Run ID: ERR2513229
Sample name:
Date: 31-03-2023 19:32:28
Number of reads: 507029
Percentage reads mapped: 44.52
Strain: lineage2.2.1
Drug-resistance: MDR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage2 | East-Asian | Beijing | RD105 | 0.98 |
lineage2.2 | East-Asian (Beijing) | Beijing-RD207 | RD105;RD207 | 1.0 |
lineage2.2.1 | East-Asian (Beijing) | Beijing-RD181 | RD105;RD207;RD181 | 0.99 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761155 | p.Ser450Leu | missense_variant | 0.47 | rifampicin |
rpoC | 764841 | p.Ile491Thr | missense_variant | 0.54 | rifampicin |
rpsL | 781687 | p.Lys43Arg | missense_variant | 0.88 | streptomycin |
fabG1 | 1673432 | c.-8T>C | upstream_gene_variant | 1.0 | isoniazid, ethionamide |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid |
katG | 2155694 | p.Ser140Gly | missense_variant | 0.46 | isoniazid |
pncA | 2288697 | p.Leu182Ser | missense_variant | 0.18 | pyrazinamide |
pncA | 2289040 | p.Trp68Gly | missense_variant | 1.0 | pyrazinamide |
embB | 4247431 | p.Met306Ile | missense_variant | 1.0 | ethambutol |
ethA | 4326087 | c.1386delA | frameshift_variant | 1.0 | ethionamide, ethionamide |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 5440 | c.201A>G | synonymous_variant | 0.18 |
gyrB | 5727 | p.Pro163Leu | missense_variant | 0.2 |
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.16 |
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 0.17 |
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.17 |
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 0.15 |
gyrA | 6715 | c.-587C>G | upstream_gene_variant | 0.15 |
gyrA | 6724 | c.-578G>C | upstream_gene_variant | 0.15 |
gyrA | 6730 | c.-572A>G | upstream_gene_variant | 0.14 |
gyrA | 6745 | c.-557T>G | upstream_gene_variant | 0.14 |
gyrB | 6749 | p.Ala504Ser | missense_variant | 0.15 |
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.15 |
gyrB | 6764 | p.Leu509Phe | missense_variant | 0.15 |
gyrA | 6769 | c.-533C>T | upstream_gene_variant | 0.14 |
gyrA | 6775 | c.-527G>A | upstream_gene_variant | 0.14 |
gyrA | 6793 | c.-509T>C | upstream_gene_variant | 0.14 |
gyrB | 6798 | p.Gly520Ala | missense_variant | 0.15 |
gyrA | 6803 | c.-499C>T | upstream_gene_variant | 0.15 |
gyrA | 7334 | c.33G>A | synonymous_variant | 0.13 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 7812 | p.Pro171Thr | missense_variant | 0.17 |
gyrA | 8783 | c.1482G>C | synonymous_variant | 0.17 |
gyrA | 8786 | c.1485T>C | synonymous_variant | 0.19 |
gyrA | 8792 | c.1491G>C | synonymous_variant | 0.19 |
gyrA | 8807 | p.Asp502Glu | missense_variant | 0.19 |
gyrA | 8810 | c.1509A>C | synonymous_variant | 0.19 |
gyrA | 8816 | c.1515C>G | synonymous_variant | 0.19 |
gyrA | 8818 | p.Ser506Asn | missense_variant | 0.19 |
gyrA | 8829 | c.1528_1530delTTGinsCTC | synonymous_variant | 0.19 |
gyrA | 8837 | c.1536C>G | synonymous_variant | 0.23 |
gyrA | 8849 | c.1548C>G | synonymous_variant | 0.23 |
gyrA | 8852 | c.1551T>C | synonymous_variant | 0.23 |
gyrA | 8858 | c.1557T>G | synonymous_variant | 0.24 |
gyrA | 8867 | c.1566A>G | synonymous_variant | 0.21 |
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.21 |
gyrA | 8873 | c.1572A>C | synonymous_variant | 0.2 |
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.25 |
gyrA | 8900 | c.1599G>C | synonymous_variant | 0.25 |
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.25 |
gyrA | 8915 | c.1614A>G | synonymous_variant | 0.3 |
gyrA | 8930 | c.1629C>T | synonymous_variant | 0.22 |
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.21 |
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.21 |
gyrA | 8945 | c.1644G>T | synonymous_variant | 0.21 |
gyrA | 8946 | c.1645T>C | synonymous_variant | 0.24 |
gyrA | 8969 | c.1668G>C | synonymous_variant | 0.21 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
mshA | 575907 | p.Ala187Val | missense_variant | 1.0 |
ccsA | 620040 | c.150G>C | synonymous_variant | 0.14 |
ccsA | 620182 | p.Arg98Cys | missense_variant | 0.17 |
ccsA | 620200 | p.Arg104Trp | missense_variant | 0.18 |
ccsA | 620625 | p.Ile245Met | missense_variant | 1.0 |
rpoB | 760157 | c.351A>G | synonymous_variant | 0.18 |
rpoB | 760172 | c.366G>C | synonymous_variant | 0.21 |
rpoB | 760176 | p.Ala124Ser | missense_variant | 0.26 |
rpoB | 760181 | c.375T>G | synonymous_variant | 0.26 |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.3 |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.27 |
rpoB | 760233 | c.427_429delAGTinsTCG | synonymous_variant | 0.25 |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.26 |
rpoB | 760253 | c.447T>C | synonymous_variant | 0.23 |
rpoB | 760256 | p.Asp150Glu | missense_variant | 0.23 |
rpoB | 760274 | p.Glu156Asp | missense_variant | 0.3 |
rpoB | 760282 | p.Thr159Ser | missense_variant | 0.32 |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.27 |
rpoB | 760307 | c.501T>C | synonymous_variant | 0.23 |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.21 |
rpoB | 760313 | c.507G>C | synonymous_variant | 0.19 |
rpoB | 760325 | c.519G>C | synonymous_variant | 0.22 |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.23 |
rpoB | 760330 | c.525_526delGT | frameshift_variant | 0.23 |
rpoB | 760340 | c.534_535insC | frameshift_variant | 0.23 |
rpoB | 760343 | c.537G>C | synonymous_variant | 0.29 |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.33 |
rpoB | 760368 | p.Ser188Ala | missense_variant | 0.35 |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.32 |
rpoB | 760382 | c.576G>C | synonymous_variant | 0.33 |
rpoB | 760389 | p.Ser195Ala | missense_variant | 0.35 |
rpoB | 760415 | c.609C>T | synonymous_variant | 0.39 |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.3 |
rpoB | 760434 | p.Val210Ile | missense_variant | 0.3 |
rpoB | 760460 | c.654G>C | synonymous_variant | 0.4 |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.44 |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.4 |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.38 |
rpoB | 760502 | c.696C>G | synonymous_variant | 0.41 |
rpoB | 760503 | p.Lys233Gln | missense_variant | 0.41 |
rpoB | 760515 | p.Trp237Val | missense_variant | 0.39 |
rpoB | 760521 | p.Ser239Arg | missense_variant | 0.4 |
rpoB | 760527 | p.Gln241Glu | missense_variant | 0.4 |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.35 |
rpoB | 760534 | p.Val243Ala | missense_variant | 0.35 |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.33 |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.27 |
rpoB | 760571 | c.765G>C | synonymous_variant | 0.25 |
rpoB | 760584 | p.Asn260His | missense_variant | 0.19 |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.17 |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.16 |
rpoB | 760934 | c.1128C>G | synonymous_variant | 0.16 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.16 |
rpoB | 760959 | p.Val385Leu | missense_variant | 0.16 |
rpoB | 760964 | c.1158C>T | synonymous_variant | 0.17 |
rpoB | 760965 | p.Met387Leu | missense_variant | 0.17 |
rpoB | 760973 | c.1167G>T | synonymous_variant | 0.38 |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.43 |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.43 |
