Rv3245c - c.840G>A


Drug resistance types
48 Sensitive 13 RR-TB 55 HR-TB 28 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 204 Other
lineage Counts
lineage Count
lineage4.9 128
lineage2.2.1 16
La1.7;lineage4.9 8
lineage2.1 6
lineage4.9;lineage7 4
lineage4 9
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage4.1.2.1 12
lineage2.1;lineage4.9 15
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 11
La1.7;M.canetti;lineage4.9 4
M.canetti;lineage4.9 2
lineage3.1 1
La3;lineage4.3.4 1
lineage4.5 2
lineage2.1;lineage4.3.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.4.1 2
lineage5.2 2
lineage3.1.1 1
lineage4.3.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3 2
La1.8.1 1
M.canetti;lineage2.1;lineage4.9 2
La1.7;lineage4.3.4.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage4.9 6
lineage1.2.2.2 2
lineage3 4
lineage4.1;lineage4.9 2
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 3
M.canetti;lineage4.9;lineage9 1
23
La1.6;lineage4 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
La3;lineage4.8 1
lineage4.8 5
La3;lineage2.1;lineage4.9 3
lineage6.3.1 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
lineage4.7 1
lineage4.9;lineage6.3 5
lineage4.1.3 2
lineage4.6.3;lineage4.9 1
lineage1.1.2 2
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.1 2
La3;lineage2 1
lineage4.9;lineage9 1
lineage3;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
lineage4.6.2.2 1
lineage4.3.4.2.1 2
lineage5.1.4 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage6.2.3 1
lineage2.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.1.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.2.1 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.4.1.1 2
lineage1;lineage4.9 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.1.3.2 1
La1.7 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.2 1
La3;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 355
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4188247 HR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1173633 Other lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3283030 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046897 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4811031 Other lineage4.5 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR4811030 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR363498 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1196566 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR3797073 Other La1.8.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363509 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4178226 Sensitive lineage4 None
SRR5341293 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR1196546 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR2517475 Other lineage4 None
ERR363500 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR6046594 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR363479 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR363446 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR4816999 Other None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR400529 Other lineage3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363449 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR2514327 HR-TB lineage4.8 None
SRR3675549 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR3275450 Other lineage4 None
ERR369158 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR926156 Other lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR369163 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
SRR6046863 Sensitive lineage1.1.2 None
SRR1172728 RR-TB La3 None
ERR4814352 Other lineage2.2.1 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR3675229 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR926164 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675457 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675247 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR373947 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2446382 Other lineage4 None
SRR3675260 Sensitive lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR971389 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR3675572 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
SRR7496517 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR9787061 Sensitive lineage6.2.3 None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR363499 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR212033 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675265 Other lineage4 None
ERR3797069 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3275201 Sensitive lineage4.8 nl
SRR1173355 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR3283055 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR926165 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045555 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR12708384 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675547 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR10808730 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR12416840 MDR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR22251329 Other lineage2.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR6044855 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR349266 Other lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
SRR1184372 MDR-TB None
ERR2514692 Other None
SRR1172857 Other None
ERR4407463 HR-TB None
ERR9787197 Other None
ERR4817060 Other None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR363421 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR18910194 HR-TB lineage2.2.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None