Run ID: SRR6046863
Sample name:
Date: 04-04-2023 12:24:34
Number of reads: 817926
Percentage reads mapped: 31.58
Strain: lineage1.1.2
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage1 | Indo-Oceanic | EAI | RD239 | 1.0 |
lineage1.1 | Indo-Oceanic | EAI3;EAI4;EAI5;EAI6 | RD239 | 0.99 |
lineage1.1.2 | Indo-Oceanic | EAI3;EAI5 | RD239 | 0.99 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6112 | p.Met291Ile | missense_variant | 1.0 |
gyrB | 6124 | c.885C>T | synonymous_variant | 1.0 |
gyrA | 6631 | c.-671C>T | upstream_gene_variant | 0.13 |
gyrA | 6643 | c.-659A>G | upstream_gene_variant | 0.16 |
gyrA | 6649 | c.-653T>C | upstream_gene_variant | 0.17 |
gyrA | 6655 | c.-647T>C | upstream_gene_variant | 0.19 |
gyrA | 6670 | c.-632G>C | upstream_gene_variant | 0.12 |
gyrA | 6697 | c.-605C>T | upstream_gene_variant | 0.16 |
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.16 |
gyrA | 6703 | c.-599G>T | upstream_gene_variant | 0.17 |
gyrA | 6706 | c.-596G>A | upstream_gene_variant | 0.17 |
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.18 |
gyrA | 6715 | c.-587C>T | upstream_gene_variant | 0.18 |
gyrA | 6727 | c.-575G>T | upstream_gene_variant | 0.2 |
gyrA | 6728 | c.-574_-572delCTAinsTTG | upstream_gene_variant | 0.2 |
gyrA | 6745 | c.-557T>C | upstream_gene_variant | 0.25 |
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.27 |
gyrA | 6764 | c.-538C>T | upstream_gene_variant | 0.29 |
gyrA | 6772 | c.-530C>G | upstream_gene_variant | 0.23 |
gyrA | 6775 | c.-527G>T | upstream_gene_variant | 0.14 |
gyrA | 6841 | c.-461T>C | upstream_gene_variant | 0.11 |
gyrA | 6889 | c.-413G>T | upstream_gene_variant | 0.12 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7412 | c.111C>G | synonymous_variant | 0.15 |
gyrA | 7421 | c.120G>C | synonymous_variant | 0.17 |
gyrA | 7427 | c.126G>C | synonymous_variant | 0.14 |
gyrA | 7430 | c.129G>A | synonymous_variant | 0.14 |
gyrA | 7457 | c.156T>C | synonymous_variant | 0.15 |
gyrA | 7463 | c.162G>C | synonymous_variant | 0.14 |
gyrA | 7466 | c.165G>C | synonymous_variant | 0.13 |
gyrA | 7469 | c.168C>T | synonymous_variant | 0.13 |
gyrA | 7472 | c.171T>C | synonymous_variant | 0.13 |
gyrA | 7475 | c.174A>G | synonymous_variant | 0.14 |
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.17 |
gyrA | 7484 | c.183T>C | synonymous_variant | 0.17 |
gyrA | 7490 | c.189C>G | synonymous_variant | 0.16 |
gyrA | 7496 | c.195C>G | synonymous_variant | 0.16 |
gyrA | 7499 | c.198G>C | synonymous_variant | 0.16 |
gyrA | 7523 | c.222C>G | synonymous_variant | 0.18 |
gyrA | 7526 | c.225G>C | synonymous_variant | 0.18 |
gyrA | 7532 | c.231T>G | synonymous_variant | 0.18 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 7595 | c.294C>T | synonymous_variant | 0.13 |
gyrA | 7601 | c.300C>G | synonymous_variant | 0.13 |
gyrA | 7619 | c.318C>T | synonymous_variant | 0.15 |
gyrA | 7640 | c.339G>A | synonymous_variant | 0.12 |
gyrA | 7643 | c.342C>A | synonymous_variant | 0.12 |
gyrA | 8452 | p.Ala384Val | missense_variant | 1.0 |
gyrA | 8915 | c.1614A>G | synonymous_variant | 0.12 |
gyrA | 8924 | c.1623C>T | synonymous_variant | 0.12 |
gyrA | 8967 | p.Ala556Lys | missense_variant | 0.14 |
gyrA | 8990 | c.1689C>G | synonymous_variant | 0.12 |
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 490959 | c.177C>G | synonymous_variant | 0.12 |
fgd1 | 490962 | c.180T>C | synonymous_variant | 0.12 |
fgd1 | 490971 | c.189A>G | synonymous_variant | 0.12 |
fgd1 | 490978 | p.Asn66Gln | missense_variant | 0.12 |
fgd1 | 490983 | c.201G>C | synonymous_variant | 0.12 |
fgd1 | 490988 | p.Leu69Gln | missense_variant | 0.13 |
fgd1 | 490992 | c.210G>C | synonymous_variant | 0.17 |
fgd1 | 490998 | c.216T>C | synonymous_variant | 0.17 |
fgd1 | 491022 | c.240C>G | synonymous_variant | 0.16 |
fgd1 | 491034 | c.252C>G | synonymous_variant | 0.13 |
fgd1 | 491039 | p.Ile86Thr | missense_variant | 0.13 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
mshA | 575756 | c.409C>T | synonymous_variant | 0.15 |
mshA | 575779 | c.432A>G | synonymous_variant | 0.17 |
mshA | 575785 | c.438T>C | synonymous_variant | 0.17 |
mshA | 575792 | p.Asp149Asn | missense_variant | 0.17 |
mshA | 575795 | p.Ile150Leu | missense_variant | 0.16 |
mshA | 575800 | c.453G>T | synonymous_variant | 0.18 |
mshA | 575818 | c.471G>T | synonymous_variant | 0.19 |
mshA | 575821 | c.474G>C | synonymous_variant | 0.18 |
mshA | 575829 | p.Val161Ala | missense_variant | 0.16 |
mshA | 575842 | c.495G>C | synonymous_variant | 0.19 |
mshA | 575845 | c.498C>G | synonymous_variant | 0.19 |
mshA | 575851 | c.504C>A | synonymous_variant | 0.17 |
mshA | 576779 | p.Val478Leu | missense_variant | 0.15 |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.12 |
