TB-Profiler result

Run: ERR3804155

Summary

Run ID: ERR3804155

Sample name:

Date: 2024-04-14T16:25:30.367136

Number of reads: 2974210

Percentage reads mapped: 71.12

Median coverage: 125.0

Strain: lineage4.1.2.1

Spoligotype:

Drug-resistance: Other


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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4.1 Euro-American None 0.93
lineage4.1.2 Euro-American None 0.98
lineage4.1.2.1 Euro-American (Haarlem) RD182 0.98
La1.2.BCG M.bovis None 0.09
lineage4 Euro-American None 0.95
La1.7.1 M.bovis None 0.1
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol embB p.His312Arg Mutation from literature
p.Tyr384Asn Mutation from literature
p.Ala388Gly Mutation from literature
p.Asn399Asp Mutation from literature
pyrazinamide
streptomycin rrs n.462C>T Uncertain significance Mutation from literature
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid fgd1 c.202_204delCTGinsAC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.301_303delGTTinsAC Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC c.604_606delTCGinsGC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.859_861delATCinsGG Assoc w R - Interim Confers DLM-PMD cross-resistance
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
fgd1 490984 c.202_204delCTGinsAC frameshift_variant&missense_variant 0.26 pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491083 c.301_303delGTTinsAC frameshift_variant&missense_variant 0.23 pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1303534 c.604_606delTCGinsGC frameshift_variant&missense_variant 0.2 pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1303789 c.859_861delATCinsGG frameshift_variant&missense_variant 0.26 pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.24 streptomycin Uncertain significance Mutation from literature
embB 4247448 p.His312Arg missense_variant 0.27 ethambutol Mutation from literature
embB 4247663 p.Tyr384Asn missense_variant 0.24 ethambutol Mutation from literature
embB 4247676 p.Ala388Gly missense_variant 0.24 ethambutol Mutation from literature
embB 4247708 p.Asn399Asp missense_variant 0.26 ethambutol Mutation from literature
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
dnaA 882 c.882C>T synonymous_variant 0.17 isoniazid
dnaA 975 c.975G>T synonymous_variant 0.18 isoniazid
dnaA 1038 c.1038A>T synonymous_variant 0.17 isoniazid
dnaA 1068 c.1068T>C synonymous_variant 0.19 isoniazid
dnaA 1104 c.1104T>C synonymous_variant 0.19 isoniazid
dnaA 1125 c.1125G>C synonymous_variant 0.18 isoniazid
dnaA 1164 c.1164A>C synonymous_variant 0.2 isoniazid
dnaA 1176 c.1176A>G synonymous_variant 0.2 isoniazid
dnaA 1188 c.1188G>A synonymous_variant 0.22 isoniazid
dnaA 1191 c.1191T>C synonymous_variant 0.22 isoniazid
dnaA 1197 c.1197T>C synonymous_variant 0.22 isoniazid Not assoc w R - Interim
dnaA 1204 c.1204C>T synonymous_variant 0.23 isoniazid
dnaA 1220 p.Asn407Ser missense_variant 0.24 isoniazid
dnaA 1230 c.1230A>G synonymous_variant 0.23 isoniazid
dnaA 1236 c.1236C>T synonymous_variant 0.25 isoniazid
dnaA 1242 c.1242G>C synonymous_variant 0.26 isoniazid
dnaA 1245 c.1245G>C synonymous_variant 0.27 isoniazid Not assoc w R - Interim
dnaA 1254 c.1254T>C synonymous_variant 0.28 isoniazid
dnaA 1278 c.1278T>C synonymous_variant 0.26 isoniazid
dnaA 1284 c.1284C>G synonymous_variant 0.25 isoniazid
dnaA 1287 c.1287A>G synonymous_variant 0.24 isoniazid
dnaA 1290 c.1290G>A synonymous_variant 0.24 isoniazid
dnaA 1293 c.1293T>C synonymous_variant 0.25 isoniazid
dnaA 1299 c.1299G>C synonymous_variant 0.25 isoniazid Not assoc w R - Interim
dnaA 1311 c.1311C>G synonymous_variant 0.23 isoniazid
dnaA 1314 c.1314A>G synonymous_variant 0.23 isoniazid
dnaA 1317 c.1317A>G synonymous_variant 0.23 isoniazid
dnaA 1320 c.1320G>C synonymous_variant 0.24 isoniazid
dnaA 1332 c.1332A>C synonymous_variant 0.25 isoniazid Not assoc w R - Interim
dnaA 1338 c.1338T>C synonymous_variant 0.25 isoniazid
dnaA 1353 c.1353T>C synonymous_variant 0.24 isoniazid
dnaA 1371 c.1371T>G synonymous_variant 0.21 isoniazid
dnaA 1375 c.1375T>C synonymous_variant 0.21 isoniazid
dnaA 1383 c.1383A>G synonymous_variant 0.21 isoniazid
gyrB 6238 c.999G>A synonymous_variant 0.24 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6242 p.Arg335Lys missense_variant 0.24 levofloxacin
moxifloxacin
gyrB 6250 c.1011A>C synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrB 6256 c.1017G>A synonymous_variant 0.25 levofloxacin
moxifloxacin
gyrB 6259 c.1020C>T synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6265 c.1026C>T synonymous_variant 0.26 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6268 c.1029C>G synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrB 6280 c.1041T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrB 6286 c.1047T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrB 6289 c.1050C>T synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrB 6292 c.1053G>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrB 6307 c.1068T>G synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6319 c.1080G>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrB 6346 c.1107C>T synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6361 c.-941G>A upstream_gene_variant 0.22 levofloxacin
moxifloxacin
gyrA 6362 c.-940T>C upstream_gene_variant 0.22 levofloxacin
moxifloxacin
gyrA 6376 c.-926G>A upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6379 c.-923C>G upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6382 c.-920A>G upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6388 c.-914T>C upstream_gene_variant 0.25 levofloxacin
moxifloxacin
gyrA 6403 c.-899T>C upstream_gene_variant 0.21 levofloxacin
moxifloxacin
gyrA 6415 c.-887G>C upstream_gene_variant 0.2 levofloxacin
moxifloxacin
gyrA 6418 c.-884C>G upstream_gene_variant 0.2 levofloxacin
moxifloxacin
gyrB 6577 c.1338T>C synonymous_variant 0.19 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6598 c.-704C>G upstream_gene_variant 0.25 levofloxacin
moxifloxacin
gyrA 6610 c.-692C>G upstream_gene_variant 0.25 levofloxacin
moxifloxacin
gyrA 6613 c.-689A>G upstream_gene_variant 0.27 levofloxacin
moxifloxacin
gyrA 6616 c.-686A>G upstream_gene_variant 0.27 levofloxacin
moxifloxacin
gyrA 6622 c.-680C>T upstream_gene_variant 0.27 levofloxacin
moxifloxacin
gyrA 6634 c.-668T>C upstream_gene_variant 0.28 levofloxacin
moxifloxacin
gyrA 6637 c.-665T>G upstream_gene_variant 0.28 levofloxacin
moxifloxacin
gyrA 6640 c.-662A>G upstream_gene_variant 0.28 levofloxacin
moxifloxacin
gyrA 6649 c.-653T>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6655 c.-647T>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6670 c.-632G>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6673 c.-629A>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6676 c.-626T>G upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6700 c.-602T>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6703 c.-599G>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6709 c.-593A>G upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6712 c.-590G>C upstream_gene_variant 0.3 levofloxacin
moxifloxacin
gyrB 6728 c.1489_1491delCTAinsTG frameshift_variant&stop_gained 0.27 levofloxacin Uncertain significance
moxifloxacin
gyrA 6742 c.-560A>G upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrB 6745 c.1506T>G synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6751 c.-551G>C upstream_gene_variant 0.32 levofloxacin
moxifloxacin
gyrA 6760 c.-542G>C upstream_gene_variant 0.31 levofloxacin
moxifloxacin
gyrB 6763 c.1524G>C synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6775 c.1536G>C synonymous_variant 0.32 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6793 c.1554T>C synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6797 p.Gly520Thr missense_variant 0.34 levofloxacin
moxifloxacin
gyrB 6811 c.1572C>T synonymous_variant 0.33 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrB 6841 c.1602T>C synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6844 c.-458T>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6853 c.-449A>G upstream_gene_variant 0.28 levofloxacin
moxifloxacin
gyrB 6856 c.1617T>C synonymous_variant 0.28 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6859 c.1620T>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6862 c.1623C>G synonymous_variant 0.28 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6878 c.1639T>C synonymous_variant 0.26 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6881 c.1642_1644delTTGinsCC frameshift_variant&missense_variant 0.26 levofloxacin Uncertain significance
moxifloxacin
gyrA 6889 c.-413G>C upstream_gene_variant 0.26 levofloxacin
moxifloxacin
gyrA 6898 c.-404G>C upstream_gene_variant 0.26 levofloxacin
moxifloxacin
gyrA 6901 c.-401G>C upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6904 c.-398C>G upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6910 c.-392G>A upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrA 6916 c.-386G>C upstream_gene_variant 0.26 levofloxacin
moxifloxacin
gyrB 6919 c.1680T>C synonymous_variant 0.26 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6925 c.-377T>C upstream_gene_variant 0.27 levofloxacin
moxifloxacin
gyrB 6931 c.1692A>G synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6949 c.-353A>G upstream_gene_variant 0.3 levofloxacin
moxifloxacin
gyrB 6952 c.1713C>G synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6967 c.-335T>C upstream_gene_variant 0.31 levofloxacin
moxifloxacin
gyrA 6973 c.-329G>C upstream_gene_variant 0.31 levofloxacin
moxifloxacin
gyrA 6982 c.-320A>C upstream_gene_variant 0.31 levofloxacin
moxifloxacin
gyrA 7007 c.-295C>T upstream_gene_variant 0.25 levofloxacin
moxifloxacin
gyrA 7010 c.-292C>T upstream_gene_variant 0.24 levofloxacin
moxifloxacin
gyrB 7023 p.Leu595Gln missense_variant 0.22 levofloxacin
moxifloxacin
gyrA 7033 c.-269G>C upstream_gene_variant 0.22 levofloxacin
moxifloxacin
gyrB 7051 p.Glu604Asp missense_variant 0.21 levofloxacin
moxifloxacin
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7391 c.90C>T synonymous_variant 0.19 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7406 c.105G>C synonymous_variant 0.19 levofloxacin
moxifloxacin
gyrA 7427 c.126G>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 7442 c.141G>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 7451 c.150C>G synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 7457 c.156T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 7475 c.174A>G synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7480 p.Phe60Tyr missense_variant 0.28 levofloxacin
moxifloxacin
gyrA 7484 c.183T>C synonymous_variant 0.28 levofloxacin
moxifloxacin
gyrA 7514 c.213C>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7523 c.222C>A synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7532 c.231T>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7541 c.240C>G synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7547 c.246C>T synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7562 c.261C>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7571 c.270G>C synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7595 c.294C>G synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7601 c.300C>G synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7607 c.306C>G synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7619 c.318C>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 7622 c.321C>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7625 c.324G>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7631 c.330G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 7637 c.336C>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7652 c.351C>T synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7658 c.357A>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7664 c.363T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7673 c.372G>A synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7683 c.382_384delAGGinsCC frameshift_variant&missense_variant 0.29 levofloxacin
moxifloxacin
gyrA 7694 c.393A>G synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7697 c.396C>G synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7710 c.409_411delTTGinsCC frameshift_variant&missense_variant 0.3 levofloxacin
moxifloxacin
gyrA 7715 c.414G>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 7721 c.420G>A synonymous_variant 0.28 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7725 c.424C>T synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7728 c.427_429delAGGinsCC frameshift_variant&missense_variant 0.28 levofloxacin
moxifloxacin
gyrA 7739 c.438C>T synonymous_variant 0.3 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrA 7763 c.462T>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7784 c.483A>G synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 7793 c.492G>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 7796 c.495G>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 7799 c.498A>G synonymous_variant 0.22 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7814 c.513C>G synonymous_variant 0.2 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8198 c.897T>C synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8207 c.906T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8219 c.918T>C synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8225 c.924T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8234 c.933T>C synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8237 c.936A>G synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8247 c.946_948delATCinsGG frameshift_variant&missense_variant 0.28 levofloxacin
moxifloxacin
gyrA 8264 c.963T>C synonymous_variant 0.28 levofloxacin
moxifloxacin
