonymous_variant 0.26
rpoC 763573 c.204G>C synonymous_variant 0.26
rpoC 763594 c.225C>T synonymous_variant 0.28
rpoC 763633 c.264T>C synonymous_variant 0.29
rpoC 763636 c.267T>G synonymous_variant 0.29
rpoC 763657 c.288G>A synonymous_variant 0.26
rpoC 763660 c.291T>G synonymous_variant 0.23
rpoC 763666 c.297G>C synonymous_variant 0.23
rpoC 763675 c.306C>G synonymous_variant 0.22
rpoC 763696 c.327T>C synonymous_variant 0.19
rpoC 763708 c.339G>C synonymous_variant 0.19
rpoC 763714 c.345G>C synonymous_variant 0.21
rpoC 763717 c.348T>C synonymous_variant 0.23
rpoC 763723 c.354G>C synonymous_variant 0.22
rpoC 763729 c.360G>C synonymous_variant 0.23
rpoC 763741 c.372C>T synonymous_variant 0.26
rpoC 763744 c.375G>C synonymous_variant 0.27
rpoC 763765 c.396T>G synonymous_variant 0.29
rpoC 763768 c.399C>G synonymous_variant 0.28
rpoC 763774 c.405G>C synonymous_variant 0.26
rpoC 763780 c.411C>G synonymous_variant 0.26
rpoC 763792 p.Glu141Asp missense_variant 0.23
rpoC 763801 c.432C>G synonymous_variant 0.22
rpoC 763807 c.438T>C synonymous_variant 0.21
rpoC 763813 c.444C>G synonymous_variant 0.23
rpoC 763835 p.Ala156Met missense_variant 0.26
rpoC 763855 c.486C>T synonymous_variant 0.22
rpoC 763858 c.489A>G synonymous_variant 0.2
rpoC 763872 p.Gly168Ala missense_variant 0.16
rpoC 763876 p.Glu169Asp missense_variant 0.15
rpoC 763879 c.510A>G synonymous_variant 0.15
rpoC 763891 c.522G>C synonymous_variant 0.15
rpoC 763945 c.576T>C synonymous_variant 0.16
rpoC 763951 c.582G>T synonymous_variant 0.15
rpoC 763960 c.591T>G synonymous_variant 0.15
rpoC 764040 p.Ser224Asn missense_variant 0.17
rpoC 764044 c.675T>C synonymous_variant 0.17
rpoC 764059 c.690G>C synonymous_variant 0.18
rpoC 764083 c.714A>G synonymous_variant 0.18
rpoC 764098 c.729A>G synonymous_variant 0.18
rpoC 764110 c.741C>T synonymous_variant 0.18
rpoC 764131 c.762T>C synonymous_variant 0.19
rpoC 764188 c.819A>G synonymous_variant 0.22
rpoC 764194 p.Glu275Asp missense_variant 0.22
rpoC 764203 c.834G>T synonymous_variant 0.22
rpoC 764206 c.837T>C synonymous_variant 0.23
rpoC 764215 c.846A>G synonymous_variant 0.22
rpoC 764257 c.888G>C synonymous_variant 0.25
rpoC 764266 c.897T>C synonymous_variant 0.24
rpoC 764269 c.900G>C synonymous_variant 0.23
rpoC 764272 c.903G>C synonymous_variant 0.23
rpoC 764278 c.909A>G synonymous_variant 0.24
rpoC 764290 c.921C>T synonymous_variant 0.22
rpoC 764293 c.924G>C synonymous_variant 0.22
rpoC 764344 c.975C>G synonymous_variant 0.19
rpoC 764405 c.1036A>C synonymous_variant 0.15
rpoC 764431 c.1062G>C synonymous_variant 0.15
rpoC 764461 c.1092A>G synonymous_variant 0.17
rpoC 764497 c.1128A>G synonymous_variant 0.18
rpoC 764503 c.1134G>C synonymous_variant 0.18
rpoC 764521 c.1152T>C synonymous_variant 0.2
rpoC 764536 c.1167G>C synonymous_variant 0.2
rpoC 764539 c.1170C>G synonymous_variant 0.17
rpoC 764575 c.1206T>G synonymous_variant 0.21
rpoC 764578 c.1209C>G synonymous_variant 0.22
rpoC 764585 c.1216_1218delCTCinsTTG synonymous_variant 0.22
rpoC 764611 c.1242G>C synonymous_variant 0.22
rpoC 764626 c.1257C>T synonymous_variant 0.22
rpoC 764632 c.1263T>C synonymous_variant 0.21
rpoC 764644 c.1275G>C synonymous_variant 0.24
rpoC 764650 c.1281G>T synonymous_variant 0.25
rpoC 764695 c.1326T>G synonymous_variant 0.25
rpoC 764716 c.1347G>C synonymous_variant 0.24
rpoC 764749 c.1380G>C synonymous_variant 0.2
rpoC 764752 c.1383G>C synonymous_variant 0.19
rpoC 764764 c.1395T>C synonymous_variant 0.2
rpoC 764815 c.1446A>G synonymous_variant 0.16
rpoC 764824 c.1455T>C synonymous_variant 0.17
rpoC 764827 c.1458G>C synonymous_variant 0.16
rpoC 764830 c.1461C>G synonymous_variant 0.17
rpoC 765421 c.2052C>G synonymous_variant 0.17
rpoC 765478 c.2109T>C synonymous_variant 0.23
rpoC 765499 c.2130C>G synonymous_variant 0.26
rpoC 765541 c.2172C>G synonymous_variant 0.27
rpoC 765553 c.2184C>T synonymous_variant 0.29
rpoC 765556 c.2187G>C synonymous_variant 0.28
rpoC 765559 c.2190G>C synonymous_variant 0.23
rpoC 765583 c.2214G>T synonymous_variant 0.29
rpoC 765625 c.2256C>G synonymous_variant 0.34
rpoC 765631 p.Asp754Glu missense_variant 0.32
rpoC 765649 c.2280C>T synonymous_variant 0.26
rpoC 765658 c.2289C>T synonymous_variant 0.23
rpoC 765700 c.2331T>C synonymous_variant 0.19
rpoC 765734 c.2365T>C synonymous_variant 0.28
rpoC 765739 c.2370G>C synonymous_variant 0.31
rpoC 765751 c.2382C>G synonymous_variant 0.3
rpoC 765752 p.Asp795Ser missense_variant 0.3
rpoC 765772 c.2403C>G synonymous_variant 0.28
rpoC 765784 c.2415C>G synonymous_variant 0.29
rpoC 765796 c.2427C>T synonymous_variant 0.27
rpoC 765811 c.2442T>C synonymous_variant 0.22
rpoC 765814 c.2445A>G synonymous_variant 0.24
rpoC 765826 c.2457T>C synonymous_variant 0.19
rpoC 765883 c.2514C>G synonymous_variant 0.17
rpoC 765886 c.2517C>G synonymous_variant 0.19
rpoC 765892 c.2523T>C synonymous_variant 0.23
rpoC 765928 c.2559C>G synonymous_variant 0.24
rpoC 765937 c.2568T>C synonymous_variant 0.26
rpoC 765947 c.2578T>C synonymous_variant 0.25
rpoC 765967 c.2598C>T synonymous_variant 0.24
rpoC 765979 c.2610C>G synonymous_variant 0.25
rpoC 765982 c.2613C>T synonymous_variant 0.25
rpoC 765994 c.2625A>T synonymous_variant 0.29
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.28
rpoC 766021 c.2652G>C synonymous_variant 0.27
rpoC 766027 c.2658G>C synonymous_variant 0.26
rpoC 766043 p.Gln892Glu missense_variant 0.21
rpoC 766061 p.Val898Leu missense_variant 0.16
rpoC 766081 c.2712T>C synonymous_variant 0.17
rpoC 766082 p.Ala905Gln missense_variant 0.17
rpoC 766129 c.2760C>G synonymous_variant 0.17
rpoC 766258 c.2889T>C synonymous_variant 0.21
