Rv1630 - c.855G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
101 Sensitive
2 RR-TB
30 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 123 |
| 3 | |
| lineage1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4 | 5 |
| lineage4.8 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1 | 7 |
| lineage4.3.2.1 | 4 |
| La3;lineage4.9 | 5 |
| lineage4.4.1.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage6.1.1 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage2.2.2 | 1 |
| lineage3 | 4 |
| lineage1.1.2 | 2 |
| La1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096410 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR29096179 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR2513259 | Other | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR3675248 | Other | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR2514692 | Other | None | ERR987722 | MDR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None |
|---|