gyrA 8267 c.966G>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8270 c.969G>T synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8276 c.975G>A synonymous_variant 0.27 levofloxacin
moxifloxacin
gyrA 8283 c.982_984delATCinsCG frameshift_variant&missense_variant 0.27 levofloxacin
moxifloxacin
gyrA 8288 c.987T>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8294 c.993T>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8324 c.1023T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 8330 c.1029C>G synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8337 c.1036_1038delCTAinsTG frameshift_variant&stop_gained 0.31 levofloxacin
moxifloxacin
gyrA 8342 c.1041G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 8357 c.1056G>A synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 8366 c.1065G>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 8367 c.1066C>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 8372 c.1071G>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 8375 c.1074G>C synonymous_variant 0.29 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 8382 p.Leu361Met missense_variant 0.3 levofloxacin
moxifloxacin
gyrA 8391 c.1090_1092delTATinsCC frameshift_variant&missense_variant 0.28 levofloxacin
moxifloxacin
gyrA 8399 c.1098T>C synonymous_variant 0.26 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8400 c.1099_1101delGACinsAT frameshift_variant&missense_variant 0.25 levofloxacin
moxifloxacin
gyrA 8417 c.1116C>G synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8420 c.1119T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8423 c.1122G>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8453 c.1152A>C synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8459 c.1158G>A synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8462 c.1161A>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8465 c.1164C>G synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8471 c.1170T>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8472 c.1171C>T synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8480 c.1179C>A synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8486 c.1185T>C synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8489 c.1188A>G synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8504 c.1203G>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8516 c.1215T>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8519 c.1218A>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8520 c.1219C>T synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8528 c.1227G>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8543 c.1242C>G synonymous_variant 0.24 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8546 c.1245T>C synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8553 c.1252C>A synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8561 c.1260A>C synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8588 c.1287G>A synonymous_variant 0.25 levofloxacin
moxifloxacin
gyrA 8603 c.1302A>G synonymous_variant 0.26 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8619 c.1318T>C synonymous_variant 0.24 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8624 c.1323G>C synonymous_variant 0.25 levofloxacin
moxifloxacin
gyrA 8636 c.1335A>C synonymous_variant 0.27 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8642 c.1341A>G synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8672 c.1371A>G synonymous_variant 0.23 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8678 c.1377G>A synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8693 c.1392T>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8696 c.1395G>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8699 c.1398A>G synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 8708 c.1407G>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8711 c.1410A>C synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8714 c.1413A>G synonymous_variant 0.23 levofloxacin
moxifloxacin
gyrA 8729 c.1428T>C synonymous_variant 0.21 levofloxacin
moxifloxacin
gyrA 8731 p.Gly477Ala missense_variant 0.21 levofloxacin
moxifloxacin
gyrA 8740 p.Arg480His missense_variant 0.25 levofloxacin
moxifloxacin
gyrA 8747 c.1446A>G synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8750 c.1449C>G synonymous_variant 0.24 levofloxacin
moxifloxacin
gyrA 8751 p.Ala484Ser missense_variant 0.24 levofloxacin
moxifloxacin
gyrA 8756 c.1455A>G synonymous_variant 0.24 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8762 c.1461G>C synonymous_variant 0.25 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8767 p.Arg489Lys missense_variant 0.25 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8780 p.Asp493Glu missense_variant 0.29 levofloxacin
moxifloxacin
gyrA 8786 c.1485T>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 8801 c.1500G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 8807 c.1506C>T synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 8810 c.1509A>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 8816 c.1515C>G synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 8818 p.Ser506Asn missense_variant 0.31 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8828 c.1527T>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8829 c.1528T>C synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8852 c.1551T>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 8858 c.1557T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 8867 c.1566A>G synonymous_variant 0.32 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8870 c.1569G>C synonymous_variant 0.31 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8873 c.1572A>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8891 c.1590G>A synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 8897 c.1596T>C synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8903 c.1602T>C synonymous_variant 0.36 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8933 c.1632G>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8939 c.1638T>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8942 c.1641G>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 8946 c.1645_1647delTTGinsCC frameshift_variant&missense_variant 0.36 levofloxacin
moxifloxacin
gyrA 8966 c.1665C>G synonymous_variant 0.37 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8967 p.Ala556Arg missense_variant 0.37 levofloxacin
moxifloxacin
gyrA 8987 c.1686C>G synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 8990 c.1689C>G synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 8996 c.1695T>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 8998 p.Leu566Trp missense_variant 0.37 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9017 c.1716C>G synonymous_variant 0.39 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9023 c.1722A>C synonymous_variant 0.38 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9029 c.1728T>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 9032 c.1731T>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 9035 c.1734G>C synonymous_variant 0.37 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 9050 p.Asp583Glu missense_variant 0.36 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9051 c.1750T>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9056 c.1755C>G synonymous_variant 0.38 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9062 c.1761C>G synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 9068 c.1767G>C synonymous_variant 0.37 levofloxacin
moxifloxacin
gyrA 9071 c.1770G>C synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 9080 c.1779G>T synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 9089 c.1788G>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 9099 c.1798_1800delTTAinsCG frameshift_variant&missense_variant 0.32 levofloxacin
moxifloxacin
gyrA 9104 c.1803C>G synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9119 c.1818A>G synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 9122 c.1821C>G synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9143 c.1842T>C synonymous_variant 0.34 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 9153 p.Thr618Glu missense_variant 0.3 levofloxacin
moxifloxacin
gyrA 9158 c.1857C>T synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9161 c.1860C>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 9182 c.1881T>C synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9191 c.1890G>C synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 9200 c.1899A>G synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9204 p.Ser635Thr missense_variant 0.33 levofloxacin
moxifloxacin
gyrA 9224 c.1923C>T synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 9230 c.1929T>C synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 9233 c.1932C>G synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 9239 c.1938C>T synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9252 p.Val651Ile missense_variant 0.33 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9284 c.1983T>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 9291 c.1990C>T synonymous_variant 0.25 levofloxacin
moxifloxacin
gyrA 9296 c.1995T>C synonymous_variant 0.21 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9299 c.1998G>C synonymous_variant 0.21 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9300 p.Ala667Ser missense_variant 0.21 levofloxacin
moxifloxacin
gyrA 9304 p.Gly668Glu missense_variant 1.0 levofloxacin
moxifloxacin
gyrA 9308 p.Asp669Glu missense_variant 0.21 levofloxacin
moxifloxacin
gyrA 9323 c.2022C>G synonymous_variant 0.21 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9335 c.2034G>C synonymous_variant 0.19 levofloxacin
moxifloxacin
gyrA 9344 c.2043C>T synonymous_variant 0.19 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
fgd1 490851 c.69A>T synonymous_variant 0.18 clofazimine
pretomanid
delamanid
fgd1 490869 c.87C>T synonymous_variant 0.18 clofazimine
pretomanid
delamanid
fgd1 490887 c.105G>A synonymous_variant 0.2 clofazimine
pretomanid
delamanid
fgd1 490890 c.108C>G synonymous_variant 0.2 clofazimine
pretomanid
delamanid
fgd1 490896 c.114C>T synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fgd1 490905 c.123T>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490911 c.129T>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fgd1 490917 c.135C>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490921 p.Gln47Glu missense_variant 0.24 clofazimine
pretomanid
delamanid
fgd1 490929 c.147C>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490932 c.150T>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490935 c.153C>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490948 p.Ser56Ala missense_variant 0.26 clofazimine
pretomanid
delamanid
fgd1 490962 c.180T>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fgd1 490974 c.192T>C synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fgd1 490977 c.195C>G synonymous_variant 0.26 clofazimine Not assoc w R - Interim
pretomanid
delamanid
fgd1 490980 p.Asn66Lys missense_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490983 c.201G>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490987 p.Leu69Thr missense_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 490998 c.216T>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fgd1 491001 c.219G>C synonymous_variant 0.3 clofazimine
pretomanid
delamanid
fgd1 491007 c.225G>C synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fgd1 491013 c.231C>G synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fgd1 491043 c.261T>G synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fgd1 491049 c.267T>C synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fgd1 491063 p.Gly94Ala missense_variant 0.28 clofazimine
pretomanid
delamanid
fgd1 491067 c.285C>T synonymous_variant 0.27 clofazimine Not assoc w R - Interim
pretomanid
delamanid
fgd1 491077 p.Asn99Gly missense_variant 0.24 clofazimine
pretomanid
delamanid
fgd1 491082 c.300T>C synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fgd1 491091 c.309T>C synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fgd1 491094 c.312C>G synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fgd1 491097 c.315G>C synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fgd1 491106 c.324T>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fgd1 491121 c.339A>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fgd1 491130 c.348C>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fgd1 491144 p.Ala121Asp missense_variant 0.23 clofazimine
pretomanid
delamanid
fgd1 491151 c.369G>A synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fgd1 491196 c.414A>G synonymous_variant 0.19 clofazimine
pretomanid
delamanid
fgd1 491202 c.420G>C synonymous_variant 0.2 clofazimine
pretomanid
delamanid
fgd1 491203 p.Gln141Glu missense_variant 0.2 clofazimine
pretomanid
delamanid
fgd1 491217 c.435T>C synonymous_variant 0.2 clofazimine
pretomanid
delamanid
fgd1 491232 c.450T>C synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fgd1 491591 p.Lys270Met missense_variant 0.87 clofazimine Not assoc w R
pretomanid
delamanid Uncertain significance
mshA 575581 c.234C>T synonymous_variant 0.18 ethionamide
isoniazid
mshA 575623 c.276C>G synonymous_variant 0.26 ethionamide
isoniazid
mshA 575629 c.282A>G synonymous_variant 0.27 ethionamide
isoniazid
mshA 575632 c.285G>C synonymous_variant 0.27 ethionamide
isoniazid
mshA 575635 c.288A>C synonymous_variant 0.27 ethionamide
isoniazid Not assoc w R - Interim
mshA 575638 c.291T>C synonymous_variant 0.26 ethionamide
isoniazid
mshA 575641 c.294A>G synonymous_variant 0.26 ethionamide
isoniazid
mshA 575647 c.300G>C synonymous_variant 0.26 ethionamide
isoniazid
mshA 575649 p.Val101Ala missense_variant 0.27 ethionamide
isoniazid