rpoC 766273 c.2904T>C synonymous_variant 0.2
rpoC 766274 p.Ala969Thr missense_variant 0.2
rpoC 766279 c.2910C>G synonymous_variant 0.23
rpoC 766280 p.Ser971Gly missense_variant 0.24
rpoC 766300 c.2931C>G synonymous_variant 0.33
rpoC 766312 c.2943T>G synonymous_variant 0.34
rpoC 766321 c.2952C>G synonymous_variant 0.32
rpoC 766345 c.2976T>C synonymous_variant 0.29
rpoC 766348 c.2979A>G synonymous_variant 0.28
rpoC 766357 c.2988C>T synonymous_variant 0.28
rpoC 766363 c.2994G>C synonymous_variant 0.27
rpoC 766369 c.3000C>G synonymous_variant 0.28
rpoC 766381 c.3012C>T synonymous_variant 0.3
rpoC 766384 c.3015A>G synonymous_variant 0.3
rpoC 766387 c.3018C>G synonymous_variant 0.31
rpoC 766393 c.3024C>G synonymous_variant 0.3
rpoC 766402 c.3033C>G synonymous_variant 0.3
rpoC 766408 c.3039C>T synonymous_variant 0.31
rpoC 766426 c.3057C>T synonymous_variant 0.29
rpoC 766447 c.3078T>C synonymous_variant 0.24
rpoC 766456 c.3087C>G synonymous_variant 0.22
rpoC 766471 c.3102G>C synonymous_variant 0.21
rpoC 766486 c.3117A>G synonymous_variant 0.18
rpoC 766522 c.3153C>G synonymous_variant 0.15
rpoC 766528 c.3159T>C synonymous_variant 0.15
rpoC 766530 p.Arg1054Gln missense_variant 0.14
rpoC 766573 c.3204T>C synonymous_variant 0.21
rpoC 766582 c.3213C>G synonymous_variant 0.2
rpoC 766583 p.Gly1072Ser missense_variant 0.2
rpoC 766591 c.3222A>G synonymous_variant 0.21
rpoC 766594 c.3225G>C synonymous_variant 0.24
rpoC 766607 p.Ile1080Leu missense_variant 0.24
rpoC 766630 c.3261G>T synonymous_variant 0.28
rpoC 766633 c.3264G>C synonymous_variant 0.29
rpoC 766645 c.3276A>G synonymous_variant 0.34
rpoC 766651 c.3282T>G synonymous_variant 0.33
rpoC 766657 c.3288A>G synonymous_variant 0.33
rpoC 766666 c.3297C>G synonymous_variant 0.33
rpoC 766672 c.3303T>C synonymous_variant 0.32
rpoC 766708 c.3339A>G synonymous_variant 0.23
rpoC 766726 c.3357T>C synonymous_variant 0.25
rpoC 766738 c.3369G>C synonymous_variant 0.23
rpoC 766750 c.3381C>G synonymous_variant 0.21
rpoC 766765 c.3396A>C synonymous_variant 0.19
rpoC 766774 c.3405T>C synonymous_variant 0.18
rpoC 766804 c.3435A>G synonymous_variant 0.16
rpoC 766933 c.3564A>G synonymous_variant 0.15
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776039 c.2442C>G synonymous_variant 0.15
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781649 c.90T>C synonymous_variant 0.2
rpsL 781655 c.96T>C synonymous_variant 0.2
rpsL 781658 c.99A>G synonymous_variant 0.21
rpsL 781682 c.123T>C synonymous_variant 0.28
rpsL 781703 c.144G>T synonymous_variant 0.25
rpsL 781706 c.147T>G synonymous_variant 0.23
rpsL 781715 c.156T>C synonymous_variant 0.22
rpsL 781718 c.159C>G synonymous_variant 0.22
rpsL 781728 c.169T>C synonymous_variant 0.21
rpsL 781736 c.177T>C synonymous_variant 0.23
rpsL 781751 c.192G>C synonymous_variant 0.21
rpsL 781754 c.195G>C synonymous_variant 0.21
rpsL 781760 c.201T>C synonymous_variant 0.22
rpsL 781763 c.204C>G synonymous_variant 0.22
rpsL 781808 c.249C>T synonymous_variant 0.19
rpsL 781811 c.252C>T synonymous_variant 0.19
rpsL 781820 c.261G>C synonymous_variant 0.21
rpsL 781832 c.273T>C synonymous_variant 0.22
rpsL 781835 c.276T>C synonymous_variant 0.22
rpsL 781841 c.282C>G synonymous_variant 0.26
rpsL 781865 c.306G>C synonymous_variant 0.25
rpsL 781868 c.309T>C synonymous_variant 0.25
rpsL 781871 c.312G>C synonymous_variant 0.25
rpsL 781877 c.318T>G synonymous_variant 0.26
rpsL 781892 c.333A>G synonymous_variant 0.25
rpsL 781898 c.339A>T synonymous_variant 0.23
rpsL 781916 c.357T>C synonymous_variant 0.23
rpsL 781929 p.Gly124Ser missense_variant 0.21
rplC 800612 c.-197A>G upstream_gene_variant 0.23
rplC 800648 c.-161A>T upstream_gene_variant 0.23
rplC 800654 c.-155T>C upstream_gene_variant 0.22
rplC 800693 c.-116A>G upstream_gene_variant 0.15
rplC 800916 c.108A>C synonymous_variant 0.14
rplC 800937 c.129A>G synonymous_variant 0.19
rplC 800946 c.138T>C synonymous_variant 0.17
rplC 800949 c.141T>C synonymous_variant 0.16
rplC 800970 c.162T>C synonymous_variant 0.18
rplC 800985 c.177A>C synonymous_variant 0.17
rplC 801004 p.Leu66Val missense_variant 0.17
rplC 801009 c.201A>C synonymous_variant 0.15
rplC 801012 c.204T>G synonymous_variant 0.14
rplC 801174 c.366T>C synonymous_variant 0.16
rplC 801195 c.387G>C synonymous_variant 0.22
rplC 801210 c.402T>C synonymous_variant 0.21
rplC 801219 c.411C>G synonymous_variant 0.22
rplC 801231 c.423C>G synonymous_variant 0.21
rplC 801249 c.441T>C synonymous_variant 0.25
rplC 801252 c.444G>C synonymous_variant 0.27
rplC 801255 c.447C>T synonymous_variant 0.26
rplC 801267 c.459A>C synonymous_variant 0.25
rplC 801270 c.462T>C synonymous_variant 0.24
rplC 801276 c.468G>C synonymous_variant 0.26
rplC 801279 c.471G>C synonymous_variant 0.25
rplC 801285 c.477G>C synonymous_variant 0.23
rplC 801288 c.480G>C synonymous_variant 0.23
rplC 801300 c.492C>G synonymous_variant 0.19
rplC 801312 c.504G>C synonymous_variant 0.2
rplC 801324 c.516T>C synonymous_variant 0.19
rplC 801336 c.528C>G synonymous_variant 0.18
rplC 801339 c.531T>G synonymous_variant 0.17
rplC 801341 p.Leu178Gln missense_variant 0.17
rplC 801348 c.540T>G synonymous_variant 0.19
rplC 801349 p.Leu181Val missense_variant 0.19
rplC 801357 c.549T>C synonymous_variant 0.18
rplC 801366 c.558T>C synonymous_variant 0.18
rplC 801367 p.Ala187Thr missense_variant 0.18
rplC 801387 c.579G>C synonymous_variant 0.19
fbiC 1303509 c.579G>C synonymous_variant 0.16
fbiC 1303512 c.582T>C synonymous_variant 0.18
fbiC 1303521 c.591C>T synonymous_variant 0.2
fbiC 1303534 p.Ser202Ala missense_variant 0.19
fbiC 1303545 c.615A>G synonymous_variant 0.19