rpoB | 760991 | c.1185G>T | synonymous_variant | 0.44 |
rpoB | 761014 | p.Val403Ala | missense_variant | 0.48 |
rpoB | 761027 | c.1221A>C | synonymous_variant | 0.52 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.45 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.44 |
rpoB | 761051 | c.1245G>T | synonymous_variant | 0.36 |
rpoB | 761054 | c.1248G>C | synonymous_variant | 0.36 |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.36 |
rpoB | 761060 | c.1254C>G | synonymous_variant | 0.37 |
rpoB | 761063 | c.1257C>G | synonymous_variant | 0.37 |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.43 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.43 |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.44 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.42 |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.52 |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.52 |
rpoB | 761168 | c.1362C>G | synonymous_variant | 0.52 |
rpoB | 761178 | c.1372_1374delTCAinsAGT | synonymous_variant | 0.52 |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.59 |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.59 |
rpoB | 761198 | c.1392G>C | synonymous_variant | 0.59 |
rpoB | 761204 | c.1398C>G | synonymous_variant | 0.61 |
rpoB | 761234 | c.1428G>C | synonymous_variant | 0.62 |
rpoB | 761243 | c.1437G>C | synonymous_variant | 0.6 |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.6 |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.57 |
rpoB | 761258 | c.1452G>A | synonymous_variant | 0.54 |
rpoB | 761261 | c.1455G>C | synonymous_variant | 0.47 |
rpoB | 761264 | c.1458C>G | synonymous_variant | 0.44 |
rpoB | 761273 | c.1467T>C | synonymous_variant | 0.44 |
rpoB | 761282 | c.1476C>T | synonymous_variant | 0.4 |
rpoB | 761288 | c.1482G>C | synonymous_variant | 0.31 |
rpoB | 761300 | c.1494G>A | synonymous_variant | 0.17 |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.22 |
rpoB | 761555 | c.1749G>C | synonymous_variant | 0.25 |
rpoB | 761558 | c.1752C>G | synonymous_variant | 0.25 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.27 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.27 |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.27 |
rpoB | 761600 | c.1794T>C | synonymous_variant | 0.29 |
rpoB | 761603 | c.1797C>G | synonymous_variant | 0.31 |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.31 |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.36 |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.38 |
rpoB | 761627 | c.1821C>T | synonymous_variant | 0.36 |
rpoB | 761633 | c.1827G>C | synonymous_variant | 0.38 |
rpoB | 761649 | c.1843_1844delAGinsTC | synonymous_variant | 0.5 |
rpoB | 761655 | p.Ala617Ser | missense_variant | 0.5 |
rpoB | 761666 | c.1860G>C | synonymous_variant | 0.5 |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.4 |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.22 |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.22 |
rpoB | 762000 | c.2194_2195delTCinsAG | synonymous_variant | 0.33 |
rpoB | 762003 | p.Asn733Gln | missense_variant | 0.35 |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.32 |
rpoB | 762011 | c.2205G>C | synonymous_variant | 0.3 |
rpoB | 762014 | c.2208C>G | synonymous_variant | 0.3 |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.3 |
rpoB | 762024 | p.Val740Thr | missense_variant | 0.3 |
rpoB | 762051 | p.His749Tyr | missense_variant | 0.42 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.5 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.4 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.4 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.47 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.48 |
rpoB | 762137 | c.2331C>T | synonymous_variant | 0.57 |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.57 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.54 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.54 |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.65 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.62 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.61 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.58 |
rpoB | 762209 | c.2403C>G | synonymous_variant | 0.55 |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.53 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.44 |
rpoB | 762251 | c.2445G>C | synonymous_variant | 0.2 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.2 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.18 |
rpoB | 762275 | c.2469C>G | synonymous_variant | 0.17 |
rpoB | 762858 | p.Thr1018Ser | missense_variant | 0.2 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.28 |
rpoB | 762881 | p.Met1025Ile | missense_variant | 0.42 |
rpoC | 762899 | c.-471G>C | upstream_gene_variant | 0.48 |
rpoC | 762917 | c.-453C>G | upstream_gene_variant | 0.48 |
rpoC | 762920 | c.-450C>T | upstream_gene_variant | 0.5 |
rpoC | 762923 | c.-447C>G | upstream_gene_variant | 0.52 |
rpoC | 762929 | c.-441G>A | upstream_gene_variant | 0.52 |
rpoC | 762959 | c.-411G>C | upstream_gene_variant | 0.53 |
rpoC | 762971 | c.-399G>C | upstream_gene_variant | 0.53 |
rpoC | 762980 | c.-390T>C | upstream_gene_variant | 0.52 |
rpoC | 762989 | c.-381G>T | upstream_gene_variant | 0.54 |
rpoC | 762995 | c.-375G>T | upstream_gene_variant | 0.55 |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 1.0 |
rpoC | 763034 | c.-336C>G | upstream_gene_variant | 0.64 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.67 |
rpoC | 763050 | c.-320C>T | upstream_gene_variant | 0.66 |
rpoC | 763067 | c.-303C>G | upstream_gene_variant | 0.67 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.66 |
rpoB | 763074 | p.Thr1090Val | missense_variant | 0.65 |
rpoC | 763085 | c.-285C>T | upstream_gene_variant | 0.63 |
rpoC | 763088 | c.-282C>G | upstream_gene_variant | 0.63 |
rpoC | 763094 | c.-276G>C | upstream_gene_variant | 0.63 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.68 |
rpoC | 763139 | c.-231C>T | upstream_gene_variant | 0.77 |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.78 |
rpoC | 763160 | c.-210G>A | upstream_gene_variant | 0.85 |
rpoC | 763166 | c.-204A>G | upstream_gene_variant | 0.8 |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 0.89 |
rpoC | 763172 | c.-198G>C | upstream_gene_variant | 0.88 |
rpoC | 763181 | c.-189G>C | upstream_gene_variant | 0.6 |
rpoC | 763187 | c.-183C>G | upstream_gene_variant | 0.6 |
rpoC | 763193 | c.-177C>G | upstream_gene_variant | 0.5 |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.13 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.33 |
rpoC | 763465 | c.96G>A | synonymous_variant | 0.4 |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.4 |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.4 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.65 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.56 |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.68 |
rpoC | 763606 | c.237C>T | synonymous_variant | 0.58 |
rpoC | 763619 | p.Arg84Lys | missense_variant | 0.55 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.5 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.55 |
rpoC | 763660 | c.291T>C | synonymous_variant | 0.33 |
