Rv1484 - c.-160G>T
Drug resistance types
4 Sensitive
0 RR-TB
16 HR-TB
7 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 6 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 7 |
| lineage4 | 1 |
| La3;lineage4.9 | 6 |
| lineage4.1.3 | 2 |
| lineage4.6.1 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9;lineage6.3 | 5 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.2.1 | 4 |
| 13 | |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage2.2.1.2 | 1 |
| La3;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR26159043 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR28119777 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR25827682 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29051077 | Other | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR18003019 | Other | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR7496509 | Other | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2514692 | Other | None | ERR9787197 | Other | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3283028 | Other | La3;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6789626 | Other | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4811311 | Other | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
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