TB-Profiler result

Run: SRR7496471
Summary

Run ID: SRR7496471

Sample name:

Date: 04-04-2023 19:08:01

Number of reads: 318767

Percentage reads mapped: 23.13

Strain:

Drug-resistance: Sensitive

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage1.2.1 Indo-Oceanic EAI2 RD239 1.0
lineage1.2.1.2.1 Indo-Oceanic NA RD239 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5627 p.Ala130Thr missense_variant 0.25
gyrB 6112 p.Met291Ile missense_variant 0.89
gyrB 6130 c.891T>C synonymous_variant 0.43
gyrB 6151 c.912C>T synonymous_variant 0.43
gyrB 6178 c.939C>T synonymous_variant 0.6
gyrB 6196 c.957C>T synonymous_variant 0.6
gyrB 6737 p.Thr500Ala missense_variant 0.2
gyrA 6745 c.-557T>G upstream_gene_variant 0.2
gyrB 6749 p.Ala504Ser missense_variant 0.2
gyrB 6764 p.Leu509Phe missense_variant 0.2
gyrA 6775 c.-527G>C upstream_gene_variant 0.22
gyrA 6793 c.-509T>C upstream_gene_variant 0.29
gyrB 6798 p.Gly520Ala missense_variant 0.29
gyrA 6805 c.-497G>C upstream_gene_variant 0.55
gyrA 6811 c.-491C>T upstream_gene_variant 0.5
gyrA 6841 c.-461T>C upstream_gene_variant 0.75
gyrA 6850 c.-452C>A upstream_gene_variant 0.6
gyrA 6856 c.-446T>C upstream_gene_variant 0.6
gyrA 6859 c.-443T>C upstream_gene_variant 0.6
gyrA 6862 c.-440C>G upstream_gene_variant 0.6
gyrA 6866 c.-436C>T upstream_gene_variant 0.6
gyrA 6869 c.-433T>C upstream_gene_variant 0.6
gyrA 6872 c.-430T>C upstream_gene_variant 0.6
gyrA 6878 c.-424T>C upstream_gene_variant 0.6
gyrA 6881 c.-421T>C upstream_gene_variant 0.6
gyrA 6898 c.-404G>A upstream_gene_variant 0.5
gyrB 6911 p.Asn558His missense_variant 0.67
gyrA 6916 c.-386G>C upstream_gene_variant 0.67
gyrA 6919 c.-383T>C upstream_gene_variant 0.67
gyrA 6922 c.-380G>C upstream_gene_variant 0.67
gyrB 6924 p.Phe562Tyr missense_variant 0.67
gyrA 6926 c.-376_-374delTTGinsCTA upstream_gene_variant 0.67
gyrA 6931 c.-371A>G upstream_gene_variant 0.67
gyrA 6934 c.-368A>G upstream_gene_variant 0.67
gyrB 7044 p.Asn602Ser missense_variant 0.5
gyrA 7078 c.-224A>C upstream_gene_variant 0.5
gyrA 7081 c.-221T>C upstream_gene_variant 0.5
gyrA 7084 c.-218A>G upstream_gene_variant 0.5
gyrB 7088 p.Asp617Asn missense_variant 0.5
gyrA 7093 c.-209T>C upstream_gene_variant 0.5
gyrA 7100 c.-202T>C upstream_gene_variant 0.75
gyrA 7123 c.-179C>G upstream_gene_variant 0.86
gyrB 7124 p.Ser629Glu missense_variant 0.86
gyrA 7132 c.-170T>C upstream_gene_variant 0.86
gyrA 7136 c.-166T>C upstream_gene_variant 0.86
gyrA 7141 c.-161T>G upstream_gene_variant 1.0
gyrA 7144 c.-158A>G upstream_gene_variant 1.0
gyrA 7150 c.-152G>C upstream_gene_variant 1.0
gyrA 7153 c.-149G>C upstream_gene_variant 1.0
gyrA 7165 c.-137C>T upstream_gene_variant 1.0
gyrA 7168 c.-134C>G upstream_gene_variant 1.0
gyrA 7177 c.-125G>A upstream_gene_variant 0.67
gyrA 7178 c.-124T>C upstream_gene_variant 0.67
gyrA 7198 c.-104C>T upstream_gene_variant 0.33
gyrA 7207 c.-95C>T upstream_gene_variant 0.33
gyrB 7209 p.Asp657Ala missense_variant 0.33
gyrA 7213 c.-89G>C upstream_gene_variant 0.33
gyrA 7216 c.-86G>C upstream_gene_variant 0.33
gyrA 7225 c.-77T>C upstream_gene_variant 0.33
gyrB 7229 p.Thr664Ala missense_variant 0.33
gyrA 7234 c.-68C>T upstream_gene_variant 0.33
gyrA 7240 c.-62C>G upstream_gene_variant 0.25
gyrA 7243 c.-59G>A upstream_gene_variant 0.25
gyrA 7252 c.-50G>C upstream_gene_variant 0.25
gyrA 7258 c.-44G>T upstream_gene_variant 0.25
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7394 c.93T>C synonymous_variant 0.18
gyrA 7421 c.120G>C synonymous_variant 0.2
gyrA 7442 c.141G>C synonymous_variant 0.25
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 8231 c.932dupG frameshift_variant 0.29
gyrA 8452 p.Ala384Val missense_variant 1.0
gyrA 8801 c.1500G>C synonymous_variant 0.18
gyrA 8829 c.1528_1530delTTGinsCTC synonymous_variant 0.29
gyrA 8849 c.1548C>G synonymous_variant 0.47
gyrA 8852 c.1551T>C synonymous_variant 0.55
gyrA 8858 c.1557T>C synonymous_variant 0.52
gyrA 8867 c.1566A>G synonymous_variant 0.52
gyrA 8870 c.1569G>C synonymous_variant 0.52
gyrA 8876 c.1575C>T synonymous_variant 0.54
gyrA 8913 p.Lys538Arg missense_variant 0.65
gyrA 8924 c.1623C>T synonymous_variant 0.65
gyrA 8930 c.1629C>T synonymous_variant 0.62
gyrA 8939 c.1638T>C synonymous_variant 0.65
gyrA 8942 c.1641G>C synonymous_variant 0.65
gyrA 8945 c.1644G>T synonymous_variant 0.65
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.65
gyrA 8967 p.Ala556Lys missense_variant 0.68
gyrA 8981 c.1680G>C synonymous_variant 0.6
gyrA 8982 p.Cys561Ser missense_variant 0.6
gyrA 8996 c.1695T>C synonymous_variant 0.58
gyrA 8998 p.Leu566Trp missense_variant 0.58
gyrA 9002 c.1701C>T synonymous_variant 0.58
gyrA 9018 p.Gln573Lys missense_variant 0.58
gyrA 9026 c.1725G>C synonymous_variant 0.5
gyrA 9029 c.1728T>G synonymous_variant 0.5
gyrA 9032 c.1731T>C synonymous_variant 0.5
gyrA 9035 c.1734G>C synonymous_variant 0.5
gyrA 9038 c.1737C>G synonymous_variant 0.5
gyrA 9044 c.1743C>G synonymous_variant 0.5
gyrA 9047 c.1746C>T synonymous_variant 0.47
gyrA 9050 p.Asp583Glu missense_variant 0.47
gyrA 9051 c.1750T>C synonymous_variant 0.47
gyrA 9056 c.1755C>G synonymous_variant 0.47
gyrA 9063 p.Ser588Asn missense_variant 0.47
gyrA 9068 c.1767G>C synonymous_variant 0.5
gyrA 9074 c.1773G>T synonymous_variant 0.5
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.4
gyrA 9113 c.1812C>G synonymous_variant 0.36
gyrA 9119 c.1818A>G synonymous_variant 0.36
gyrA 9128 c.1827C>G synonymous_variant 0.22
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9260 c.1959G>C synonymous_variant 1.0
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575368 c.21T>C synonymous_variant 1.0
mshA 576367 c.1020T>C synonymous_variant 0.5
mshA 576685 c.1338C>G synonymous_variant 0.4
rpoB 760070 c.264T>C synonymous_variant 0.59
rpoB 760091 c.285G>T synonymous_variant 0.58
rpoB 760101 c.295T>C synonymous_variant 0.58
rpoB 760106 c.300G>C synonymous_variant 0.56
rpoB 760112 c.306T>C synonymous_variant 0.58
rpoB 760115 c.309C>T synonymous_variant 0.56
rpoB 760118 c.312T>G synonymous_variant 0.56
rpoB 760120 p.Arg105His missense_variant 0.56
rpoB 760130 p.Asp108Glu missense_variant 0.55
rpoB 760139 c.333A>C synonymous_variant 0.6
rpoB 760140 p.Pro112Ser missense_variant 0.6
rpoB 760148 p.Asp114Glu missense_variant 0.59
rpoB 760157 c.351A>G synonymous_variant 0.62
rpoB 760172 c.366G>C synonymous_variant 0.65
rpoB 760181 c.375T>G synonymous_variant 0.67
rpoB 760184 c.378A>G synonymous_variant 0.67
rpoB 760185 c.379C>T synonymous_variant 0.73
rpoB 760199 c.393C>G synonymous_variant 0.68
rpoB 760233 c.427_429delAGTinsTCG synonymous_variant 0.68
rpoB 760241 c.435G>C synonymous_variant 0.67
rpoB 760253 c.447T>C synonymous_variant 0.66
rpoB 760265 p.Met153Ile missense_variant 0.68
rpoB 760274 p.Glu156Asp missense_variant 0.66
rpoB 760282 p.Thr159Ser missense_variant 0.66
rpoB 760298 c.492G>C synonymous_variant 0.62
rpoB 760310 c.504G>C synonymous_variant 0.48
rpoB 760316 c.510C>G synonymous_variant 0.43
rpoB 760330 c.525_526delGT frameshift_variant 0.37
rpoB 760340 c.534_535insC frameshift_variant 0.37
rpoB 760343 c.537G>C synonymous_variant 0.39
rpoB 760354 p.Glu183Ala missense_variant 0.37
rpoB 760356 p.Thr184Ala missense_variant 0.37
rpoB 760361 c.555T>C synonymous_variant 0.4
rpoB 760368 p.Ser188Ala missense_variant 0.48
rpoB 760376 p.Asp190Glu missense_variant 0.52
rpoB 760382 c.576G>C synonymous_variant 0.58
rpoB 760390 p.Ser195Thr missense_variant 0.62
rpoB 760400 c.594G>C synonymous_variant 0.63
rpoB 760407 p.Ser201Gly missense_variant 0.67
rpoB 760412 c.606C>T synonymous_variant 0.69
rpoB 760430 c.624T>C synonymous_variant 0.71
rpoB 760475 c.669A>G synonymous_variant 0.75
rpoB 760481 c.675G>T synonymous_variant 0.74
rpoB 760484 c.678A>G synonymous_variant 0.74
rpoB 760514 c.708C>T synonymous_variant 0.57
rpoB 760515 p.Trp237Leu missense_variant 0.57
rpoB 760522 p.Ser239Thr missense_variant 0.57
rpoB 760527 p.Gln241Glu missense_variant 0.57
rpoB 760532 c.726T>C synonymous_variant 0.59
rpoB 760533 p.Val243Thr missense_variant 0.59
rpoB 760541 c.735G>A synonymous_variant 0.59
rpoB 760547 c.741G>T synonymous_variant 0.59
rpoB 760563 p.Arg253Met missense_variant 0.58
rpoB 760568 c.762G>C synonymous_variant 0.58
rpoB 760571 c.765G>C synonymous_variant 0.58
rpoB 760591 p.Val262Ala missense_variant 0.62
rpoB 760611 c.805_807delTTGinsCTC synonymous_variant 0.5
rpoB 760616 p.Asp270Glu missense_variant 0.5
rpoB 760617 p.Ile271Val missense_variant 0.5
rpoB 760640 c.834C>T synonymous_variant 0.5
rpoB 760646 c.840C>G synonymous_variant 0.45
rpoB 760655 c.849A>G synonymous_variant 0.4
rpoB 760661 c.855A>C synonymous_variant 0.33
rpoB 760669 p.Thr288Asn missense_variant 0.2
rpoB 760679 c.873A>G synonymous_variant 0.2
rpoB 760682 c.876C>T synonymous_variant 0.2
rpoB 760859 c.1053T>C synonymous_variant 0.44
rpoB 760862 c.1056G>C synonymous_variant 0.44
rpoB 760871 c.1065C>G synonymous_variant 0.47
rpoB 760877 c.1071G>C synonymous_variant 0.5
rpoB 760886 c.1080A>G synonymous_variant 0.5
rpoB 760887 p.Thr361Val missense_variant 0.5
rpoB 760916 c.1110C>T synonymous_variant 0.62
rpoB 760928 c.1122G>C synonymous_variant 0.67
rpoB 760946 c.1140A>G synonymous_variant 0.7
rpoB 760958 c.1152G>C synonymous_variant 0.7
rpoB 760961 c.1155C>G synonymous_variant 0.71
rpoB 760965 p.Met387Leu missense_variant 0.71
rpoB 760973 c.1167G>T synonymous_variant 0.76
rpoB 760982 c.1176G>T synonymous_variant 0.76
rpoB 760985 c.1179G>C synonymous_variant 0.86
rpoB 760988 c.1182C>G synonymous_variant 0.86
rpoB 760991 c.1185G>T synonymous_variant 0.83
rpoB 760997 c.1191G>C synonymous_variant 0.83
rpoB 761015 c.1209G>C synonymous_variant 0.92
rpoB 761027 c.1221A>C synonymous_variant 0.93
rpoB 761036 c.1230G>C synonymous_variant 0.93
rpoB 761037 c.1231T>C synonymous_variant 0.93
rpoB 761051 c.1245G>T synonymous_variant 0.93
rpoB 761054 c.1248G>C synonymous_variant 0.93
rpoB 761057 c.1251G>C synonymous_variant 0.93
rpoB 761060 c.1254C>G synonymous_variant 0.93
rpoB 761063 c.1257C>G synonymous_variant 0.93
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.88
rpoB 761102 c.1296A>G synonymous_variant 0.89
rpoB 761132 c.1326G>T synonymous_variant 0.93
rpoB 761133 c.1327T>C synonymous_variant 0.93
rpoB 761147 c.1341C>T synonymous_variant 0.92
rpoB 761150 c.1344A>C synonymous_variant 0.92
rpoB 761165 c.1359G>C synonymous_variant 0.92
rpoB 761168 c.1362C>G synonymous_variant 0.92