rpoB | 760400 | c.594G>C | synonymous_variant | 0.18 |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.15 |
rpoB | 760407 | p.Ser201Gly | missense_variant | 0.15 |
rpoB | 760412 | c.606C>T | synonymous_variant | 0.15 |
rpoB | 760415 | c.609C>T | synonymous_variant | 0.15 |
rpoB | 760418 | c.612G>A | synonymous_variant | 0.15 |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.16 |
rpoB | 760433 | c.627C>T | synonymous_variant | 0.16 |
rpoB | 760454 | c.648C>G | synonymous_variant | 0.12 |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.15 |
rpoB | 760487 | c.681G>C | synonymous_variant | 0.11 |
rpoB | 760490 | c.684C>T | synonymous_variant | 0.89 |
rpoB | 760502 | c.696C>G | synonymous_variant | 0.12 |
rpoB | 760508 | c.702G>A | synonymous_variant | 0.15 |
rpoB | 760511 | c.705G>C | synonymous_variant | 0.14 |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.16 |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.14 |
rpoB | 760541 | c.735G>T | synonymous_variant | 0.14 |
rpoB | 760561 | c.757_758delCG | frameshift_variant | 0.14 |
rpoB | 760571 | c.765G>C | synonymous_variant | 0.14 |
rpoB | 760588 | p.Thr261Ile | missense_variant | 0.12 |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.13 |
rpoB | 760595 | c.789C>T | synonymous_variant | 0.13 |
rpoB | 760596 | p.Thr264Pro | missense_variant | 0.13 |
rpoB | 760607 | c.801G>C | synonymous_variant | 0.17 |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.19 |
rpoB | 760634 | c.828T>C | synonymous_variant | 0.17 |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.16 |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.15 |
rpoB | 760661 | c.855A>C | synonymous_variant | 0.12 |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.13 |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.12 |
rpoB | 760858 | p.Val351Ala | missense_variant | 0.14 |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.14 |
rpoB | 760869 | p.Val355Leu | missense_variant | 0.21 |
rpoB | 760877 | c.1071G>C | synonymous_variant | 0.22 |
rpoB | 760883 | c.1077G>C | synonymous_variant | 0.22 |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.21 |
rpoB | 760887 | p.Thr361Val | missense_variant | 0.21 |
rpoB | 760910 | c.1104C>T | synonymous_variant | 0.21 |
rpoB | 760916 | c.1110C>T | synonymous_variant | 0.2 |
rpoB | 760919 | c.1113C>T | synonymous_variant | 0.19 |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.19 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.17 |
rpoB | 760997 | c.1191G>C | synonymous_variant | 0.12 |
rpoB | 761006 | c.1200C>T | synonymous_variant | 0.14 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.21 |
rpoB | 761027 | c.1221A>C | synonymous_variant | 0.2 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.19 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.19 |
rpoB | 761051 | c.1245G>T | synonymous_variant | 0.16 |
rpoB | 761054 | c.1248G>C | synonymous_variant | 0.16 |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.16 |
rpoB | 761060 | c.1254C>G | synonymous_variant | 0.18 |
rpoB | 761063 | c.1257C>G | synonymous_variant | 0.18 |
rpoB | 761084 | c.1278C>A | synonymous_variant | 0.17 |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.12 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.15 |
rpoB | 761126 | c.1320G>T | synonymous_variant | 0.12 |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.12 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.16 |
rpoB | 761147 | c.1341C>T | synonymous_variant | 0.17 |
rpoB | 761150 | c.1344A>T | synonymous_variant | 0.16 |
rpoB | 761159 | c.1353G>T | synonymous_variant | 0.15 |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.12 |
rpoB | 761178 | p.Ser458Thr | missense_variant | 0.13 |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.13 |
rpoB | 761192 | c.1386C>T | synonymous_variant | 0.13 |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.13 |
rpoB | 761198 | c.1392G>T | synonymous_variant | 0.13 |
rpoB | 761219 | c.1413G>C | synonymous_variant | 0.14 |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.12 |
rpoB | 761558 | c.1752C>G | synonymous_variant | 0.15 |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.31 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.28 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.28 |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.29 |
rpoB | 761612 | c.1806G>T | synonymous_variant | 0.29 |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.29 |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.24 |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.24 |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.24 |
rpoB | 761666 | c.1860G>C | synonymous_variant | 0.19 |
