TB-Profiler result

Run: ERR3799304

Summary

Run ID: ERR3799304

Sample name:

Date: 01-04-2023 03:06:26

Number of reads: 3164986

Percentage reads mapped: 69.88

Strain: lineage6.1.1

Drug-resistance: Other


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage6 West-Africa 2 AFRI_1 RD702 0.96
lineage6.1.1 West-Africa 2 AFRI_1 RD702 0.99
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247580 p.Ala356Val missense_variant 0.26 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6446 p.Ala403Ser missense_variant 0.96
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7480 p.Phe60Tyr missense_variant 0.21
gyrA 7502 c.201C>T synonymous_variant 0.21
gyrA 7526 c.225G>T synonymous_variant 0.22
gyrA 7541 c.240C>G synonymous_variant 0.22
gyrA 7547 c.246C>T synonymous_variant 0.22
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7601 c.300C>G synonymous_variant 0.23
gyrA 7626 c.325C>T synonymous_variant 0.21
gyrA 7643 c.342C>T synonymous_variant 0.2
gyrA 8339 c.1038A>G synonymous_variant 0.2
gyrA 8340 p.Ala347Ser missense_variant 0.2
gyrA 8360 c.1059G>A synonymous_variant 0.23
gyrA 8372 c.1071G>T synonymous_variant 0.22
gyrA 8375 c.1074G>C synonymous_variant 0.21
gyrA 8382 p.Leu361Met missense_variant 0.21
gyrA 8392 p.Tyr364Phe missense_variant 0.19
gyrA 8399 c.1098T>C synonymous_variant 0.21
gyrA 8402 p.Asp367Glu missense_variant 0.21
gyrA 8408 c.1107A>G synonymous_variant 0.21
gyrA 8417 c.1116C>G synonymous_variant 0.22
gyrA 8420 c.1119T>C synonymous_variant 0.22
gyrA 8423 c.1122G>T synonymous_variant 0.22
gyrA 8426 c.1125G>T synonymous_variant 0.21
gyrA 8429 c.1128C>G synonymous_variant 0.22
gyrA 8447 c.1146C>A synonymous_variant 0.22
gyrA 8450 c.1149G>A synonymous_variant 0.22
gyrA 8453 c.1152A>C synonymous_variant 0.22
gyrA 8462 c.1161A>C synonymous_variant 0.22
gyrA 8480 c.1179C>T synonymous_variant 0.24
gyrA 8486 c.1185T>C synonymous_variant 0.22
gyrA 8489 c.1188A>G synonymous_variant 0.21
gyrA 8492 c.1191G>C synonymous_variant 0.21
gyrA 8493 p.Leu398Phe missense_variant 0.78
gyrA 8504 c.1203G>C synonymous_variant 0.22
gyrA 8516 c.1215T>C synonymous_variant 0.21
gyrA 8519 c.1218A>G synonymous_variant 0.2
gyrA 8531 c.1230G>T synonymous_variant 0.21
gyrA 8535 p.Glu412Gln missense_variant 0.22
gyrA 8543 c.1242C>T synonymous_variant 0.23
gyrA 8546 c.1245T>C synonymous_variant 0.23
gyrA 8555 c.1254G>C synonymous_variant 0.22
gyrA 8561 c.1260A>C synonymous_variant 0.23
gyrA 8585 c.1284C>T synonymous_variant 0.23
gyrA 8588 c.1287G>A synonymous_variant 0.23
gyrA 8619 c.1318T>C synonymous_variant 0.26
gyrA 8624 c.1323G>T synonymous_variant 0.26
gyrA 8627 c.1326C>A synonymous_variant 0.25
gyrA 8636 c.1335A>C synonymous_variant 0.26
gyrA 8642 c.1341A>G synonymous_variant 0.26
gyrA 8655 p.Ile452Val missense_variant 0.27
gyrA 8672 c.1371A>G synonymous_variant 0.3
gyrA 8678 c.1377G>A synonymous_variant 0.29
gyrA 8694 c.1393C>T synonymous_variant 0.29
gyrA 8711 c.1410A>C synonymous_variant 0.3
gyrA 8714 c.1413A>G synonymous_variant 0.29
gyrA 8717 c.1416C>G synonymous_variant 0.29
gyrA 8720 c.1419G>A synonymous_variant 0.29
gyrA 8729 c.1428T>C synonymous_variant 0.3
gyrA 8747 c.1446A>G synonymous_variant 0.3
gyrA 8765 p.Asp488Glu missense_variant 0.31
gyrA 8767 p.Arg489Lys missense_variant 0.31
gyrA 8780 p.Asp493Glu missense_variant 0.32
gyrA 8786 c.1485T>C synonymous_variant 0.32
gyrA 8789 c.1488C>T synonymous_variant 0.3
gyrA 8792 c.1491G>C synonymous_variant 0.3