mshA 575659 c.312A>G synonymous_variant 0.3 ethionamide
isoniazid
mshA 575662 c.315C>G synonymous_variant 0.3 ethionamide
isoniazid
mshA 575674 c.327G>C synonymous_variant 0.32 ethionamide
isoniazid
mshA 575679 p.Asn111Ser missense_variant 0.67 ethionamide Not assoc w R
isoniazid Not assoc w R
mshA 575695 c.348C>G synonymous_variant 0.35 ethionamide
isoniazid Not assoc w R - Interim
mshA 575701 c.354G>A synonymous_variant 0.35 ethionamide
isoniazid
mshA 575704 c.357T>G synonymous_variant 0.36 ethionamide
isoniazid
mshA 575705 c.358T>C synonymous_variant 0.36 ethionamide
isoniazid
mshA 575713 c.366G>A synonymous_variant 0.36 ethionamide
isoniazid
mshA 575719 c.372C>T synonymous_variant 0.35 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
mshA 575734 c.387T>G synonymous_variant 0.36 ethionamide
isoniazid
mshA 575737 c.390T>C synonymous_variant 0.36 ethionamide
isoniazid
mshA 575746 c.399C>G synonymous_variant 0.36 ethionamide
isoniazid
mshA 575752 c.405G>C synonymous_variant 0.36 ethionamide
isoniazid
mshA 575755 c.408G>A synonymous_variant 0.37 ethionamide
isoniazid
mshA 575756 c.409C>T synonymous_variant 0.37 ethionamide
isoniazid
mshA 575770 c.423G>A synonymous_variant 0.36 ethionamide
isoniazid
mshA 575771 p.Val142Ser missense_variant 0.36 ethionamide
isoniazid
mshA 575779 c.432A>G synonymous_variant 0.39 ethionamide
isoniazid
mshA 575812 c.465C>T synonymous_variant 0.32 ethionamide
isoniazid
mshA 575821 c.474G>C synonymous_variant 0.31 ethionamide
isoniazid
mshA 575824 c.477T>G synonymous_variant 0.31 ethionamide
isoniazid
mshA 575830 c.483C>G synonymous_variant 0.31 ethionamide
isoniazid
mshA 575833 c.486C>G synonymous_variant 0.32 ethionamide
isoniazid
mshA 575864 c.517T>C synonymous_variant 0.28 ethionamide
isoniazid
mshA 575875 c.528C>G synonymous_variant 0.26 ethionamide
isoniazid
mshA 575878 c.531A>G synonymous_variant 0.26 ethionamide
isoniazid
mshA 575884 c.537G>C synonymous_variant 0.23 ethionamide
isoniazid
ccsA 619584 c.-307A>T upstream_gene_variant 0.17 capreomycin
amikacin
kanamycin
ccsA 619591 c.-300G>C upstream_gene_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 619594 c.-297G>T upstream_gene_variant 0.18 capreomycin
amikacin
kanamycin
ccsA 620295 c.405G>T synonymous_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 620310 c.420C>T synonymous_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 620317 c.427_429delGTCinsCG frameshift_variant&missense_variant 0.2 capreomycin
amikacin
kanamycin
ccsA 620340 c.450C>G synonymous_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 620346 c.456C>G synonymous_variant 0.21 capreomycin
amikacin
kanamycin
ccsA 620362 p.Ala158Thr missense_variant 0.22 capreomycin
amikacin
kanamycin
ccsA 620367 c.477T>C synonymous_variant 0.22 capreomycin
amikacin
kanamycin
ccsA 620373 c.483C>G synonymous_variant 0.22 capreomycin
amikacin
kanamycin
ccsA 620376 c.486G>C synonymous_variant 0.22 capreomycin
amikacin
kanamycin
ccsA 620385 c.495G>C synonymous_variant 0.2 capreomycin
amikacin
kanamycin
ccsA 620388 c.498A>G synonymous_variant 0.2 capreomycin
amikacin
kanamycin
ccsA 620389 c.499C>T synonymous_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 620412 c.522T>C synonymous_variant 0.19 capreomycin
amikacin
kanamycin
ccsA 620415 c.525T>C synonymous_variant 0.2 capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
Rv0565c 656402 p.Ala357Thr missense_variant 0.18 ethionamide
Rv0565c 656448 c.1023T>C synonymous_variant 0.2 ethionamide
Rv0565c 656454 c.1017G>C synonymous_variant 0.2 ethionamide
Rv0565c 657220 p.Ala84Val missense_variant 0.18 ethionamide
Rv0565c 657231 c.238_240delATCinsGG frameshift_variant&missense_variant 0.21 ethionamide Uncertain significance
Rv0565c 657237 c.234A>G synonymous_variant 0.21 ethionamide
Rv0565c 657269 p.Ser68Pro missense_variant 0.82 ethionamide Uncertain significance
Rv0565c 657300 c.171C>T synonymous_variant 0.18 ethionamide
Rv0565c 657337 p.Arg45Gln missense_variant 0.19 ethionamide Uncertain significance
Rv0565c 657734 c.-264T>C upstream_gene_variant 0.26 ethionamide
hadA 731732 c.-198G>A upstream_gene_variant 0.18 isoniazid
hadA 732305 p.Ile126Val missense_variant 0.19 isoniazid
hadA 732308 p.Val127Ile missense_variant 0.2 isoniazid
hadA 732321 p.Glu131Ala missense_variant 0.22 isoniazid
hadA 732329 p.Leu134Val missense_variant 0.24 isoniazid Uncertain significance
hadA 732337 c.408G>A synonymous_variant 0.25 isoniazid
hadA 732378 c.450_452dupAGA disruptive_inframe_insertion 0.34 isoniazid
hadA 732396 p.Gly156Ala missense_variant 0.34 isoniazid
hadA 732398 p.Ala157Thr missense_variant 0.34 isoniazid
nusG 734424 c.171G>A synonymous_variant 0.2 rifampicin
nusG 734442 c.189G>A synonymous_variant 0.22 rifampicin
nusG 734451 c.198G>C synonymous_variant 0.25 rifampicin
nusG 734457 c.204C>G synonymous_variant 0.26 rifampicin
nusG 734472 c.219T>C synonymous_variant 0.28 rifampicin
nusG 734475 c.222T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
nusG 734532 c.279A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
nusG 734556 c.303C>T synonymous_variant 0.34 rifampicin
nusG 734559 c.306T>C synonymous_variant 0.35 rifampicin
nusG 734580 c.327T>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
nusG 734589 c.336G>C synonymous_variant 0.36 rifampicin
nusG 734596 c.343T>C synonymous_variant 0.35 rifampicin
nusG 734601 c.348C>G synonymous_variant 0.35 rifampicin
nusG 734610 c.357C>G synonymous_variant 0.32 rifampicin
nusG 734619 c.366G>C synonymous_variant 0.3 rifampicin
nusG 734625 c.372T>C synonymous_variant 0.26 rifampicin
nusG 734631 c.378G>C synonymous_variant 0.26 rifampicin
nusG 734634 c.381G>C synonymous_variant 0.25 rifampicin
nusG 734637 c.384G>C synonymous_variant 0.24 rifampicin
nusG 734643 c.390G>C synonymous_variant 0.24 rifampicin
nusG 734652 c.399T>C synonymous_variant 0.22 rifampicin
nusG 734658 c.405A>G synonymous_variant 0.2 rifampicin Not assoc w R
rpoB 760112 c.306T>C synonymous_variant 0.21 rifampicin
rpoB 760115 c.309C>T synonymous_variant 0.79 rifampicin Not assoc w R
rpoB 760118 c.312T>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 760121 c.315T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760130 p.Asp108Glu missense_variant 0.25 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 760142 c.336C>G synonymous_variant 0.24 rifampicin
rpoB 760181 c.375T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoB 760223 c.417T>C synonymous_variant 0.4 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 760283 c.477G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.43 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.43 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.44 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.44 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760361 c.555T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.45 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.43 rifampicin Uncertain significance
rpoB 760380 p.Thr192Leu missense_variant 0.43 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.44 rifampicin
rpoB 760412 c.606C>G synonymous_variant 0.45 rifampicin
rpoB 760424 c.618C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760522 p.Ser239Asn missense_variant 0.44 rifampicin Uncertain significance
rpoB 760532 c.726T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760533 p.Val243Thr missense_variant 0.41 rifampicin
rpoB 760541 c.735G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 760547 c.741G>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 760563 p.Arg253Met missense_variant 0.42 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.48 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760634 c.828T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760655 c.849A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.43 rifampicin
rpoB 760674 c.868T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760718 c.912C>T synonymous_variant 0.4 rifampicin
rpoB 760724 c.918T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 760730 c.924T>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 760751 c.945G>C synonymous_variant 0.29 rifampicin
rpoB 760757 c.951T>C synonymous_variant 0.27 rifampicin
rpoB 760759 p.Val318Ala missense_variant 0.24 rifampicin
rpoB 760769 c.963C>G synonymous_variant 0.23 rifampicin
rpoB 760775 c.969G>C synonymous_variant 0.23 rifampicin
rpoB 760776 c.970_972delTCGinsAGC synonymous_variant 0.23 rifampicin
rpoB 760793 c.987A>G synonymous_variant 0.23 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.21 rifampicin
rpoB 760886 c.1080A>G synonymous_variant 0.23 rifampicin
rpoB 760925 c.1119T>C synonymous_variant 0.26 rifampicin
rpoB 760928 c.1122G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 760931 c.1125C>G synonymous_variant 0.25 rifampicin
rpoB 760934 c.1128C>T synonymous_variant 0.26 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoB 760982 c.1176G>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 760985 c.1179G>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>C synonymous_variant 0.4 rifampicin
rpoB 761006 c.1200C>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 761021 c.1215G>C synonymous_variant 0.39 rifampicin
rpoB 761027 c.1221A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 761057 c.1251G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 761102 c.1296A>G synonymous_variant 0.52 rifampicin
rpoB 761129 c.1323G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 761132 c.1326G>T synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761153 c.1347G>C synonymous_variant 0.51 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 761180 c.1374A>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 761189 c.1383T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 761207 c.1401C>T synonymous_variant 0.49 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 0.47 rifampicin
rpoB 761219 c.1413G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 761306 c.1500C>G synonymous_variant 0.43 rifampicin
rpoB 761312 c.1506G>C synonymous_variant 0.45 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 761330 c.1524G>C synonymous_variant 0.44 rifampicin
rpoB 761354 c.1548C>T synonymous_variant 0.41 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.38 rifampicin
rpoB 761373 p.Val523His missense_variant 0.37 rifampicin
rpoB 761408 c.1602G>C synonymous_variant 0.37 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 761423 c.1617T>C synonymous_variant 0.35 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.31 rifampicin
rpoB 761438 c.1632G>C synonymous_variant 0.31 rifampicin
rpoB 761439 c.1633_1635delGACinsAG frameshift_variant&missense_variant 0.31 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 0.32 rifampicin
rpoB 761447 c.1641C>G synonymous_variant 0.32 rifampicin
rpoB 761452 p.Val549Glu missense_variant 0.32 rifampicin
rpoB 761457 p.Pro551Ser missense_variant 0.32 rifampicin
rpoB 761465 c.1659G>C synonymous_variant 0.35 rifampicin
rpoB 761477 c.1671C>G synonymous_variant 0.34 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.35 rifampicin
rpoB 761510 c.1704T>C synonymous_variant 0.34 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 761588 c.1782C>T synonymous_variant 0.35 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.34 rifampicin
rpoB 761612 c.1806G>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 761645 c.1839C>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 761648 c.1842T>C synonymous_variant 0.45 rifampicin
rpoB 761657 c.1851C>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 761675 c.1869G>C synonymous_variant 0.43 rifampicin
rpoB 761720 c.1914_1916delCGAinsGG frameshift_variant&synonymous_variant 0.4 rifampicin
rpoB 761727 p.Ser641Gly missense_variant 0.4 rifampicin
rpoB 761728 c.1923dupC frameshift_variant 0.4 rifampicin
rpoB 761732 c.1926C>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 761735 c.1929C>G synonymous_variant 0.4 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.42 rifampicin
rpoB 761750 c.1944G>C synonymous_variant 0.43 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.41 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.4 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.4 rifampicin
rpoB 761791 p.Arg662His missense_variant 0.4 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.42 rifampicin
rpoB 761815 p.Ala670Glu missense_variant 0.41 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.42 rifampicin
rpoB 761848 p.Cys681Ser missense_variant 0.37 rifampicin
rpoB 761852 c.2046C>G synonymous_variant 0.38 rifampicin
rpoB 761858 c.2052G>C synonymous_variant 0.38 rifampicin
rpoB 761873 c.2067A>C synonymous_variant 0.39 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 0.38 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.34 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.32 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.33 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.32 rifampicin
rpoB 761916 p.Asp704Asn missense_variant 0.33 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 762008 c.2202C>T synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 762014 c.2208C>T synonymous_variant 0.41 rifampicin
rpoB 762017 c.2211A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.45 rifampicin Uncertain significance
rpoB 762131 c.2325C>G synonymous_variant 0.45 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.47 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762206 c.2400C>G synonymous_variant 0.43 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 762246 c.2440C>T synonymous_variant 0.41 rifampicin
rpoB 762254 c.2448T>G synonymous_variant 0.41 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.41 rifampicin