rpoB 761178 c.1372_1374delTCAinsAGC synonymous_variant 0.9
rpoB 761195 c.1389G>C synonymous_variant 0.91
rpoB 761198 c.1392G>C synonymous_variant 0.84
rpoB 761204 c.1398C>G synonymous_variant 0.84
rpoB 761219 c.1413G>C synonymous_variant 0.79
rpoB 761220 c.1414_1416delTCGinsAGC synonymous_variant 0.79
rpoB 761234 c.1428G>C synonymous_variant 0.79
rpoB 761249 c.1443A>G synonymous_variant 0.74
rpoB 761255 c.1449T>G synonymous_variant 0.71
rpoB 761261 c.1455G>A synonymous_variant 0.71
rpoB 761264 c.1458C>G synonymous_variant 0.7
rpoB 761276 c.1470G>C synonymous_variant 0.76
rpoB 761282 c.1476C>T synonymous_variant 0.75
rpoB 761294 c.1488G>C synonymous_variant 0.75
rpoB 761309 c.1503C>T synonymous_variant 0.71
rpoB 761318 c.1512G>C synonymous_variant 0.69
rpoB 761327 c.1521A>G synonymous_variant 0.78
rpoB 761330 c.1524G>C synonymous_variant 0.78
rpoB 761345 c.1539G>T synonymous_variant 0.71
rpoB 761354 c.1548C>T synonymous_variant 0.57
rpoB 761360 c.1554T>C synonymous_variant 0.5
rpoB 761362 p.Ser519Thr missense_variant 0.5
rpoB 761367 p.Glu521Gln missense_variant 0.5
rpoB 761374 p.Val523Glu missense_variant 0.5
rpoB 761379 p.Leu525Met missense_variant 0.4
rpoB 761555 c.1749G>C synonymous_variant 0.29
rpoB 761558 c.1752C>G synonymous_variant 0.29
rpoB 761570 c.1764T>C synonymous_variant 0.25
rpoB 761573 c.1767C>G synonymous_variant 0.25
rpoB 761579 c.1773G>C synonymous_variant 0.25
rpoB 761594 c.1788C>G synonymous_variant 0.4
rpoB 761600 c.1794T>C synonymous_variant 0.4
rpoB 761603 c.1797C>G synonymous_variant 0.4
rpoB 761606 c.1800C>G synonymous_variant 0.4
rpoB 761612 c.1806G>C synonymous_variant 0.4
rpoB 761615 c.1809A>C synonymous_variant 0.4
rpoB 761627 c.1821C>T synonymous_variant 0.4
rpoB 761633 c.1827G>C synonymous_variant 0.5
rpoB 761645 c.1839C>G synonymous_variant 0.5
rpoB 761648 c.1842T>C synonymous_variant 0.5
rpoB 761650 p.Ser615Asn missense_variant 0.5
rpoB 761655 p.Ala617Ser missense_variant 0.5
rpoB 761666 c.1860G>C synonymous_variant 0.5
rpoB 761669 c.1863C>T synonymous_variant 0.5
rpoB 761675 c.1869G>C synonymous_variant 0.33
rpoB 761681 c.1875G>A synonymous_variant 0.33
rpoB 761687 c.1881C>T synonymous_variant 0.33
rpoB 761690 c.1884G>C synonymous_variant 0.33
rpoB 761693 c.1887G>C synonymous_variant 0.33
rpoB 761694 p.Ile630Val missense_variant 0.33
rpoB 761705 c.1899C>T synonymous_variant 0.33
rpoB 761711 c.1905C>G synonymous_variant 0.33
rpoB 761714 c.1908C>G synonymous_variant 0.33
rpoB 761718 p.Ala638Ser missense_variant 0.33
rpoB 761723 p.Glu639Asp missense_variant 0.33
rpoB 761724 p.Glu640Lys missense_variant 0.33
rpoB 761728 p.Ser641Thr missense_variant 0.33
rpoB 761732 c.1926C>T synonymous_variant 0.33
rpoB 761735 c.1929C>G synonymous_variant 0.33
rpoB 761736 p.Ile644Val missense_variant 0.33
rpoB 761747 c.1941G>C synonymous_variant 0.5
rpoB 761750 c.1944G>C synonymous_variant 0.5
rpoB 761765 c.1959T>C synonymous_variant 0.45
rpoB 761772 p.His656Ala missense_variant 0.42
rpoB 761778 p.Asn658Asp missense_variant 0.42
rpoB 761789 c.1983G>C synonymous_variant 0.42
rpoB 761790 p.Arg662Asp missense_variant 0.42
rpoB 761813 c.2007T>C synonymous_variant 0.4
rpoB 761816 c.2010C>G synonymous_variant 0.4
rpoB 761819 c.2013G>T synonymous_variant 0.4
rpoB 761834 c.2028T>C synonymous_variant 0.4
rpoB 761847 p.Cys681Arg missense_variant 0.29
rpoB 761863 p.Ala686Glu missense_variant 0.31
rpoB 761867 c.2061C>T synonymous_variant 0.31
rpoB 761868 p.Asp688Gln missense_variant 0.31
rpoB 761873 c.2067A>G synonymous_variant 0.27
rpoB 761876 c.2070C>G synonymous_variant 0.27
rpoB 761880 p.Ala692Ser missense_variant 0.27
rpoB 761885 c.2079T>C synonymous_variant 0.27
rpoB 761891 c.2085G>C synonymous_variant 0.27
rpoB 761892 p.Ile696Leu missense_variant 0.27
rpoB 761903 c.2097T>C synonymous_variant 0.27
rpoB 761909 c.2103T>C synonymous_variant 0.29
rpoB 761912 c.2106T>C synonymous_variant 0.29
rpoB 761915 p.Asp703Glu missense_variant 0.29
rpoB 761916 p.Asp704Asn missense_variant 0.29
rpoB 761921 c.2115C>T synonymous_variant 0.29
rpoB 761933 c.2127G>C synonymous_variant 0.29
rpoB 761948 c.2142G>C synonymous_variant 0.33
rpoB 761954 c.2148C>G synonymous_variant 0.41
rpoB 761969 p.Glu721Asp missense_variant 0.45
rpoB 761972 c.2166C>T synonymous_variant 0.48
rpoB 761990 c.2184G>C synonymous_variant 0.48
rpoB 762000 c.2194_2195delTCinsAG synonymous_variant 0.45
rpoB 762003 p.Asn733Gln missense_variant 0.45
rpoB 762008 c.2202C>G synonymous_variant 0.45
rpoB 762011 c.2205G>C synonymous_variant 0.5
rpoB 762014 c.2208C>G synonymous_variant 0.48
rpoB 762017 c.2211A>G synonymous_variant 0.48
rpoB 762053 c.2247T>C synonymous_variant 0.62
rpoB 762062 c.2256T>C synonymous_variant 0.62
rpoB 762065 c.2259T>C synonymous_variant 0.62
rpoB 762080 c.2274G>C synonymous_variant 0.6
rpoB 762086 c.2280G>C synonymous_variant 0.6
rpoB 762101 c.2295C>G synonymous_variant 0.6
rpoB 762114 p.Ile770Val missense_variant 0.58
rpoB 762128 c.2322G>C synonymous_variant 0.65
rpoB 762140 c.2334G>C synonymous_variant 0.71
rpoB 762143 c.2337T>C synonymous_variant 0.71
rpoB 762149 c.2343G>C synonymous_variant 0.71
rpoB 762170 c.2364C>G synonymous_variant 0.76
rpoB 762176 c.2370T>C synonymous_variant 0.8
rpoB 762185 c.2379G>C synonymous_variant 0.8
rpoB 762218 c.2412T>C synonymous_variant 0.79
rpoB 762233 c.2427G>C synonymous_variant 0.73
rpoB 762239 c.2433G>A synonymous_variant 0.73
rpoB 762245 c.2439G>T synonymous_variant 0.73
rpoB 762293 c.2487T>C synonymous_variant 0.72
rpoB 762299 c.2493G>C synonymous_variant 0.7
rpoB 762305 c.2499G>C synonymous_variant 0.67
rpoB 762314 c.2508C>T synonymous_variant 0.53
rpoB 762317 c.2511A>G synonymous_variant 0.62
rpoB 762318 p.Ser838Thr missense_variant 0.62
rpoB 762329 c.2523G>C synonymous_variant 0.5
rpoB 762336 p.Ile844Val missense_variant 0.38
rpoB 762341 c.2535G>C synonymous_variant 0.38
rpoB 762344 c.2538G>C synonymous_variant 0.38
rpoB 762347 c.2541T>C synonymous_variant 0.38
rpoB 762348 c.2542_2543delTCinsAG synonymous_variant 0.38
rpoB 762356 p.Glu850Asp missense_variant 0.38
rpoB 762362 p.Glu852Asp missense_variant 0.38
rpoB 762368 p.Glu854Asp missense_variant 0.38
rpoB 762369 c.2563_2565delTTGinsCTC synonymous_variant 0.38
rpoB 762372 p.Pro856Ala missense_variant 0.38
rpoB 762375 p.Ala857Pro missense_variant 0.38
rpoC 762380 c.-990T>C upstream_gene_variant 0.33
rpoC 762392 c.-978G>C upstream_gene_variant 0.33
rpoC 762398 c.-972T>C upstream_gene_variant 0.38
rpoC 762404 c.-966T>C upstream_gene_variant 0.38
rpoC 762407 c.-963G>C upstream_gene_variant 0.5
rpoC 762416 c.-954A>G upstream_gene_variant 0.5
rpoB 762426 p.Ser874Gln missense_variant 0.5
rpoC 762434 c.-936T>C upstream_gene_variant 0.5
rpoC 762443 c.-927G>C upstream_gene_variant 0.5
rpoC 762452 c.-918G>C upstream_gene_variant 0.5
rpoC 762470 c.-900G>C upstream_gene_variant 0.6
rpoC 762488 c.-882G>C upstream_gene_variant 0.67
rpoB 762490 p.Val895Ala missense_variant 0.67
rpoC 762782 c.-588T>C upstream_gene_variant 0.8
rpoB 762785 p.Asp993Glu missense_variant 0.8
rpoB 762789 p.Leu995Met missense_variant 0.8
rpoB 762795 p.Asp997Asn missense_variant 0.8
rpoB 762799 p.Ala998Gly missense_variant 0.8
rpoC 762812 c.-558C>A upstream_gene_variant 0.8
rpoB 762814 p.Met1003Thr missense_variant 0.8
rpoC 762818 c.-552C>G upstream_gene_variant 0.57
rpoC 762827 c.-543G>A upstream_gene_variant 0.57
rpoC 762830 c.-540C>T upstream_gene_variant 0.57
rpoC 762831 c.-539_-538delAGinsTC upstream_gene_variant 0.57
rpoC 762857 c.-513C>G upstream_gene_variant 0.79
rpoB 762858 p.Thr1018Ser missense_variant 0.79
rpoC 762863 c.-507T>G upstream_gene_variant 0.79
rpoB 762881 p.Met1025Ile missense_variant 0.86
rpoC 762887 c.-483G>T upstream_gene_variant 0.78
rpoC 762917 c.-453C>G upstream_gene_variant 0.83
rpoC 762920 c.-450C>T upstream_gene_variant 0.84
rpoC 762929 c.-441G>T upstream_gene_variant 0.89
rpoC 762959 c.-411G>C upstream_gene_variant 0.9
rpoC 762962 c.-408C>T upstream_gene_variant 0.92
rpoC 762983 c.-387C>T upstream_gene_variant 0.8
rpoC 762989 c.-381G>T upstream_gene_variant 0.8
rpoC 762995 c.-375G>T upstream_gene_variant 0.81
rpoC 763028 c.-342T>C upstream_gene_variant 0.83
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763053 c.-317T>C upstream_gene_variant 0.82
rpoC 763067 c.-303C>G upstream_gene_variant 0.82
rpoC 763070 c.-300T>C upstream_gene_variant 0.82
rpoB 763074 p.Thr1090Val missense_variant 0.82
rpoC 763088 c.-282C>G upstream_gene_variant 0.83
rpoC 763115 c.-255T>C upstream_gene_variant 0.87
rpoC 763130 c.-240G>A upstream_gene_variant 0.83
rpoC 763136 c.-234C>T upstream_gene_variant 0.83
rpoC 763160 c.-210G>C upstream_gene_variant 0.6
rpoC 763166 c.-204A>G upstream_gene_variant 0.56
rpoC 763185 c.-185_-183delCTCinsTTG upstream_gene_variant 0.33
rpoB 763282 p.Asn1159Ile missense_variant 0.22
rpoC 763447 c.78C>T synonymous_variant 0.5
rpoC 763456 c.87A>G synonymous_variant 0.8
rpoC 763462 c.93G>C synonymous_variant 0.86
rpoC 763468 c.99G>C synonymous_variant 0.89
rpoC 763486 c.117T>C synonymous_variant 0.85
rpoC 763492 c.123G>C synonymous_variant 0.88
rpoC 763528 c.159G>A synonymous_variant 0.82
rpoC 763546 c.177A>G synonymous_variant 0.85
rpoC 763570 c.201G>C synonymous_variant 0.87
rpoC 763597 c.228G>A synonymous_variant 0.87
rpoC 763609 c.240C>G synonymous_variant 0.86
rpoC 763619 p.Arg84Lys missense_variant 0.79
rpoC 763633 c.264T>C synonymous_variant 0.77
rpoC 763642 c.273G>C synonymous_variant 0.81
rpoC 763648 c.279C>T synonymous_variant 0.81
rpoC 763660 c.291T>G synonymous_variant 0.78
rpoC 763666 c.297G>A synonymous_variant 0.78
rpoC 763669 c.300C>G synonymous_variant 0.76
rpoC 763702 c.333C>G synonymous_variant 0.74
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.74
rpoC 763709 c.340C>T synonymous_variant 0.74
rpoC 763714 c.345G>C synonymous_variant 0.74
rpoC 763717 c.348T>C synonymous_variant 0.74
rpoC 763723 c.354G>C synonymous_variant 0.7
rpoC 763732 c.363C>G synonymous_variant 0.7
rpoC 763741 c.372C>T synonymous_variant 0.7
rpoC 763744 c.375G>C synonymous_variant 0.7
rpoC 763765 c.396T>C synonymous_variant 0.73
rpoC 763781 p.Ser138Ala missense_variant 0.58
rpoC 763792 p.Glu141Asp missense_variant 0.55
rpoC 763796 p.Met143Leu missense_variant 0.55
rpoC 763801 c.432C>G synonymous_variant 0.55
rpoC 763807 c.438T>C synonymous_variant 0.67
rpoC 763819 c.450G>T synonymous_variant 0.5