rpoC | 763666 | c.297G>T | synonymous_variant | 0.31 |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.31 |
rpoC | 763687 | c.318C>T | synonymous_variant | 0.17 |
rpoC | 763754 | p.Ile129Val | missense_variant | 0.15 |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.17 |
rpoC | 764103 | p.Val245Glu | missense_variant | 0.17 |
rpoC | 764112 | p.Tyr248Phe | missense_variant | 0.17 |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.14 |
rpoC | 764143 | c.774G>C | synonymous_variant | 0.17 |
rpoC | 764147 | p.Ser260Ala | missense_variant | 0.17 |
rpoC | 764153 | p.Gln262Lys | missense_variant | 0.17 |
rpoC | 764156 | p.Lys263Arg | missense_variant | 0.15 |
rpoC | 764168 | p.Asn267Asp | missense_variant | 0.15 |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.15 |
rpoC | 764208 | p.Val280Ala | missense_variant | 0.13 |
rpoC | 764217 | p.Asn283Thr | missense_variant | 0.13 |
rpoC | 764227 | c.858G>C | synonymous_variant | 0.14 |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.2 |
rpoC | 764344 | c.975C>T | synonymous_variant | 0.2 |
rpoC | 764353 | c.984G>T | synonymous_variant | 0.2 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.21 |
rpoC | 764383 | c.1014C>G | synonymous_variant | 0.21 |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.21 |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.18 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.14 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.15 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.15 |
rpoC | 764435 | c.1066_1068delAGGinsCGA | synonymous_variant | 0.15 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.26 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.24 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.26 |
rpoC | 764500 | c.1131C>G | synonymous_variant | 0.26 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.5 |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.53 |
rpoC | 764536 | c.1167G>T | synonymous_variant | 0.56 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.56 |
rpoC | 764544 | p.Thr392Asn | missense_variant | 0.61 |
rpoC | 764548 | c.1179G>A | synonymous_variant | 0.61 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.75 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.75 |
rpoC | 764576 | c.1207_1208delTCinsAG | synonymous_variant | 0.75 |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.64 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.62 |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.62 |
rpoC | 764662 | c.1293G>C | synonymous_variant | 0.63 |
rpoC | 764701 | c.1332C>G | synonymous_variant | 0.46 |
rpoC | 764746 | c.1377G>T | synonymous_variant | 0.49 |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.48 |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.49 |
rpoC | 764763 | p.His465Leu | missense_variant | 0.49 |
rpoC | 764780 | c.1411_1413delAGCinsTCG | synonymous_variant | 0.48 |
rpoC | 764797 | c.1428G>C | synonymous_variant | 0.43 |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.43 |
rpoC | 764812 | c.1443C>G | synonymous_variant | 0.38 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.37 |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.37 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.38 |
rpoC | 764830 | c.1461C>G | synonymous_variant | 0.42 |
rpoC | 764857 | c.1488G>T | synonymous_variant | 0.42 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.44 |
rpoC | 764869 | c.1500C>T | synonymous_variant | 0.35 |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.35 |
rpoC | 764875 | c.1506C>G | synonymous_variant | 0.34 |
rpoC | 764878 | c.1509C>G | synonymous_variant | 0.3 |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.29 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.29 |
rpoC | 764893 | c.1524T>C | synonymous_variant | 0.29 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.3 |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.3 |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.19 |
rpoC | 764962 | c.1593G>C | synonymous_variant | 0.2 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.2 |
rpoC | 764983 | c.1614T>C | synonymous_variant | 0.18 |
rpoC | 765079 | c.1710T>G | synonymous_variant | 0.19 |
rpoC | 765082 | c.1713G>C | synonymous_variant | 0.19 |
rpoC | 765089 | c.1720_1722delTTGinsCTC | synonymous_variant | 0.2 |
rpoC | 765103 | c.1734G>T | synonymous_variant | 0.2 |
rpoC | 765143 | p.Val592Ile | missense_variant | 0.13 |
rpoC | 765382 | c.2013G>T | synonymous_variant | 0.27 |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.25 |
rpoC | 765405 | p.Leu679Pro | missense_variant | 0.38 |
rpoC | 765408 | p.Gly680Asp | missense_variant | 0.38 |
rpoC | 765412 | c.2043T>C | synonymous_variant | 0.38 |
rpoC | 765425 | p.Lys686Glu | missense_variant | 0.42 |
rpoC | 765435 | p.His689Pro | missense_variant | 0.5 |
rpoC | 765443 | p.Val692Arg | missense_variant | 0.27 |
rpoC | 765453 | p.Ala695Val | missense_variant | 0.25 |
rpoC | 765466 | c.2097C>T | synonymous_variant | 0.27 |
rpoC | 765493 | c.2124G>C | synonymous_variant | 0.38 |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.38 |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.38 |
rpoC | 765525 | p.Ala719Val | missense_variant | 0.2 |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.2 |
rpoC | 765547 | c.2178C>T | synonymous_variant | 0.2 |
rpoC | 765548 | c.2179_2181delAGCinsTCG | synonymous_variant | 0.2 |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.18 |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.18 |
rpoC | 765563 | p.Ser732Ala | missense_variant | 0.18 |
rpoC | 765569 | p.Ala734Ser | missense_variant | 0.18 |
rpoC | 765590 | p.Arg741Ala | missense_variant | 0.17 |
rpoC | 765596 | p.Lys743Ala | missense_variant | 0.17 |
rpoC | 765612 | p.His748Arg | missense_variant | 0.17 |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.2 |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.25 |
rpoC | 765856 | c.2487T>C | synonymous_variant | 0.24 |
rpoC | 765875 | p.Val836Ile | missense_variant | 0.22 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.29 |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.3 |
rpoC | 765904 | c.2535C>G | synonymous_variant | 0.33 |
rpoC | 765908 | p.Leu847Ala | missense_variant | 0.33 |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.43 |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.4 |
rpoC | 765940 | c.2571A>C | synonymous_variant | 0.4 |
rpoC | 765946 | c.2577C>T | synonymous_variant | 0.4 |
rpoC | 765947 | c.2578T>C | synonymous_variant | 0.4 |
rpoC | 765952 | c.2583G>C | synonymous_variant | 0.4 |
rpoC | 765958 | c.2589C>G | synonymous_variant | 0.27 |
rpoC | 765962 | c.2593T>C | synonymous_variant | 0.27 |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.18 |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.18 |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.17 |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.17 |
rpoC | 766333 | c.2964G>C | synonymous_variant | 0.22 |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.33 |
rpoC | 766361 | p.Val998Ile | missense_variant | 0.3 |
rpoC | 766366 | c.2997C>G | synonymous_variant | 0.3 |