rpoB 762266 c.2460T>C synonymous_variant 0.4 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoB 762317 c.2511A>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.4 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.41 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.38 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.39 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.39 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.38 rifampicin
rpoB 762404 c.2598T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 762410 c.-960T>C upstream_gene_variant 0.39 rifampicin
rpoB 762416 c.2610A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 762419 c.-951C>G upstream_gene_variant 0.4 rifampicin
rpoC 762434 c.-936T>C upstream_gene_variant 0.36 rifampicin
rpoB 762449 c.2643C>A synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 762467 c.-903C>T upstream_gene_variant 0.31 rifampicin
rpoB 762488 c.2682G>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 762489 p.Val895Gln missense_variant 0.25 rifampicin
rpoC 762509 c.-861T>G upstream_gene_variant 0.23 rifampicin
rpoB 762510 c.2704_2706delGCCinsCG frameshift_variant&missense_variant 0.23 rifampicin
rpoC 762521 c.-849C>T upstream_gene_variant 0.23 rifampicin
rpoC 762533 c.-837T>C upstream_gene_variant 0.21 rifampicin
rpoC 762536 c.-834T>C upstream_gene_variant 0.21 rifampicin
rpoC 762551 c.-819C>G upstream_gene_variant 0.19 rifampicin
rpoB 762789 p.Leu995Met missense_variant 0.17 rifampicin Uncertain significance
rpoB 762810 c.3004_3006delGCCinsTG frameshift_variant&missense_variant 0.19 rifampicin
rpoB 762813 p.Met1003Val missense_variant 0.21 rifampicin
rpoB 762818 c.3012C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 762827 c.3021G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 762863 c.3057T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 762989 c.-381G>C upstream_gene_variant 0.59 rifampicin
rpoB 762995 c.3189G>T synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763013 c.-357C>G upstream_gene_variant 0.54 rifampicin
rpoB 763028 c.3222T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 763148 c.-222G>C upstream_gene_variant 0.42 rifampicin
rpoC 763158 c.-212C>T upstream_gene_variant 0.4 rifampicin
rpoB 763166 c.3360A>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 763190 c.-180C>T upstream_gene_variant 0.36 rifampicin
rpoC 763202 c.-168A>G upstream_gene_variant 0.3 rifampicin
rpoC 763205 c.-165G>C upstream_gene_variant 0.3 rifampicin
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.31 rifampicin
rpoB 763214 c.3408T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 763226 c.-144A>G upstream_gene_variant 0.35 rifampicin
rpoB 763227 c.3421C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoB 763238 c.3432T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 763253 c.-117G>C upstream_gene_variant 0.3 rifampicin
rpoC 763256 c.-114G>A upstream_gene_variant 0.3 rifampicin
rpoB 763268 c.3462C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 763283 c.3477T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763284 c.-86C>T upstream_gene_variant 0.25 rifampicin
rpoC 763310 c.-60C>T upstream_gene_variant 0.22 rifampicin
rpoB 763316 c.3510T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 763319 c.-51T>C upstream_gene_variant 0.22 rifampicin
rpoC 763322 c.-48G>C upstream_gene_variant 0.22 rifampicin
rpoC 763325 c.-44_-37delAGCTGTCG upstream_gene_variant 0.23 rifampicin
rpoC 763338 c.-32delAinsCGTTTTCAG upstream_gene_variant 0.22 rifampicin
rpoC 763351 c.-19T>C upstream_gene_variant 0.28 rifampicin Uncertain significance
rpoC 763352 c.-18T>A upstream_gene_variant 0.28 rifampicin Uncertain significance
rpoC 763402 c.33C>G synonymous_variant 0.36 rifampicin
rpoC 763411 c.42T>G synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 763414 c.45T>C synonymous_variant 0.36 rifampicin
rpoC 763441 c.72C>T synonymous_variant 0.37 rifampicin
rpoC 763444 c.75T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>G synonymous_variant 0.42 rifampicin
rpoC 763528 c.159G>A synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 763573 c.204G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 763603 c.234C>T synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763633 c.264T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.43 rifampicin
rpoC 763660 c.291T>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.42 rifampicin
rpoC 763732 c.363C>G synonymous_variant 0.44 rifampicin
rpoC 763741 c.372C>T synonymous_variant 0.43 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.43 rifampicin
rpoC 763765 c.396T>C synonymous_variant 0.44 rifampicin
rpoC 763774 c.405G>C synonymous_variant 0.43 rifampicin
rpoC 763807 c.438T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.37 rifampicin
rpoC 763835 p.Ala156Met missense_variant 0.36 rifampicin
rpoC 763853 p.Val162Ile missense_variant 0.38 rifampicin
rpoC 763858 c.489A>G synonymous_variant 0.37 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 0.37 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 0.36 rifampicin
rpoC 763879 c.510A>G synonymous_variant 0.37 rifampicin
rpoC 763888 c.519G>C synonymous_variant 0.36 rifampicin
rpoC 763891 c.522G>C synonymous_variant 0.36 rifampicin
rpoC 763894 c.525A>G synonymous_variant 0.37 rifampicin
rpoC 763900 c.531G>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 763936 c.567C>G synonymous_variant 0.34 rifampicin
rpoC 763939 c.570G>A synonymous_variant 0.33 rifampicin
rpoC 763942 c.573C>G synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 763945 c.576T>C synonymous_variant 0.33 rifampicin
rpoC 763948 c.579G>A synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 763949 c.580C>A synonymous_variant 0.34 rifampicin
rpoC 763954 c.585C>G synonymous_variant 0.33 rifampicin
rpoC 763960 c.591T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 763987 c.618C>T synonymous_variant 0.31 rifampicin
rpoC 763991 c.622_624delATCinsCG frameshift_variant&missense_variant 0.31 rifampicin
rpoC 763996 c.627T>C synonymous_variant 0.31 rifampicin
rpoC 764002 c.633C>G synonymous_variant 0.33 rifampicin
rpoC 764005 c.636G>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 764024 c.655_657delTTGinsCC frameshift_variant&missense_variant 0.34 rifampicin
rpoC 764032 p.Asp221Glu missense_variant 0.35 rifampicin
rpoC 764040 p.Ser224Thr missense_variant 0.35 rifampicin
rpoC 764044 c.675T>C synonymous_variant 0.36 rifampicin
rpoC 764059 c.690G>T synonymous_variant 0.37 rifampicin
rpoC 764083 c.714A>G synonymous_variant 0.38 rifampicin
rpoC 764098 c.729A>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764101 c.732C>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764102 p.Val245Ile missense_variant 0.36 rifampicin
rpoC 764112 p.Tyr248Phe missense_variant 0.39 rifampicin
rpoC 764116 c.747C>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.44 rifampicin
rpoC 764140 c.771C>T synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764188 c.819A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764195 p.Ser276Ile missense_variant 0.45 rifampicin
rpoC 764203 c.834G>C synonymous_variant 0.44 rifampicin
rpoC 764206 c.837T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 764215 c.846A>G synonymous_variant 0.46 rifampicin
rpoC 764236 c.867G>A synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764248 c.879C>G synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 764257 c.888G>C synonymous_variant 0.42 rifampicin
rpoC 764266 c.897T>C synonymous_variant 0.4 rifampicin
rpoC 764269 c.900G>C synonymous_variant 0.4 rifampicin
rpoC 764272 c.903G>C synonymous_variant 0.41 rifampicin
rpoC 764278 c.909A>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764338 c.969G>A synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764353 c.984G>C synonymous_variant 0.37 rifampicin
rpoC 764365 c.996C>T synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764380 c.1011G>C synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.35 rifampicin
rpoC 764387 c.1018_1020delTTGinsCC frameshift_variant&missense_variant 0.35 rifampicin
rpoC 764405 c.1036A>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764419 c.1050C>G synonymous_variant 0.38 rifampicin
rpoC 764428 c.1059G>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764431 c.1062G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.39 rifampicin
rpoC 764449 c.1080G>C synonymous_variant 0.39 rifampicin
rpoC 764452 c.1083T>C synonymous_variant 0.38 rifampicin
rpoC 764458 c.1089G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764489 c.1120C>T synonymous_variant 0.4 rifampicin
rpoC 764497 c.1128A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764510 c.1141C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764527 c.1158C>T synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.34 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.35 rifampicin
rpoC 764560 c.1191T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764581 c.1212T>C synonymous_variant 0.37 rifampicin
rpoC 764593 c.1224C>T synonymous_variant 0.4 rifampicin
rpoC 764611 c.1242G>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>C synonymous_variant 0.39 rifampicin
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 0.4 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.48 rifampicin Not assoc w R
rpoC 764815 c.1446A>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764872 c.1503A>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764911 c.1542A>G synonymous_variant 0.44 rifampicin
rpoC 764932 c.1563C>A synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764935 c.1566T>C synonymous_variant 0.39 rifampicin
rpoC 764948 c.1579T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764995 c.1626C>G synonymous_variant 0.35 rifampicin Not assoc w R
rpoC 765019 c.1650A>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765034 c.1665T>C synonymous_variant 0.3 rifampicin
rpoC 765040 c.1671T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.3 rifampicin
rpoC 765073 c.1704G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765076 c.1707A>G synonymous_variant 0.29 rifampicin
rpoC 765079 c.1710T>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765082 c.1713G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765089 c.1720T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765103 c.1734G>T synonymous_variant 0.31 rifampicin
rpoC 765150 p.Gly594Glu missense_variant 0.89 rifampicin Not assoc w R
rpoC 765383 p.Met672Leu missense_variant 0.23 rifampicin Uncertain significance
rpoC 765404 p.Leu679Val missense_variant 0.28 rifampicin
rpoC 765409 c.2040T>C synonymous_variant 0.28 rifampicin
rpoC 765421 c.2052C>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765478 c.2109T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 765499 c.2130C>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 765529 c.2160C>T synonymous_variant 0.49 rifampicin
rpoC 765541 c.2172C>G synonymous_variant 0.47 rifampicin
rpoC 765553 c.2184C>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.47 rifampicin
rpoC 765559 c.2190G>C synonymous_variant 0.46 rifampicin
rpoC 765580 c.2211G>C synonymous_variant 0.5 rifampicin
rpoC 765613 p.His748Gln missense_variant 0.47 rifampicin
rpoC 765625 c.2256C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 765631 p.Asp754Glu missense_variant 0.47 rifampicin
rpoC 765700 c.2331T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 765734 c.2365T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765739 c.2370G>T synonymous_variant 0.42 rifampicin
rpoC 765751 c.2382C>G synonymous_variant 0.41 rifampicin
rpoC 765753 p.Asp795Ala missense_variant 0.42 rifampicin Uncertain significance
rpoC 765763 c.2394G>A synonymous_variant 0.44 rifampicin
rpoC 765772 c.2403C>G synonymous_variant 0.44 rifampicin
rpoC 765784 c.2415C>G synonymous_variant 0.42 rifampicin
rpoC 765787 c.2418C>T synonymous_variant 0.42 rifampicin
rpoC 765793 c.2424C>G synonymous_variant 0.43 rifampicin
rpoC 765796 c.2427C>T synonymous_variant 0.44 rifampicin
rpoC 765811 c.2442T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 765814 c.2445A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 765826 c.2457T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 765850 c.2481G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 765883 c.2514C>G synonymous_variant 0.46 rifampicin
rpoC 765886 c.2517C>G synonymous_variant 0.46 rifampicin
rpoC 765892 c.2523T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 765937 c.2568T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 765967 c.2598C>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>G synonymous_variant 0.49 rifampicin
rpoC 765994 c.2625A>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.45 rifampicin
rpoC 766021 c.2652G>C synonymous_variant 0.4 rifampicin
rpoC 766027 c.2658G>C synonymous_variant 0.41 rifampicin
rpoC 766043 p.Gln892Glu missense_variant 0.39 rifampicin
rpoC 766054 c.2685C>G synonymous_variant 0.4 rifampicin
rpoC 766082 p.Ala905Gln missense_variant 0.37 rifampicin
rpoC 766096 c.2727G>C synonymous_variant 0.39 rifampicin
rpoC 766129 c.2760C>G synonymous_variant 0.38 rifampicin
rpoC 766135 c.2766G>A synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 766141 c.2772C>T synonymous_variant 0.34 rifampicin
rpoC 766142 c.2773C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 766174 p.Asn935Lys missense_variant 0.3 rifampicin
rpoC 766178 p.Ile937Val missense_variant 0.29 rifampicin
rpoC 766185 p.Glu939Ala missense_variant 0.26 rifampicin
rpoC 766189 c.2820T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 766192 c.2823T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 766193 c.2824_2826delCAAinsGG frameshift_variant&missense_variant 0.24 rifampicin
rpoC 766204 c.2835C>T synonymous_variant 0.25 rifampicin
rpoC 766207 c.2838T>C synonymous_variant 0.25 rifampicin