fbiC 1303551 c.621G>C synonymous_variant 0.19
fbiC 1303575 c.645G>C synonymous_variant 0.17
fbiC 1303584 c.654C>G synonymous_variant 0.19
fbiC 1303590 c.660A>G synonymous_variant 0.18
fbiC 1303632 c.702T>G synonymous_variant 0.15
fbiC 1304484 c.1554C>G synonymous_variant 0.16
fbiC 1304493 p.Asp521Glu missense_variant 0.15
fbiC 1304496 c.1566T>G synonymous_variant 0.16
fbiC 1304499 c.1569T>C synonymous_variant 0.18
fbiC 1304520 c.1590A>G synonymous_variant 0.26
fbiC 1304526 c.1596T>G synonymous_variant 0.24
fbiC 1304530 p.Ser534Ala missense_variant 0.22
fbiC 1304533 c.1603T>C synonymous_variant 0.23
fbiC 1304538 c.1608C>G synonymous_variant 0.23
fbiC 1304544 c.1614T>C synonymous_variant 0.23
fbiC 1304546 p.Val539Ala missense_variant 0.23
fbiC 1304559 p.Glu543Asp missense_variant 0.2
fbiC 1304565 c.1635C>G synonymous_variant 0.19
fbiC 1304568 c.1638T>C synonymous_variant 0.19
fbiC 1304580 c.1650T>C synonymous_variant 0.17
fbiC 1304604 c.1674C>T synonymous_variant 0.16
fbiC 1304727 c.1797A>G synonymous_variant 0.15
fbiC 1304742 c.1812T>G synonymous_variant 0.17
fbiC 1304748 c.1818T>C synonymous_variant 0.17
fbiC 1304751 c.1821C>G synonymous_variant 0.16
fbiC 1304784 c.1854T>C synonymous_variant 0.15
fbiC 1304787 c.1857T>C synonymous_variant 0.15
fbiC 1304811 c.1881C>G synonymous_variant 0.16
fbiC 1304817 c.1887T>C synonymous_variant 0.18
fbiC 1304826 c.1896G>C synonymous_variant 0.17
fbiC 1304829 c.1899T>C synonymous_variant 0.18
fbiC 1304832 c.1902C>G synonymous_variant 0.17
fbiC 1304856 c.1926C>G synonymous_variant 0.15
fbiC 1304916 c.1986T>C synonymous_variant 0.18
fbiC 1304928 c.1998T>C synonymous_variant 0.17
fbiC 1304931 c.2001C>G synonymous_variant 0.17
fbiC 1304937 c.2007G>C synonymous_variant 0.17
fbiC 1304940 c.2010A>G synonymous_variant 0.17
fbiC 1304955 c.2025G>A synonymous_variant 0.2
fbiC 1304958 c.2028T>G synonymous_variant 0.19
fbiC 1304991 c.2061G>A synonymous_variant 0.23
fbiC 1304994 c.2064A>G synonymous_variant 0.23
fbiC 1304995 p.Leu689Glu missense_variant 0.23
fbiC 1305006 p.Glu692Asp missense_variant 0.26
fbiC 1305015 c.2085G>C synonymous_variant 0.24
fbiC 1305021 c.2091C>A synonymous_variant 0.26
fbiC 1305033 c.2103T>G synonymous_variant 0.24
fbiC 1305042 c.2112A>G synonymous_variant 0.22
fbiC 1305045 c.2115A>G synonymous_variant 0.21
fbiC 1305066 c.2136T>C synonymous_variant 0.17
fbiC 1305069 c.2139G>C synonymous_variant 0.17
fbiC 1305075 c.2145T>C synonymous_variant 0.17
fbiC 1305252 c.2322G>A synonymous_variant 0.15
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 0.98
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 0.17
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.17
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.18
rrs 1472031 n.186G>T non_coding_transcript_exon_variant 0.18
rrs 1472033 n.188A>G non_coding_transcript_exon_variant 0.19
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.19
rrs 1472040 n.195T>C non_coding_transcript_exon_variant 0.2
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.24
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.23
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.24
rrs 1472094 n.249T>A non_coding_transcript_exon_variant 0.21
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.26
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.2
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.16
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.16
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.16
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.17
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.17
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.17
rrs 1472445 n.601_604delTCTC non_coding_transcript_exon_variant 0.2
rrs 1472451 n.606_607insCGGG non_coding_transcript_exon_variant 0.21
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.19
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 0.19
rrs 1472463 n.618G>C non_coding_transcript_exon_variant 0.21
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.21
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.18
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.17
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.16
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.15
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.24
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.3
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.14
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.3
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.28
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.36
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.38
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.43
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.41
rrl 1473899 n.242A>T non_coding_transcript_exon_variant 0.41
rrl 1473937 n.280C>T non_coding_transcript_exon_variant 0.38
rrl 1473944 n.287G>A non_coding_transcript_exon_variant 0.38
rrl 1473964 n.307T>A non_coding_transcript_exon_variant 0.39
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.3
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.3
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.26
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.23
rrl 1474051 n.394T>C non_coding_transcript_exon_variant 0.21
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.17
rrl 1474056 n.399T>C non_coding_transcript_exon_variant 0.21
rrl 1474071 n.414G>A non_coding_transcript_exon_variant 0.21
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.23
