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SRA data
Rv3793
- c.405T>C
Drug resistance types
10 Sensitive
4 RR-TB
59 HR-TB
38 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
23
lineage2.2.1
14
La3;M.canetti;lineage2.1;lineage4.9
12
8
lineage2.1;lineage4.9
7
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage2.1;lineage4.9;lineage6.3
6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
154
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR034476
Sensitive
lineage2.2.1
None
DRR188475
Sensitive
lineage2.2.1
None
DRR188579
Sensitive
lineage2.2.1
None
DRR188639
Sensitive
lineage2.2.1
None
DRR474023
Sensitive
lineage2.2.1
None
DRR474120
Sensitive
lineage2.2.1
None
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11138635
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 154 entries
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