rpoC | 766369 | c.3000C>G | synonymous_variant | 0.3 |
rpoC | 766375 | c.3006C>G | synonymous_variant | 0.33 |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.36 |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.36 |
rpoC | 766432 | c.3063T>C | synonymous_variant | 0.14 |
rpoC | 766435 | p.Glu1022Asp | missense_variant | 0.14 |
rpoC | 766990 | c.3621G>C | synonymous_variant | 0.29 |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.45 |
rpoC | 767002 | c.3633G>C | synonymous_variant | 0.54 |
rpoC | 767008 | c.3639G>C | synonymous_variant | 0.5 |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.38 |
rpoC | 767062 | c.3693C>T | synonymous_variant | 0.38 |
rpoC | 767065 | c.3696G>C | synonymous_variant | 0.42 |
rpoC | 767074 | c.3705T>C | synonymous_variant | 0.42 |
rpoC | 767080 | c.3711G>C | synonymous_variant | 0.38 |
rpoC | 767087 | p.Cys1240Ser | missense_variant | 0.42 |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.36 |
rpoC | 767103 | c.3735_3738delCAAC | frameshift_variant | 0.33 |
rpoC | 767110 | c.3741_3742insGGGC | frameshift_variant | 0.31 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.31 |
rpoC | 767134 | c.3765C>T | synonymous_variant | 0.33 |
rpoC | 767140 | c.3771G>C | synonymous_variant | 0.36 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 776182 | p.Asp767Asn | missense_variant | 1.0 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.21 |
rpsL | 781658 | c.99A>G | synonymous_variant | 0.21 |
rpsL | 781679 | c.120C>G | synonymous_variant | 0.18 |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.18 |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.17 |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.14 |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.14 |
rpsL | 781763 | c.204C>G | synonymous_variant | 0.16 |
rpsL | 781772 | c.213C>T | synonymous_variant | 0.2 |
rpsL | 781802 | c.243G>C | synonymous_variant | 0.2 |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.22 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.22 |
rpsL | 781829 | c.270G>C | synonymous_variant | 0.21 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.21 |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.19 |
rpsL | 781841 | c.282C>T | synonymous_variant | 0.18 |
rpsL | 781845 | p.Lys96Arg | missense_variant | 0.18 |
rpsL | 781859 | c.300T>C | synonymous_variant | 0.2 |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.17 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.16 |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.16 |
rpsL | 781884 | p.Asn109Asp | missense_variant | 0.14 |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.14 |
rplC | 800633 | c.-176T>C | upstream_gene_variant | 0.22 |
rplC | 800645 | c.-164C>T | upstream_gene_variant | 0.31 |
rplC | 800648 | c.-161A>G | upstream_gene_variant | 0.3 |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.28 |
rplC | 800667 | c.-142_-140delTCGinsAGC | upstream_gene_variant | 0.24 |
rplC | 800672 | c.-137G>C | upstream_gene_variant | 0.24 |
rplC | 800675 | c.-134G>A | upstream_gene_variant | 0.24 |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.2 |
rplC | 800702 | c.-107G>A | upstream_gene_variant | 0.17 |
rplC | 800703 | c.-106_-104delTTGinsCTC | upstream_gene_variant | 0.18 |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.17 |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.17 |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.17 |
rplC | 800735 | c.-74C>G | upstream_gene_variant | 0.19 |
rplC | 800738 | c.-71T>C | upstream_gene_variant | 0.19 |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.17 |
rplC | 800762 | c.-47T>C | upstream_gene_variant | 0.17 |
fbiC | 1302968 | p.Pro13Leu | missense_variant | 0.19 |
fbiC | 1303938 | c.1008C>T | synonymous_variant | 0.14 |
fbiC | 1303947 | c.1017T>G | synonymous_variant | 0.14 |
fbiC | 1303973 | p.Gly348Ala | missense_variant | 0.13 |
fbiC | 1303981 | p.Val351Ile | missense_variant | 0.24 |
fbiC | 1303998 | c.1068T>C | synonymous_variant | 0.27 |
fbiC | 1304004 | c.1074A>G | synonymous_variant | 0.27 |
fbiC | 1304562 | c.1632G>C | synonymous_variant | 0.24 |
fbiC | 1304567 | p.Phe546Tyr | missense_variant | 0.24 |
fbiC | 1304574 | c.1644C>G | synonymous_variant | 0.21 |
fbiC | 1304580 | c.1650T>G | synonymous_variant | 0.19 |
fbiC | 1304613 | c.1683T>C | synonymous_variant | 0.2 |
fbiC | 1304619 | c.1689G>A | synonymous_variant | 0.21 |
fbiC | 1304628 | c.1698G>C | synonymous_variant | 0.23 |
fbiC | 1304640 | c.1710A>C | synonymous_variant | 0.21 |
Rv1258c | 1406760 | c.580_581insC | frameshift_variant | 1.0 |
Rv1258c | 1407324 | p.Arg6His | missense_variant | 0.17 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471923 | n.78T>C | non_coding_transcript_exon_variant | 0.35 |
rrs | 1471929 | n.84C>G | non_coding_transcript_exon_variant | 0.34 |
rrs | 1471930 | n.85G>C | non_coding_transcript_exon_variant | 0.34 |
rrs | 1471931 | n.86G>T | non_coding_transcript_exon_variant | 0.34 |
rrs | 1471932 | n.87A>G | non_coding_transcript_exon_variant | 0.34 |
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1471978 | n.133C>T | non_coding_transcript_exon_variant | 0.66 |
rrs | 1471985 | n.140T>C | non_coding_transcript_exon_variant | 0.66 |
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 0.66 |
rrs | 1471996 | n.151C>T | non_coding_transcript_exon_variant | 0.71 |
rrs | 1472017 | n.172C>T | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472023 | n.178G>T | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472028 | n.183A>G | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472030 | n.185G>T | non_coding_transcript_exon_variant | 0.71 |
rrs | 1472032 | n.187G>A | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472033 | n.188A>T | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472034 | n.189T>C | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472040 | n.195T>G | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472041 | n.196C>T | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472043 | n.198T>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.7 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.75 |
rrs | 1472070 | n.225G>A | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.84 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472137 | n.292G>A | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472151 | n.306C>T | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472285 | n.440A>G | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472289 | n.444T>G | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472290 | n.445C>G | non_coding_transcript_exon_variant | 0.82 |