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.23
rrl 1474112 n.455T>A non_coding_transcript_exon_variant 0.24
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.35
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.31
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.3
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 0.22
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.19
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.2
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.19
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.21
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.19
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.25
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.26
rrl 1474717 n.1060A>T non_coding_transcript_exon_variant 0.45
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.44
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.45
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.39
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.41
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.35
rrl 1474952 n.1296_1300delCATCC non_coding_transcript_exon_variant 0.24
rrl 1474961 n.1304T>G non_coding_transcript_exon_variant 0.24
rrl 1474962 n.1305T>C non_coding_transcript_exon_variant 0.24
rrl 1474963 n.1306G>A non_coding_transcript_exon_variant 0.24
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.24
rrl 1474967 n.1311_1315delGGGTG non_coding_transcript_exon_variant 0.28
rrl 1474991 n.1334T>C non_coding_transcript_exon_variant 0.24
rrl 1474995 n.1338T>G non_coding_transcript_exon_variant 0.23
rrl 1475005 n.1348C>T non_coding_transcript_exon_variant 0.24
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.25
rrl 1475027 n.1370G>T non_coding_transcript_exon_variant 0.19
rrl 1475028 n.1371G>T non_coding_transcript_exon_variant 0.18
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.23
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 0.33
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.33
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.34
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.32
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.35
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.33
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.36
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.35
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.37
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.33
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.3
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.3
rrl 1475369 n.1712G>C non_coding_transcript_exon_variant 0.34
rrl 1475387 n.1730C>T non_coding_transcript_exon_variant 0.36
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.44
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.48
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.53
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.58
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.73
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.42
rrl 1475603 n.1946G>A non_coding_transcript_exon_variant 0.41
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.31
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.32
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.26
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.24
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.33
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.29
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.24
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.2
rrl 1476035 n.2378G>A non_coding_transcript_exon_variant 0.18
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.29
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.28
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.26
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.25
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.25
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.26
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.26
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.28
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.37
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.32
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.32
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.35
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.36
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.33
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.33
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.34
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.34
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.38
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 0.32
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.3
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.31
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.32
rrl 1476755 n.3098G>A non_coding_transcript_exon_variant 0.33
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 0.29
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.21
rrl 1476771 n.3114G>A non_coding_transcript_exon_variant 0.21
inhA 1673547 c.-655T>C upstream_gene_variant 0.18
inhA 1673574 c.-628C>G upstream_gene_variant 0.23
inhA 1673580 c.-622T>C upstream_gene_variant 0.25
inhA 1673583 c.-619A>C upstream_gene_variant 0.25
inhA 1673589 c.-613A>G upstream_gene_variant 0.24
inhA 1673595 c.-607A>C upstream_gene_variant 0.25
fabG1 1673596 p.Lys53Glu missense_variant 0.25
inhA 1673607 c.-595T>C upstream_gene_variant 0.29
fabG1 1673615 p.Glu59Val missense_variant 0.36
