ERR176779
|
HR-TB
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR11465015
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675441
|
Other
|
lineage4.9
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
ERR11466062
|
Sensitive
|
lineage4.9.1
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
ERR9787030
|
RR-TB
|
lineage6.1.2
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR3675502
|
Sensitive
|
lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR28119827
|
Other
|
La3;lineage4.9
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR17832802
|
HR-TB
|
lineage3
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR29096410
|
Other
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR9786597
|
Other
|
lineage4.6.2.2
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
SRR29096943
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
ERR3797061
|
Other
|
La1.6;La3;lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
ERR176675
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR2693254
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR21733183
|
RR-TB
|
lineage1.1.2
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
ERR11465152
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR3675553
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR3675312
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR26159047
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
SRR29096178
|
Sensitive
|
lineage4.9
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR11465714
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR6832787
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR6045002
|
RR-TB
|
lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR28351455
|
Other
|
lineage3.1.2.1;lineage4
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR400529
|
Other
|
lineage3
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
SAMN02585910
|
Other
|
lineage2.2.1
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR3675492
|
Other
|
La1.7;lineage4.9
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR11465604
|
HR-TB
|
lineage4.8.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR3675577
|
Sensitive
|
lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR11465802
|
Other
|
La1.7;lineage4.3.4.1
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
SRR28868888
|
Other
|
lineage1.1.3.2
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR3797060
|
Other
|
La1.8.1
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR22251329
|
Other
|
lineage2.1
|
None
|
SRR29097066
|
Sensitive
|
lineage4.9
|
None
|
SRR29096174
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR1791725
|
Other
|
La1.8.1
|
None
|
SRR5431730
|
Other
|
La1.8.1
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR1173310
|
Other
|
lineage3.1.1
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR29096203
|
Sensitive
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4831618
|
MDR-TB
|
lineage2.1
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR3675222
|
Other
|
La1.7
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341319
|
Other
|
lineage3
|
None
|
SRR29097026
|
Other
|
lineage4.9
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR3675284
|
Sensitive
|
lineage4.9
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR176741
|
Other
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29096879
|
Sensitive
|
lineage4.9
|
None
|
SRR26399490
|
Sensitive
|
lineage4.9
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR3675280
|
RR-TB
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11465235
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR1915481
|
Other
|
La1.2.BCG;lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4798504
|
RR-TB
|
lineage3
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181328
|
Other
|
lineage2.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR29096150
|
Other
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|