rpoB | 761669 | c.1863C>T | synonymous_variant | 0.19 |
rpoB | 761675 | c.1869G>T | synonymous_variant | 0.22 |
rpoB | 761687 | c.1881C>T | synonymous_variant | 0.15 |
rpoB | 761690 | c.1884G>C | synonymous_variant | 0.15 |
rpoB | 761693 | c.1887G>C | synonymous_variant | 0.14 |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.12 |
rpoB | 761954 | c.2148C>T | synonymous_variant | 0.13 |
rpoB | 761955 | p.Ile717Val | missense_variant | 0.12 |
rpoB | 761969 | c.2163G>A | synonymous_variant | 0.12 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.16 |
rpoB | 762122 | c.2316C>T | synonymous_variant | 0.15 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.12 |
rpoB | 762137 | c.2331C>T | synonymous_variant | 0.12 |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.12 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.12 |
rpoB | 762149 | c.2343G>T | synonymous_variant | 0.15 |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.15 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.16 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.17 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.17 |
rpoB | 762194 | c.2388G>C | synonymous_variant | 0.17 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.15 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.17 |
rpoC | 763082 | c.-288C>T | upstream_gene_variant | 0.16 |
rpoC | 763085 | c.-285C>T | upstream_gene_variant | 0.16 |
rpoC | 763088 | c.-282C>G | upstream_gene_variant | 0.16 |
rpoC | 763094 | c.-276G>C | upstream_gene_variant | 0.16 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.15 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.12 |
rpoC | 763486 | c.117T>C | synonymous_variant | 0.12 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.14 |
rpoC | 763531 | c.162G>T | synonymous_variant | 0.14 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.12 |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.15 |
rpoC | 763618 | c.249C>T | synonymous_variant | 0.12 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.13 |
rpoC | 763796 | p.Met143Leu | missense_variant | 0.14 |
rpoC | 763801 | c.432C>T | synonymous_variant | 0.14 |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.12 |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.15 |
rpoC | 763840 | c.471G>C | synonymous_variant | 0.13 |
rpoC | 763844 | p.Arg159Lys | missense_variant | 0.12 |
rpoC | 763852 | c.483C>T | synonymous_variant | 0.14 |
rpoC | 763857 | p.Glu163Ala | missense_variant | 0.15 |
rpoC | 763861 | c.492C>T | synonymous_variant | 0.14 |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.18 |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.17 |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.17 |
rpoC | 763884 | p.Ala172Val | missense_variant | 0.83 |
rpoC | 763886 | p.Arg173Ser | missense_variant | 0.83 |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.14 |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.14 |
rpoC | 763900 | c.531G>C | synonymous_variant | 0.14 |
rpoC | 763921 | c.552G>C | synonymous_variant | 0.15 |
rpoC | 763940 | p.Ala191Ser | missense_variant | 0.12 |
rpoC | 764353 | c.984G>T | synonymous_variant | 0.14 |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.2 |
rpoC | 764371 | c.1002G>T | synonymous_variant | 0.17 |
rpoC | 764377 | c.1008C>G | synonymous_variant | 0.17 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.16 |
rpoC | 764383 | c.1014C>T | synonymous_variant | 0.16 |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.16 |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 0.24 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.21 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.2 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.2 |
rpoC | 764435 | c.1066_1068delAGGinsCGA | synonymous_variant | 0.19 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.18 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.25 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.25 |
rpoC | 764506 | c.1137C>T | synonymous_variant | 0.23 |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.26 |
rpoC | 764530 | c.1161C>T | synonymous_variant | 0.26 |
rpoC | 764533 | c.1164C>A | synonymous_variant | 0.26 |
rpoC | 764536 | c.1167G>T | synonymous_variant | 0.24 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.26 |
rpoC | 764548 | c.1179G>A | synonymous_variant | 0.25 |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.28 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.31 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.33 |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.33 |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.45 |