inhA 1673619 c.-583T>C upstream_gene_variant 0.33
fabG1 1673633 p.Ser65Asn missense_variant 0.19
fabG1 1673637 p.Asp66Glu missense_variant 0.18
inhA 1673646 c.-556T>C upstream_gene_variant 0.17
inhA 1673652 c.-550C>G upstream_gene_variant 0.17
inhA 1674279 c.78A>C synonymous_variant 0.15
inhA 1674280 p.Arg27Lys missense_variant 0.15
inhA 1674285 c.84A>G synonymous_variant 0.15
inhA 1674301 c.102_103delCC frameshift_variant 0.16
inhA 1674342 c.141T>C synonymous_variant 0.17
inhA 1674382 p.Leu61Ile missense_variant 0.14
inhA 1674415 p.Ala72Asn missense_variant 0.14
inhA 1674443 p.Ala81Glu missense_variant 0.14
inhA 1674450 c.249G>T synonymous_variant 0.15
inhA 1674465 c.264C>G synonymous_variant 0.16
inhA 1674471 c.270G>C synonymous_variant 0.16
inhA 1674603 c.402G>A synonymous_variant 0.15
inhA 1674639 c.438C>G synonymous_variant 0.15
inhA 1674654 c.453G>C synonymous_variant 0.15
inhA 1674660 c.459G>C synonymous_variant 0.15
inhA 1674663 c.462G>C synonymous_variant 0.15
inhA 1674669 c.468G>C synonymous_variant 0.17
inhA 1674690 c.489C>G synonymous_variant 0.16
inhA 1674703 c.502T>C synonymous_variant 0.18
inhA 1674708 c.507G>A synonymous_variant 0.2
inhA 1674718 c.517A>C synonymous_variant 0.18
inhA 1674726 c.525G>C synonymous_variant 0.18
inhA 1674729 c.528G>C synonymous_variant 0.18
inhA 1674750 c.549T>G synonymous_variant 0.18
inhA 1674759 c.558G>C synonymous_variant 0.18
inhA 1674771 c.570C>G synonymous_variant 0.18
inhA 1674774 c.573A>G synonymous_variant 0.17
inhA 1674780 c.579T>C synonymous_variant 0.15
rpsA 1833604 c.63C>T synonymous_variant 0.14
rpsA 1833610 c.69C>T synonymous_variant 0.14
rpsA 1833661 c.120A>G synonymous_variant 0.17
rpsA 1833664 c.123C>G synonymous_variant 0.16
rpsA 1833667 c.126C>G synonymous_variant 0.17
rpsA 1833721 c.180A>G synonymous_variant 0.22
rpsA 1833727 c.186G>C synonymous_variant 0.21
rpsA 1833742 c.201A>G synonymous_variant 0.19
rpsA 1833745 c.204G>C synonymous_variant 0.19
rpsA 1833754 c.213G>A synonymous_variant 0.2
rpsA 1833760 c.219C>T synonymous_variant 0.22
rpsA 1833787 c.246C>G synonymous_variant 0.27
rpsA 1833790 c.249T>C synonymous_variant 0.27
rpsA 1833793 c.252C>T synonymous_variant 0.27
rpsA 1833802 c.261A>G synonymous_variant 0.27
rpsA 1833805 c.264C>T synonymous_variant 0.26
rpsA 1833808 c.267G>C synonymous_variant 0.25
rpsA 1833811 c.270G>T synonymous_variant 0.24
rpsA 1833838 c.297G>C synonymous_variant 0.21
rpsA 1833841 c.300C>G synonymous_variant 0.21
rpsA 1833847 c.306C>G synonymous_variant 0.27
rpsA 1833856 c.315A>G synonymous_variant 0.25
rpsA 1833874 c.333T>C synonymous_variant 0.26
rpsA 1833895 c.354G>C synonymous_variant 0.27
rpsA 1833928 c.387G>C synonymous_variant 0.25
rpsA 1833940 c.399C>G synonymous_variant 0.26
rpsA 1833949 c.408T>G synonymous_variant 0.25
rpsA 1833970 c.429G>C synonymous_variant 0.22
rpsA 1833979 c.438T>C synonymous_variant 0.2
rpsA 1833991 c.450C>G synonymous_variant 0.2
rpsA 1834000 c.459G>C synonymous_variant 0.21
rpsA 1834015 c.474G>C synonymous_variant 0.19
rpsA 1834030 c.489C>G synonymous_variant 0.18
rpsA 1834150 c.609G>C synonymous_variant 0.15
rpsA 1834154 p.Asn205Gln missense_variant 0.15
rpsA 1834165 c.624A>G synonymous_variant 0.16
rpsA 1834169 p.Thr210Ala missense_variant 0.16
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 0.2
rpsA 1834192 c.651C>G synonymous_variant 0.2
rpsA 1834222 c.681T>C synonymous_variant 0.17
rpsA 1834240 c.699T>C synonymous_variant 0.16
rpsA 1834249 c.708T>C synonymous_variant 0.16
rpsA 1834303 c.762T>G synonymous_variant 0.17
rpsA 1834366 c.825A>G synonymous_variant 0.15
rpsA 1834375 c.834G>A synonymous_variant 0.16
rpsA 1834378 c.837T>C synonymous_variant 0.16
rpsA 1834411 c.870T>G synonymous_variant 0.16
rpsA 1834417 c.876G>C synonymous_variant 0.17
rpsA 1834423 c.882G>C synonymous_variant 0.18
rpsA 1834435 c.894G>C synonymous_variant 0.21
rpsA 1834451 c.910T>C synonymous_variant 0.2
rpsA 1834456 c.915T>G synonymous_variant 0.17
rpsA 1834465 c.924T>C synonymous_variant 0.2
rpsA 1834468 c.927A>G synonymous_variant 0.2
rpsA 1834489 c.948T>C synonymous_variant 0.19
rpsA 1834528 c.987T>C synonymous_variant 0.2
rpsA 1834540 c.999G>C synonymous_variant 0.2
rpsA 1834546 c.1005T>C synonymous_variant 0.2
rpsA 1834555 c.1014T>C synonymous_variant 0.22
rpsA 1834609 c.1068T>C synonymous_variant 0.27
rpsA 1834633 c.1092A>G synonymous_variant 0.29
rpsA 1834639 c.1098T>C synonymous_variant 0.26
rpsA 1834684 c.1143C>G synonymous_variant 0.26
rpsA 1834690 c.1149T>C synonymous_variant 0.32
rpsA 1834732 c.1191T>C synonymous_variant 0.23
rpsA 1834738 c.1197A>G synonymous_variant 0.23
rpsA 1834753 c.1212T>C synonymous_variant 0.2
rpsA 1834759 c.1218A>G synonymous_variant 0.2
rpsA 1834765 c.1224A>G synonymous_variant 0.16
rpsA 1834767 p.Lys409Thr missense_variant 0.16
rpsA 1834780 c.1239A>G synonymous_variant 0.15
rpsA 1834789 c.1248T>C synonymous_variant 0.15
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.4
kasA 2517950 c.-165C>G upstream_gene_variant 0.4
kasA 2517968 c.-147T>C upstream_gene_variant 0.33
kasA 2517974 c.-141T>C upstream_gene_variant 0.3
kasA 2517980 c.-135C>T upstream_gene_variant 0.29
kasA 2517989 c.-126T>C upstream_gene_variant 0.17
kasA 2517992 c.-123C>G upstream_gene_variant 0.17
kasA 2517993 c.-122G>T upstream_gene_variant 0.17
kasA 2518504 c.390T>C synonymous_variant 0.18
kasA 2518506 p.Ala131Glu missense_variant 0.19
kasA 2518513 c.399C>G synonymous_variant 0.18
kasA 2518519 c.405G>C synonymous_variant 0.17
kasA 2518528 c.414C>G synonymous_variant 0.17
kasA 2518534 c.420G>C synonymous_variant 0.18