rpoC 766216 c.2847T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766219 p.Asp950Glu missense_variant 0.26 rifampicin
rpoC 766222 c.2853T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766226 c.2857T>C synonymous_variant 0.26 rifampicin
rpoC 766231 c.2862T>G synonymous_variant 0.26 rifampicin
rpoC 766234 c.2865T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766237 c.2868T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766240 c.2871T>C synonymous_variant 0.27 rifampicin
rpoC 766243 c.2874C>G synonymous_variant 0.26 rifampicin
rpoC 766258 c.2889T>C synonymous_variant 0.31 rifampicin
rpoC 766273 c.2904T>C synonymous_variant 0.34 rifampicin
rpoC 766274 p.Ala969Thr missense_variant 0.34 rifampicin
rpoC 766280 p.Ser971Gly missense_variant 0.34 rifampicin
rpoC 766288 c.2919C>G synonymous_variant 0.32 rifampicin
rpoC 766303 c.2934C>T synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 766312 c.2943T>G synonymous_variant 0.37 rifampicin
rpoC 766327 c.2958C>A synonymous_variant 0.36 rifampicin
rpoC 766345 c.2976T>C synonymous_variant 0.36 rifampicin
rpoC 766348 c.2979A>G synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.39 rifampicin
rpoC 766363 c.2994G>C synonymous_variant 0.39 rifampicin
rpoC 766366 c.2997C>G synonymous_variant 0.38 rifampicin
rpoC 766381 c.3012C>T synonymous_variant 0.42 rifampicin
rpoC 766384 c.3015A>G synonymous_variant 0.44 rifampicin
rpoC 766390 c.3021C>T synonymous_variant 0.43 rifampicin
rpoC 766408 c.3039C>G synonymous_variant 0.43 rifampicin
rpoC 766411 c.3042C>G synonymous_variant 0.45 rifampicin
rpoC 766426 c.3057C>T synonymous_variant 0.46 rifampicin
rpoC 766447 c.3078T>C synonymous_variant 0.43 rifampicin
rpoC 766462 c.3093G>C synonymous_variant 0.44 rifampicin
rpoC 766483 c.3114G>C synonymous_variant 0.44 rifampicin
rpoC 766484 c.3115_3117delGTAinsAC frameshift_variant&missense_variant 0.44 rifampicin
rpoC 766492 c.3123T>C synonymous_variant 0.48 rifampicin
rpoC 766522 c.3153C>G synonymous_variant 0.46 rifampicin
rpoC 766528 c.3159T>C synonymous_variant 0.45 rifampicin
rpoC 766531 c.3162G>C synonymous_variant 0.46 rifampicin
rpoC 766540 p.Asp1057Glu missense_variant 0.45 rifampicin
rpoC 766549 c.3180G>C synonymous_variant 0.47 rifampicin
rpoC 766573 c.3204T>C synonymous_variant 0.48 rifampicin
rpoC 766582 c.3213C>G synonymous_variant 0.45 rifampicin
rpoC 766583 c.3214_3216delGGTinsAC frameshift_variant&missense_variant 0.44 rifampicin
rpoC 766588 p.Glu1073Asp missense_variant 0.44 rifampicin Uncertain significance
rpoC 766591 c.3222A>G synonymous_variant 0.44 rifampicin
rpoC 766594 c.3225G>C synonymous_variant 0.44 rifampicin
rpoC 766597 c.3228C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 766607 p.Ile1080Leu missense_variant 0.47 rifampicin
rpoC 766630 c.3261G>C synonymous_variant 0.46 rifampicin
rpoC 766657 c.3288A>G synonymous_variant 0.44 rifampicin
rpoC 766660 c.3291G>C synonymous_variant 0.44 rifampicin
rpoC 766672 c.3303T>C synonymous_variant 0.4 rifampicin
rpoC 766673 p.Gly1102Asn missense_variant 0.4 rifampicin
rpoC 766726 c.3357T>C synonymous_variant 0.43 rifampicin
rpoC 766738 c.3369G>C synonymous_variant 0.42 rifampicin
rpoC 766765 c.3396A>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 766774 c.3405T>C synonymous_variant 0.42 rifampicin
rpoC 766801 c.3432C>G synonymous_variant 0.41 rifampicin
rpoC 766804 c.3435A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 766864 c.3495G>C synonymous_variant 0.45 rifampicin
rpoC 766876 c.3507C>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoC 766882 c.3513C>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 766900 c.3531T>C synonymous_variant 0.47 rifampicin
rpoC 766933 c.3564A>G synonymous_variant 0.47 rifampicin
rpoC 766945 c.3576A>G synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.5 rifampicin
rpoC 766996 c.3627C>T synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.45 rifampicin
rpoC 767014 c.3645G>C synonymous_variant 0.46 rifampicin
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.47 rifampicin
rpoC 767059 c.3690T>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>A synonymous_variant 0.43 rifampicin
rpoC 767098 c.3729T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 767119 c.3750A>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>A synonymous_variant 0.33 rifampicin
rpoC 767158 c.3789T>G synonymous_variant 0.33 rifampicin
rpoC 767180 p.Ala1271Gln missense_variant 0.29 rifampicin
rpoC 767191 c.3822C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 767206 c.3837C>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 767209 c.3840T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 767212 c.3843G>C synonymous_variant 0.27 rifampicin
rpoC 767221 c.3852C>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 clofazimine Not assoc w R
bedaquiline Not assoc w R - Interim
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781628 c.69T>C synonymous_variant 0.21 streptomycin Not assoc w R - Interim
rpsL 781629 c.70_72delCTGinsTC frameshift_variant&missense_variant 0.79 streptomycin Uncertain significance
rpsL 781649 c.90T>C synonymous_variant 0.3 streptomycin
rpsL 781655 c.96T>C synonymous_variant 0.31 streptomycin
rpsL 781700 c.141G>C synonymous_variant 0.37 streptomycin
rpsL 781703 c.144G>T synonymous_variant 0.37 streptomycin
rpsL 781715 c.156T>C synonymous_variant 0.39 streptomycin
rpsL 781728 c.169T>C synonymous_variant 0.4 streptomycin
rpsL 781736 c.177T>C synonymous_variant 0.41 streptomycin
rpsL 781742 c.183C>T synonymous_variant 0.46 streptomycin
rpsL 781748 c.189C>G synonymous_variant 0.45 streptomycin
rpsL 781754 c.195G>C synonymous_variant 0.46 streptomycin
rpsL 781760 c.201T>C synonymous_variant 0.45 streptomycin
rpsL 781772 c.213C>A synonymous_variant 0.46 streptomycin
rpsL 781808 c.249C>T synonymous_variant 0.47 streptomycin
rpsL 781811 c.252C>T synonymous_variant 0.47 streptomycin
rpsL 781832 c.273T>C synonymous_variant 0.43 streptomycin
rpsL 781838 c.279G>C synonymous_variant 0.45 streptomycin
rpsL 781841 c.282C>G synonymous_variant 0.45 streptomycin
rpsL 781865 c.306G>C synonymous_variant 0.46 streptomycin
rpsL 781868 c.309T>C synonymous_variant 0.45 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.45 streptomycin
rpsL 781877 c.318T>C synonymous_variant 0.45 streptomycin
rpsL 781892 c.333A>G synonymous_variant 0.49 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.48 streptomycin
rpsL 781916 c.357T>C synonymous_variant 0.49 streptomycin
rpsL 781929 p.Gly124Ser missense_variant 0.46 streptomycin Uncertain significance
rplC 800582 c.-227C>G upstream_gene_variant 0.23 linezolid
rplC 800612 c.-197A>G upstream_gene_variant 0.25 linezolid
rplC 800618 c.-191T>C upstream_gene_variant 0.27 linezolid
rplC 800627 c.-182C>T upstream_gene_variant 0.27 linezolid
rplC 800648 c.-161A>T upstream_gene_variant 0.29 linezolid
rplC 800654 c.-155T>C upstream_gene_variant 0.32 linezolid
rplC 800693 c.-116A>G upstream_gene_variant 0.32 linezolid
rplC 800703 c.-106T>C upstream_gene_variant 0.32 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 0.32 linezolid
rplC 800720 c.-89T>C upstream_gene_variant 0.32 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 0.33 linezolid
rplC 800747 c.-62C>G upstream_gene_variant 0.38 linezolid
rplC 800771 c.-38C>T upstream_gene_variant 0.36 linezolid
rplC 800794 c.-15A>G upstream_gene_variant 0.32 linezolid
rplC 800796 c.-13A>G upstream_gene_variant 0.32 linezolid
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.32 linezolid
rplC 800814 c.6A>G synonymous_variant 0.34 linezolid
rplC 800817 c.9A>T synonymous_variant 0.34 linezolid
rplC 800844 c.36T>C synonymous_variant 0.32 linezolid
rplC 800865 c.57A>G synonymous_variant 0.29 linezolid
rplC 800867 p.Ser20Asn missense_variant 0.29 linezolid
rplC 800874 c.66A>G synonymous_variant 0.27 linezolid
rplC 800875 c.67_69delGTAinsAT frameshift_variant&missense_variant 0.27 linezolid
rplC 800880 c.72A>G synonymous_variant 0.26 linezolid
rplC 800889 c.81C>G synonymous_variant 0.28 linezolid
rplC 800892 c.84G>C synonymous_variant 0.29 linezolid
rplC 800907 c.99C>G synonymous_variant 0.27 linezolid
rplC 800916 c.108A>G synonymous_variant 0.25 linezolid
rplC 800934 c.126C>G synonymous_variant 0.24 linezolid
rplC 800937 c.129A>G synonymous_variant 0.24 linezolid
rplC 800939 p.Arg44Gln missense_variant 0.24 linezolid
rplC 800946 c.138T>C synonymous_variant 0.24 linezolid
rplC 800949 c.141T>C synonymous_variant 0.24 linezolid
rplC 800967 c.159C>G synonymous_variant 0.25 linezolid
rplC 800970 c.162T>C synonymous_variant 0.25 linezolid Not assoc w R - Interim
rplC 800982 c.174C>T synonymous_variant 0.2 linezolid
rplC 800985 c.177A>G synonymous_variant 0.2 linezolid
rplC 801004 p.Leu66Val missense_variant 0.18 linezolid
rplC 801009 c.201A>C synonymous_variant 0.18 linezolid
rplC 801019 p.Thr71Ala missense_variant 0.19 linezolid
rplC 801027 c.219C>G synonymous_variant 0.19 linezolid
rplC 801047 p.Tyr80Phe missense_variant 0.18 linezolid
rplC 801049 c.241C>T synonymous_variant 0.19 linezolid
rplC 801054 c.246G>C synonymous_variant 0.19 linezolid
rplC 801070 p.Asp88Asn missense_variant 0.18 linezolid
rplC 801127 p.Ala107Thr missense_variant 0.2 linezolid
rplC 801132 c.324T>C synonymous_variant 0.2 linezolid
rplC 801147 c.339T>C synonymous_variant 0.21 linezolid
rplC 801150 c.342G>C synonymous_variant 0.2 linezolid
rplC 801153 c.345G>C synonymous_variant 0.2 linezolid
rplC 801156 c.348T>A synonymous_variant 0.2 linezolid
rplC 801168 c.360C>G synonymous_variant 0.23 linezolid
rplC 801171 c.363A>G synonymous_variant 0.25 linezolid
rplC 801174 c.366T>C synonymous_variant 0.26 linezolid
rplC 801195 c.387G>C synonymous_variant 0.28 linezolid
rplC 801207 c.399C>T synonymous_variant 0.29 linezolid
rplC 801246 c.438C>T synonymous_variant 0.25 linezolid
rplC 801249 c.441T>C synonymous_variant 0.24 linezolid
rplC 801255 c.447C>T synonymous_variant 0.24 linezolid
rplC 801264 c.456C>T synonymous_variant 0.23 linezolid
rplC 801267 c.459A>T synonymous_variant 0.22 linezolid
rplC 801270 c.462T>C synonymous_variant 0.22 linezolid
rplC 801276 c.468G>C synonymous_variant 0.22 linezolid
rplC 801279 c.471G>C synonymous_variant 0.22 linezolid
rplC 801282 c.474G>C synonymous_variant 0.23 linezolid
rplC 801285 c.477G>C synonymous_variant 0.23 linezolid
rplC 801300 c.492C>G synonymous_variant 0.24 linezolid
rplC 801309 c.501C>G synonymous_variant 0.24 linezolid
rplC 801312 c.504G>C synonymous_variant 0.24 linezolid
rplC 801321 c.513C>T synonymous_variant 0.24 linezolid Not assoc w R - Interim
rplC 801324 c.516T>C synonymous_variant 0.23 linezolid
rplC 801339 c.531T>C synonymous_variant 0.23 linezolid
rplC 801341 p.Leu178Gln missense_variant 0.23 linezolid
rplC 801348 c.540T>G synonymous_variant 0.25 linezolid
rplC 801357 c.549T>C synonymous_variant 0.25 linezolid
rplC 801367 p.Ala187Thr missense_variant 0.27 linezolid
rplC 801402 c.594T>C synonymous_variant 0.26 linezolid
rplC 801405 c.597T>C synonymous_variant 0.26 linezolid
rplC 801423 c.615G>C synonymous_variant 0.26 linezolid
rplC 801426 c.618C>G synonymous_variant 0.26 linezolid
rplC 801427 p.Met207Val missense_variant 0.27 linezolid
rplC 801438 c.630T>C synonymous_variant 0.3 linezolid
rplC 801442 p.Ile212Val missense_variant 0.31 linezolid
fbiC 1303530 c.600G>A synonymous_variant 0.19 clofazimine
pretomanid
delamanid
fbiC 1303539 c.609G>C synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1303545 c.615A>G synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fbiC 1303575 c.645G>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303590 c.660A>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1303602 c.672A>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1303605 c.675C>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1303608 c.678G>A synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1303614 c.684C>T synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1303617 c.687C>G synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1303632 c.702T>G synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1303641 c.711C>T synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1303650 c.720G>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303654 c.724C>T synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303659 c.729T>C synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1303661 p.Val244Ala missense_variant 0.23 clofazimine
pretomanid
delamanid
fbiC 1303663 c.733C>T synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1303671 c.741C>T synonymous_variant 0.24 clofazimine Not assoc w R - Interim
pretomanid
delamanid
fbiC 1303674 c.744C>G synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303681 c.751T>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303686 c.756C>G synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303695 c.765T>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1303704 c.774T>C synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1303708 c.778T>C synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1303728 c.798G>A synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303731 c.801A>T synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fbiC 1303732 p.Ser268Ala missense_variant 0.23 clofazimine
pretomanid
delamanid
fbiC 1303737 c.807G>A synonymous_variant 0.23 clofazimine
pretomanid
delamanid