rrs | 1472291 | n.446G>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472324 | n.479G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472471 | n.626G>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472497 | n.652G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472673 | n.828T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472675 | n.830T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472677 | n.832C>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472680 | n.835C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472682 | n.837T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472683 | n.838T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472686 | n.841G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472687 | n.842A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472690 | n.845C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472836 | n.991G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472958 | n.1113A>G | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472960 | n.1115G>A | non_coding_transcript_exon_variant | 0.64 |
rrs | 1472986 | n.1141C>T | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472988 | n.1143T>C | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.77 |
rrs | 1473081 | n.1236C>G | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473082 | n.1237G>C | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.85 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.87 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.87 |
rrs | 1473129 | n.1284C>G | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473130 | n.1285G>T | non_coding_transcript_exon_variant | 0.87 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.8 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473294 | n.1449A>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.62 |
rrl | 1474201 | n.544T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474202 | n.545T>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474495 | n.838G>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474498 | n.841G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474505 | n.848C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474508 | n.851C>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474552 | n.895C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474627 | n.970G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474639 | n.982G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474692 | n.1035G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474709 | n.1053_1056delTGGT | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474717 | n.1060_1061insGTGAG | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474803 | n.1146G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474825 | n.1168G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475443 | n.1786G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475452 | n.1795C>A | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475460 | n.1803A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475475 | n.1818C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475479 | n.1822C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475480 | n.1823A>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475481 | n.1824C>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475482 | n.1825A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475538 | n.1881T>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475539 | n.1882A>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475550 | n.1893A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475571 | n.1914A>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475699 | n.2042C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475707 | n.2050T>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475759 | n.2102C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1475760 | n.2104_2107delCGCA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475766 | n.2109G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 0.85 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.73 |
rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476033 | n.2376T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476035 | n.2378G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476088 | n.2431A>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476099 | n.2442A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476105 | n.2450delA | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476221 | n.2564T>C | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476251 | n.2594T>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.9 |
rrl | 1476297 | n.2640C>G | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476298 | n.2641C>G | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476300 | n.2643G>A | non_coding_transcript_exon_variant | 0.89 |
rrl | 1476309 | n.2652G>C | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476524 | n.2867_2868insT | non_coding_transcript_exon_variant | 0.88 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.77 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476630 | n.2973A>G | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476661 | n.3004A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476665 | n.3008T>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476666 | n.3009C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476675 | n.3018C>G | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476690 | n.3033_3034insCA | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476699 | n.3042A>G | non_coding_transcript_exon_variant | 0.36 |
rpsA | 1833583 | c.42C>T | synonymous_variant | 0.14 |
rpsA | 1833589 | c.48A>C | synonymous_variant | 0.14 |
rpsA | 1833595 | c.54T>G | synonymous_variant | 0.14 |
rpsA | 1833596 | p.Ser19Ala | missense_variant | 0.14 |
rpsA | 1833607 | c.66T>C | synonymous_variant | 0.15 |
rpsA | 1833673 | c.132C>G | synonymous_variant | 0.3 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.3 |
rpsA | 1833679 | c.138G>C | synonymous_variant | 0.31 |
rpsA | 1833682 | c.141C>T | synonymous_variant | 0.33 |
rpsA | 1833685 | c.144G>C | synonymous_variant | 0.33 |
rpsA | 1833694 | c.153G>T | synonymous_variant | 0.33 |
rpsA | 1833697 | c.156C>G | synonymous_variant | 0.33 |
rpsA | 1833700 | c.159C>T | synonymous_variant | 0.33 |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.33 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.28 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.29 |
rpsA | 1833739 | c.198C>T | synonymous_variant | 0.28 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.28 |
rpsA | 1833748 | c.207C>G | synonymous_variant | 0.25 |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.25 |
rpsA | 1833769 | c.228C>G | synonymous_variant | 0.25 |
rpsA | 1833771 | p.Asn77Ser | missense_variant | 0.25 |
rpsA | 1833775 | c.234G>A | synonymous_variant | 0.27 |
rpsA | 1833781 | c.240T>C | synonymous_variant | 0.23 |
rpsA | 1833782 | p.Ser81Glu | missense_variant | 0.23 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.29 |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.13 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.27 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.29 |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.28 |
rpsA | 1833844 | c.303C>T | synonymous_variant | 0.28 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.28 |
rpsA | 1833850 | c.309C>G | synonymous_variant | 0.28 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.32 |
rpsA | 1833862 | c.321G>T | synonymous_variant | 0.35 |
rpsA | 1833874 | c.333T>G | synonymous_variant | 0.5 |
rpsA | 1833894 | p.Ala118Glu | missense_variant | 0.65 |