kasA 2518561 c.447T>C synonymous_variant 0.15
kasA 2518579 c.465T>C synonymous_variant 0.15
kasA 2518588 c.474T>C synonymous_variant 0.15
kasA 2518594 c.480C>G synonymous_variant 0.16
kasA 2518597 c.483C>G synonymous_variant 0.16
kasA 2518609 p.Met165Ile missense_variant 0.18
kasA 2518639 c.525G>C synonymous_variant 0.15
kasA 2518657 c.543G>C synonymous_variant 0.16
kasA 2518663 c.549T>C synonymous_variant 0.15
kasA 2518672 c.558G>C synonymous_variant 0.16
kasA 2518678 c.564C>T synonymous_variant 0.18
kasA 2518684 c.570C>G synonymous_variant 0.18
kasA 2518702 c.588C>T synonymous_variant 0.15
kasA 2518705 c.591T>C synonymous_variant 0.15
kasA 2518711 c.597A>G synonymous_variant 0.16
kasA 2518714 c.600A>C synonymous_variant 0.15
kasA 2518783 c.669T>C synonymous_variant 0.17
kasA 2518789 c.675G>C synonymous_variant 0.16
kasA 2518792 c.678C>G synonymous_variant 0.16
kasA 2518795 c.681C>G synonymous_variant 0.16
folC 2747314 c.285A>T synonymous_variant 0.16
folC 2747317 c.282C>G synonymous_variant 0.18
folC 2747350 c.249C>T synonymous_variant 0.17
folC 2747359 c.240C>G synonymous_variant 0.15
Rv2752c 3065625 c.567G>C synonymous_variant 0.16
Rv2752c 3065634 c.558G>C synonymous_variant 0.16
Rv2752c 3065637 c.555A>G synonymous_variant 0.15
Rv2752c 3065649 c.543T>G synonymous_variant 0.17
Rv2752c 3065658 p.Pro178Leu missense_variant 0.17
Rv2752c 3065661 c.531A>C synonymous_variant 0.17
Rv2752c 3065666 c.526T>C synonymous_variant 0.17
Rv2752c 3065667 c.525A>G synonymous_variant 0.17
Rv2752c 3065675 p.Phe173Leu missense_variant 0.16
Rv2752c 3065699 p.Ile165Val missense_variant 0.16
Rv2752c 3066118 p.Asn25Ser missense_variant 0.16
Rv2752c 3066150 c.42C>T synonymous_variant 0.17
Rv2752c 3066155 p.Ser13Thr missense_variant 0.18
Rv2752c 3066168 c.24A>C synonymous_variant 0.19
Rv2752c 3066171 c.21G>T synonymous_variant 0.19
Rv2752c 3066176 p.Pro6Ala missense_variant 0.19
Rv2752c 3066177 c.15T>C synonymous_variant 0.19
Rv2752c 3066194 c.-3G>T upstream_gene_variant 0.18
Rv2752c 3066195 c.-4A>G upstream_gene_variant 0.15
thyX 3067553 c.393C>T synonymous_variant 0.21
thyX 3067556 p.His130Arg missense_variant 0.21
thyX 3067559 c.387C>G synonymous_variant 0.21
thyX 3067564 p.Leu128Val missense_variant 0.21
thyX 3067570 p.Ala126Pro missense_variant 0.22
thyX 3067586 c.360C>A synonymous_variant 0.24
thyX 3067601 c.345G>C synonymous_variant 0.22
thyX 3067607 c.339C>T synonymous_variant 0.27
thyX 3067610 p.Lys112Gly missense_variant 0.23
thyX 3067619 c.327A>G synonymous_variant 0.24
thyX 3067622 c.324C>T synonymous_variant 0.27
thyX 3067634 c.312C>G synonymous_variant 0.28
thyX 3067661 c.285C>G synonymous_variant 0.21
thyA 3073959 c.513T>C synonymous_variant 0.2
thyA 3073977 c.495A>G synonymous_variant 0.24
thyA 3073980 c.492C>T synonymous_variant 0.24
thyA 3073983 c.489C>G synonymous_variant 0.25
thyA 3073989 c.483T>C synonymous_variant 0.25
thyA 3074004 c.468T>C synonymous_variant 0.25
thyA 3074010 c.462C>G synonymous_variant 0.25
thyA 3074031 c.441T>C synonymous_variant 0.23
thyA 3074037 c.435C>G synonymous_variant 0.22
thyA 3074047 p.Ala142Val missense_variant 0.21
thyA 3074053 p.Arg140Gln missense_variant 0.19
thyA 3074056 p.Glu139Pro missense_variant 0.18
thyA 3074061 c.411A>G synonymous_variant 0.2
thyA 3074064 c.408C>G synonymous_variant 0.19
thyA 3074076 c.396C>G synonymous_variant 0.17
thyA 3074082 c.390G>C synonymous_variant 0.17
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
fbiB 3641199 c.-336C>T upstream_gene_variant 0.17
fbiA 3641200 p.Ile220Val missense_variant 0.17
fbiB 3641217 c.-318C>G upstream_gene_variant 0.2
fbiB 3641226 c.-309G>C upstream_gene_variant 0.2
fbiB 3641232 c.-303C>G upstream_gene_variant 0.2
fbiB 3641235 c.-300G>C upstream_gene_variant 0.2
fbiB 3641239 c.-296T>C upstream_gene_variant 0.2
fbiB 3641244 c.-291G>C upstream_gene_variant 0.21
fbiA 3641245 p.Glu235Ser missense_variant 0.23
fbiB 3641250 c.-285A>G upstream_gene_variant 0.22
fbiB 3641256 c.-279A>G upstream_gene_variant 0.23
fbiA 3641260 p.Ile240Val missense_variant 0.24
fbiB 3641286 c.-249C>T upstream_gene_variant 0.25
fbiA 3641288 p.Glu249Gly missense_variant 0.25
fbiB 3641292 c.-243G>A upstream_gene_variant 0.23
fbiB 3641295 c.-240G>C upstream_gene_variant 0.23
fbiA 3641314 p.Thr258Ala missense_variant 0.22
fbiB 3641322 c.-213T>G upstream_gene_variant 0.2
fbiB 3641328 c.-207T>G upstream_gene_variant 0.18
fbiB 3642593 c.1059G>C synonymous_variant 0.15
fbiB 3642602 c.1068A>C synonymous_variant 0.15
fbiB 3642620 c.1086T>C synonymous_variant 0.15
fbiB 3642633 p.Asp367Arg missense_variant 0.16
fbiB 3642668 c.1134A>G synonymous_variant 0.15
rpoA 3877533 c.975C>G synonymous_variant 0.2
rpoA 3877545 c.963G>C synonymous_variant 0.18
rpoA 3877553 p.Glu319Gln missense_variant 0.16
rpoA 3877557 c.951C>G synonymous_variant 0.16
rpoA 3877587 c.921A>G synonymous_variant 0.2
rpoA 3877613 p.Ile299Val missense_variant 0.23
rpoA 3877656 c.852T>C synonymous_variant 0.2
rpoA 3877668 c.840A>G synonymous_variant 0.2
rpoA 3877677 p.Ala277Ser missense_variant 0.18
rpoA 3877680 c.828G>C synonymous_variant 0.18
rpoA 3877686 c.822A>G synonymous_variant 0.17
rpoA 3877692 c.816G>C synonymous_variant 0.16
rpoA 3877695 c.813C>G synonymous_variant 0.16
rpoA 3877704 c.804G>C synonymous_variant 0.2
rpoA 3877728 c.780C>G synonymous_variant 0.15
rpoA 3877743 c.765T>C synonymous_variant 0.15
rpoA 3877746 c.762G>T synonymous_variant 0.15
rpoA 3877803 c.705G>C synonymous_variant 0.16
rpoA 3877875 c.633T>C synonymous_variant 0.16
rpoA 3877899 p.Ser203Thr missense_variant 0.18
rpoA 3877905 c.603A>G synonymous_variant 0.18