fbiC 1303746 c.816T>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1303749 c.819G>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303752 c.822A>G synonymous_variant 0.24 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1303755 c.825T>C synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1303761 c.831T>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1303785 c.855G>C synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1303797 c.867A>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1303818 c.888C>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1303836 c.906G>C synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1303845 c.915C>G synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1303846 p.Phe306Val missense_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1303854 c.924T>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1303860 c.930A>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1303884 c.954T>G synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1303905 c.975G>C synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1303914 c.984C>G synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1303920 c.990C>T synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1303944 c.1014G>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1303947 c.1017T>G synonymous_variant 0.3 clofazimine
pretomanid
delamanid
fbiC 1303948 p.Gly340Arg missense_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1303953 p.Asp341Glu missense_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1303956 c.1026A>G synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1303961 p.Arg344Leu missense_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1303971 c.1041T>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1303980 c.1050G>A synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1303998 c.1068T>G synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1304004 c.1074A>G synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304008 c.1078T>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304022 c.1092T>C synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1304031 c.1101C>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1304034 c.1104A>G synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1304040 c.1110C>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1304046 c.1116C>G synonymous_variant 0.3 clofazimine
pretomanid
delamanid
fbiC 1304049 c.1119T>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304050 c.1120T>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304058 c.1128G>A synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304059 c.1129C>T synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304064 c.1134G>C synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1304067 c.1137G>C synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1304085 c.1155C>T synonymous_variant 0.24 clofazimine
pretomanid
delamanid
fbiC 1304091 p.Asp387Glu missense_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304092 p.Met388Leu missense_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304097 c.1167G>C synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304106 c.1176G>C synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304127 c.1197A>G synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304613 c.1683T>C synonymous_variant 0.2 clofazimine
pretomanid
delamanid
fbiC 1304634 c.1704C>G synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304640 c.1710A>C synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304646 c.1716T>C synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304658 c.1728C>G synonymous_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304661 c.1731C>T synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304670 c.1740G>C synonymous_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304671 p.Val581Thr missense_variant 0.22 clofazimine
pretomanid
delamanid
fbiC 1304675 p.Gly582Asp missense_variant 0.21 clofazimine
pretomanid
delamanid
fbiC 1304691 c.1761G>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1304694 c.1764A>C synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1304703 c.1773C>G synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1304711 p.Ala594Glu missense_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1304715 c.1785G>C synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1304724 c.1794A>G synonymous_variant 0.27 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1304727 c.1797A>G synonymous_variant 0.28 clofazimine
pretomanid
delamanid
fbiC 1304742 c.1812T>C synonymous_variant 0.3 clofazimine
pretomanid
delamanid
fbiC 1304757 c.1827A>G synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1304778 c.1848T>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304784 c.1854T>C synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1304787 c.1857T>G synonymous_variant 0.35 clofazimine
pretomanid
delamanid
fbiC 1304808 c.1878C>G synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1304811 c.1881C>G synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1304817 c.1887T>C synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1304826 c.1896G>A synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304829 c.1899T>C synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1304832 c.1902C>T synonymous_variant 0.32 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1304856 c.1926C>G synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1304869 c.1939C>T synonymous_variant 0.27 clofazimine
pretomanid
delamanid
fbiC 1304875 p.Ile649Val missense_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304883 p.Glu651Asp missense_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304891 p.Ile654Thr missense_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304893 p.Gly655Ser missense_variant 0.3 clofazimine
pretomanid
delamanid
fbiC 1304907 c.1977C>G synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304910 c.1980G>C synonymous_variant 0.29 clofazimine
pretomanid
delamanid
fbiC 1304916 c.1986T>C synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1304928 c.1998T>C synonymous_variant 0.35 clofazimine
pretomanid
delamanid
fbiC 1304937 c.2007G>C synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1304958 c.2028T>G synonymous_variant 0.34 clofazimine
pretomanid
delamanid
fbiC 1304983 c.2053C>T synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1304994 c.2064A>G synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1304995 p.Leu689Met missense_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1305006 c.2076A>G synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1305012 c.2082G>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1305015 c.2085G>C synonymous_variant 0.32 clofazimine
pretomanid
delamanid
fbiC 1305021 c.2091C>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1305030 c.2100G>C synonymous_variant 0.26 clofazimine
pretomanid
delamanid
fbiC 1305033 c.2103T>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1305042 c.2112A>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
fbiC 1305045 c.2115A>G synonymous_variant 0.25 clofazimine
pretomanid
delamanid
Rv1258c 1407489 c.-149G>A upstream_gene_variant 1.0 streptomycin
isoniazid
pyrazinamide
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472028 n.183A>T non_coding_transcript_exon_variant 0.2 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472029 n.184C>T non_coding_transcript_exon_variant 0.19 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.19 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472031 n.186G>A non_coding_transcript_exon_variant 0.2 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472044 n.199G>T non_coding_transcript_exon_variant 0.2 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472045 n.200T>A non_coding_transcript_exon_variant 0.2 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.23 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.26 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.27 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.29 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.29 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.29 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.29 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.29 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473123 n.1278delAinsTT non_coding_transcript_exon_variant 0.28 streptomycin
kanamycin
capreomycin
amikacin
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.32 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.3 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.24 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.3 capreomycin
linezolid
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.29 capreomycin
linezolid
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 0.29 capreomycin
linezolid
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.33 capreomycin
linezolid
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.32 capreomycin Not assoc w R
linezolid Not assoc w R
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.31 capreomycin
linezolid
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.3 capreomycin
linezolid
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.33 capreomycin
linezolid
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.31 capreomycin
linezolid
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.31 capreomycin
linezolid
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.23 capreomycin
linezolid
rrl 1474427 n.770A>C non_coding_transcript_exon_variant 0.2 capreomycin
linezolid
rrl 1474429 n.772G>C non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.36 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.33 capreomycin
linezolid
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.37 capreomycin
linezolid
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.36 capreomycin Uncertain significance
linezolid
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.36 capreomycin
linezolid
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.36 capreomycin
linezolid
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.39 capreomycin
linezolid
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.39 capreomycin
linezolid
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.34 capreomycin
linezolid
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.37 capreomycin
linezolid
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.34 capreomycin
linezolid
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.37 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.39 capreomycin
linezolid
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.39 capreomycin Uncertain significance
linezolid
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.41 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.4 capreomycin Uncertain significance
linezolid
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.28 capreomycin
linezolid Uncertain significance
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.25 capreomycin
linezolid
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.26 capreomycin
linezolid
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.26 capreomycin
linezolid
rrl 1475761 n.2104_2106delCGCinsGT non_coding_transcript_exon_variant 0.25 capreomycin
linezolid
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.25 capreomycin
linezolid
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.32 capreomycin
linezolid
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.32 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476031 n.2374C>T non_coding_transcript_exon_variant 0.29 capreomycin
linezolid
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.29 capreomycin
linezolid
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.27 capreomycin
linezolid
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.27 capreomycin
linezolid
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.29 capreomycin
linezolid
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.3 capreomycin
linezolid
rrl 1476105 n.2448_2449delGAinsT non_coding_transcript_exon_variant 0.26 capreomycin
linezolid
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.3 capreomycin
linezolid
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.24 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.25 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.22 capreomycin
linezolid
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid
fabG1 1673615 p.Glu59Val missense_variant 0.18 ethionamide
isoniazid
fabG1 1673633 p.Ser65Asn missense_variant 0.19 ethionamide
isoniazid
fabG1 1673641 p.Val68Ile missense_variant 0.21 ethionamide
isoniazid
inhA 1673646 c.-556T>C upstream_gene_variant 0.2 ethionamide
isoniazid
fabG1 1673657 p.Thr73Lys missense_variant 0.2 ethionamide
isoniazid
fabG1 1673660 p.Ala74Glu missense_variant 0.19 ethionamide
isoniazid
inhA 1673664 c.-538A>C upstream_gene_variant 0.2 ethionamide
isoniazid
inhA 1673679 c.-523T>C upstream_gene_variant 0.24 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1673685 c.-517C>T upstream_gene_variant 0.24 ethionamide
isoniazid
fabG1 1673710 p.Leu91Ile missense_variant 0.29 ethionamide
isoniazid
fabG1 1673716 p.Ala93Lys missense_variant 0.26 ethionamide
isoniazid
fabG1 1673733 p.Met98Ile missense_variant 0.28 ethionamide
isoniazid
inhA 1673748 c.-454A>G upstream_gene_variant 0.26 ethionamide
isoniazid
fabG1 1673749 p.Lys104Arg missense_variant 0.25 ethionamide
isoniazid
fabG1 1673758 p.Lys107Glu missense_variant 0.28 ethionamide
isoniazid
inhA 1673784 c.-418G>C upstream_gene_variant 0.28 ethionamide
isoniazid
fabG1 1673797 c.358_360delGCTinsAC frameshift_variant&missense_variant 0.25 ethionamide
isoniazid
inhA 1673802 c.-400A>G upstream_gene_variant 0.24 ethionamide
isoniazid
inhA 1673805 c.-397G>C upstream_gene_variant 0.24 ethionamide
isoniazid
inhA 1673808 c.-394A>C upstream_gene_variant 0.24 ethionamide
isoniazid
fabG1 1673809 p.Ser124Ala missense_variant 0.24 ethionamide
isoniazid
fabG1 1673823 c.385_388delCGCA frameshift_variant 0.24 ethionamide
isoniazid
fabG1 1673829 p.Asn130Lys missense_variant 0.23 ethionamide
isoniazid