rpoC 763831 c.462A>G synonymous_variant 0.4
rpoC 763884 p.Ala172Val missense_variant 1.0
rpoC 763886 c.517C>A synonymous_variant 1.0
rpoC 764153 p.Gln262Lys missense_variant 0.25
rpoC 764161 c.792G>C synonymous_variant 0.25
rpoC 764162 p.Ile265Leu missense_variant 0.25
rpoC 764169 p.Asn267Thr missense_variant 0.33
rpoC 764182 c.813C>T synonymous_variant 0.45
rpoC 764188 c.819A>G synonymous_variant 0.64
rpoC 764194 p.Glu275Asp missense_variant 0.5
rpoC 764203 c.834G>C synonymous_variant 0.5
rpoC 764206 c.837T>C synonymous_variant 0.5
rpoC 764207 p.Val280Thr missense_variant 0.5
rpoC 764215 c.846A>C synonymous_variant 0.5
rpoC 764227 c.858G>C synonymous_variant 0.64
rpoC 764239 c.870T>G synonymous_variant 0.71
rpoC 764242 c.873C>T synonymous_variant 0.71
rpoC 764245 c.876C>G synonymous_variant 0.71
rpoC 764254 c.885G>A synonymous_variant 0.62
rpoC 764257 c.888G>C synonymous_variant 0.62
rpoC 764263 c.894G>C synonymous_variant 0.65
rpoC 764266 c.897T>G synonymous_variant 0.69
rpoC 764269 c.900G>C synonymous_variant 0.69
rpoC 764278 c.909A>G synonymous_variant 0.72
rpoC 764284 c.915G>C synonymous_variant 0.76
rpoC 764290 c.921C>T synonymous_variant 0.78
rpoC 764297 p.Met310Leu missense_variant 0.79
rpoC 764320 c.951C>G synonymous_variant 0.83
rpoC 764329 c.960C>T synonymous_variant 0.83
rpoC 764341 c.972G>T synonymous_variant 0.83
rpoC 764344 c.975C>T synonymous_variant 0.77
rpoC 764365 c.996C>T synonymous_variant 0.79
rpoC 764371 c.1002G>C synonymous_variant 0.79
rpoC 764377 c.1008C>G synonymous_variant 0.79
rpoC 764380 c.1011G>C synonymous_variant 0.77
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.76
rpoC 764396 c.1027C>T synonymous_variant 0.68
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.71
rpoC 764410 c.1041G>C synonymous_variant 0.71
rpoC 764428 c.1059G>C synonymous_variant 0.65
rpoC 764431 c.1062G>C synonymous_variant 0.65
rpoC 764434 c.1065A>G synonymous_variant 0.65
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.68
rpoC 764449 c.1080G>C synonymous_variant 0.62
rpoC 764455 c.1086G>T synonymous_variant 0.67
rpoC 764458 c.1089G>C synonymous_variant 0.67
rpoC 764461 c.1092A>G synonymous_variant 0.68
rpoC 764470 c.1101C>G synonymous_variant 0.69
rpoC 764497 c.1128A>G synonymous_variant 0.75
rpoC 764500 c.1131C>G synonymous_variant 0.78
rpoC 764506 c.1137C>T synonymous_variant 0.76
rpoC 764509 c.1140G>C synonymous_variant 0.77
rpoC 764521 c.1152T>C synonymous_variant 0.8
rpoC 764524 c.1155C>T synonymous_variant 0.8
rpoC 764527 c.1158C>T synonymous_variant 0.81
rpoC 764536 c.1167G>T synonymous_variant 0.81
rpoC 764539 c.1170C>G synonymous_variant 0.91
rpoC 764548 c.1179G>A synonymous_variant 0.81
rpoC 764554 c.1185C>T synonymous_variant 0.8
rpoC 764560 c.1191T>C synonymous_variant 0.81
rpoC 764566 c.1197C>G synonymous_variant 0.75
rpoC 764575 c.1206T>G synonymous_variant 0.74
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.74
rpoC 764602 c.1233C>T synonymous_variant 0.75
rpoC 764605 c.1236G>T synonymous_variant 0.75
rpoC 764611 c.1242G>T synonymous_variant 0.75
rpoC 764632 c.1263T>C synonymous_variant 0.74
rpoC 764650 c.1281G>T synonymous_variant 0.8
rpoC 764662 c.1293G>C synonymous_variant 0.83
rpoC 764701 c.1332C>G synonymous_variant 0.89
rpoC 764716 c.1347G>C synonymous_variant 0.91
rpoC 764746 c.1377G>T synonymous_variant 0.9
rpoC 764749 c.1380G>C synonymous_variant 0.9
rpoC 764752 c.1383G>C synonymous_variant 0.9
rpoC 764755 c.1386C>T synonymous_variant 0.9
rpoC 764764 p.His465Gln missense_variant 0.87
rpoC 764780 c.1411_1412delAGinsTC synonymous_variant 0.87
rpoC 764791 c.1422C>G synonymous_variant 0.88
rpoC 764803 c.1434C>T synonymous_variant 0.92
rpoC 764809 c.1440C>T synonymous_variant 0.92
rpoC 764824 c.1455T>C synonymous_variant 0.93
rpoC 764827 c.1458G>C synonymous_variant 0.93
rpoC 764858 c.1489T>C synonymous_variant 0.93
rpoC 764869 c.1500C>T synonymous_variant 0.9
rpoC 764872 c.1503A>T synonymous_variant 0.9
rpoC 764875 c.1506C>T synonymous_variant 0.9
rpoC 764887 c.1518G>T synonymous_variant 0.84
rpoC 764888 c.1519T>C synonymous_variant 0.84
rpoC 764893 c.1524T>C synonymous_variant 0.83
rpoC 764908 c.1539G>A synonymous_variant 0.83
rpoC 764911 c.1542A>G synonymous_variant 0.82
rpoC 764912 p.Met515Gln missense_variant 0.82
rpoC 764923 c.1554A>G synonymous_variant 0.83
rpoC 764948 c.1579T>C synonymous_variant 0.84
rpoC 764968 c.1599T>C synonymous_variant 0.78
rpoC 765004 c.1635G>C synonymous_variant 0.69
rpoC 765007 c.1638T>G synonymous_variant 0.69
rpoC 765008 c.1639T>C synonymous_variant 0.69
rpoC 765013 c.1644C>T synonymous_variant 0.69
rpoC 765016 c.1647C>G synonymous_variant 0.69
rpoC 765019 c.1650A>G synonymous_variant 0.69
rpoC 765034 c.1665T>G synonymous_variant 0.67
rpoC 765040 c.1671T>C synonymous_variant 0.69
rpoC 765041 c.1672T>C synonymous_variant 0.69
rpoC 765047 c.1678T>C synonymous_variant 0.69
rpoC 765052 c.1683C>G synonymous_variant 0.69
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.69
rpoC 765076 c.1707A>G synonymous_variant 0.71
rpoC 765079 c.1710T>G synonymous_variant 0.7
rpoC 765082 c.1713G>C synonymous_variant 0.7
rpoC 765089 c.1720T>C synonymous_variant 0.7
rpoC 765103 c.1734G>T synonymous_variant 0.7
rpoC 765121 c.1752G>C synonymous_variant 0.6
rpoC 765826 c.2457T>C synonymous_variant 0.36
rpoC 765835 c.2466C>T synonymous_variant 0.4
rpoC 765874 c.2505G>C synonymous_variant 0.36
rpoC 765875 p.Val836Ile missense_variant 0.36
rpoC 765886 c.2517C>G synonymous_variant 0.36
rpoC 765892 c.2523T>C synonymous_variant 0.36
rpoC 765908 p.Leu847Ala missense_variant 0.33
rpoC 765928 c.2559C>G synonymous_variant 0.29
rpoC 765937 c.2568T>C synonymous_variant 0.29
rpoC 765940 c.2571A>C synonymous_variant 0.29
rpoC 765946 c.2577C>T synonymous_variant 0.29
rpoC 765947 c.2578T>C synonymous_variant 0.29
rpoC 765952 c.2583G>C synonymous_variant 0.29
rpoC 765962 c.2593T>C synonymous_variant 0.29
rpoC 765967 c.2598C>T synonymous_variant 0.29
rpoC 765979 c.2610C>G synonymous_variant 0.29
rpoC 765982 c.2613C>T synonymous_variant 0.25
rpoC 765994 c.2625A>T synonymous_variant 0.25
rpoC 766255 c.2886G>C synonymous_variant 0.4
rpoC 766258 c.2889T>C synonymous_variant 0.4
rpoC 766267 c.2898G>C synonymous_variant 0.6
rpoC 766270 c.2901G>C synonymous_variant 0.6
rpoC 766280 p.Ser971Gly missense_variant 0.71
rpoC 766288 c.2919C>T synonymous_variant 0.83
rpoC 766298 p.Thr977His missense_variant 0.88
rpoC 766309 c.2940G>C synonymous_variant 0.7
rpoC 766315 c.2946C>G synonymous_variant 0.7
rpoC 766333 c.2964G>C synonymous_variant 0.77
rpoC 766345 c.2976T>C synonymous_variant 0.85
rpoC 766348 c.2979A>G synonymous_variant 0.85
rpoC 766357 c.2988C>T synonymous_variant 0.85
rpoC 766361 p.Val998Ile missense_variant 0.85
rpoC 766366 c.2997C>G synonymous_variant 0.85
rpoC 766375 c.3006C>G synonymous_variant 0.88
rpoC 766381 c.3012C>T synonymous_variant 0.88
rpoC 766384 c.3015A>G synonymous_variant 0.88
rpoC 766390 c.3021C>T synonymous_variant 0.8
rpoC 766402 c.3033C>G synonymous_variant 0.8
rpoC 766408 c.3039C>T synonymous_variant 0.82
rpoC 766411 c.3042C>G synonymous_variant 0.82
rpoC 766435 p.Glu1022Asp missense_variant 0.81
rpoC 766456 c.3087C>G synonymous_variant 0.76
rpoC 766459 c.3090G>T synonymous_variant 0.76
rpoC 766462 c.3093G>C synonymous_variant 0.76
rpoC 766471 c.3102G>C synonymous_variant 0.75
rpoC 766480 c.3111C>T synonymous_variant 0.63
rpoC 766483 c.3114G>C synonymous_variant 0.63
rpoC 766486 c.3117A>G synonymous_variant 0.63
rpoC 766488 c.3120_3125delGCGTGG disruptive_inframe_deletion 0.63
rpoC 766498 c.3130_3131insGTGTCG disruptive_inframe_insertion 0.63
rpoC 766510 c.3141C>G synonymous_variant 0.62
rpoC 766513 p.Asp1048Glu missense_variant 0.62
rpoC 766517 p.Thr1050Ser missense_variant 0.62
rpoC 766528 c.3159T>G synonymous_variant 0.68
rpoC 766531 c.3162G>C synonymous_variant 0.68
rpoC 766534 c.3165C>G synonymous_variant 0.68
rpoC 766542 p.Gly1058Asp missense_variant 0.68
rpoC 766546 p.Glu1059Asp missense_variant 0.73
rpoC 766549 c.3180G>C synonymous_variant 0.73
rpoC 766570 c.3201T>C synonymous_variant 0.68
rpoC 766573 c.3204T>C synonymous_variant 0.68
rpoC 766582 c.3213C>T synonymous_variant 0.67
rpoC 766583 p.Gly1072Ser missense_variant 0.65
rpoC 766588 c.3219G>A synonymous_variant 0.65
rpoC 766598 p.Tyr1077Ile missense_variant 0.67
rpoC 766618 c.3249G>T synonymous_variant 0.8
rpoC 766624 c.3255G>T synonymous_variant 0.8
rpoC 766630 c.3261G>T synonymous_variant 0.78
rpoC 766633 c.3264G>C synonymous_variant 0.78
rpoC 766645 p.Glu1092Asp missense_variant 0.73
rpoC 766651 c.3282T>C synonymous_variant 0.71
rpoC 766654 c.3285C>G synonymous_variant 0.71
rpoC 766657 c.3288A>G synonymous_variant 0.71
rpoC 766660 c.3291G>T synonymous_variant 0.71
rpoC 766661 p.Val1098Leu missense_variant 0.71
rpoC 766672 c.3303T>C synonymous_variant 0.74
rpoC 766684 c.3315C>G synonymous_variant 0.73
rpoC 766690 c.3321G>C synonymous_variant 0.67
rpoC 766693 c.3324C>T synonymous_variant 0.67
rpoC 766702 c.3333G>C synonymous_variant 0.67
rpoC 766708 c.3339A>G synonymous_variant 0.63
rpoC 766718 p.Asp1117Asn missense_variant 0.69
rpoC 766726 c.3357T>C synonymous_variant 0.75
rpoC 766738 c.3369G>C synonymous_variant 0.75
rpoC 766742 p.Gln1125Met missense_variant 0.82
rpoC 766747 c.3378C>T synonymous_variant 0.82
rpoC 766753 c.3384C>T synonymous_variant 0.82
rpoC 766754 p.Glu1129Gln missense_variant 0.82
rpoC 766763 p.Ile1132Val missense_variant 0.82
rpoC 766774 c.3405T>C synonymous_variant 0.82
rpoC 766775 p.Arg1136Asn missense_variant 0.82
rpoC 766799 p.Ala1144Ser missense_variant 0.68
rpoC 766804 c.3435A>G synonymous_variant 0.74
rpoC 766835 p.Val1156Thr missense_variant 0.58
rpoC 766843 c.3474T>G synonymous_variant 0.58
rpoC 766846 c.3477C>G synonymous_variant 0.54
rpoC 766858 c.3489C>T synonymous_variant 0.54
rpoC 766861 c.3492G>C synonymous_variant 0.54
rpoC 766867 c.3498C>G synonymous_variant 0.54
rpoC 766876 c.3507C>T synonymous_variant 0.5
rpoC 766877 p.Ser1170His missense_variant 0.5
rpoC 766882 c.3513C>T synonymous_variant 0.5
rpoC 766894 c.3525T>C synonymous_variant 0.5
rpoC 766895 c.3526T>C synonymous_variant 0.5
rpoC 766900 c.3531T>C synonymous_variant 0.5
rpoC 766903 c.3534C>T synonymous_variant 0.5
rpoC 766910 p.Ile1181Val missense_variant 0.5
rpoC 766915 p.Asp1182Glu missense_variant 0.5
rpoC 766918 c.3549C>T synonymous_variant 0.5
rpoC 766921 c.3552G>C synonymous_variant 0.5