rpsA | 1833905 | p.Lys122Arg | missense_variant | 0.62 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.59 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.45 |
rpsA | 1833961 | c.420C>G | synonymous_variant | 0.42 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.38 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.32 |
rpsA | 1833985 | c.444G>C | synonymous_variant | 0.32 |
rpsA | 1833988 | c.447C>G | synonymous_variant | 0.33 |
rpsA | 1833991 | c.450C>T | synonymous_variant | 0.36 |
rpsA | 1834009 | c.468C>T | synonymous_variant | 0.4 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.39 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.38 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.36 |
rpsA | 1834046 | p.Ile169Val | missense_variant | 0.35 |
rpsA | 1834069 | c.528G>C | synonymous_variant | 0.3 |
rpsA | 1834093 | c.552G>C | synonymous_variant | 0.23 |
rpsA | 1834099 | c.558C>G | synonymous_variant | 0.21 |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.21 |
rpsA | 1834105 | c.564C>T | synonymous_variant | 0.21 |
rpsA | 1834108 | c.567C>G | synonymous_variant | 0.21 |
rpsA | 1834114 | c.573G>C | synonymous_variant | 0.18 |
rpsA | 1834123 | c.582C>G | synonymous_variant | 0.2 |
rpsA | 1834135 | c.594G>C | synonymous_variant | 0.18 |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.18 |
rpsA | 1834255 | c.714C>G | synonymous_variant | 0.24 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.22 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.24 |
rpsA | 1834285 | c.744G>C | synonymous_variant | 0.27 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.29 |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.29 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.3 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.48 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.46 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 0.46 |
rpsA | 1834361 | c.820_822delTTGinsCTC | synonymous_variant | 0.48 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.55 |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.5 |
rpsA | 1834399 | p.His286Gln | missense_variant | 0.52 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.48 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.39 |
rpsA | 1834451 | c.910_912delTTGinsCTC | synonymous_variant | 0.4 |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.4 |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.44 |
rpsA | 1834468 | c.927A>C | synonymous_variant | 0.44 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.44 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.46 |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.64 |
rpsA | 1834543 | c.1002C>G | synonymous_variant | 0.6 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.58 |
rpsA | 1834552 | c.1011G>C | synonymous_variant | 0.54 |
rpsA | 1834555 | c.1014T>G | synonymous_variant | 0.52 |
rpsA | 1834561 | c.1020C>G | synonymous_variant | 0.59 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.62 |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 0.62 |
rpsA | 1834627 | c.1086C>G | synonymous_variant | 0.62 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.61 |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.59 |
rpsA | 1834667 | p.Ala376Ser | missense_variant | 0.5 |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.56 |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.54 |
rpsA | 1834738 | c.1197A>G | synonymous_variant | 0.5 |
rpsA | 1834747 | c.1206A>G | synonymous_variant | 0.45 |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.4 |
rpsA | 1834759 | c.1218A>C | synonymous_variant | 0.38 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2155649 | p.Tyr155His | missense_variant | 0.25 |
katG | 2155655 | p.Lys153Gln | missense_variant | 0.33 |
katG | 2155661 | p.Val151Ile | missense_variant | 0.3 |
katG | 2155674 | c.438G>C | synonymous_variant | 0.33 |
katG | 2155680 | c.432G>C | synonymous_variant | 0.36 |
katG | 2155691 | c.421T>C | synonymous_variant | 0.46 |
katG | 2155716 | c.396T>C | synonymous_variant | 0.45 |
katG | 2155722 | c.390G>C | synonymous_variant | 0.43 |
katG | 2155737 | c.375C>G | synonymous_variant | 0.45 |
katG | 2155741 | p.Gly124His | missense_variant | 0.47 |
katG | 2155765 | p.His116Ser | missense_variant | 0.45 |
katG | 2155785 | c.327T>C | synonymous_variant | 0.38 |
katG | 2155796 | p.Ala106Ser | missense_variant | 0.35 |
katG | 2155806 | c.306T>C | synonymous_variant | 0.27 |
katG | 2155812 | c.300G>C | synonymous_variant | 0.27 |
katG | 2155815 | c.297G>C | synonymous_variant | 0.29 |
katG | 2155823 | p.His97Asn | missense_variant | 0.31 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2169927 | p.Asn229Ser | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2517917 | c.-198G>C | upstream_gene_variant | 0.37 |
kasA | 2517921 | c.-194_-192delACCinsGTG | upstream_gene_variant | 0.33 |
kasA | 2517945 | c.-170A>G | upstream_gene_variant | 0.29 |
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 0.27 |
kasA | 2517968 | c.-147T>C | upstream_gene_variant | 0.25 |
kasA | 2517974 | c.-141T>C | upstream_gene_variant | 0.17 |
folC | 2746198 | c.1401C>T | synonymous_variant | 0.22 |
Rv2752c | 3066295 | c.-104C>T | upstream_gene_variant | 0.14 |
thyX | 3067325 | c.621A>G | synonymous_variant | 0.2 |
thyX | 3067328 | c.618G>C | synonymous_variant | 0.2 |
thyX | 3067343 | p.Ser201Thr | missense_variant | 0.17 |
thyX | 3067346 | c.600C>G | synonymous_variant | 0.17 |
thyX | 3067355 | p.Ala197Gly | missense_variant | 0.17 |
thyX | 3067364 | c.582C>T | synonymous_variant | 0.14 |
thyX | 3067376 | c.570G>T | synonymous_variant | 0.14 |
thyX | 3067406 | c.540A>G | synonymous_variant | 0.17 |
thyX | 3067409 | c.537C>G | synonymous_variant | 0.17 |
thyX | 3067418 | c.528C>G | synonymous_variant | 0.15 |
thyX | 3067421 | c.525G>C | synonymous_variant | 0.14 |
thyX | 3067429 | p.Ala173Ser | missense_variant | 0.17 |
thyX | 3067430 | c.516C>G | synonymous_variant | 0.17 |
thyX | 3067436 | c.510C>G | synonymous_variant | 0.17 |
thyX | 3067439 | c.507A>G | synonymous_variant | 0.17 |
thyX | 3067442 | c.504C>G | synonymous_variant | 0.17 |
thyX | 3067445 | c.501C>G | synonymous_variant | 0.17 |
thyX | 3067451 | c.495G>A | synonymous_variant | 0.18 |
thyX | 3067457 | c.489C>G | synonymous_variant | 0.18 |
thyX | 3067463 | c.483C>T | synonymous_variant | 0.18 |
thyA | 3073917 | c.555C>G | synonymous_variant | 0.22 |
thyA | 3073923 | c.547_549delTTGinsCTT | synonymous_variant | 0.25 |
thyA | 3073932 | c.538_540delAGCinsTCG | synonymous_variant | 0.25 |
thyA | 3073950 | c.522G>T | synonymous_variant | 0.27 |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.27 |
thyA | 3073956 | c.516G>C | synonymous_variant | 0.25 |
thyA | 3073959 | c.513T>C | synonymous_variant | 0.25 |
thyA | 3073964 | c.508C>T | synonymous_variant | 0.25 |
thyA | 3073968 | c.504C>G | synonymous_variant | 0.25 |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.25 |
thyA | 3073980 | c.492C>T | synonymous_variant | 0.25 |
thyA | 3073983 | c.489C>G | synonymous_variant | 0.25 |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.25 |
thyA | 3073995 | c.477G>C | synonymous_variant | 0.25 |