fabG1 1673832 c.393_394insGCGG frameshift_variant 0.24 ethionamide
isoniazid
inhA 1673841 c.-361A>C upstream_gene_variant 0.23 ethionamide
isoniazid
fabG1 1673844 p.Met135Ile missense_variant 0.23 ethionamide
isoniazid
inhA 1673847 c.-355A>C upstream_gene_variant 0.23 ethionamide
isoniazid
fabG1 1673849 p.Phe137Tyr missense_variant 0.22 ethionamide
isoniazid
inhA 1673853 c.-349A>C upstream_gene_variant 0.22 ethionamide
isoniazid
inhA 1673856 c.-346T>C upstream_gene_variant 0.23 ethionamide
isoniazid
inhA 1673862 c.-340C>G upstream_gene_variant 0.23 ethionamide
isoniazid
fabG1 1673890 p.Ala151Ser missense_variant 0.25 ethionamide
isoniazid
inhA 1673901 c.-301A>G upstream_gene_variant 0.25 ethionamide
isoniazid
fabG1 1673905 p.Ser156Ala missense_variant 0.27 ethionamide
isoniazid
inhA 1673916 c.-286A>C upstream_gene_variant 0.26 ethionamide
isoniazid
fabG1 1673917 p.Val160Leu missense_variant 0.26 ethionamide
isoniazid
inhA 1673922 c.-280T>C upstream_gene_variant 0.27 ethionamide
isoniazid
fabG1 1673941 p.Ala168Ser missense_variant 0.29 ethionamide
isoniazid
inhA 1673955 c.-247G>C upstream_gene_variant 0.25 ethionamide
isoniazid
inhA 1673961 c.-241A>C upstream_gene_variant 0.24 ethionamide
isoniazid
inhA 1673985 c.-217C>G upstream_gene_variant 0.22 ethionamide
isoniazid
inhA 1674015 c.-187C>T upstream_gene_variant 0.2 ethionamide
isoniazid Uncertain significance
inhA 1674024 c.-178T>C upstream_gene_variant 0.2 ethionamide
isoniazid
inhA 1674033 c.-169T>C upstream_gene_variant 0.2 ethionamide
isoniazid
fabG1 1674037 p.Gln200Ala missense_variant 0.2 ethionamide
isoniazid
inhA 1674042 c.-160G>T upstream_gene_variant 0.21 ethionamide
isoniazid
fabG1 1674049 c.610_612delCAAinsGC frameshift_variant&missense_variant 0.21 ethionamide
isoniazid
inhA 1674054 c.-148T>C upstream_gene_variant 0.21 ethionamide
isoniazid
inhA 1674060 c.-142A>G upstream_gene_variant 0.22 ethionamide
isoniazid
inhA 1674063 c.-139G>C upstream_gene_variant 0.22 ethionamide
isoniazid
fabG1 1674079 p.Pro214Ala missense_variant 0.22 ethionamide
isoniazid
inhA 1674114 c.-88T>A upstream_gene_variant 0.22 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674504 c.303C>G synonymous_variant 0.21 ethionamide
isoniazid
inhA 1674507 c.306G>C synonymous_variant 0.22 ethionamide
isoniazid
inhA 1674537 c.336C>G synonymous_variant 0.2 ethionamide
isoniazid
inhA 1674542 p.Ala114Glu missense_variant 0.23 ethionamide
isoniazid
inhA 1674546 c.345T>C synonymous_variant 0.21 ethionamide
isoniazid
inhA 1674549 c.348G>C synonymous_variant 0.22 ethionamide
isoniazid
inhA 1674555 c.354G>A synonymous_variant 0.23 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674561 c.360C>T synonymous_variant 0.24 ethionamide
isoniazid
inhA 1674582 c.381T>C synonymous_variant 0.21 ethionamide
isoniazid
inhA 1674585 c.384T>C synonymous_variant 0.21 ethionamide
isoniazid
inhA 1674589 p.Met130Leu missense_variant 0.21 ethionamide
isoniazid
inhA 1674601 p.Leu134Thr missense_variant 0.19 ethionamide
isoniazid
inhA 1674624 c.423A>C synonymous_variant 0.24 ethionamide
isoniazid
inhA 1674630 c.429C>G synonymous_variant 0.24 ethionamide
isoniazid
inhA 1674660 c.459G>C synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674672 c.471C>G synonymous_variant 0.32 ethionamide
isoniazid
inhA 1674703 c.502T>C synonymous_variant 0.36 ethionamide
isoniazid
inhA 1674708 c.507G>A synonymous_variant 0.37 ethionamide
isoniazid
inhA 1674718 c.517A>C synonymous_variant 0.34 ethionamide
isoniazid
inhA 1674738 c.537C>G synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674741 c.540C>T synonymous_variant 0.3 ethionamide
isoniazid Not assoc w R - Interim
inhA 1674746 p.Tyr182Phe missense_variant 0.29 ethionamide
isoniazid
inhA 1674750 c.549T>C synonymous_variant 0.3 ethionamide
isoniazid
inhA 1674753 c.552G>C synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674756 c.555T>C synonymous_variant 0.31 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674759 c.558G>C synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674774 c.573A>G synonymous_variant 0.32 ethionamide
isoniazid
inhA 1674780 c.579T>G synonymous_variant 0.32 ethionamide
isoniazid
inhA 1674789 c.588G>C synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674801 c.600T>C synonymous_variant 0.31 ethionamide
isoniazid
inhA 1674816 c.615T>C synonymous_variant 0.31 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674822 c.621C>G synonymous_variant 0.33 ethionamide
isoniazid
inhA 1674828 p.Glu209Asp missense_variant 0.33 ethionamide
isoniazid
inhA 1674846 p.Ile215Met missense_variant 0.29 ethionamide
isoniazid
inhA 1674864 c.663C>T synonymous_variant 0.31 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674870 c.669T>C synonymous_variant 0.33 ethionamide
isoniazid
inhA 1674879 c.678T>C synonymous_variant 0.3 ethionamide
isoniazid
inhA 1674888 c.687C>G synonymous_variant 0.3 ethionamide
isoniazid
inhA 1674903 c.702T>C synonymous_variant 0.28 ethionamide
isoniazid
inhA 1674904 p.Ala235Pro missense_variant 0.29 ethionamide
isoniazid
inhA 1674942 c.741T>G synonymous_variant 0.27 ethionamide
isoniazid
inhA 1674954 c.753G>C synonymous_variant 0.29 ethionamide
isoniazid
inhA 1674960 c.759C>G synonymous_variant 0.24 ethionamide
isoniazid
inhA 1674966 c.765T>G synonymous_variant 0.21 ethionamide
isoniazid
inhA 1674967 p.Asp256Thr missense_variant 0.2 ethionamide
isoniazid
rpsA 1833589 c.48A>T synonymous_variant 0.2 pyrazinamide
rpsA 1833595 c.54T>C synonymous_variant 0.21 pyrazinamide
rpsA 1833661 c.120A>G synonymous_variant 0.32 pyrazinamide
rpsA 1833667 c.126C>G synonymous_variant 0.31 pyrazinamide
rpsA 1833721 c.180A>G synonymous_variant 0.37 pyrazinamide
rpsA 1833724 c.183C>G synonymous_variant 0.37 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 0.37 pyrazinamide
rpsA 1833742 c.201A>G synonymous_variant 0.39 pyrazinamide
rpsA 1833745 c.204G>C synonymous_variant 0.4 pyrazinamide
rpsA 1833748 c.207C>G synonymous_variant 0.41 pyrazinamide
rpsA 1833787 c.246C>G synonymous_variant 0.44 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 0.43 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 0.43 pyrazinamide
rpsA 1833811 c.270G>T synonymous_variant 0.43 pyrazinamide
rpsA 1833838 c.297G>C synonymous_variant 0.41 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 0.4 pyrazinamide
rpsA 1833847 c.306C>G synonymous_variant 0.44 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 0.44 pyrazinamide
rpsA 1833874 c.333T>C synonymous_variant 0.44 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 0.49 pyrazinamide
rpsA 1833940 c.399C>G synonymous_variant 0.46 pyrazinamide
rpsA 1833971 c.430C>T synonymous_variant 0.41 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 0.41 pyrazinamide
rpsA 1834000 c.459G>C synonymous_variant 0.39 pyrazinamide
rpsA 1834021 c.480C>T synonymous_variant 0.38 pyrazinamide
rpsA 1834030 c.489C>G synonymous_variant 0.41 pyrazinamide
rpsA 1834099 c.558C>G synonymous_variant 0.34 pyrazinamide
rpsA 1834102 c.561T>C synonymous_variant 0.35 pyrazinamide
rpsA 1834105 c.564C>G synonymous_variant 0.35 pyrazinamide
rpsA 1834108 c.567C>G synonymous_variant 0.36 pyrazinamide
rpsA 1834123 c.582C>G synonymous_variant 0.32 pyrazinamide
rpsA 1834150 c.609G>C synonymous_variant 0.26 pyrazinamide
rpsA 1834153 c.612T>C synonymous_variant 0.26 pyrazinamide
rpsA 1834154 c.613_615delAACinsCG frameshift_variant&missense_variant 0.26 pyrazinamide Uncertain significance
rpsA 1834157 c.616T>C synonymous_variant 0.26 pyrazinamide
rpsA 1834162 c.621A>G synonymous_variant 0.26 pyrazinamide Not assoc w R - Interim
rpsA 1834165 c.624A>G synonymous_variant 0.26 pyrazinamide
rpsA 1834169 p.Thr210Ala missense_variant 0.27 pyrazinamide Uncertain significance
rpsA 1834177 c.636A>C synonymous_variant 0.27 pyrazinamide Not assoc w R - Interim
rpsA 1834189 c.648G>C synonymous_variant 0.28 pyrazinamide
rpsA 1834195 c.654G>C synonymous_variant 0.29 pyrazinamide
rpsA 1834210 c.669C>T synonymous_variant 0.32 pyrazinamide
rpsA 1834222 c.681T>C synonymous_variant 0.31 pyrazinamide
rpsA 1834231 c.690T>C synonymous_variant 0.31 pyrazinamide
rpsA 1834234 c.693G>C synonymous_variant 0.32 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 0.32 pyrazinamide
rpsA 1834261 c.720A>G synonymous_variant 0.29 pyrazinamide Not assoc w R - Interim
rpsA 1834262 c.721_723delTCGinsAGC synonymous_variant 0.29 pyrazinamide
rpsA 1834303 c.762T>C synonymous_variant 0.35 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.36 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.4 pyrazinamide Not assoc w R - Interim
rpsA 1834366 c.825A>G synonymous_variant 0.39 pyrazinamide Not assoc w R - Interim
rpsA 1834396 c.855G>C synonymous_variant 0.42 pyrazinamide
rpsA 1834411 c.870T>C synonymous_variant 0.41 pyrazinamide
rpsA 1834417 c.876G>C synonymous_variant 0.4 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.42 pyrazinamide
rpsA 1834435 c.894G>C synonymous_variant 0.4 pyrazinamide
rpsA 1834451 c.910T>C synonymous_variant 0.4 pyrazinamide
rpsA 1834465 c.924T>C synonymous_variant 0.4 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 0.39 pyrazinamide
rpsA 1834489 c.948T>C synonymous_variant 0.4 pyrazinamide
rpsA 1834513 c.972C>G synonymous_variant 0.44 pyrazinamide
rpsA 1834528 c.987T>C synonymous_variant 0.42 pyrazinamide
rpsA 1834540 c.999G>C synonymous_variant 0.41 pyrazinamide
rpsA 1834546 c.1005T>C synonymous_variant 0.4 pyrazinamide
rpsA 1834555 c.1014T>G synonymous_variant 0.43 pyrazinamide
rpsA 1834606 c.1065C>G synonymous_variant 0.45 pyrazinamide
rpsA 1834609 c.1068T>C synonymous_variant 0.45 pyrazinamide
rpsA 1834633 c.1092A>G synonymous_variant 0.45 pyrazinamide
rpsA 1834639 c.1098T>C synonymous_variant 0.45 pyrazinamide
rpsA 1834654 p.Glu371Asp missense_variant 0.41 pyrazinamide
rpsA 1834690 c.1149T>C synonymous_variant 0.43 pyrazinamide
rpsA 1834732 c.1191T>C synonymous_variant 0.4 pyrazinamide
rpsA 1834733 p.Ala398Ser missense_variant 0.4 pyrazinamide
rpsA 1834738 c.1197A>G synonymous_variant 0.39 pyrazinamide
rpsA 1834753 c.1212T>C synonymous_variant 0.36 pyrazinamide
rpsA 1834765 p.Glu408Asp missense_variant 0.36 pyrazinamide
rpsA 1834775 p.Ala412Thr missense_variant 0.33 pyrazinamide
rpsA 1834780 c.1239A>G synonymous_variant 0.3 pyrazinamide
rpsA 1834786 c.1245A>G synonymous_variant 0.27 pyrazinamide
rpsA 1834789 c.1248T>C synonymous_variant 0.24 pyrazinamide
rpsA 1834792 c.1251G>C synonymous_variant 0.24 pyrazinamide
tsnR 1853361 c.-245T>C upstream_gene_variant 0.25 linezolid
tsnR 1853370 c.-236_-234delGCAinsTG upstream_gene_variant 0.25 linezolid
tsnR 1853387 c.-219T>G upstream_gene_variant 0.25 linezolid
tsnR 1853394 c.-212_-211delCTinsGC upstream_gene_variant 0.26 linezolid
tsnR 1853408 c.-198C>G upstream_gene_variant 0.25 linezolid
tsnR 1853420 c.-186T>G upstream_gene_variant 0.24 linezolid
tsnR 1853429 c.-177G>C upstream_gene_variant 0.23 linezolid
tsnR 1853432 c.-174G>C upstream_gene_variant 0.19 linezolid
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
tlyA 1917972 c.33A>G synonymous_variant 1.0 capreomycin Not assoc w R
bacA 2064936 c.-208C>G upstream_gene_variant 0.2 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064942 c.-214G>A upstream_gene_variant 0.22 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064948 c.-220G>C upstream_gene_variant 0.23 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064972 c.-244T>C upstream_gene_variant 0.23 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064978 c.-250G>C upstream_gene_variant 0.21 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064979 c.-251C>T upstream_gene_variant 0.21 streptomycin
kanamycin
capreomycin
amikacin
bacA 2064984 c.-256A>G upstream_gene_variant 0.2 streptomycin
kanamycin
capreomycin
amikacin
ndh 2101830 p.Ile405Val missense_variant 0.21 ethionamide
delamanid
isoniazid
ndh 2101837 p.Ala402Val missense_variant 0.21 ethionamide Uncertain significance
delamanid
isoniazid Uncertain significance
ndh 2101872 p.Ile391Phe missense_variant 0.21 ethionamide
delamanid
isoniazid
ndh 2101873 p.Phe390Leu missense_variant 0.21 ethionamide
delamanid
isoniazid
ndh 2101885 c.1158G>A synonymous_variant 0.21 ethionamide
delamanid
isoniazid
ndh 2101912 c.1131G>C synonymous_variant 0.21 ethionamide
delamanid
isoniazid
ndh 2101920 c.1123A>C synonymous_variant 0.2 ethionamide
delamanid
isoniazid
ndh 2101924 c.1119T>G synonymous_variant 0.2 ethionamide
delamanid
isoniazid
ndh 2101939 c.1104A>G synonymous_variant 0.2 ethionamide
delamanid
isoniazid
ndh 2101988 p.Ala352Asp missense_variant 0.18 ethionamide
delamanid
isoniazid
katG 2156709 c.-598C>T upstream_gene_variant 1.0 isoniazid
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 clofazimine Not assoc w R
bedaquiline Not assoc w R - Interim
kasA 2517950 c.-165C>G upstream_gene_variant 0.32 isoniazid
kasA 2517989 c.-126T>C upstream_gene_variant 0.33 isoniazid
kasA 2517993 c.-122G>T upstream_gene_variant 0.32 isoniazid
kasA 2518019 c.-96A>G upstream_gene_variant 0.28 isoniazid
kasA 2518025 c.-90G>C upstream_gene_variant 0.26 isoniazid
kasA 2518031 c.-84G>T upstream_gene_variant 0.26 isoniazid
kasA 2518034 c.-81T>C upstream_gene_variant 0.25 isoniazid
kasA 2518035 c.-80C>G upstream_gene_variant 0.24 isoniazid
kasA 2518041 c.-74T>C upstream_gene_variant 0.24 isoniazid
kasA 2518049 c.-66G>C upstream_gene_variant 0.25 isoniazid
kasA 2518053 c.-62_-60delATTinsCG upstream_gene_variant 0.24 isoniazid
kasA 2518059 c.-56_-54delTCGinsAC upstream_gene_variant 0.23 isoniazid
kasA 2518073 c.-42T>C upstream_gene_variant 0.23 isoniazid
kasA 2518076 c.-39C>T upstream_gene_variant 0.99 isoniazid
kasA 2518079 c.-36T>C upstream_gene_variant 0.24 isoniazid
kasA 2518088 c.-27T>C upstream_gene_variant 0.23 isoniazid
kasA 2518089 c.-26C>A upstream_gene_variant 0.23 isoniazid
kasA 2518094 c.-21G>A upstream_gene_variant 0.24 isoniazid