rpoA 3877908 p.Asn200Ser missense_variant 0.18
rpoA 3877920 c.588G>C synonymous_variant 0.23
rpoA 3877962 c.546G>T synonymous_variant 0.19
rpoA 3877968 c.540C>G synonymous_variant 0.22
rpoA 3877974 c.534G>C synonymous_variant 0.22
rpoA 3877989 c.519A>G synonymous_variant 0.26
rpoA 3878001 c.507A>G synonymous_variant 0.23
rpoA 3878019 c.489A>G synonymous_variant 0.22
rpoA 3878022 c.486T>C synonymous_variant 0.22
rpoA 3878031 c.477T>C synonymous_variant 0.23
rpoA 3878040 c.468T>C synonymous_variant 0.22
rpoA 3878043 c.465G>C synonymous_variant 0.21
rpoA 3878046 c.462T>A synonymous_variant 0.23
rpoA 3878055 c.453A>G synonymous_variant 0.24
rpoA 3878067 c.441C>T synonymous_variant 0.2
rpoA 3878070 c.438T>C synonymous_variant 0.2
rpoA 3878073 c.435C>T synonymous_variant 0.22
rpoA 3878082 c.426T>G synonymous_variant 0.27
rpoA 3878103 c.405A>G synonymous_variant 0.26
rpoA 3878106 c.402G>C synonymous_variant 0.29
rpoA 3878118 c.390T>C synonymous_variant 0.28
rpoA 3878130 c.378C>G synonymous_variant 0.26
rpoA 3878142 p.Gly122Glu missense_variant 0.22
rpoA 3878157 c.351C>G synonymous_variant 0.24
rpoA 3878163 c.345C>T synonymous_variant 0.25
rpoA 3878169 c.339G>C synonymous_variant 0.23
rpoA 3878184 c.324C>T synonymous_variant 0.24
rpoA 3878193 c.315T>C synonymous_variant 0.23
rpoA 3878197 p.Glu104Ala missense_variant 0.2
rpoA 3878199 c.309T>C synonymous_variant 0.2
rpoA 3878205 c.303T>C synonymous_variant 0.22
rpoA 3878217 c.291A>G synonymous_variant 0.23
rpoA 3878264 p.Ser82Gly missense_variant 0.15
rpoA 3878284 p.Glu75Ala missense_variant 0.16
rpoA 3878292 c.216T>C synonymous_variant 0.15
rpoA 3878331 c.177A>G synonymous_variant 0.14
rpoA 3878346 c.162T>C synonymous_variant 0.15
rpoA 3878367 c.141C>G synonymous_variant 0.15
rpoA 3878370 c.138T>C synonymous_variant 0.15
clpC1 4038299 c.2406C>A synonymous_variant 0.15
clpC1 4038314 c.2391T>A synonymous_variant 0.14
clpC1 4038486 p.Gly740Asn missense_variant 0.15
clpC1 4038498 p.Ser736Thr missense_variant 0.16
clpC1 4038530 p.Glu725Asp missense_variant 0.17
clpC1 4038533 p.Arg724Lys missense_variant 0.17
clpC1 4038596 c.2109A>G synonymous_variant 0.19
clpC1 4038623 c.2082A>G synonymous_variant 0.16
clpC1 4038640 p.Asp689Asn missense_variant 0.18
clpC1 4038658 p.Lys683Gln missense_variant 0.17
clpC1 4038661 p.Ser682Thr missense_variant 0.17
clpC1 4038662 c.2043T>C synonymous_variant 0.17
clpC1 4038683 c.2022T>C synonymous_variant 0.22
clpC1 4038695 c.2010C>G synonymous_variant 0.21
clpC1 4038698 c.2007C>T synonymous_variant 0.2
clpC1 4038701 c.2004G>C synonymous_variant 0.2
clpC1 4038704 c.2001T>C synonymous_variant 0.2
clpC1 4038707 c.1998C>G synonymous_variant 0.2
clpC1 4038710 c.1995G>C synonymous_variant 0.2
clpC1 4038713 c.1992T>C synonymous_variant 0.22
clpC1 4038755 c.1950G>C synonymous_variant 0.17
clpC1 4038773 c.1932T>C synonymous_variant 0.16
clpC1 4038790 c.1915C>T synonymous_variant 0.16
clpC1 4038812 c.1893T>C synonymous_variant 0.17
clpC1 4038878 c.1827A>G synonymous_variant 0.23
clpC1 4038884 c.1821C>T synonymous_variant 0.23
clpC1 4038908 c.1797C>G synonymous_variant 0.24
clpC1 4038914 c.1791G>C synonymous_variant 0.24
clpC1 4038923 c.1782A>G synonymous_variant 0.25
clpC1 4038953 c.1752A>G synonymous_variant 0.26
clpC1 4038956 c.1749T>C synonymous_variant 0.24
clpC1 4038965 c.1740T>C synonymous_variant 0.23
clpC1 4038971 c.1734T>C synonymous_variant 0.22
clpC1 4038974 c.1731T>C synonymous_variant 0.24
clpC1 4038989 c.1716T>C synonymous_variant 0.25
clpC1 4038997 c.1708T>C synonymous_variant 0.25
clpC1 4039022 c.1683A>G synonymous_variant 0.24
clpC1 4039043 c.1662G>C synonymous_variant 0.22
clpC1 4039064 c.1641C>T synonymous_variant 0.2
clpC1 4039085 c.1620A>G synonymous_variant 0.23
clpC1 4039090 c.1615C>T synonymous_variant 0.22
clpC1 4039097 c.1608G>C synonymous_variant 0.23
clpC1 4039100 c.1605C>G synonymous_variant 0.21
clpC1 4039103 c.1602T>C synonymous_variant 0.2
clpC1 4039106 c.1599G>C synonymous_variant 0.21
clpC1 4039112 c.1593C>G synonymous_variant 0.22
clpC1 4039121 c.1584T>C synonymous_variant 0.22
clpC1 4039133 c.1572C>G synonymous_variant 0.17
clpC1 4039142 c.1563A>G synonymous_variant 0.21
clpC1 4039145 c.1560G>C synonymous_variant 0.21
clpC1 4039166 c.1539G>A synonymous_variant 0.18
clpC1 4039169 p.Glu512Asp missense_variant 0.18
clpC1 4039172 c.1533A>G synonymous_variant 0.19
clpC1 4039178 c.1527G>C synonymous_variant 0.16
clpC1 4039183 c.1522T>C synonymous_variant 0.16
clpC1 4039187 c.1518G>C synonymous_variant 0.18
clpC1 4039190 c.1515C>G synonymous_variant 0.17
clpC1 4039208 c.1497C>G synonymous_variant 0.2
clpC1 4039226 c.1479T>C synonymous_variant 0.2
clpC1 4039274 c.1431G>C synonymous_variant 0.2
clpC1 4039292 c.1413C>T synonymous_variant 0.13
clpC1 4039328 c.1377A>C synonymous_variant 0.16
clpC1 4039382 c.1323C>G synonymous_variant 0.15
clpC1 4039391 c.1314T>G synonymous_variant 0.15
clpC1 4039394 c.1311G>C synonymous_variant 0.15
clpC1 4039397 c.1308A>G synonymous_variant 0.18
clpC1 4039409 c.1296T>C synonymous_variant 0.21
clpC1 4039412 c.1293T>G synonymous_variant 0.21
clpC1 4039415 p.Glu430Asp missense_variant 0.21
clpC1 4039430 c.1275T>C synonymous_variant 0.17
clpC1 4039442 c.1263A>G synonymous_variant 0.18
clpC1 4039454 c.1251A>G synonymous_variant 0.18
clpC1 4039466 c.1239T>C synonymous_variant 0.24
clpC1 4039469 c.1236T>C synonymous_variant 0.24
clpC1 4039481 c.1224T>G synonymous_variant 0.19
clpC1 4039484 c.1221T>C synonymous_variant 0.22
clpC1 4039517 c.1188C>G synonymous_variant 0.26
clpC1 4039556 c.1149G>C synonymous_variant 0.22