thyA | 3073999 | p.Arg158Lys | missense_variant | 0.27 |
thyA | 3074004 | p.Asp156Glu | missense_variant | 0.25 |
thyA | 3074028 | c.444G>C | synonymous_variant | 0.23 |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.23 |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.23 |
ald | 3086731 | c.-89A>G | upstream_gene_variant | 1.0 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
fbiD | 3339444 | c.327C>T | synonymous_variant | 0.13 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
fprA | 3474143 | p.Trp46Tyr | missense_variant | 0.13 |
whiB7 | 3568795 | c.-116A>G | upstream_gene_variant | 1.0 |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 1.0 |
rpoA | 3877674 | c.834C>T | synonymous_variant | 0.13 |
rpoA | 3877677 | c.831G>C | synonymous_variant | 0.14 |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.21 |
rpoA | 3877734 | c.774G>C | synonymous_variant | 0.18 |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.2 |
rpoA | 3877743 | p.Asp255Glu | missense_variant | 0.18 |
rpoA | 3877749 | c.759C>T | synonymous_variant | 0.17 |
rpoA | 3877752 | p.Asp252Glu | missense_variant | 0.2 |
rpoA | 3877765 | p.Ala248Ser | missense_variant | 0.17 |
rpoA | 3877770 | p.Ser246Ala | missense_variant | 0.17 |
rpoA | 3877773 | c.735G>C | synonymous_variant | 0.17 |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.17 |
rpoA | 3877794 | c.714G>C | synonymous_variant | 0.23 |
rpoA | 3877836 | c.672A>G | synonymous_variant | 0.24 |
rpoA | 3877842 | c.666A>T | synonymous_variant | 0.24 |
rpoA | 3877854 | c.652_654delTTGinsCTC | synonymous_variant | 0.38 |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.42 |
rpoA | 3877872 | c.636C>T | synonymous_variant | 0.43 |
rpoA | 3877875 | c.633T>C | synonymous_variant | 0.43 |
rpoA | 3877887 | c.621G>C | synonymous_variant | 0.44 |
rpoA | 3877893 | c.615C>G | synonymous_variant | 0.44 |
rpoA | 3877898 | p.Pro204Ala | missense_variant | 0.46 |
rpoA | 3877900 | p.Ser203Thr | missense_variant | 0.46 |
rpoA | 3877905 | c.603A>C | synonymous_variant | 0.5 |
rpoA | 3877908 | c.600T>C | synonymous_variant | 0.48 |
rpoA | 3877929 | p.Ile193Val | missense_variant | 0.43 |
rpoA | 3877934 | c.574C>T | synonymous_variant | 0.42 |
rpoA | 3877935 | p.Lys191Arg | missense_variant | 0.42 |
rpoA | 3877938 | c.570C>T | synonymous_variant | 0.42 |
rpoA | 3877962 | c.546G>C | synonymous_variant | 0.45 |
rpoA | 3877971 | p.Asp179Glu | missense_variant | 0.42 |
rpoA | 3877974 | c.534G>C | synonymous_variant | 0.39 |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.38 |
rpoA | 3877995 | c.513G>C | synonymous_variant | 0.33 |
rpoA | 3878001 | c.507A>G | synonymous_variant | 0.13 |
rpoA | 3878010 | c.498C>G | synonymous_variant | 0.14 |
rpoA | 3878061 | c.447G>C | synonymous_variant | 0.18 |
rpoA | 3878067 | c.441C>G | synonymous_variant | 0.17 |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.15 |
rpoA | 3878082 | c.426T>G | synonymous_variant | 0.27 |
rpoA | 3878102 | p.Val136Ile | missense_variant | 0.4 |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.4 |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.43 |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.39 |
rpoA | 3878124 | c.384G>C | synonymous_variant | 0.39 |
rpoA | 3878127 | c.381G>C | synonymous_variant | 0.41 |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.4 |
rpoA | 3878141 | p.Met123Leu | missense_variant | 0.39 |
rpoA | 3878143 | p.Gly122Asp | missense_variant | 0.39 |
rpoA | 3878145 | c.363C>G | synonymous_variant | 0.39 |
rpoA | 3878157 | c.351C>G | synonymous_variant | 0.5 |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.5 |
rpoA | 3878172 | c.336G>C | synonymous_variant | 0.46 |
rpoA | 3878185 | p.Gly108Ala | missense_variant | 0.48 |
rpoA | 3878188 | p.Ala107Gly | missense_variant | 0.48 |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.48 |
rpoA | 3878197 | p.Glu104Ala | missense_variant | 0.5 |
rpoA | 3878202 | c.306G>C | synonymous_variant | 0.48 |
rpoA | 3878217 | p.Leu97Val | missense_variant | 0.48 |
rpoA | 3878244 | c.264G>A | synonymous_variant | 0.43 |
rpoA | 3878251 | c.256_257delTCinsAG | synonymous_variant | 0.37 |
rpoA | 3878253 | c.255G>C | synonymous_variant | 0.37 |
rpoA | 3878259 | c.249G>C | synonymous_variant | 0.39 |
rpoA | 3878264 | p.Ser82Gly | missense_variant | 0.41 |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.41 |
rpoA | 3878282 | p.Ile76Val | missense_variant | 0.23 |
rpoA | 3878283 | p.Glu75Asp | missense_variant | 0.23 |
rpoA | 3878556 | c.-49T>G | upstream_gene_variant | 0.4 |
clpC1 | 4038468 | c.2236delG | frameshift_variant | 0.17 |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.33 |
clpC1 | 4038749 | c.1956C>G | synonymous_variant | 0.35 |
clpC1 | 4038755 | c.1950G>T | synonymous_variant | 0.4 |
clpC1 | 4038767 | c.1938G>T | synonymous_variant | 0.39 |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.41 |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.47 |
clpC1 | 4038795 | p.Ser637Thr | missense_variant | 0.45 |
clpC1 | 4038810 | p.Gln632Pro | missense_variant | 0.52 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.52 |
clpC1 | 4038815 | c.1890G>C | synonymous_variant | 0.5 |
clpC1 | 4038839 | c.1866G>C | synonymous_variant | 0.54 |
clpC1 | 4038842 | c.1863G>C | synonymous_variant | 0.52 |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.52 |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.56 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.53 |
clpC1 | 4038887 | c.1818G>A | synonymous_variant | 0.47 |
clpC1 | 4038890 | p.Glu605Asp | missense_variant | 0.44 |
clpC1 | 4038905 | c.1800A>C | synonymous_variant | 0.47 |
clpC1 | 4038911 | c.1794G>T | synonymous_variant | 0.47 |
clpC1 | 4038914 | c.1791G>T | synonymous_variant | 0.55 |
clpC1 | 4038917 | c.1788C>T | synonymous_variant | 0.5 |
clpC1 | 4038923 | c.1782A>C | synonymous_variant | 0.58 |
clpC1 | 4038932 | c.1773G>T | synonymous_variant | 0.5 |
clpC1 | 4038941 | c.1764G>C | synonymous_variant | 0.6 |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.75 |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.75 |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.82 |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.67 |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.67 |
clpC1 | 4038977 | c.1728G>C | synonymous_variant | 0.8 |
clpC1 | 4038980 | c.1725C>T | synonymous_variant | 0.8 |
clpC1 | 4038986 | p.Asp573Glu | missense_variant | 0.8 |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.8 |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.82 |
clpC1 | 4039003 | p.Asn568Asp | missense_variant | 0.15 |
clpC1 | 4039004 | c.1701C>G | synonymous_variant | 0.71 |
clpC1 | 4039021 | c.1684C>T | synonymous_variant | 0.75 |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.85 |
clpC1 | 4039031 | c.1674T>A | synonymous_variant | 0.75 |
clpC1 | 4039037 | c.1668T>C | synonymous_variant | 0.68 |
clpC1 | 4039046 | c.1659C>T | synonymous_variant | 0.69 |
clpC1 | 4039067 | c.1638G>C | synonymous_variant | 0.69 |
clpC1 | 4039073 | c.1632C>T | synonymous_variant | 0.68 |
clpC1 | 4039082 | c.1623C>T | synonymous_variant | 0.65 |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 0.62 |