kasA 2518100 c.-15T>G upstream_gene_variant 0.24 isoniazid
kasA 2518103 c.-12G>A upstream_gene_variant 0.24 isoniazid
kasA 2518106 c.-9C>G upstream_gene_variant 0.24 isoniazid
kasA 2518109 c.-6G>C upstream_gene_variant 0.23 isoniazid
kasA 2518110 c.-5T>A upstream_gene_variant 0.23 isoniazid
kasA 2518121 p.Gln3Lys missense_variant 0.24 isoniazid
kasA 2518132 c.18C>T synonymous_variant 0.23 isoniazid
kasA 2518138 c.24T>C synonymous_variant 0.23 isoniazid
kasA 2518146 p.Phe11Tyr missense_variant 0.21 isoniazid
kasA 2518162 c.48G>A synonymous_variant 0.2 isoniazid
kasA 2518504 c.390T>C synonymous_variant 0.2 isoniazid
kasA 2518506 p.Ala131Glu missense_variant 0.2 isoniazid
kasA 2518519 c.405G>C synonymous_variant 0.21 isoniazid
kasA 2518528 c.414C>G synonymous_variant 0.21 isoniazid
kasA 2518540 c.426T>C synonymous_variant 0.24 isoniazid
kasA 2518561 c.447T>C synonymous_variant 0.24 isoniazid
kasA 2518567 c.453G>C synonymous_variant 0.24 isoniazid
kasA 2518570 c.456G>C synonymous_variant 0.23 isoniazid
kasA 2518574 c.460_462delATCinsGG frameshift_variant&missense_variant 0.25 isoniazid
kasA 2518579 c.465T>C synonymous_variant 0.26 isoniazid
kasA 2518588 c.474T>C synonymous_variant 0.27 isoniazid
kasA 2518591 c.477G>C synonymous_variant 0.27 isoniazid
kasA 2518603 c.489G>C synonymous_variant 0.28 isoniazid
kasA 2518609 p.Met165Ile missense_variant 0.3 isoniazid
kasA 2518624 c.510C>G synonymous_variant 0.29 isoniazid
kasA 2518639 c.525G>C synonymous_variant 0.3 isoniazid
kasA 2518657 c.543G>C synonymous_variant 0.27 isoniazid
kasA 2518672 c.558G>C synonymous_variant 0.26 isoniazid
kasA 2518678 c.564C>T synonymous_variant 0.27 isoniazid
kasA 2518684 c.570C>G synonymous_variant 0.26 isoniazid
kasA 2518696 c.582C>G synonymous_variant 0.24 isoniazid
kasA 2518702 c.588C>T synonymous_variant 0.24 isoniazid
kasA 2518705 c.591T>C synonymous_variant 0.25 isoniazid
kasA 2518711 c.597A>G synonymous_variant 0.26 isoniazid
kasA 2518714 c.600A>C synonymous_variant 0.27 isoniazid
kasA 2518732 c.618C>G synonymous_variant 0.3 isoniazid
kasA 2518738 c.624G>C synonymous_variant 0.31 isoniazid
kasA 2518744 c.630C>T synonymous_variant 0.28 isoniazid
kasA 2518747 c.633C>G synonymous_variant 0.26 isoniazid
kasA 2518768 c.654C>T synonymous_variant 0.28 isoniazid
kasA 2518777 c.663C>T synonymous_variant 0.28 isoniazid
kasA 2518783 c.669T>C synonymous_variant 0.28 isoniazid
kasA 2518789 c.675G>C synonymous_variant 0.28 isoniazid
kasA 2518792 c.678C>A synonymous_variant 0.27 isoniazid
kasA 2518795 c.681C>G synonymous_variant 0.29 isoniazid
kasA 2518825 c.711T>C synonymous_variant 0.34 isoniazid
kasA 2518864 c.750G>C synonymous_variant 0.33 isoniazid
kasA 2518879 c.765A>G synonymous_variant 0.33 isoniazid
kasA 2518885 c.771T>C synonymous_variant 0.32 isoniazid
kasA 2518898 c.784T>C synonymous_variant 0.31 isoniazid
kasA 2518906 c.792A>G synonymous_variant 0.32 isoniazid
kasA 2518910 p.Leu266Met missense_variant 0.32 isoniazid
kasA 2518921 c.807T>C synonymous_variant 0.32 isoniazid
kasA 2518927 c.813C>G synonymous_variant 0.34 isoniazid
kasA 2518936 c.822C>G synonymous_variant 0.31 isoniazid
kasA 2518939 c.825T>C synonymous_variant 0.31 isoniazid
kasA 2518942 c.828T>C synonymous_variant 0.31 isoniazid
kasA 2518951 c.837G>C synonymous_variant 0.34 isoniazid
kasA 2518954 c.840C>G synonymous_variant 0.33 isoniazid
kasA 2518963 c.849T>C synonymous_variant 0.33 isoniazid
kasA 2518969 c.855T>G synonymous_variant 0.35 isoniazid
kasA 2518975 c.861C>G synonymous_variant 0.35 isoniazid
kasA 2518979 c.865A>C synonymous_variant 0.35 isoniazid
kasA 2518990 c.876T>G synonymous_variant 0.35 isoniazid
kasA 2518993 c.879C>G synonymous_variant 0.35 isoniazid
kasA 2518999 c.885G>A synonymous_variant 0.34 isoniazid
kasA 2519008 c.894C>G synonymous_variant 0.34 isoniazid
kasA 2519017 c.903G>C synonymous_variant 0.32 isoniazid
kasA 2519020 c.906G>C synonymous_variant 0.32 isoniazid
kasA 2519021 p.Ala303Lys missense_variant 0.32 isoniazid
kasA 2519027 c.913_915delATCinsGT frameshift_variant&missense_variant 0.33 isoniazid
kasA 2519050 c.936C>G synonymous_variant 0.31 isoniazid
kasA 2519053 c.939G>C synonymous_variant 0.32 isoniazid
kasA 2519062 c.948T>G synonymous_variant 0.31 isoniazid
kasA 2519068 c.954C>T synonymous_variant 0.32 isoniazid
kasA 2519072 p.Ala320Thr missense_variant 0.32 isoniazid
kasA 2519107 c.993T>C synonymous_variant 0.27 isoniazid
kasA 2519108 c.994_996delGATinsCG frameshift_variant&missense_variant 0.27 isoniazid
kasA 2519116 c.1002C>G synonymous_variant 0.28 isoniazid
kasA 2519122 c.1008G>C synonymous_variant 0.28 isoniazid
kasA 2519137 c.1023T>G synonymous_variant 0.28 isoniazid
kasA 2519158 c.1044C>T synonymous_variant 0.24 isoniazid
kasA 2519167 c.1053T>G synonymous_variant 0.22 isoniazid
kasA 2519173 c.1059C>G synonymous_variant 0.23 isoniazid
Rv2477c 2782822 c.1221G>C synonymous_variant 0.19 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782828 c.1215T>C synonymous_variant 0.22 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin
kanamycin
rifampicin Not assoc w R - Interim
amikacin
Rv2477c 2782841 p.Thr401Asn missense_variant 0.23 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782847 p.Arg399Lys missense_variant 0.22 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782852 c.1191T>C synonymous_variant 0.23 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782861 c.1182T>G synonymous_variant 0.24 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782864 c.1179T>C synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782869 p.Ala392Thr missense_variant 0.27 ethambutol Uncertain significance
moxifloxacin Uncertain significance
streptomycin
levofloxacin Uncertain significance
kanamycin Uncertain significance
rifampicin Uncertain significance
amikacin Uncertain significance
Rv2477c 2782876 c.1167G>C synonymous_variant 0.3 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782882 c.1161T>C synonymous_variant 0.3 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782912 p.Ser377Thr missense_variant 0.31 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782927 p.Thr372Glu missense_variant 0.3 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782936 c.1107G>T synonymous_variant 0.32 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782948 c.1095A>G synonymous_variant 0.38 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782957 c.1086A>G synonymous_variant 0.36 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2782966 c.1077C>A synonymous_variant 0.35 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782969 c.1074A>C synonymous_variant 0.34 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782972 c.1071G>C synonymous_variant 0.34 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782981 c.1062G>C synonymous_variant 0.37 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782984 c.1059T>C synonymous_variant 0.37 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2782990 c.1053C>G synonymous_variant 0.36 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783002 c.1041T>C synonymous_variant 0.37 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783008 c.1035C>G synonymous_variant 0.38 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783013 c.1030T>C synonymous_variant 0.39 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783015 p.Ser343Thr missense_variant 0.39 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783035 c.1008G>C synonymous_variant 0.39 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783040 p.Ala335Thr missense_variant 0.41 ethambutol Uncertain significance
moxifloxacin Uncertain significance
streptomycin Uncertain significance
levofloxacin Uncertain significance
kanamycin Uncertain significance
rifampicin Uncertain significance
amikacin Uncertain significance
Rv2477c 2783044 c.999G>C synonymous_variant 0.41 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783048 p.Asp332Gly missense_variant 0.38 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783059 c.984T>C synonymous_variant 0.35 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783068 p.Asp325Glu missense_variant 0.36 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783077 c.966T>C synonymous_variant 0.36 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783092 c.951A>G synonymous_variant 0.32 ethambutol Not assoc w R - Interim
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin Not assoc w R - Interim
amikacin
Rv2477c 2783095 c.948C>G synonymous_variant 0.3 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R
amikacin Not assoc w R - Interim
Rv2477c 2783098 c.945C>G synonymous_variant 0.32 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783101 c.942G>T synonymous_variant 0.33 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783116 c.927T>C synonymous_variant 0.33 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783140 c.903C>G synonymous_variant 0.34 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783146 c.897G>A synonymous_variant 0.35 ethambutol
moxifloxacin Not assoc w R - Interim
streptomycin
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin
amikacin Not assoc w R - Interim
Rv2477c 2783149 c.894G>C synonymous_variant 0.36 ethambutol
moxifloxacin Not assoc w R - Interim
streptomycin
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783158 c.885A>C synonymous_variant 0.35 ethambutol Not assoc w R - Interim
moxifloxacin
streptomycin
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783182 c.861C>G synonymous_variant 0.36 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783185 c.858G>A synonymous_variant 0.37 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783194 c.849A>G synonymous_variant 0.36 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783209 c.834G>A synonymous_variant 0.33 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783221 c.822G>C synonymous_variant 0.31 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783224 c.819C>G synonymous_variant 0.31 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783230 c.813T>G synonymous_variant 0.29 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
kanamycin
rifampicin Not assoc w R - Interim
amikacin
Rv2477c 2783235 c.808T>C synonymous_variant 0.29 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783254 c.789A>G synonymous_variant 0.24 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783263 c.780G>C synonymous_variant 0.23 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783275 c.768C>G synonymous_variant 0.24 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783278 c.765A>G synonymous_variant 0.24 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783293 c.750G>A synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783299 c.744A>G synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783302 c.741A>G synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783311 c.732T>C synonymous_variant 0.24 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783314 c.729C>G synonymous_variant 0.24 ethambutol Not assoc w R - Interim
moxifloxacin
streptomycin Not assoc w R - Interim
levofloxacin
kanamycin
rifampicin Not assoc w R - Interim
amikacin
Rv2477c 2783317 c.726G>C synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783329 c.714G>A synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783332 c.711T>C synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783335 c.708C>G synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783344 c.699C>G synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783350 c.693T>C synonymous_variant 0.27 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783353 c.690T>C synonymous_variant 0.27 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783359 c.684G>A synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783374 c.669G>C synonymous_variant 0.26 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783395 c.648T>G synonymous_variant 0.23 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783422 c.621T>C synonymous_variant 0.2 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783425 c.616_618delCCCinsGG frameshift_variant&missense_variant 0.21 ethambutol Uncertain significance
moxifloxacin Uncertain significance
streptomycin Uncertain significance
levofloxacin Uncertain significance
kanamycin Uncertain significance
rifampicin Uncertain significance
amikacin Uncertain significance
Rv2477c 2783428 c.615C>T synonymous_variant 0.21 ethambutol
moxifloxacin Not assoc w R - Interim
streptomycin
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783431 c.610_612delAGCinsTCG synonymous_variant 0.2 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783437 c.606G>C synonymous_variant 0.22 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783440 c.603T>C synonymous_variant 0.25 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783461 c.582T>C synonymous_variant 0.27 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783464 c.579A>G synonymous_variant 0.28 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783467 c.576G>C synonymous_variant 0.28 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783473 c.570A>C synonymous_variant 0.28 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783485 c.558G>C synonymous_variant 0.3 ethambutol
moxifloxacin
streptomycin
levofloxacin
kanamycin
rifampicin
amikacin
Rv2477c 2783497 c.544_546delTTGinsCC frameshift_variant&missense_variant 0.27 ethambutol Uncertain significance
moxifloxacin Uncertain significance
streptomycin Uncertain significance
levofloxacin Uncertain significance
kanamycin Uncertain significance
rifampicin Uncertain significance
amikacin Uncertain significance
Rv2477c 2783502 c.541T>C synonymous_variant 0.29 ethambutol Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
kanamycin Not assoc w R - I