rpoC 766933 c.3564A>G synonymous_variant 0.5
rpoC 766935 p.Glu1189Ala missense_variant 0.5
rpoC 766942 c.3573C>T synonymous_variant 0.55
rpoC 766944 p.Arg1192Gln missense_variant 0.55
rpoC 766948 c.3579G>C synonymous_variant 0.55
rpoC 766951 c.3582G>C synonymous_variant 0.64
rpoC 766963 c.3594T>C synonymous_variant 0.69
rpoC 766969 c.3600C>G synonymous_variant 0.77
rpoC 766972 c.3603G>A synonymous_variant 0.77
rpoC 766978 c.3609C>A synonymous_variant 0.79
rpoC 766996 c.3627C>T synonymous_variant 0.83
rpoC 767002 c.3633G>C synonymous_variant 0.82
rpoC 767008 c.3639G>A synonymous_variant 0.84
rpoC 767017 c.3648C>G synonymous_variant 0.84
rpoC 767023 p.Asp1218Glu missense_variant 0.88
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.88
rpoC 767059 c.3690T>G synonymous_variant 0.77
rpoC 767062 c.3693C>T synonymous_variant 0.77
rpoC 767065 c.3696G>C synonymous_variant 0.77
rpoC 767074 c.3705T>C synonymous_variant 0.76
rpoC 767080 c.3711G>C synonymous_variant 0.76
rpoC 767087 p.Cys1240Ser missense_variant 0.76
rpoC 767098 c.3729T>C synonymous_variant 0.72
rpoC 767104 c.3735C>G synonymous_variant 0.71
rpoC 767106 p.Asn1246Ile missense_variant 0.71
rpoC 767119 c.3750A>G synonymous_variant 0.67
rpoC 767134 c.3765C>T synonymous_variant 0.64
rpoC 767138 c.3769C>T synonymous_variant 0.64
rpoC 767158 c.3789T>C synonymous_variant 0.76
rpoC 767167 c.3798C>G synonymous_variant 0.73
rpoC 767180 p.Ala1271Gln missense_variant 0.5
rpoC 767185 c.3816G>C synonymous_variant 0.5
rpoC 767191 c.3822C>G synonymous_variant 0.5
rpoC 767203 c.3834C>G synonymous_variant 0.4
rpoC 767206 c.3837C>T synonymous_variant 0.33
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 777323 c.1158C>A synonymous_variant 0.67
mmpL5 777907 p.Leu192Val missense_variant 0.5
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.25
rpsL 781631 c.72G>C synonymous_variant 0.25
rpsL 781652 c.93T>C synonymous_variant 0.36
rpsL 781655 c.96T>C synonymous_variant 0.36
rpsL 781658 c.99A>G synonymous_variant 0.47
rpsL 781664 c.105C>G synonymous_variant 0.47
rpsL 781670 c.111G>C synonymous_variant 0.62
rpsL 781682 c.123T>C synonymous_variant 0.68
rpsL 781685 c.126G>T synonymous_variant 0.68
rpsL 781706 c.147T>G synonymous_variant 0.65
rpsL 781709 c.150G>C synonymous_variant 0.65
rpsL 781715 c.156T>C synonymous_variant 0.65
rpsL 781721 c.162C>T synonymous_variant 0.65
rpsL 781725 p.Lys56Arg missense_variant 0.65
rpsL 781728 c.169T>C synonymous_variant 0.65
rpsL 781733 c.174G>C synonymous_variant 0.65
rpsL 781736 c.177T>C synonymous_variant 0.65
rpsL 781737 p.Gln60Ser missense_variant 0.65
rpsL 781751 c.192G>C synonymous_variant 0.68
rpsL 781754 c.195G>C synonymous_variant 0.65
rpsL 781760 c.201T>C synonymous_variant 0.65
rpsL 781766 c.207C>T synonymous_variant 0.6
rpsL 781772 c.213C>T synonymous_variant 0.61
rpsL 781802 c.243G>C synonymous_variant 0.5
rpsL 781805 c.246G>C synonymous_variant 0.5
rpsL 781814 c.255C>T synonymous_variant 0.48
rpsL 781817 c.258G>T synonymous_variant 0.48
rpsL 781829 c.270G>C synonymous_variant 0.48
rpsL 781832 c.273T>G synonymous_variant 0.48
rpsL 781841 c.282C>T synonymous_variant 0.39
rpsL 781859 c.300T>G synonymous_variant 0.39
rpsL 781865 c.306G>C synonymous_variant 0.39
rpsL 781868 c.309T>C synonymous_variant 0.39
rpsL 781871 c.312G>C synonymous_variant 0.39
rpsL 781884 p.Asn109Asp missense_variant 0.41
rpsL 781892 c.333A>G synonymous_variant 0.38
rpsL 781898 c.339A>C synonymous_variant 0.27
rpsL 781907 c.348T>C synonymous_variant 0.2
rpsL 781916 c.357T>C synonymous_variant 0.2
rplC 800610 c.-199_-197delCTAinsTTG upstream_gene_variant 0.41
rplC 800615 c.-194G>C upstream_gene_variant 0.41
rplC 800618 c.-191T>C upstream_gene_variant 0.41
rplC 800633 c.-176T>C upstream_gene_variant 0.37
rplC 800645 c.-164C>T upstream_gene_variant 0.29
rplC 800648 c.-161A>G upstream_gene_variant 0.33
rplC 800654 c.-155T>C upstream_gene_variant 0.29
rplC 800667 c.-142T>A upstream_gene_variant 0.18
rplC 800672 c.-137G>C upstream_gene_variant 0.18
rplC 800690 c.-119C>T upstream_gene_variant 0.21
rplC 800693 c.-116A>C upstream_gene_variant 0.21
Rv1258c 1406103 p.Arg413Leu missense_variant 0.5
Rv1258c 1406312 c.1029T>C synonymous_variant 1.0
atpE 1460907 c.-138T>C upstream_gene_variant 0.88
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.38
rrs 1471929 n.84C>G non_coding_transcript_exon_variant 0.38
rrs 1471930 n.85G>C non_coding_transcript_exon_variant 0.38
rrs 1471931 n.86G>T non_coding_transcript_exon_variant 0.38
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.38
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.38
rrs 1471979 n.134T>C non_coding_transcript_exon_variant 0.7
rrs 1471980 n.135G>T non_coding_transcript_exon_variant 0.7
rrs 1471981 n.136C>G non_coding_transcript_exon_variant 0.71
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.71
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.68
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.52
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.54
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.52
rrs 1472044 n.199G>T non_coding_transcript_exon_variant 0.54
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.59
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.6
rrs 1472067 n.222G>T non_coding_transcript_exon_variant 0.67
rrs 1472068 n.223T>G non_coding_transcript_exon_variant 0.68
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.83
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.88
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.88
rrs 1472137 n.292G>A non_coding_transcript_exon_variant 0.85
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.86
rrs 1472151 n.306C>T non_coding_transcript_exon_variant 0.86
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.91
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.82
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.77
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.77
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.78
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.79
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.79
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.88
rrs 1472435 n.590T>C non_coding_transcript_exon_variant 0.88
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.82
rrs 1472439 n.594C>T non_coding_transcript_exon_variant 0.82
rrs 1472445 n.601dupT non_coding_transcript_exon_variant 0.82
rrs 1472463 n.618G>A non_coding_transcript_exon_variant 0.83
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.85
rrs 1472471 n.626G>A non_coding_transcript_exon_variant 0.85
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.86
rrs 1472497 n.652G>A non_coding_transcript_exon_variant 0.88
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.84
rrs 1472580 n.735C>T non_coding_transcript_exon_variant 0.87
rrs 1472612 n.767G>T non_coding_transcript_exon_variant 0.88
rrs 1472673 n.828T>G non_coding_transcript_exon_variant 0.88
rrs 1472674 n.829T>C non_coding_transcript_exon_variant 0.88
rrs 1472677 n.832C>A non_coding_transcript_exon_variant 0.88
rrs 1472680 n.835C>T non_coding_transcript_exon_variant 0.88
rrs 1472682 n.837T>A non_coding_transcript_exon_variant 0.88
rrs 1472683 n.838T>C non_coding_transcript_exon_variant 0.88
rrs 1472685 n.840G>A non_coding_transcript_exon_variant 0.88
rrs 1472687 n.842A>T non_coding_transcript_exon_variant 0.86
rrs 1472836 n.991G>A non_coding_transcript_exon_variant 0.83
rrs 1472840 n.995A>C non_coding_transcript_exon_variant 0.82
rrs 1472841 n.996G>A non_coding_transcript_exon_variant 0.82
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.79
rrs 1472859 n.1014G>T non_coding_transcript_exon_variant 0.78
rrs 1472873 n.1028C>T non_coding_transcript_exon_variant 0.77
rrs 1472874 n.1029C>T non_coding_transcript_exon_variant 0.76
rrs 1472875 n.1030T>G non_coding_transcript_exon_variant 0.8
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.81
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.84
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.84
rrs 1472958 n.1113A>G non_coding_transcript_exon_variant 0.84
rrs 1472960 n.1115G>A non_coding_transcript_exon_variant 0.84
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.84
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.84
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.84
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.87
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.89
rrs 1472986 n.1141C>T non_coding_transcript_exon_variant 0.89
rrs 1472988 n.1143T>C non_coding_transcript_exon_variant 0.89
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.89
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.89
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.89
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.88
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.88
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.91
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.88
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.81
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.86
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.89
rrl 1473694 n.37C>T non_coding_transcript_exon_variant 0.38
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 0.38
rrl 1473698 n.41G>A non_coding_transcript_exon_variant 0.38
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 0.38
rrl 1473719 n.62G>T non_coding_transcript_exon_variant 0.57
rrl 1473724 n.67T>C non_coding_transcript_exon_variant 0.67
rrl 1473731 n.74T>G non_coding_transcript_exon_variant 0.75
rrl 1473732 n.75G>T non_coding_transcript_exon_variant 0.67
rrl 1473743 n.86C>T non_coding_transcript_exon_variant 0.73
rrl 1473750 n.93C>A non_coding_transcript_exon_variant 0.73
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 0.73
rrl 1473757 n.100T>G non_coding_transcript_exon_variant 0.73
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.73
rrl 1473768 n.111A>G non_coding_transcript_exon_variant 0.79
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.79
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.82
rrl 1473811 n.154C>A non_coding_transcript_exon_variant 0.86
rrl 1473812 n.155G>C non_coding_transcript_exon_variant 0.86
rrl 1473814 n.157A>C non_coding_transcript_exon_variant 0.86
rrl 1473815 n.158T>A non_coding_transcript_exon_variant 0.86