clpC1 | 4039094 | c.1611C>G | synonymous_variant | 0.62 |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 0.62 |
clpC1 | 4039103 | c.1602T>G | synonymous_variant | 0.65 |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.65 |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 0.62 |
clpC1 | 4039116 | p.Lys530Arg | missense_variant | 0.62 |
clpC1 | 4039118 | c.1587C>G | synonymous_variant | 0.62 |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.62 |
clpC1 | 4039124 | c.1581C>G | synonymous_variant | 0.62 |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.57 |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.52 |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.29 |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.33 |
clpC1 | 4039181 | c.1522_1524delTTGinsCTC | synonymous_variant | 0.22 |
clpC1 | 4039187 | c.1518G>T | synonymous_variant | 0.2 |
clpC1 | 4039454 | c.1251A>G | synonymous_variant | 0.22 |
clpC1 | 4039463 | c.1242C>G | synonymous_variant | 0.2 |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 0.2 |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 0.22 |
clpC1 | 4039472 | c.1233G>C | synonymous_variant | 0.22 |
clpC1 | 4039481 | c.1224T>G | synonymous_variant | 0.33 |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 0.29 |
clpC1 | 4039517 | c.1188C>G | synonymous_variant | 0.26 |
clpC1 | 4039532 | c.1173C>T | synonymous_variant | 0.26 |
clpC1 | 4039541 | c.1164C>G | synonymous_variant | 0.22 |
clpC1 | 4039553 | c.1152C>G | synonymous_variant | 0.16 |
clpC1 | 4039559 | c.1146C>G | synonymous_variant | 0.16 |
clpC1 | 4039562 | c.1143C>T | synonymous_variant | 0.15 |
clpC1 | 4039565 | p.Val380Ala | missense_variant | 0.15 |
clpC1 | 4039577 | c.1128T>C | synonymous_variant | 0.15 |
clpC1 | 4039586 | c.1119G>C | synonymous_variant | 0.15 |
clpC1 | 4039595 | c.1110C>T | synonymous_variant | 0.18 |
clpC1 | 4039602 | p.Ala368Gln | missense_variant | 0.19 |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 0.3 |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 0.3 |
clpC1 | 4039654 | p.Thr351Ser | missense_variant | 0.44 |
clpC1 | 4039655 | c.1050G>C | synonymous_variant | 0.44 |
clpC1 | 4039661 | c.1044T>C | synonymous_variant | 0.44 |
clpC1 | 4039670 | c.1035G>C | synonymous_variant | 0.52 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.57 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.57 |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.61 |
clpC1 | 4039748 | c.957G>C | synonymous_variant | 0.63 |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.61 |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.59 |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.59 |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.57 |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.59 |
clpC1 | 4039772 | c.933G>A | synonymous_variant | 0.59 |
clpC1 | 4039787 | c.916_918delTCGinsAGC | synonymous_variant | 0.48 |
clpC1 | 4039796 | c.909C>T | synonymous_variant | 0.52 |
clpC1 | 4039802 | c.903G>C | synonymous_variant | 0.59 |
clpC1 | 4039820 | c.885T>C | synonymous_variant | 0.59 |
clpC1 | 4039823 | c.882T>G | synonymous_variant | 0.62 |
clpC1 | 4039834 | p.Thr291Pro | missense_variant | 0.2 |
clpC1 | 4039835 | c.869_870insT | frameshift_variant | 0.5 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.69 |
clpC1 | 4039856 | c.849C>T | synonymous_variant | 0.67 |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.44 |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.42 |
clpC1 | 4039907 | c.798G>A | synonymous_variant | 0.38 |
clpC1 | 4039916 | c.789T>C | synonymous_variant | 0.42 |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.36 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.33 |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 0.3 |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.27 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.28 |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.32 |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 0.33 |
clpC1 | 4039991 | c.714G>T | synonymous_variant | 0.34 |
clpC1 | 4039994 | p.Glu237Asn | missense_variant | 0.39 |
clpC1 | 4040001 | p.His235Ser | missense_variant | 0.39 |
clpC1 | 4040009 | c.696C>G | synonymous_variant | 0.39 |
clpC1 | 4040015 | c.690G>C | synonymous_variant | 0.38 |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.41 |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.42 |
clpC1 | 4040027 | c.678C>G | synonymous_variant | 0.42 |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.44 |
clpC1 | 4040036 | c.669C>G | synonymous_variant | 0.44 |
clpC1 | 4040051 | c.654C>G | synonymous_variant | 0.46 |
clpC1 | 4040069 | c.636G>C | synonymous_variant | 0.45 |
clpC1 | 4040087 | c.618G>C | synonymous_variant | 0.41 |
clpC1 | 4040090 | c.615T>G | synonymous_variant | 0.41 |
clpC1 | 4040105 | c.600C>G | synonymous_variant | 0.33 |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 0.13 |
clpC1 | 4040273 | c.432T>A | synonymous_variant | 0.12 |
clpC1 | 4040300 | c.405C>T | synonymous_variant | 0.18 |
clpC1 | 4040306 | p.Arg133Ser | missense_variant | 0.18 |
clpC1 | 4040310 | p.Thr132Asn | missense_variant | 0.18 |
clpC1 | 4040315 | p.Glu130Asp | missense_variant | 0.19 |
clpC1 | 4040330 | c.375C>G | synonymous_variant | 0.18 |
clpC1 | 4040336 | c.369G>C | synonymous_variant | 0.18 |
clpC1 | 4040348 | c.357G>C | synonymous_variant | 0.18 |
clpC1 | 4040354 | c.351A>G | synonymous_variant | 0.18 |
clpC1 | 4040357 | c.348T>C | synonymous_variant | 0.19 |
clpC1 | 4040363 | c.342A>C | synonymous_variant | 0.17 |
clpC1 | 4040369 | c.336C>G | synonymous_variant | 0.17 |
clpC1 | 4040375 | c.330G>C | synonymous_variant | 0.17 |
clpC1 | 4040380 | c.325T>C | synonymous_variant | 0.15 |
clpC1 | 4040381 | c.324T>C | synonymous_variant | 0.15 |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 0.14 |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 0.14 |
clpC1 | 4040531 | p.Gly58Ala | missense_variant | 0.15 |
clpC1 | 4040570 | c.135C>G | synonymous_variant | 0.14 |
clpC1 | 4040573 | c.132T>C | synonymous_variant | 0.14 |
clpC1 | 4040582 | c.123G>T | synonymous_variant | 0.15 |
clpC1 | 4040585 | c.120A>G | synonymous_variant | 0.15 |
clpC1 | 4040588 | c.117T>C | synonymous_variant | 0.15 |
clpC1 | 4040597 | c.108C>T | synonymous_variant | 0.15 |
clpC1 | 4040600 | c.105A>G | synonymous_variant | 0.15 |
clpC1 | 4040603 | c.102T>C | synonymous_variant | 0.15 |
clpC1 | 4040606 | c.99T>C | synonymous_variant | 0.16 |
clpC1 | 4040633 | c.72C>T | synonymous_variant | 0.17 |
panD | 4044350 | c.-69C>T | upstream_gene_variant | 0.14 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4243346 | c.114A>G | synonymous_variant | 1.0 |
embA | 4243460 | c.228C>T | synonymous_variant | 1.0 |
aftB | 4267647 | p.Asp397Gly | missense_variant | 1.0 |
ethR | 4326964 | c.-585G>A | upstream_gene_variant | 0.17 |
ethR | 4326970 | c.-579G>T | upstream_gene_variant | 0.18 |
ethA | 4326984 | p.Pro164Thr | missense_variant | 0.13 |
whiB6 | 4338371 | p.Thr51Pro | missense_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
gid | 4407927 | p.Glu92Asp | missense_variant | 1.0 |