clpC1 4039570 p.Met379Leu missense_variant 0.24
clpC1 4039582 p.Thr375Ser missense_variant 0.26
clpC1 4039610 c.1095G>C synonymous_variant 0.18
clpC1 4039622 c.1083C>G synonymous_variant 0.2
clpC1 4039733 c.972G>C synonymous_variant 0.14
clpC1 4039850 c.855T>C synonymous_variant 0.16
clpC1 4039930 p.Ser259Cys missense_variant 0.14
clpC1 4039934 c.771G>C synonymous_variant 0.16
clpC1 4039946 c.759A>C synonymous_variant 0.19
clpC1 4039949 c.756G>C synonymous_variant 0.19
clpC1 4039952 c.753T>C synonymous_variant 0.18
clpC1 4039979 c.726C>G synonymous_variant 0.2
clpC1 4039988 c.717C>G synonymous_variant 0.21
clpC1 4039996 p.Glu237Gln missense_variant 0.16
clpC1 4040033 c.672G>C synonymous_variant 0.19
clpC1 4040108 c.597G>C synonymous_variant 0.16
clpC1 4040129 c.576C>G synonymous_variant 0.16
clpC1 4040144 c.561G>C synonymous_variant 0.16
clpC1 4040147 c.558A>G synonymous_variant 0.17
clpC1 4040162 c.543G>C synonymous_variant 0.19
clpC1 4040165 c.540G>C synonymous_variant 0.19
clpC1 4040171 c.534C>G synonymous_variant 0.21
clpC1 4040180 c.525C>G synonymous_variant 0.18
clpC1 4040201 c.504C>G synonymous_variant 0.17
clpC1 4040207 c.498T>C synonymous_variant 0.17
clpC1 4040213 c.492T>G synonymous_variant 0.2
clpC1 4040228 c.477G>C synonymous_variant 0.27
clpC1 4040231 c.474C>G synonymous_variant 0.27
clpC1 4040234 c.471C>G synonymous_variant 0.27
clpC1 4040240 c.465C>G synonymous_variant 0.26
clpC1 4040249 c.456A>G synonymous_variant 0.23
clpC1 4040267 c.438A>G synonymous_variant 0.2
clpC1 4040273 c.432T>C synonymous_variant 0.2
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.2
clpC1 4040279 c.426C>G synonymous_variant 0.21
clpC1 4040291 c.414G>C synonymous_variant 0.24
clpC1 4040330 c.375C>G synonymous_variant 0.28
clpC1 4040335 c.370C>T synonymous_variant 0.28
clpC1 4040354 c.351A>G synonymous_variant 0.27
clpC1 4040363 c.342A>C synonymous_variant 0.25
clpC1 4040372 c.333C>G synonymous_variant 0.25
clpC1 4040375 c.330G>C synonymous_variant 0.2
clpC1 4040380 c.325T>C synonymous_variant 0.19
clpC1 4040381 c.324T>C synonymous_variant 0.19
clpC1 4040387 c.318A>G synonymous_variant 0.19
clpC1 4040393 c.312G>C synonymous_variant 0.2
clpC1 4040411 c.294T>C synonymous_variant 0.24
clpC1 4040423 c.282A>G synonymous_variant 0.21
clpC1 4040431 c.274T>C synonymous_variant 0.16
clpC1 4040441 c.264C>G synonymous_variant 0.15
panD 4044072 c.210C>A synonymous_variant 0.13
panD 4044138 c.144T>C synonymous_variant 0.17
panD 4044150 c.132A>G synonymous_variant 0.16
panD 4044156 c.126A>G synonymous_variant 0.16
embC 4240543 c.681G>C synonymous_variant 0.16
embC 4240545 p.Pro228Gln missense_variant 0.17
embC 4240558 c.696C>G synonymous_variant 0.19
embC 4240561 c.699C>G synonymous_variant 0.18
embC 4240576 c.714A>G synonymous_variant 0.2
embC 4240578 p.Ala239Val missense_variant 0.21
embC 4240587 p.Gly242Ala missense_variant 0.26
embC 4240598 p.Val246Ile missense_variant 0.23
embC 4240610 p.Ile250Leu missense_variant 0.24
embC 4240615 c.753G>C synonymous_variant 0.24
embC 4240632 p.Met257Thr missense_variant 0.15
embC 4240645 c.783G>C synonymous_variant 0.15
embC 4240654 c.792C>G synonymous_variant 0.14
embC 4240655 p.Ala265Ser missense_variant 0.14
embC 4241104 c.1242G>A synonymous_variant 0.15
embC 4241107 c.1245G>C synonymous_variant 0.15
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242823 c.-410G>C upstream_gene_variant 0.14
embA 4242826 c.-407G>C upstream_gene_variant 0.14
embA 4242832 c.-401A>C upstream_gene_variant 0.17
embA 4242838 c.-395C>G upstream_gene_variant 0.16
embA 4242844 c.-389A>G upstream_gene_variant 0.15
embA 4242847 c.-386C>G upstream_gene_variant 0.15
embA 4242859 c.-374C>T upstream_gene_variant 0.16
embA 4242862 c.-371A>G upstream_gene_variant 0.16
embC 4242863 p.Tyr1001Asn missense_variant 0.16
embA 4242892 c.-341G>C upstream_gene_variant 0.15
embA 4242907 c.-326G>T upstream_gene_variant 0.16
embA 4242928 c.-305A>C upstream_gene_variant 0.15
embC 4242941 p.His1027Asn missense_variant 0.14
embA 4243460 c.228C>T synonymous_variant 1.0
embB 4248001 c.1488C>T synonymous_variant 0.19
embB 4248007 c.1494C>G synonymous_variant 0.19
embB 4248019 c.1506G>C synonymous_variant 0.19
embB 4248025 c.1512A>G synonymous_variant 0.2
embB 4248035 p.Val508Ile missense_variant 0.16
embB 4248040 c.1527C>G synonymous_variant 0.16
embB 4248041 p.Ala510Thr missense_variant 0.16
embB 4248044 p.Lys511Glu missense_variant 0.16
embB 4248055 c.1542G>C synonymous_variant 0.17
embB 4248064 c.1551G>C synonymous_variant 0.17
embB 4248070 c.1557T>C synonymous_variant 0.19
embB 4248085 c.1572T>C synonymous_variant 0.22
embB 4248097 c.1584C>G synonymous_variant 0.23
embB 4248118 c.1605T>C synonymous_variant 0.2
embB 4248124 c.1611G>C synonymous_variant 0.2
embB 4248130 c.1617G>C synonymous_variant 0.19
embB 4248146 p.Ile545Val missense_variant 0.19
embB 4248154 c.1641G>C synonymous_variant 0.16
embB 4248157 c.1644A>G synonymous_variant 0.15
embB 4248163 c.1650G>C synonymous_variant 0.16
embB 4248169 c.1656C>G synonymous_variant 0.16
embB 4248173 p.Val554Leu missense_variant 0.16
embB 4248206 p.Ser565Gly missense_variant 0.17
embB 4248214 c.1701C>G synonymous_variant 0.15
embB 4249447 c.2934G>C synonymous_variant 0.15
embB 4249450 c.2937C>T synonymous_variant 0.17
embB 4249456 c.2943G>A synonymous_variant 0.17
embB 4249465 c.2952G>C synonymous_variant 0.15
embB 4249469 p.Leu986Met missense_variant 0.15
aftB 4267647 p.Asp397Gly missense_variant 1.0
aftB 4269207 c.-371G>C upstream_gene_variant 0.15
ethA 4326676 p.Ser266Arg missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0