rrl 1473816 n.159C>G non_coding_transcript_exon_variant 0.86
rrl 1473822 n.165A>G non_coding_transcript_exon_variant 0.75
rrl 1473835 n.179delA non_coding_transcript_exon_variant 0.75
rrl 1473844 n.187C>T non_coding_transcript_exon_variant 0.78
rrl 1473870 n.213G>A non_coding_transcript_exon_variant 0.82
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.8
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.82
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.82
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.79
rrl 1473922 n.265A>G non_coding_transcript_exon_variant 0.79
rrl 1473923 n.266C>G non_coding_transcript_exon_variant 0.79
rrl 1473934 n.277G>A non_coding_transcript_exon_variant 0.75
rrl 1473935 n.278C>T non_coding_transcript_exon_variant 0.75
rrl 1473936 n.279A>G non_coding_transcript_exon_variant 0.75
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.75
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.75
rrl 1473946 n.289A>G non_coding_transcript_exon_variant 0.75
rrl 1473968 n.311C>T non_coding_transcript_exon_variant 0.44
rrl 1474074 n.417C>T non_coding_transcript_exon_variant 0.25
rrl 1474130 n.473C>T non_coding_transcript_exon_variant 0.55
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.55
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.54
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.69
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.69
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.69
rrl 1474184 n.527C>T non_coding_transcript_exon_variant 0.69
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.69
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.75
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.86
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.85
rrl 1474264 n.607T>G non_coding_transcript_exon_variant 0.82
rrl 1474265 n.608G>A non_coding_transcript_exon_variant 0.82
rrl 1474266 n.609T>C non_coding_transcript_exon_variant 0.82
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.82
rrl 1474303 n.646A>T non_coding_transcript_exon_variant 0.64
rrl 1474306 n.649A>C non_coding_transcript_exon_variant 0.64
rrl 1474307 n.650G>T non_coding_transcript_exon_variant 0.58
rrl 1474310 n.655dupG non_coding_transcript_exon_variant 0.58
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 0.67
rrl 1474351 n.694G>T non_coding_transcript_exon_variant 0.64
rrl 1474353 n.696A>C non_coding_transcript_exon_variant 0.64
rrl 1474354 n.697C>T non_coding_transcript_exon_variant 0.64
rrl 1474355 n.698A>C non_coding_transcript_exon_variant 0.64
rrl 1474356 n.699T>G non_coding_transcript_exon_variant 0.64
rrl 1474359 n.702C>G non_coding_transcript_exon_variant 0.64
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.69
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 0.82
rrl 1474444 n.787G>C non_coding_transcript_exon_variant 0.44
rrl 1474447 n.790G>T non_coding_transcript_exon_variant 0.5
rrl 1474448 n.791T>G non_coding_transcript_exon_variant 0.5
rrl 1474450 n.793T>G non_coding_transcript_exon_variant 0.4
rrl 1474454 n.797G>A non_coding_transcript_exon_variant 0.4
rrl 1474496 n.839C>T non_coding_transcript_exon_variant 0.71
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.72
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.72
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 0.72
rrl 1474529 n.872A>C non_coding_transcript_exon_variant 0.7
rrl 1474530 n.873G>A non_coding_transcript_exon_variant 0.7
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 0.72
rrl 1474539 n.882C>T non_coding_transcript_exon_variant 0.72
rrl 1474540 n.883T>G non_coding_transcript_exon_variant 0.73
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.76
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.72
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.71
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.71
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.71
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 1.0
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 0.76
rrl 1474717 n.1060_1061insGTGAG non_coding_transcript_exon_variant 0.74
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 0.77
rrl 1474740 n.1083G>C non_coding_transcript_exon_variant 0.76
rrl 1474747 n.1090C>G non_coding_transcript_exon_variant 0.76
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 0.76
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 0.79
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.77
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.77
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.7
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.68
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 0.65
rrl 1474824 n.1167A>G non_coding_transcript_exon_variant 0.65
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.65
rrl 1474903 n.1246T>C non_coding_transcript_exon_variant 0.36
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 0.36
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.36
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.33
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 0.6
rrl 1475059 n.1404_1405delCA non_coding_transcript_exon_variant 0.75
rrl 1475064 n.1407G>A non_coding_transcript_exon_variant 0.75
rrl 1475067 n.1410_1411insG non_coding_transcript_exon_variant 0.75
rrl 1475076 n.1419C>A non_coding_transcript_exon_variant 0.75
rrl 1475079 n.1422T>C non_coding_transcript_exon_variant 0.75
rrl 1475080 n.1423G>T non_coding_transcript_exon_variant 0.75
rrl 1475081 n.1424C>G non_coding_transcript_exon_variant 0.75
rrl 1475090 n.1433A>T non_coding_transcript_exon_variant 0.77
rrl 1475114 n.1457C>T non_coding_transcript_exon_variant 0.73
rrl 1475116 n.1459G>A non_coding_transcript_exon_variant 0.73
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.78
rrl 1475201 n.1544G>C non_coding_transcript_exon_variant 0.78
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 0.78
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 0.78
rrl 1475212 n.1555A>C non_coding_transcript_exon_variant 0.78
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.78
rrl 1475221 n.1564C>T non_coding_transcript_exon_variant 0.78
rrl 1475222 n.1565G>T non_coding_transcript_exon_variant 0.78
rrl 1475246 n.1589C>G non_coding_transcript_exon_variant 0.75
rrl 1475251 n.1596_1599delTCCC non_coding_transcript_exon_variant 0.75
rrl 1475264 n.1607G>T non_coding_transcript_exon_variant 0.75
rrl 1475266 n.1609T>A non_coding_transcript_exon_variant 0.75
rrl 1475267 n.1610G>C non_coding_transcript_exon_variant 0.75
rrl 1475268 n.1611T>C non_coding_transcript_exon_variant 0.75
rrl 1475271 n.1615_1618delGTTC non_coding_transcript_exon_variant 0.75
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.75
rrl 1475294 n.1637T>C non_coding_transcript_exon_variant 0.75
rrl 1475295 n.1638C>G non_coding_transcript_exon_variant 0.71
rrl 1475307 n.1650T>G non_coding_transcript_exon_variant 0.75
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.75
rrl 1475443 n.1786G>C non_coding_transcript_exon_variant 1.0
rrl 1475444 n.1787G>A non_coding_transcript_exon_variant 1.0
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 1.0
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 1.0
rrl 1475475 n.1818C>T non_coding_transcript_exon_variant 1.0
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 1.0
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 1.0
rrl 1475481 n.1824C>G non_coding_transcript_exon_variant 1.0
rrl 1475482 n.1825A>G non_coding_transcript_exon_variant 1.0
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 1.0
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 1.0
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.93
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.86
rrl 1475538 n.1881T>A non_coding_transcript_exon_variant 0.86
rrl 1475539 n.1882A>T non_coding_transcript_exon_variant 0.86
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.82
rrl 1475550 n.1893A>G non_coding_transcript_exon_variant 0.85
rrl 1475607 n.1950A>C non_coding_transcript_exon_variant 0.84
rrl 1475609 n.1952C>G non_coding_transcript_exon_variant 0.82
rrl 1475614 n.1957A>C non_coding_transcript_exon_variant 0.82
rrl 1475615 n.1958C>G non_coding_transcript_exon_variant 0.82
rrl 1475616 n.1959A>G non_coding_transcript_exon_variant 0.82
rrl 1475627 n.1970G>C non_coding_transcript_exon_variant 0.82
rrl 1475628 n.1971G>T non_coding_transcript_exon_variant 0.82
rrl 1475633 n.1976G>T non_coding_transcript_exon_variant 0.79
rrl 1475636 n.1979A>T non_coding_transcript_exon_variant 0.77
rrl 1475637 n.1980T>G non_coding_transcript_exon_variant 0.77
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.77
rrl 1475639 n.1982C>G non_coding_transcript_exon_variant 0.77
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 0.81
rrl 1475655 n.1998T>A non_coding_transcript_exon_variant 0.83
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.83
rrl 1475699 n.2042C>T non_coding_transcript_exon_variant 0.89
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 0.84
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.84
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.84
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.84
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.84
rrl 1475769 n.2113_2114insCG non_coding_transcript_exon_variant 0.84
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.84
rrl 1475883 n.2226A>T non_coding_transcript_exon_variant 0.82
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.82
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.82
rrl 1475916 n.2259C>G non_coding_transcript_exon_variant 0.85
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.86
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.85
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.86
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.88
rrl 1476029 n.2373_2377delACCTC non_coding_transcript_exon_variant 0.9
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.97
rrl 1476088 n.2431A>T non_coding_transcript_exon_variant 0.97
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.95
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 0.95
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.96
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.96