rpoC | 764602 | c.1233C>T | synonymous_variant | 0.45 |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.43 |
rpoC | 764626 | c.1257C>T | synonymous_variant | 0.41 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.37 |
rpoC | 764635 | c.1266C>T | synonymous_variant | 0.37 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.39 |
rpoC | 764713 | c.1344G>T | synonymous_variant | 0.27 |
rpoC | 764746 | c.1377G>T | synonymous_variant | 0.17 |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.18 |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.16 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.17 |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.14 |
rpoC | 764810 | p.Pro481Ala | missense_variant | 0.14 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.15 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.18 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.15 |
rpoC | 764869 | c.1500C>T | synonymous_variant | 0.13 |
rpoC | 764875 | c.1506C>A | synonymous_variant | 0.13 |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.13 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.13 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.15 |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.13 |
rpoC | 764932 | c.1563C>A | synonymous_variant | 0.17 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.17 |
rpoC | 765171 | p.Pro601Leu | missense_variant | 1.0 |
rpoC | 765868 | c.2499G>A | synonymous_variant | 0.21 |
rpoC | 765871 | c.2502T>G | synonymous_variant | 0.21 |
rpoC | 765875 | p.Val836Ile | missense_variant | 0.21 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.19 |
rpoC | 765907 | c.2538G>T | synonymous_variant | 0.17 |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.14 |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.15 |
rpoC | 765940 | c.2571A>T | synonymous_variant | 0.15 |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.13 |
rpoC | 766624 | c.3255G>C | synonymous_variant | 0.13 |
rpoC | 766630 | c.3261G>C | synonymous_variant | 0.13 |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.18 |
rpoC | 767002 | c.3633G>C | synonymous_variant | 0.18 |
rpoC | 767008 | c.3639G>A | synonymous_variant | 0.2 |
rpoC | 767080 | c.3711G>C | synonymous_variant | 0.12 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.22 |
rpoC | 767125 | c.3756G>C | synonymous_variant | 0.21 |
rpoC | 767134 | c.3765C>T | synonymous_variant | 0.22 |
rpoC | 767138 | c.3769C>T | synonymous_variant | 0.22 |
rpoC | 767149 | c.3780C>T | synonymous_variant | 0.19 |
rpoC | 767167 | c.3798C>T | synonymous_variant | 0.19 |
rpoC | 767180 | p.Ala1271Ser | missense_variant | 0.19 |
rpoC | 767188 | c.3819G>A | synonymous_variant | 0.21 |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.21 |
rpoC | 767197 | c.3828G>A | synonymous_variant | 0.21 |
rpoC | 767203 | c.3834C>G | synonymous_variant | 0.18 |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.18 |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.18 |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.17 |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.17 |
rpoC | 767230 | c.3861G>T | synonymous_variant | 0.18 |
rpoC | 767233 | c.3864T>C | synonymous_variant | 0.18 |
rpoC | 767254 | c.3885G>C | synonymous_variant | 0.13 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 776395 | p.Phe696Leu | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781763 | c.204C>G | synonymous_variant | 0.12 |
embR | 1417019 | p.Cys110Tyr | missense_variant | 1.0 |
atpE | 1461101 | c.57T>C | synonymous_variant | 0.2 |
atpE | 1461107 | c.63C>G | synonymous_variant | 0.2 |
atpE | 1461113 | c.69C>T | synonymous_variant | 0.2 |
atpE | 1461132 | p.Val30Ile | missense_variant | 0.18 |
atpE | 1461146 | c.102G>C | synonymous_variant | 0.17 |
atpE | 1461149 | c.105T>G | synonymous_variant | 0.17 |
atpE | 1461155 | c.111C>G | synonymous_variant | 0.17 |
atpE | 1461161 | c.117C>G | synonymous_variant | 0.17 |
atpE | 1461167 | c.123G>T | synonymous_variant | 0.16 |
atpE | 1461170 | c.126A>G | synonymous_variant | 0.15 |
atpE | 1461179 | c.135G>T | synonymous_variant | 0.15 |
atpE | 1461182 | c.138A>G | synonymous_variant | 0.15 |
atpE | 1461183 | p.Gly47Ser | missense_variant | 0.15 |
atpE | 1461197 | c.153A>C | synonymous_variant | 0.14 |
atpE | 1461219 | c.175T>C | synonymous_variant | 0.13 |
atpE | 1461230 | c.186G>T | synonymous_variant | 0.12 |
atpE | 1461233 | c.189A>G | synonymous_variant | 0.12 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471922 | n.78delT | non_coding_transcript_exon_variant | 0.21 |
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 0.21 |
rrs | 1471931 | n.87delA | non_coding_transcript_exon_variant | 0.2 |
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 0.2 |
