Rv3457c - c.198G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
46 Sensitive
3 RR-TB
44 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9 | 70 |
| La3;lineage4.9 | 8 |
| La1.2 | 1 |
| lineage3 | 5 |
| lineage4.1.2.1 | 8 |
| lineage2.2.1 | 10 |
| lineage4.8 | 10 |
| lineage4.1 | 1 |
| La1.8.1 | 3 |
| La1.7;lineage4.9 | 5 |
| 9 | |
| lineage6 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage6.3.1 | 2 |
| lineage4.6.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.5 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786440 | Other | lineage4.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR12416824 | HR-TB | None | ERR9786443 | Sensitive | lineage4.8 | None | ERR9117721 | HR-TB | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR5341453 | Other | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9787197 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046878 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR4798823 | HR-TB | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3804162 | Sensitive | lineage6.3.1 | None | ERR4800341 | Other | None | ERR3797019 | Other | La1.8.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR9787223 | Sensitive | lineage6.3.1 | None | ERR3273109 | HR-TB | lineage4 | None | SRR7535086 | Other | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3470647 | Other | lineage3 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR926165 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7236177 | Other | La1.8.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR9786508 | Sensitive | lineage4.3.3;lineage4.3.4.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None |
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