gyrA 8798 c.1497C>T synonymous_variant 0.3
gyrA 8810 c.1509A>C synonymous_variant 0.29
gyrA 8813 p.Asp504Glu missense_variant 0.3
gyrA 8818 p.Ser506Asn missense_variant 0.29
gyrA 8829 c.1528T>C synonymous_variant 0.29
gyrA 8840 c.1539C>G synonymous_variant 0.27
gyrA 8852 c.1551T>C synonymous_variant 0.23
gyrA 8858 c.1557T>G synonymous_variant 0.24
gyrA 8870 c.1569G>C synonymous_variant 0.25
gyrA 8873 c.1572A>T synonymous_variant 0.24
gyrA 8888 c.1587C>G synonymous_variant 0.27
gyrA 8897 c.1596T>C synonymous_variant 0.3
gyrA 8903 c.1602T>C synonymous_variant 0.29
gyrA 8915 c.1614A>G synonymous_variant 0.28
gyrA 8924 c.1623C>T synonymous_variant 0.26
gyrA 8930 c.1629C>G synonymous_variant 0.26
gyrA 8933 c.1632G>C synonymous_variant 0.25
gyrA 8936 c.1635G>A synonymous_variant 0.25
gyrA 8939 c.1638T>C synonymous_variant 0.24
gyrA 8942 c.1641G>C synonymous_variant 0.24
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.24
gyrA 8983 p.Cys561Ser missense_variant 0.28
gyrA 8987 c.1686C>G synonymous_variant 0.27
gyrA 8990 c.1689C>G synonymous_variant 0.27
gyrA 8996 c.1695T>C synonymous_variant 0.29
gyrA 8998 p.Leu566Trp missense_variant 0.29
gyrA 9003 c.1702C>T synonymous_variant 0.29
gyrA 9023 c.1722A>C synonymous_variant 0.29
gyrA 9029 c.1728T>A synonymous_variant 0.26
gyrA 9032 c.1731T>C synonymous_variant 0.26
gyrA 9035 c.1734G>C synonymous_variant 0.26
gyrA 9038 c.1737C>G synonymous_variant 0.26
gyrA 9050 p.Asp583Glu missense_variant 0.25
gyrA 9051 c.1750T>C synonymous_variant 0.26
gyrA 9062 c.1761C>A synonymous_variant 0.26
gyrA 9071 c.1770G>C synonymous_variant 0.23
gyrA 9074 c.1773G>C synonymous_variant 0.23
gyrA 9080 c.1779G>T synonymous_variant 0.23
gyrA 9089 c.1788G>C synonymous_variant 0.22
gyrA 9095 c.1794C>T synonymous_variant 0.23
gyrA 9101 c.1800A>G synonymous_variant 0.22
gyrA 9104 c.1803C>A synonymous_variant 0.22
gyrA 9110 c.1809G>A synonymous_variant 0.22
gyrA 9128 c.1827C>A synonymous_variant 0.23
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9147 p.Gly616Ser missense_variant 0.2
gyrA 9153 p.Thr618Glu missense_variant 0.2
gyrA 9161 c.1860C>G synonymous_variant 0.21
gyrA 9167 c.1866C>T synonymous_variant 0.21
gyrA 9182 c.1881T>C synonymous_variant 0.21
gyrA 9183 p.Arg628Lys missense_variant 0.2
gyrA 9197 c.1896G>C synonymous_variant 0.25
gyrA 9230 c.1929T>C synonymous_variant 0.27
gyrA 9236 c.1935G>C synonymous_variant 0.26
gyrA 9242 c.1941A>C synonymous_variant 0.27
gyrA 9248 c.1947G>C synonymous_variant 0.26
gyrA 9252 p.Val651Ile missense_variant 0.25
gyrA 9266 c.1965C>T synonymous_variant 0.24
gyrA 9284 c.1983T>C synonymous_variant 0.21
gyrA 9287 c.1986G>C synonymous_variant 0.21
gyrA 9291 c.1990C>T synonymous_variant 0.2
gyrA 9296 c.1995T>C synonymous_variant 0.2
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9315 c.2014C>T synonymous_variant 0.2
gyrA 9326 c.2025G>T synonymous_variant 0.19
fgd1 490971 c.189A>G synonymous_variant 0.22
fgd1 490974 c.192T>C synonymous_variant 0.23
fgd1 490980 p.Asn66Lys missense_variant 0.24
fgd1 490983 c.201G>A synonymous_variant 0.25
fgd1 490988 p.Leu69Gln missense_variant 0.25
fgd1 490995 c.213C>G synonymous_variant 0.25
fgd1 490998 c.216T>G synonymous_variant 0.25
fgd1 491007 c.225G>C synonymous_variant 0.26
fgd1 491013 c.231C>G synonymous_variant 0.25
fgd1 491016 c.234C>G synonymous_variant 0.25
fgd1 491094 c.312C>T synonymous_variant 0.2
fgd1 491110 p.Ala110Ser missense_variant 0.19