rrs | 1471985 | n.140T>C | non_coding_transcript_exon_variant | 0.38 |
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 0.38 |
rrs | 1472030 | n.185G>A | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472031 | n.186G>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472032 | n.187G>A | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472033 | n.188A>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472035 | n.190G>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472040 | n.195T>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472041 | n.196C>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472042 | n.197T>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472043 | n.198T>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472050 | n.205G>C | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472380 | n.535G>C | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472612 | n.767G>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472734 | n.889C>T | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472741 | n.896G>A | non_coding_transcript_exon_variant | 0.62 |
rrs | 1472846 | n.1001C>T | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472847 | n.1002G>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472848 | n.1003T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472860 | n.1015C>T | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472861 | n.1016G>A | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473082 | n.1237G>A | non_coding_transcript_exon_variant | 0.69 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1473099 | n.1254T>A | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.4 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.4 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473129 | n.1284C>T | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.43 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.44 |
rrs | 1473288 | n.1443C>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473537 | n.-121C>T | upstream_gene_variant | 0.14 |
rrl | 1473770 | n.113T>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473812 | n.155G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473887 | n.230T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473888 | n.231T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473899 | n.242A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473916 | n.259C>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473923 | n.266C>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473924 | n.267_268insT | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473935 | n.278C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473937 | n.280C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473945 | n.288T>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473946 | n.289A>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473950 | n.293G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474061 | n.404T>C | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474074 | n.417C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474089 | n.432C>T | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474093 | n.436G>A | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474100 | n.443C>T | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474103 | n.446A>C | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474106 | n.449_450insCT | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474109 | n.453_454delAT | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474130 | n.473C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474181 | n.524_525insT | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474184 | n.527C>A | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474185 | n.529delA | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474263 | n.606G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474282 | n.625G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474291 | n.635_649delTTCCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 0.89 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.89 |
rrl | 1474376 | n.719T>A | non_coding_transcript_exon_variant | 0.89 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 0.89 |