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 0.89
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 0.89
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.89
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.92
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.92
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.92
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.9
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.9
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.91
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.9
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.91
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 0.91
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 0.91
rrl 1476300 n.2643G>A non_coding_transcript_exon_variant 0.91
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 0.94
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.92
rrl 1476524 n.2867C>T non_coding_transcript_exon_variant 0.93
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.91
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 0.91
rrl 1476608 n.2951C>T non_coding_transcript_exon_variant 0.89
rrl 1476614 n.2957A>T non_coding_transcript_exon_variant 0.89
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.88
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.88
rrl 1476629 n.2972C>A non_coding_transcript_exon_variant 0.87
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 0.87
rrl 1476661 n.3004A>G non_coding_transcript_exon_variant 0.78
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 0.73
rrl 1476666 n.3009C>T non_coding_transcript_exon_variant 0.73
rrl 1476675 n.3018C>G non_coding_transcript_exon_variant 0.56
rpsA 1833586 c.45C>T synonymous_variant 0.46
rpsA 1833589 c.48A>C synonymous_variant 0.46
rpsA 1833595 c.54T>G synonymous_variant 0.46
rpsA 1833596 p.Ser19Ala missense_variant 0.46
rpsA 1833616 c.75A>C synonymous_variant 0.67
rpsA 1833619 c.78A>C synonymous_variant 0.67
rpsA 1833623 p.Lys28Ser missense_variant 0.67
rpsA 1833658 c.117C>G synonymous_variant 0.63
rpsA 1833664 c.123C>A synonymous_variant 0.68
rpsA 1833676 c.135A>G synonymous_variant 0.67
rpsA 1833679 c.138G>C synonymous_variant 0.67
rpsA 1833682 c.141C>T synonymous_variant 0.67
rpsA 1833694 c.153G>T synonymous_variant 0.7
rpsA 1833697 c.156C>G synonymous_variant 0.7
rpsA 1833709 c.168C>T synonymous_variant 0.71
rpsA 1833727 c.186G>C synonymous_variant 0.71
rpsA 1833733 c.192C>T synonymous_variant 0.71
rpsA 1833734 p.Ala65Ser missense_variant 0.68
rpsA 1833739 c.198C>T synonymous_variant 0.69
rpsA 1833748 c.207C>G synonymous_variant 0.72
rpsA 1833763 c.222C>G synonymous_variant 0.69
rpsA 1833781 c.240T>C synonymous_variant 0.69
rpsA 1833782 p.Ser81Asn missense_variant 0.69
rpsA 1833802 c.261A>G synonymous_variant 0.69
rpsA 1833811 c.270G>C synonymous_variant 0.7
rpsA 1833829 c.288A>G synonymous_variant 0.74
rpsA 1833832 c.291G>A synonymous_variant 0.74
rpsA 1833838 c.297G>C synonymous_variant 0.74
rpsA 1833841 c.300C>G synonymous_variant 0.74
rpsA 1833847 c.306C>G synonymous_variant 0.74
rpsA 1833856 c.315A>G synonymous_variant 0.74
rpsA 1833862 c.321G>A synonymous_variant 0.73
rpsA 1833874 c.333T>C synonymous_variant 0.76
rpsA 1833877 c.336C>T synonymous_variant 0.77
rpsA 1833894 p.Ala118Glu missense_variant 0.85
rpsA 1833928 c.387G>C synonymous_variant 0.87
rpsA 1833949 c.408T>C synonymous_variant 0.83
rpsA 1833961 c.420C>G synonymous_variant 0.82
rpsA 1833970 c.429G>C synonymous_variant 0.8
rpsA 1833976 c.435C>T synonymous_variant 0.77
rpsA 1833979 c.438T>C synonymous_variant 0.77
rpsA 1833985 c.444G>C synonymous_variant 0.75
rpsA 1833988 c.447C>G synonymous_variant 0.75
rpsA 1833991 c.450C>G synonymous_variant 0.75
rpsA 1834009 c.468C>T synonymous_variant 0.69
rpsA 1834012 c.471G>C synonymous_variant 0.68
rpsA 1834021 c.480C>T synonymous_variant 0.7
rpsA 1834030 c.489C>G synonymous_variant 0.68
rpsA 1834066 c.525G>A synonymous_variant 0.57
rpsA 1834069 c.528G>C synonymous_variant 0.54
rpsA 1834096 c.555G>C synonymous_variant 0.56
rpsA 1834099 c.558C>G synonymous_variant 0.56
rpsA 1834102 c.561T>C synonymous_variant 0.56
rpsA 1834108 c.567C>G synonymous_variant 0.6
rpsA 1834151 p.Asn204His missense_variant 0.58
rpsA 1834154 p.Asn205Gln missense_variant 0.62
rpsA 1834157 c.616_618delTTGinsCTC synonymous_variant 0.62
rpsA 1834162 c.621A>G synonymous_variant 0.62
rpsA 1834165 c.624A>G synonymous_variant 0.62
rpsA 1834167 c.628_629delAC frameshift_variant 0.62
rpsA 1834172 c.631_632insGG frameshift_variant 0.62
rpsA 1834177 c.636A>C synonymous_variant 0.68
rpsA 1834183 c.642T>C synonymous_variant 0.74
rpsA 1834213 c.672G>C synonymous_variant 0.7
rpsA 1834231 c.690T>C synonymous_variant 0.65
rpsA 1834234 c.693G>C synonymous_variant 0.67
rpsA 1834240 c.699T>C synonymous_variant 0.6
rpsA 1834249 c.708T>C synonymous_variant 0.58
rpsA 1834252 c.711C>T synonymous_variant 0.6
rpsA 1834261 c.720A>G synonymous_variant 0.64
rpsA 1834264 c.723G>C synonymous_variant 0.64
rpsA 1834279 c.738C>T synonymous_variant 0.65
rpsA 1834282 c.741C>T synonymous_variant 0.67
rpsA 1834294 c.753G>C synonymous_variant 0.8
rpsA 1834298 p.Gln253Ala missense_variant 0.8
rpsA 1834303 c.762T>G synonymous_variant 0.8
rpsA 1834306 c.765T>C synonymous_variant 0.8
rpsA 1834327 c.786G>T synonymous_variant 0.74
rpsA 1834339 c.798C>T synonymous_variant 0.71
rpsA 1834340 p.Met267Leu missense_variant 0.71
rpsA 1834345 c.804C>T synonymous_variant 0.71
rpsA 1834348 c.807T>C synonymous_variant 0.71
rpsA 1834361 c.820T>C synonymous_variant 0.71
rpsA 1834366 c.825A>G synonymous_variant 0.71
rpsA 1834372 c.831G>A synonymous_variant 0.71
rpsA 1834375 c.834G>A synonymous_variant 0.67
rpsA 1834378 c.837T>C synonymous_variant 0.68
rpsA 1834387 c.846C>T synonymous_variant 0.7
rpsA 1834396 c.855G>T synonymous_variant 0.67
rpsA 1834399 p.His286Gln missense_variant 0.7
rpsA 1834408 c.867C>T synonymous_variant 0.65
rpsA 1834411 c.870T>C synonymous_variant 0.67
rpsA 1834423 c.882G>C synonymous_variant 0.68
rpsA 1834451 c.910T>C synonymous_variant 0.68
rpsA 1834456 c.915T>G synonymous_variant 0.68
rpsA 1834468 c.927A>G synonymous_variant 0.64
rpsA 1834483 p.Glu314Asp missense_variant 0.7
rpsA 1834489 c.948T>C synonymous_variant 0.7
rpsA 1834504 c.963G>C synonymous_variant 0.69
rpsA 1834522 c.981C>T synonymous_variant 0.73
rpsA 1834528 c.987T>C synonymous_variant 0.76
rpsA 1834543 c.1002C>G synonymous_variant 0.76
rpsA 1834552 c.1011G>T synonymous_variant 0.77
rpsA 1834555 c.1014T>C synonymous_variant 0.79
rpsA 1834600 c.1059G>C synonymous_variant 0.72
rpsA 1834606 c.1065C>T synonymous_variant 0.7
rpsA 1834612 c.1071G>T synonymous_variant 0.7
rpsA 1834619 c.1078T>C synonymous_variant 0.69
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.69
rpsA 1834627 c.1086C>T synonymous_variant 0.69
rpsA 1834633 c.1092A>G synonymous_variant 0.69
rpsA 1834639 c.1098T>C synonymous_variant 0.69
rpsA 1834667 p.Ala376Ser missense_variant 0.75
rpsA 1834690 c.1149T>C synonymous_variant 0.65
rpsA 1834732 c.1191T>C synonymous_variant 0.62
rpsA 1834738 p.Glu399Asp missense_variant 0.61
rpsA 1834747 c.1206A>G synonymous_variant 0.6
rpsA 1834753 c.1212T>C synonymous_variant 0.54
rpsA 1834756 c.1215G>A synonymous_variant 0.52
rpsA 1834759 c.1218A>C synonymous_variant 0.52
rpsA 1834765 c.1224A>G synonymous_variant 0.54
rpsA 1834774 c.1233C>T synonymous_variant 0.45
rpsA 1834776 p.Ala412Glu missense_variant 0.45
rpsA 1834779 p.Glu413Ala missense_variant 0.45
rpsA 1834786 c.1245A>G synonymous_variant 0.47
rpsA 1834789 c.1248T>C synonymous_variant 0.47
rpsA 1834810 c.1269C>T synonymous_variant 0.62
rpsA 1834813 c.1272G>C synonymous_variant 0.58
rpsA 1834831 c.1290G>T synonymous_variant 0.75
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2169151 p.Pro488Ser missense_variant 0.29
PPE35 2169874 p.Ile247Phe missense_variant 0.2
PPE35 2170477 p.Gly46Ser missense_variant 0.29
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289170 c.72C>T synonymous_variant 0.22
kasA 2517953 c.-162C>T upstream_gene_variant 0.41
kasA 2517959 c.-156C>T upstream_gene_variant 0.41
kasA 2517962 c.-153C>G upstream_gene_variant 0.31
kasA 2517968 c.-147T>A upstream_gene_variant 0.27
kasA 2517974 c.-141T>C upstream_gene_variant 0.27
kasA 2517983 c.-132T>C upstream_gene_variant 0.25
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2519048 p.Gly312Ser missense_variant 1.0
eis 2714780 p.Gln185Lys missense_variant 0.25
ahpC 2726051 c.-142G>A upstream_gene_variant 1.0
ahpC 2726579 c.387T>G synonymous_variant 0.29
ahpC 2726593 p.Val134Ala missense_variant 0.29
ahpC 2726600 c.408T>C synonymous_variant 0.29
ahpC 2726638 p.Ala149Val missense_variant 0.33
ahpC 2726648 c.456T>A synonymous_variant 0.33
ahpC 2726654 c.462G>C synonymous_variant 0.33
ahpC 2726657 c.465A>C synonymous_variant 0.33
ahpC 2726669 c.477T>C synonymous_variant 0.33
ahpC 2726684 c.492G>C synonymous_variant 0.22
ahpC 2726696 c.504C>G synonymous_variant 0.22
folC 2747223 p.Glu126Lys missense_variant 0.67
ribD 2986827 c.-12G>T upstream_gene_variant 0.22
Rv2752c 3065074 c.1117delT frameshift_variant 0.2
thyA 3073925 c.547T>C synonymous_variant 0.5
thyA 3073926 c.546G>A synonymous_variant 0.5
thyA 3073929 c.543T>C synonymous_variant 0.5
thyA 3073933 c.538_539delAGinsTC synonymous_variant 0.5
thyA 3073953 c.519T>G synonymous_variant 0.5
thyA 3073956 c.516G>C synonymous_variant 0.5
thyA 3073971 c.501C>T synonymous_variant 0.5
thyA 3073977 c.495A>G synonymous_variant 0.5
thyA 3073980 c.492C>T synonymous_variant 0.5
thyA 3073992 c.478_480delAGCinsTCG synonymous_variant 0.5
thyA 3073995 c.477G>C synonymous_variant 0.5
thyA 3073999 p.Arg158Lys missense_variant 0.6
thyA 3074004 c.468T>C synonymous_variant 0.5
thyA 3074031 c.441T>C synonymous_variant 0.38
thyA 3074034 c.438T>C synonymous_variant 0.38
thyA 3074046 c.426G>A synonymous_variant 0.5
thyA 3074053 p.Arg140Gln missense_variant 0.38
thyA 3074056 p.Glu139Pro missense_variant 0.38
thyA 3074061 c.411A>G synonymous_variant 0.38
thyA 3074070 c.402C>T synonymous_variant 0.38
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087854 c.1035G>A synonymous_variant 0.5
fbiD 3339417 c.300A>G synonymous_variant 1.0
Rv3083 3448714 p.Asp71His missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474170 p.Pro55Arg missense_variant 0.29
fprA 3474597 c.591C>A synonymous_variant 1.0
