lineage | Count |
---|---|
lineage4.9 | 44 |
lineage4.3.4.2.1 | 1 |
lineage4 | 2 |
lineage3 | 2 |
lineage4.1.2.1 | 3 |
La3;lineage4.9 | 7 |
La1.7;lineage4.9 | 1 |
lineage2.2.1 | 5 |
lineage4.3.4.1 | 2 |
lineage4.1;lineage4.9 | 1 |
lineage4.8 | 3 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
lineage4.5 | 1 |
lineage4.6.1.1 | 1 |
1 | |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.9.1 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | ERR373945 | Sensitive | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR473332 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR7535086 | Other | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR245758 | Other | lineage4.9.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None |
---|