rrl | 1474413 | n.756A>C | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474415 | n.759_781delCACACGCGCATACGCGCGTGTGA | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474496 | n.839C>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474507 | n.850G>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474639 | n.982G>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474640 | n.983C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474717 | n.1060A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474743 | n.1086T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474803 | n.1146G>A | non_coding_transcript_exon_variant | 0.56 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474858 | n.1201C>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475076 | n.1419C>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475090 | n.1433A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475114 | n.1457C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475120 | n.1463G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475129 | n.1472G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475573 | n.1916G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475649 | n.1992A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.4 |
rrl | 1475760 | n.2105_2106delGC | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475764 | n.2107A>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475765 | n.2108A>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476221 | n.2564T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476295 | n.2638C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1476311 | n.2654G>A | non_coding_transcript_exon_variant | 0.31 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.15 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.15 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.13 |
rpsA | 1833679 | c.138G>T | synonymous_variant | 0.14 |
rpsA | 1833685 | c.144G>C | synonymous_variant | 0.15 |
rpsA | 1833691 | c.150G>A | synonymous_variant | 0.12 |
rpsA | 1833694 | c.153G>T | synonymous_variant | 0.13 |
rpsA | 1833697 | c.156C>T | synonymous_variant | 0.12 |
rpsA | 1833700 | c.159C>T | synonymous_variant | 0.12 |
rpsA | 1833724 | c.183C>T | synonymous_variant | 0.17 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.18 |
rpsA | 1833733 | c.192C>G | synonymous_variant | 0.19 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.19 |
rpsA | 1833748 | c.207C>G | synonymous_variant | 0.21 |
rpsA | 1833751 | c.210C>T | synonymous_variant | 0.2 |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.16 |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.17 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.2 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.23 |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.19 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.2 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.18 |
rpsA | 1833838 | c.297G>T | synonymous_variant | 0.18 |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.18 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.2 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.21 |
rpsA | 1833862 | c.321G>T | synonymous_variant | 0.16 |
rpsA | 1833874 | c.333T>G | synonymous_variant | 0.12 |
rpsA | 1833892 | c.351G>A | synonymous_variant | 0.14 |
rpsA | 1833894 | p.Ala118Glu | missense_variant | 0.16 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.25 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.25 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.22 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.21 |
rpsA | 1833991 | c.450C>G | synonymous_variant | 0.15 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.13 |
rpsA | 1834009 | c.468C>T | synonymous_variant | 0.13 |
rpsA | 1834012 | c.471G>T | synonymous_variant | 0.13 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.13 |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.14 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.12 |
rpsA | 1834033 | c.492C>T | synonymous_variant | 0.12 |
rpsA | 1834246 | c.705G>T | synonymous_variant | 0.13 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.14 |
rpsA | 1834252 | c.711C>G | synonymous_variant | 0.16 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.23 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.23 |
rpsA | 1834297 | c.756C>T | synonymous_variant | 0.21 |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.2 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.2 |
rpsA | 1834339 | c.798C>T | synonymous_variant | 0.17 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.17 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.21 |
rpsA | 1834375 | c.834G>A | synonymous_variant | 0.25 |
rpsA | 1834378 | c.837T>C | synonymous_variant | 0.24 |
rpsA | 1834396 | c.855G>T | synonymous_variant | 0.22 |
rpsA | 1834405 | c.864C>T | synonymous_variant | 0.21 |
rpsA | 1834408 | c.867C>T | synonymous_variant | 0.21 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.21 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.18 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.19 |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.22 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.3 |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.31 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.31 |