fprA 3474764 p.Arg253Leu missense_variant 0.29
fprA 3474930 c.924C>T synonymous_variant 0.25
fprA 3475159 p.Asn385Asp missense_variant 1.0
whiB7 3568488 c.191delG frameshift_variant 1.0
fbiA 3640506 c.-37G>A upstream_gene_variant 0.33
fbiB 3640557 c.-978T>C upstream_gene_variant 1.0
fbiA 3640672 p.Val44Ile missense_variant 0.22
fbiB 3640695 c.-840C>G upstream_gene_variant 0.22
fbiA 3640701 p.Ile53Met missense_variant 0.22
fbiB 3640707 c.-828G>T upstream_gene_variant 0.22
fbiA 3640708 p.Leu56Val missense_variant 0.22
fbiA 3640714 p.Val58Ile missense_variant 0.22
fbiB 3640722 c.-813G>C upstream_gene_variant 0.22
fbiB 3640728 c.-807G>C upstream_gene_variant 0.22
fbiB 3640743 c.-792T>C upstream_gene_variant 0.2
fbiA 3640936 p.Leu132Val missense_variant 0.25
fbiB 3641772 p.Asp80Asn missense_variant 0.25
rpoA 3877569 p.Pro313Ala missense_variant 0.17
rpoA 3877587 c.921A>C synonymous_variant 0.27
rpoA 3877593 c.915C>T synonymous_variant 0.3
rpoA 3877599 p.Gln303Ala missense_variant 0.3
rpoA 3877613 p.Ile299Val missense_variant 0.42
rpoA 3877617 c.891G>C synonymous_variant 0.42
rpoA 3877623 c.885C>T synonymous_variant 0.5
rpoA 3877629 c.879C>G synonymous_variant 0.5
rpoA 3877638 c.870T>G synonymous_variant 0.62
rpoA 3877656 c.852T>C synonymous_variant 0.67
rpoA 3877662 c.846C>T synonymous_variant 0.77
rpoA 3877665 c.843C>G synonymous_variant 0.77
rpoA 3877668 c.840A>G synonymous_variant 0.77
rpoA 3877674 c.834C>G synonymous_variant 0.77
rpoA 3877677 c.831G>C synonymous_variant 0.77
rpoA 3877680 c.828G>T synonymous_variant 0.77
rpoA 3877686 c.822A>G synonymous_variant 0.77
rpoA 3877692 c.816G>C synonymous_variant 0.71
rpoA 3877704 c.804G>T synonymous_variant 0.75
rpoA 3877734 c.774G>C synonymous_variant 0.89
rpoA 3877737 c.771G>C synonymous_variant 0.89
rpoA 3877743 p.Asp255Glu missense_variant 0.89
rpoA 3877746 c.762G>C synonymous_variant 0.89
rpoA 3877749 c.759C>T synonymous_variant 0.9
rpoA 3877752 p.Asp252Glu missense_variant 0.9
rpoA 3877765 p.Ala248Ser missense_variant 0.84
rpoA 3877770 c.738A>G synonymous_variant 0.84
rpoA 3877776 c.732T>C synonymous_variant 0.84
rpoA 3877782 c.726T>C synonymous_variant 0.84
rpoA 3877803 c.705G>T synonymous_variant 0.81
rpoA 3877818 c.690A>G synonymous_variant 0.76
rpoA 3877827 c.681C>G synonymous_variant 0.76
rpoA 3877836 c.672A>G synonymous_variant 0.86
rpoA 3877842 c.666A>C synonymous_variant 0.83
rpoA 3877845 c.663G>C synonymous_variant 0.89
rpoA 3877848 c.660C>G synonymous_variant 0.89
rpoA 3877854 c.652_654delTTGinsCTC synonymous_variant 0.89
rpoA 3877857 c.651G>A synonymous_variant 0.89
rpoA 3877863 c.645G>C synonymous_variant 0.89
rpoA 3877866 c.642G>C synonymous_variant 0.89
rpoA 3877875 c.633T>G synonymous_variant 1.0
rpoA 3877878 c.630G>C synonymous_variant 1.0
rpoA 3877890 c.618C>T synonymous_variant 1.0
rpoA 3877893 c.615C>T synonymous_variant 1.0
rpoA 3877898 p.Pro204Ala missense_variant 1.0
rpoA 3877905 c.603A>G synonymous_variant 1.0
rpoA 3877908 c.600T>C synonymous_variant 1.0
rpoA 3877926 c.582G>C synonymous_variant 1.0
rpoA 3877929 p.Ile193Val missense_variant 1.0
rpoA 3877932 c.576G>C synonymous_variant 1.0
rpoA 3877936 p.Lys191Arg missense_variant 1.0
rpoA 3877938 c.570C>T synonymous_variant 1.0
rpoA 3877959 c.549C>G synonymous_variant 1.0
rpoA 3877962 c.546G>T synonymous_variant 1.0
rpoA 3877971 p.Asp179Glu missense_variant 0.87
rpoA 3877974 c.534G>C synonymous_variant 0.87
rpoA 3877989 c.519A>G synonymous_variant 0.86
rpoA 3878001 c.507A>G synonymous_variant 0.86
rpoA 3878010 c.498C>G synonymous_variant 0.85
rpoA 3878013 c.495T>C synonymous_variant 0.85
rpoA 3878019 c.489A>G synonymous_variant 0.73
rpoA 3878025 c.483C>G synonymous_variant 0.73
rpoA 3878028 c.480G>C synonymous_variant 0.73
rpoA 3878031 c.477T>C synonymous_variant 0.73
rpoA 3878034 c.474A>G synonymous_variant 0.73
rpoA 3878046 c.462T>G synonymous_variant 0.75
rpoA 3878050 p.Arg153Lys missense_variant 0.75
rpoA 3878055 c.453A>G synonymous_variant 0.75
rpoA 3878061 c.447G>C synonymous_variant 0.78
rpoA 3878070 c.438T>C synonymous_variant 0.81
rpoA 3878082 c.426T>G synonymous_variant 0.82
rpoA 3878102 p.Val136Ile missense_variant 0.83
rpoA 3878103 c.405A>G synonymous_variant 0.83
rpoA 3878106 c.402G>C synonymous_variant 0.83
rpoA 3878118 c.390T>C synonymous_variant 0.79
rpoA 3878127 c.381G>C synonymous_variant 0.83
rpoA 3878141 p.Met123Leu missense_variant 0.84
rpoA 3878142 p.Gly122Asp missense_variant 0.83
rpoA 3878185 p.Gly108Ala missense_variant 0.81
rpoA 3878188 p.Ala107Gly missense_variant 0.82
rpoA 3878193 c.315T>C synonymous_variant 0.82
rpoA 3878196 p.Glu104Thr missense_variant 0.82
rpoA 3878199 c.309T>C synonymous_variant 0.82
rpoA 3878214 c.294C>T synonymous_variant 0.89
rpoA 3878217 p.Leu97Val missense_variant 0.89
rpoA 3878244 c.264G>A synonymous_variant 0.86
rpoA 3878247 c.261G>C synonymous_variant 0.86
rpoA 3878251 c.256_257delTCinsAG synonymous_variant 0.86
rpoA 3878259 c.249G>C synonymous_variant 0.86
rpoA 3878264 p.Ser82Gly missense_variant 0.89
rpoA 3878271 c.237T>C synonymous_variant 0.88
rpoA 3878276 c.232C>T synonymous_variant 0.83
rpoA 3878283 p.Glu75Asp missense_variant 0.82
rpoA 3878295 c.213A>G synonymous_variant 0.78
rpoA 3878298 c.210A>G synonymous_variant 0.78
rpoA 3878310 c.198G>C synonymous_variant 0.73
rpoA 3878313 c.195G>C synonymous_variant 0.71
rpoA 3878322 c.186A>G synonymous_variant 0.71
rpoA 3878328 c.180G>C synonymous_variant 0.67
rpoA 3878331 c.177A>G synonymous_variant 0.63
rpoA 3878337 c.171T>C synonymous_variant 0.59
rpoA 3878346 c.162T>C synonymous_variant 0.5
rpoA 3878357 p.Val51Ile missense_variant 0.42
rpoA 3878361 c.147G>T synonymous_variant 0.42
rpoA 3878364 c.144A>T synonymous_variant 0.36
rpoA 3878367 c.141C>G synonymous_variant 0.36
rpoA 3878370 c.138T>C synonymous_variant 0.36
rpoA 3878376 c.130_132delTCGinsAGC synonymous_variant 0.36
rpoA 3878379 c.129G>C synonymous_variant 0.36
rpoA 3878388 c.120C>T synonymous_variant 0.38
rpoA 3878400 c.108T>C synonymous_variant 0.38
rpoA 3878406 c.102G>C synonymous_variant 0.45
rpoA 3878421 c.87A>C synonymous_variant 0.33
rpoA 3878424 c.84G>C synonymous_variant 0.33
rpoA 3878430 c.78G>C synonymous_variant 0.25
rpoA 3878442 c.66G>C synonymous_variant 0.29
rpoA 3878450 p.Gln20Lys missense_variant 0.29
rpoA 3878544 c.-37C>T upstream_gene_variant 1.0
ddn 3986645 c.-199G>A upstream_gene_variant 0.4
ddn 3986656 c.-188C>G upstream_gene_variant 0.4
ddn 3986659 c.-185_-184insCTC upstream_gene_variant 0.4
ddn 3986672 c.-172G>C upstream_gene_variant 0.4
ddn 3986676 c.-168_-166delATCinsGTG upstream_gene_variant 0.4
ddn 3986699 c.-145C>G upstream_gene_variant 0.4
ddn 3986703 c.-141T>G upstream_gene_variant 0.4
ddn 3987124 p.Ala94Gly missense_variant 0.18
clpC1 4038377 c.2328C>G synonymous_variant 0.33
clpC1 4038383 c.2322G>T synonymous_variant 0.33
clpC1 4038388 c.2317T>C synonymous_variant 0.4
clpC1 4038392 c.2313C>T synonymous_variant 0.33
clpC1 4038395 c.2310C>G synonymous_variant 0.33
clpC1 4038398 c.2307G>T synonymous_variant 0.33
clpC1 4038401 c.2302_2304delTTGinsCTC synonymous_variant 0.4
clpC1 4038419 c.2286T>C synonymous_variant 0.5
clpC1 4038428 c.2277G>C synonymous_variant 0.5
clpC1 4038433 c.2272C>T synonymous_variant 0.5
clpC1 4038444 p.Ala754Arg missense_variant 0.5
clpC1 4038446 c.2259T>C synonymous_variant 0.5
clpC1 4038452 c.2253G>C synonymous_variant 0.5
clpC1 4038456 p.Val750Glu missense_variant 0.38
clpC1 4038458 c.2247G>C synonymous_variant 0.38
clpC1 4038461 c.2244G>A synonymous_variant 0.38
clpC1 4038474 p.Ser744Asn missense_variant 0.38
clpC1 4038479 c.2226C>G synonymous_variant 0.38
clpC1 4038484 c.2219_2220delGC frameshift_variant 0.29
clpC1 4038494 c.2211G>T synonymous_variant 0.38
clpC1 4038498 p.Ser736Asn missense_variant 0.44
clpC1 4038512 c.2193C>T synonymous_variant 0.55
clpC1 4038519 p.Arg729Gln missense_variant 0.62
clpC1 4038530 p.Glu725Asp missense_variant 0.69
clpC1 4038536 c.2169C>G synonymous_variant 0.72
clpC1 4038541 c.2164C>T synonymous_variant 0.74
clpC1 4038551 c.2154C>G synonymous_variant 0.74
clpC1 4038559 p.Ile716Val missense_variant 0.74
clpC1 4038584 c.2121G>C synonymous_variant 0.72
clpC1 4038587 c.2118C>T synonymous_variant 0.72
clpC1 4038596 c.2109A>G synonymous_variant 0.65
clpC1 4038604 c.2101C>T synonymous_variant 0.64
clpC1 4038605 c.2100G>A synonymous_variant 0.64
clpC1 4038620 p.Gln695Leu missense_variant 0.67
clpC1 4038623 c.2082A>G synonymous_variant 0.67
clpC1 4038638 c.2066dupA frameshift_variant 0.67
clpC1 4038648 p.Gly686Asp missense_variant 0.67
clpC1 4038651 p.Gly685Asp missense_variant 0.67
clpC1 4038661 p.Ser682Thr missense_variant 0.7
clpC1 4038662 c.2043T>C synonymous_variant 0.7
clpC1 4038671 c.2034T>G synonymous_variant 0.71
clpC1 4038677 p.Pro676Ala missense_variant 0.77
clpC1 4038683 c.2022T>C synonymous_variant 0.77
clpC1 4038698 c.2007C>T synonymous_variant 0.77
clpC1 4038701 c.2004G>C synonymous_variant 0.77
clpC1 4038704 c.2001T>C synonymous_variant 0.77
clpC1 4038707 c.1998C>G synonymous_variant 0.77
clpC1 4038710 c.1995G>C synonymous_variant 0.77
clpC1 4038713 c.1992T>C synonymous_variant 0.8
clpC1 4038740 c.1965G>C synonymous_variant 0.89
clpC1 4038749 c.1956C>A synonymous_variant 0.88
clpC1 4038755 c.1950G>T synonymous_variant 0.88
clpC1 4038770 c.1935C>T synonymous_variant 0.87
clpC1 4038773 c.1932T>C synonymous_variant 0.86
clpC1 4038776 c.1929G>A synonymous_variant 0.86
clpC1 4038782 c.1923G>C synonymous_variant 0.86
clpC1 4038790 c.1915C>T synonymous_variant 0.88
clpC1 4038795 p.Ser637Thr missense_variant 0.92
clpC1 4038810 p.Gln632Ser missense_variant 0.82
clpC1 4038812 c.1893T>C synonymous_variant 0.8
clpC1 4038857 c.1848C>T synonymous_variant 0.84
clpC1 4038875 c.1830C>G synonymous_variant 0.83
clpC1 4038878 c.1827A>G synonymous_variant 0.83
clpC1 4038884 c.1821C>T synonymous_variant 0.84
clpC1 4038890 c.1815G>A synonymous_variant 0.85
clpC1 4038905 c.1800A>T synonymous_variant 0.85
clpC1 4038911 c.1794G>T synonymous_variant 0.84
clpC1 4038914 c.1791G>C synonymous_variant 0.84
clpC1 4038917 c.1788C>T synonymous_variant 0.84
clpC1 4038923 c.1782A>G synonymous_variant 0.85
clpC1 4038926 c.1779G>T synonymous_variant 0.85
clpC1 4038953 c.1752A>G synonymous_variant 0.85
clpC1 4038956 c.1749T>C synonymous_variant 0.85
clpC1 4038965 c.1740T>C synonymous_variant 0.85
clpC1 4038971 c.1734T>C synonymous_variant 0.86