rpsA | 1834480 | c.939C>G | synonymous_variant | 0.27 |
rpsA | 1834483 | c.942G>A | synonymous_variant | 0.28 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.3 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.37 |
rpsA | 1834520 | p.Ala327Ser | missense_variant | 0.24 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.18 |
rpsA | 1834543 | c.1002C>G | synonymous_variant | 0.17 |
rpsA | 1834552 | c.1011G>T | synonymous_variant | 0.17 |
rpsA | 1834555 | c.1014T>G | synonymous_variant | 0.17 |
rpsA | 1834557 | p.Ala339Gly | missense_variant | 0.17 |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 0.2 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.19 |
rpsA | 1834612 | c.1071G>C | synonymous_variant | 0.19 |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 0.18 |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 0.18 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.2 |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.2 |
rpsA | 1834666 | c.1125G>T | synonymous_variant | 0.2 |
rpsA | 1834667 | p.Ala376Ser | missense_variant | 0.2 |
rpsA | 1834684 | c.1143C>G | synonymous_variant | 0.19 |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.14 |
rpsA | 1834720 | c.1179C>G | synonymous_variant | 0.12 |
rpsA | 1834726 | c.1185C>T | synonymous_variant | 0.12 |
rpsA | 1834756 | c.1215G>A | synonymous_variant | 0.14 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2167983 | p.Gly877Asp | missense_variant | 1.0 |
PPE35 | 2169194 | c.1419C>A | synonymous_variant | 1.0 |
Rv1979c | 2222308 | p.Asp286Gly | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2518132 | c.18C>T | synonymous_variant | 1.0 |
ahpC | 2726051 | c.-142G>A | upstream_gene_variant | 1.0 |
Rv2752c | 3064632 | c.1560C>T | synonymous_variant | 1.0 |
thyA | 3073950 | c.522G>T | synonymous_variant | 0.12 |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.12 |
thyA | 3073956 | c.516G>C | synonymous_variant | 0.12 |
thyA | 3073971 | c.501C>T | synonymous_variant | 0.15 |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.14 |
thyA | 3073980 | c.492C>T | synonymous_variant | 0.13 |
thyA | 3073983 | c.489C>G | synonymous_variant | 0.13 |
thyA | 3073999 | p.Arg158Lys | missense_variant | 0.14 |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.14 |
thyA | 3074010 | c.462C>T | synonymous_variant | 0.14 |
thyA | 3074013 | c.459C>T | synonymous_variant | 0.18 |
thyA | 3074022 | c.450C>T | synonymous_variant | 0.19 |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.17 |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.16 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
fbiD | 3339435 | c.318G>A | synonymous_variant | 0.17 |
Rv3083 | 3448714 | p.Asp71His | missense_variant | 1.0 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
fprA | 3474597 | c.591C>A | synonymous_variant | 1.0 |
fprA | 3475159 | p.Asn385Asp | missense_variant | 1.0 |
rpoA | 3877587 | c.921A>G | synonymous_variant | 0.12 |
rpoA | 3877596 | c.912G>C | synonymous_variant | 0.13 |
rpoA | 3877602 | c.906C>T | synonymous_variant | 0.13 |
rpoA | 3877656 | c.852T>G | synonymous_variant | 0.16 |
rpoA | 3877662 | c.846C>T | synonymous_variant | 0.16 |
rpoA | 3877665 | c.843C>G | synonymous_variant | 0.16 |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.15 |
rpoA | 3877677 | c.831G>C | synonymous_variant | 0.18 |
rpoA | 3877680 | c.828G>T | synonymous_variant | 0.19 |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.17 |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.14 |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.18 |
rpoA | 3877728 | c.780C>G | synonymous_variant | 0.12 |
rpoA | 3877752 | p.Asp252Glu | missense_variant | 0.14 |
rpoA | 3877758 | c.750G>C | synonymous_variant | 0.15 |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.14 |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.14 |
rpoA | 3877773 | c.735G>C | synonymous_variant | 0.15 |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.15 |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.15 |
rpoA | 3877785 | c.723C>A | synonymous_variant | 0.15 |
rpoA | 3878082 | c.426T>C | synonymous_variant | 0.12 |
rpoA | 3878102 | p.Val136Ile | missense_variant | 0.14 |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.14 |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.14 |
rpoA | 3878127 | c.381G>C | synonymous_variant | 0.14 |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.13 |
rpoA | 3878143 | p.Gly122Asp | missense_variant | 0.16 |