clpC1 4038974 c.1731T>C synonymous_variant 0.86
clpC1 4038977 c.1728G>A synonymous_variant 0.86
clpC1 4038986 p.Asp573Glu missense_variant 0.85
clpC1 4038989 c.1716T>C synonymous_variant 0.85
clpC1 4038997 c.1708T>C synonymous_variant 0.84
clpC1 4039004 c.1701C>G synonymous_variant 0.86
clpC1 4039019 c.1686G>C synonymous_variant 0.8
clpC1 4039022 c.1683A>G synonymous_variant 0.79
clpC1 4039031 c.1674T>A synonymous_variant 0.76
clpC1 4039037 c.1668T>C synonymous_variant 0.76
clpC1 4039073 c.1632C>T synonymous_variant 0.76
clpC1 4039085 c.1620A>G synonymous_variant 0.78
clpC1 4039088 c.1617G>C synonymous_variant 0.78
clpC1 4039091 c.1614G>A synonymous_variant 0.76
clpC1 4039097 c.1608G>C synonymous_variant 0.65
clpC1 4039106 c.1599G>C synonymous_variant 0.63
clpC1 4039112 c.1593C>G synonymous_variant 0.65
clpC1 4039121 c.1584T>C synonymous_variant 0.67
clpC1 4039133 c.1572C>G synonymous_variant 0.62
clpC1 4039136 c.1569C>T synonymous_variant 0.58
clpC1 4039142 c.1563A>G synonymous_variant 0.54
clpC1 4039145 c.1560G>C synonymous_variant 0.54
clpC1 4039169 p.Glu512Asp missense_variant 0.5
clpC1 4039172 c.1533A>G synonymous_variant 0.5
clpC1 4039178 c.1527G>C synonymous_variant 0.5
clpC1 4039181 c.1522_1524delTTGinsCTC synonymous_variant 0.5
clpC1 4039184 c.1521G>A synonymous_variant 0.5
clpC1 4039187 c.1518G>T synonymous_variant 0.5
clpC1 4039199 p.Ala502Glu missense_variant 0.6
clpC1 4039226 c.1479T>C synonymous_variant 0.56
clpC1 4039244 c.1461G>C synonymous_variant 0.56
clpC1 4039274 c.1431G>C synonymous_variant 0.67
clpC1 4039277 c.1428C>G synonymous_variant 0.67
clpC1 4039280 c.1425G>C synonymous_variant 0.67
clpC1 4039286 p.Leu473Met missense_variant 0.67
clpC1 4039293 c.1411_1412insTG frameshift_variant 0.67
clpC1 4039296 c.1407_1408delTT frameshift_variant 0.67
clpC1 4039304 c.1401G>A synonymous_variant 0.67
clpC1 4039313 c.1392C>T synonymous_variant 0.67
clpC1 4039319 c.1386T>C synonymous_variant 0.67
clpC1 4039327 p.Gln460Glu missense_variant 0.67
clpC1 4039328 c.1377A>C synonymous_variant 0.67
clpC1 4039334 c.1371G>C synonymous_variant 0.67
clpC1 4039338 p.Thr456Gln missense_variant 0.67
clpC1 4039340 c.1365G>A synonymous_variant 0.67
clpC1 4039347 p.Arg453Lys missense_variant 0.67
clpC1 4039352 c.1353C>G synonymous_variant 0.79
clpC1 4039355 c.1350G>C synonymous_variant 0.79
clpC1 4039382 c.1323C>G synonymous_variant 0.8
clpC1 4039391 c.1314T>G synonymous_variant 0.92
clpC1 4039394 c.1311G>C synonymous_variant 1.0
clpC1 4039397 c.1308A>G synonymous_variant 1.0
clpC1 4039407 p.Arg433Lys missense_variant 1.0
clpC1 4039409 c.1296T>C synonymous_variant 1.0
clpC1 4039412 c.1293T>C synonymous_variant 1.0
clpC1 4039415 p.Glu430Asp missense_variant 1.0
clpC1 4039418 c.1287C>T synonymous_variant 1.0
clpC1 4039424 p.Lys427Arg missense_variant 1.0
clpC1 4039430 c.1275T>C synonymous_variant 1.0
clpC1 4039442 c.1263A>G synonymous_variant 1.0
clpC1 4039448 c.1257A>G synonymous_variant 1.0
clpC1 4039454 c.1251A>G synonymous_variant 1.0
clpC1 4039463 c.1242C>G synonymous_variant 1.0
clpC1 4039466 c.1239T>C synonymous_variant 1.0
clpC1 4039469 c.1236T>C synonymous_variant 1.0
clpC1 4039472 c.1233G>C synonymous_variant 1.0
clpC1 4039481 c.1224T>G synonymous_variant 0.91
clpC1 4039484 c.1221T>C synonymous_variant 0.93
clpC1 4039499 c.1206G>C synonymous_variant 0.88
clpC1 4039517 c.1188C>G synonymous_variant 0.87
clpC1 4039553 c.1152C>G synonymous_variant 0.8
clpC1 4039559 c.1146C>G synonymous_variant 0.8
clpC1 4039570 p.Met379Leu missense_variant 0.67
clpC1 4039571 c.1134G>C synonymous_variant 0.67
clpC1 4039574 p.Ala377Gly missense_variant 0.67
clpC1 4039577 c.1128T>C synonymous_variant 0.67
clpC1 4039583 c.1122C>T synonymous_variant 0.8
clpC1 4039586 c.1119G>C synonymous_variant 0.8
clpC1 4039601 p.Ala368Ser missense_variant 0.72
clpC1 4039610 c.1095G>C synonymous_variant 0.81
clpC1 4039616 c.1089G>C synonymous_variant 0.81
clpC1 4039622 c.1083C>G synonymous_variant 0.75
clpC1 4039654 p.Thr351Ser missense_variant 0.68
clpC1 4039661 c.1044T>C synonymous_variant 0.69
clpC1 4039664 c.1041G>C synonymous_variant 0.69
clpC1 4039682 c.1023C>G synonymous_variant 0.65
clpC1 4039691 c.1014G>C synonymous_variant 0.62
clpC1 4039694 c.1011G>T synonymous_variant 0.62
clpC1 4039724 c.981A>G synonymous_variant 0.63
clpC1 4039742 c.963C>T synonymous_variant 0.68
clpC1 4039748 c.957G>C synonymous_variant 0.68
clpC1 4039751 c.954A>G synonymous_variant 0.7
clpC1 4039757 c.948A>G synonymous_variant 0.76
clpC1 4039769 c.936C>G synonymous_variant 0.74
clpC1 4039778 c.927A>G synonymous_variant 0.76
clpC1 4039781 c.924G>C synonymous_variant 0.76
clpC1 4039787 c.918G>C synonymous_variant 0.77
clpC1 4039790 c.915C>G synonymous_variant 0.77
clpC1 4039793 c.912C>G synonymous_variant 0.77
clpC1 4039817 c.888A>T synonymous_variant 0.74
clpC1 4039820 c.885T>G synonymous_variant 0.74
clpC1 4039823 c.882T>C synonymous_variant 0.74
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.74
clpC1 4039832 c.873C>G synonymous_variant 0.71
clpC1 4039850 c.855T>C synonymous_variant 0.76
clpC1 4039865 c.840T>C synonymous_variant 0.74
clpC1 4039898 c.807C>G synonymous_variant 0.71
clpC1 4039904 c.801A>G synonymous_variant 0.75
clpC1 4039931 c.774T>C synonymous_variant 0.78
clpC1 4039946 c.759A>G synonymous_variant 0.76
clpC1 4039949 c.756G>C synonymous_variant 0.76
clpC1 4039952 c.753T>C synonymous_variant 0.76
clpC1 4039955 c.750G>C synonymous_variant 0.76
clpC1 4039958 c.747G>C synonymous_variant 0.74
clpC1 4039996 p.Glu237Gln missense_variant 0.81
clpC1 4040002 p.His235Asn missense_variant 0.8
clpC1 4040003 c.702G>C synonymous_variant 0.8
clpC1 4040018 c.687G>C synonymous_variant 0.78
clpC1 4040021 c.684A>T synonymous_variant 0.72
clpC1 4040024 c.681A>G synonymous_variant 0.81
clpC1 4040033 c.672G>C synonymous_variant 0.73
clpC1 4040087 c.618G>C synonymous_variant 0.68
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.68
clpC1 4040093 c.612C>G synonymous_variant 0.68
clpC1 4040138 c.567G>C synonymous_variant 0.2
clpC1 4040144 c.561G>C synonymous_variant 0.4
clpC1 4040153 c.552A>G synonymous_variant 0.25
clpC1 4040156 p.Met183Gly missense_variant 0.25
clpC1 4040162 c.543G>C synonymous_variant 0.29
clpC1 4040165 c.540G>C synonymous_variant 0.29
clpC1 4040168 c.537G>C synonymous_variant 0.29
clpC1 4040171 c.534C>G synonymous_variant 0.29
clpC1 4040177 c.528C>G synonymous_variant 0.29
clpC1 4040288 c.417C>T synonymous_variant 0.22
clpC1 4040291 c.414G>C synonymous_variant 0.22
clpC1 4040303 c.402G>C synonymous_variant 0.22
clpC1 4040310 p.Thr132Asn missense_variant 0.22
clpC1 4040312 c.393G>C synonymous_variant 0.22
clpC1 4040315 p.Glu130Asp missense_variant 0.22
clpC1 4040318 c.387C>T synonymous_variant 0.22
clpC1 4040330 c.375C>G synonymous_variant 0.22
clpC1 4040336 c.369G>C synonymous_variant 0.22
clpC1 4040342 c.363C>G synonymous_variant 0.3
clpC1 4040354 c.351A>G synonymous_variant 0.27
clpC1 4040357 c.348T>C synonymous_variant 0.27
clpC1 4040363 c.342A>T synonymous_variant 0.25
clpC1 4040375 c.330G>C synonymous_variant 0.2
clpC1 4040378 c.325_327delTTGinsCTC synonymous_variant 0.2
clpC1 4040381 c.324T>C synonymous_variant 0.2
clpC1 4040387 c.318A>G synonymous_variant 0.21
clpC1 4040393 c.312G>C synonymous_variant 0.21
clpC1 4040411 c.294T>C synonymous_variant 0.21
clpC1 4040417 c.286_288delCTGinsTTA synonymous_variant 0.21
clpC1 4040420 c.285G>C synonymous_variant 0.21
clpC1 4040423 c.282A>G synonymous_variant 0.21
clpC1 4040431 c.274T>C synonymous_variant 0.21
clpC1 4040432 c.271_273delAGCinsTCG synonymous_variant 0.21
clpC1 4040437 c.268C>T synonymous_variant 0.21
clpC1 4040450 c.255A>G synonymous_variant 0.31
clpC1 4040459 c.246C>G synonymous_variant 0.31
clpC1 4040462 c.243C>G synonymous_variant 0.31
clpC1 4040465 c.240T>C synonymous_variant 0.31
clpC1 4040471 c.234T>C synonymous_variant 0.36
clpC1 4040477 c.228G>A synonymous_variant 0.36
clpC1 4040480 c.225T>G synonymous_variant 0.4
clpC1 4040495 c.210C>G synonymous_variant 0.36
clpC1 4040517 p.Val63Ala missense_variant 0.67
clpC1 4040522 c.183T>C synonymous_variant 0.33
clpC1 4040528 c.177G>T synonymous_variant 0.33
clpC1 4040531 c.174T>C synonymous_variant 0.33
clpC1 4040540 c.165G>C synonymous_variant 0.33
clpC1 4040551 c.154T>C synonymous_variant 0.2
clpC1 4040552 c.153G>A synonymous_variant 0.2
clpC1 4040555 c.150G>A synonymous_variant 0.2
clpC1 4040561 p.Ser48Ala missense_variant 0.2
clpC1 4040573 c.132T>G synonymous_variant 0.2
embC 4240433 p.Tyr191His missense_variant 0.29
embC 4240671 p.Thr270Ile missense_variant 1.0
embC 4241042 p.Asn394Asp missense_variant 1.0
embC 4242067 c.2205G>A synonymous_variant 0.25
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243580 c.348G>A synonymous_variant 1.0
embA 4244420 c.1188G>C synonymous_variant 1.0
embA 4244464 p.Ala411Val missense_variant 0.25
embA 4245969 p.Pro913Ser missense_variant 1.0
embB 4247260 c.747C>T synonymous_variant 0.4
embB 4247331 p.Trp273Leu missense_variant 0.4
embB 4247578 c.1065G>A synonymous_variant 1.0
embB 4247646 p.Glu378Ala missense_variant 1.0
aftB 4267749 p.Phe363Ser missense_variant 0.5
aftB 4268125 p.Ser238Gly missense_variant 0.4
aftB 4268452 c.384delG frameshift_variant 0.22
ubiA 4269203 p.Glu211Gln missense_variant 0.25
ubiA 4269220 p.Ala205Lys missense_variant 0.22
aftB 4269222 c.-386T>C upstream_gene_variant 0.22
aftB 4269231 c.-395C>G upstream_gene_variant 0.22
aftB 4269234 c.-398A>G upstream_gene_variant 0.22
aftB 4269240 c.-404G>C upstream_gene_variant 0.2
ubiA 4269243 p.His197Gln missense_variant 0.2
aftB 4269246 c.-410G>C upstream_gene_variant 0.2
aftB 4269264 c.-428C>T upstream_gene_variant 0.2
aftB 4269270 c.-434G>A upstream_gene_variant 0.2
aftB 4269291 c.-455A>C upstream_gene_variant 0.25
ubiA 4269297 p.Ile179Val missense_variant 0.25
aftB 4269305 c.-469T>C upstream_gene_variant 0.25
aftB 4269306 c.-470T>C upstream_gene_variant 0.25
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
ubiA 4269864 c.-32delG upstream_gene_variant 1.0
ethA 4326437 p.Leu346Pro missense_variant 0.22
ethA 4327346 p.Gly43Ala missense_variant 0.2
ethA 4327451 p.Val8Gly missense_variant 0.22
ethR 4327741 p.Phe65Ile missense_variant 0.33
whiB6 4338361 p.Arg54Gln missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
whiB6 4338603 c.-82C>T upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407873 c.330G>T synonymous_variant 1.0