rpoA | 3878160 | c.348C>G | synonymous_variant | 0.23 |
rpoA | 3878169 | c.339G>C | synonymous_variant | 0.23 |
rpoA | 3878175 | c.333G>T | synonymous_variant | 0.14 |
rpoA | 3878184 | c.324C>T | synonymous_variant | 0.19 |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.14 |
rpoA | 3878196 | p.Glu104Ala | missense_variant | 0.14 |
rpoA | 3878205 | c.303T>A | synonymous_variant | 0.22 |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.25 |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.15 |
rpoA | 3878274 | c.234G>C | synonymous_variant | 0.14 |
rpoA | 3878283 | p.Glu75Asp | missense_variant | 0.15 |
rpoA | 3878307 | c.201C>T | synonymous_variant | 0.13 |
rpoA | 3878310 | c.198G>T | synonymous_variant | 0.13 |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.13 |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.13 |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.13 |
clpC1 | 4038795 | p.Ser637Thr | missense_variant | 0.12 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.14 |
clpC1 | 4038842 | c.1863G>T | synonymous_variant | 0.17 |
clpC1 | 4038845 | c.1858_1860delTCGinsAGC | synonymous_variant | 0.16 |
clpC1 | 4038860 | c.1845G>T | synonymous_variant | 0.2 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.21 |
clpC1 | 4038881 | c.1824C>A | synonymous_variant | 0.21 |
clpC1 | 4038884 | c.1821C>T | synonymous_variant | 0.21 |
clpC1 | 4038890 | c.1815G>A | synonymous_variant | 0.18 |
clpC1 | 4038896 | c.1809C>A | synonymous_variant | 0.16 |
clpC1 | 4039118 | c.1587C>G | synonymous_variant | 0.14 |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.14 |
clpC1 | 4039136 | c.1569C>T | synonymous_variant | 0.19 |
clpC1 | 4039139 | c.1566G>A | synonymous_variant | 0.18 |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.18 |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.19 |
clpC1 | 4039166 | c.1539G>A | synonymous_variant | 0.16 |
clpC1 | 4039169 | c.1536A>G | synonymous_variant | 0.16 |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.16 |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.16 |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.15 |
clpC1 | 4039190 | c.1515C>T | synonymous_variant | 0.19 |
clpC1 | 4039196 | c.1509G>A | synonymous_variant | 0.18 |
clpC1 | 4039199 | p.Ala502Glu | missense_variant | 0.17 |
clpC1 | 4039208 | c.1497C>G | synonymous_variant | 0.17 |
clpC1 | 4039682 | c.1023C>G | synonymous_variant | 0.17 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.23 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.22 |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.19 |
clpC1 | 4039739 | c.966C>G | synonymous_variant | 0.19 |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.16 |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.17 |
clpC1 | 4039769 | c.936C>T | synonymous_variant | 0.22 |
clpC1 | 4039775 | c.930G>C | synonymous_variant | 0.21 |
clpC1 | 4039778 | c.927A>G | synonymous_variant | 0.21 |
clpC1 | 4039793 | c.912C>G | synonymous_variant | 0.23 |
clpC1 | 4039805 | c.900C>T | synonymous_variant | 0.33 |
clpC1 | 4039814 | c.891C>G | synonymous_variant | 0.37 |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.32 |
clpC1 | 4039820 | c.885T>G | synonymous_variant | 0.32 |
clpC1 | 4039831 | c.874T>C | synonymous_variant | 0.32 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.21 |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.24 |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.19 |
clpC1 | 4039907 | c.798G>A | synonymous_variant | 0.19 |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.19 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.15 |
clpC1 | 4040090 | p.Ser205Cys | missense_variant | 0.12 |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.12 |
clpC1 | 4040517 | p.Val63Ala | missense_variant | 0.88 |
embC | 4240671 | p.Thr270Ile | missense_variant | 0.95 |
embC | 4241042 | p.Asn394Asp | missense_variant | 1.0 |
embC | 4241816 | p.Asn652His | missense_variant | 0.12 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4243848 | p.Val206Met | missense_variant | 1.0 |
embA | 4245218 | c.1986C>T | synonymous_variant | 1.0 |
embA | 4245969 | p.Pro913Ser | missense_variant | 1.0 |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 |
aftB | 4267775 | c.1062T>C | synonymous_variant | 0.12 |
aftB | 4268081 | c.756A>G | synonymous_variant | 0.13 |
ubiA | 4269031 | p.Gly268Asp | missense_variant | 1.0 |
ubiA | 4269387 | p.Glu149Asp | missense_variant | 1.0 |
aftB | 4269606 | c.-770T>C | upstream_gene_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
whiB6 | 4338603 | c.-82C>T | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
gid | 4407873 | c.330G>T | synonymous_variant | 1.0 |