fgd1 491115 c.333G>C synonymous_variant 0.21
fgd1 491136 c.354C>T synonymous_variant 0.24
fgd1 491144 p.Ala121Glu missense_variant 0.22
fgd1 491168 p.Phe129Tyr missense_variant 0.2
fgd1 491668 p.Lys296Glu missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575713 c.366G>A synonymous_variant 0.2
rpoB 760196 c.390C>G synonymous_variant 0.23
rpoB 760235 c.429T>C synonymous_variant 0.27
rpoB 760244 c.438G>C synonymous_variant 0.27
rpoB 760274 c.468G>A synonymous_variant 0.27
rpoB 760295 c.489C>T synonymous_variant 0.27
rpoB 760307 c.501T>C synonymous_variant 0.26
rpoB 760310 c.504G>C synonymous_variant 0.26
rpoB 760328 c.522G>C synonymous_variant 0.26
rpoB 760331 c.525G>C synonymous_variant 0.27
rpoB 760337 c.531C>G synonymous_variant 0.27
rpoB 760340 c.534G>T synonymous_variant 0.25
rpoB 760358 c.552C>G synonymous_variant 0.28
rpoB 760361 c.555T>C synonymous_variant 0.29
rpoB 760370 c.564C>G synonymous_variant 0.28
rpoB 760376 p.Asp190Glu missense_variant 0.27
rpoB 760380 p.Thr192Leu missense_variant 0.26
rpoB 760403 c.597C>T synonymous_variant 0.26
rpoB 760412 c.606C>T synonymous_variant 0.25
rpoB 760418 c.612G>C synonymous_variant 0.23
rpoB 760424 c.618C>G synonymous_variant 0.24
rpoB 760430 c.624T>C synonymous_variant 0.24
rpoB 760457 c.651C>T synonymous_variant 0.27
rpoB 760472 c.666C>T synonymous_variant 0.25
rpoB 760475 c.669A>G synonymous_variant 0.25
rpoB 760478 c.672C>T synonymous_variant 0.24
rpoB 760481 c.675G>T synonymous_variant 0.24
rpoB 760484 c.678A>G synonymous_variant 0.24
rpoB 760493 c.687C>G synonymous_variant 0.26
rpoB 760520 c.714C>G synonymous_variant 0.27
rpoB 760522 p.Ser239Asn missense_variant 0.27
rpoB 760526 c.720G>A synonymous_variant 0.27
rpoB 760532 c.726T>C synonymous_variant 0.26
rpoB 760533 p.Val243Thr missense_variant 0.26
rpoB 760547 c.741G>C synonymous_variant 0.28
rpoB 760563 p.Arg253Met missense_variant 0.27
rpoB 760591 p.Val262Ala missense_variant 0.27
rpoB 760601 c.795C>T synonymous_variant 0.25
rpoB 760611 c.805T>C synonymous_variant 0.24
rpoB 760622 c.816C>T synonymous_variant 0.24
rpoB 760646 c.840C>G synonymous_variant 0.23
rpoB 760649 c.843G>C synonymous_variant 0.25
rpoB 760655 c.849A>G synonymous_variant 0.25
rpoB 760661 c.855A>C synonymous_variant 0.24
rpoB 760670 c.864G>C synonymous_variant 0.24
rpoB 760674 c.868T>C synonymous_variant 0.27
rpoB 760679 c.873A>G synonymous_variant 0.26
rpoB 760683 c.877T>C synonymous_variant 0.28
rpoB 760724 c.918T>C synonymous_variant 0.25
rpoB 760730 c.924T>C synonymous_variant 0.26
rpoB 760748 c.942C>G synonymous_variant 0.29
rpoB 760757 c.951T>C synonymous_variant 0.3
rpoB 760759 p.Val318Ala missense_variant 0.3
rpoB 760769 c.963C>G synonymous_variant 0.31
rpoB 760793 c.987A>G synonymous_variant 0.32
rpoB 760805 c.999G>C synonymous_variant 0.31
rpoB 760817 c.1011A>G synonymous_variant 0.3
rpoB 760820 c.1014T>C synonymous_variant 0.29
rpoB 760826 c.1020C>G synonymous_variant 0.3
rpoB 760830 c.1024T>C synonymous_variant 0.31
rpoB 760841 c.1035T>C synonymous_variant 0.32
rpoB 760845 p.Thr347Pro missense_variant 0.31
rpoB 760855 p.Thr350Met missense_variant 0.69
rpoB 760886 c.1080A>G synonymous_variant 0.3
rpoB 760916 c.1110C>G synonymous_variant 0.27
rpoB 760919 c.1113C>G synonymous_variant 0.27
rpoB 760925 c.1119T>C synonymous_variant 0.26
rpoB 760928 c.1122G>C synonymous_variant 0.26
rpoB 760931 c.1125C>G synonymous_variant 0.26
rpoB 760937 c.1131G>A synonymous_variant 0.27
rpoB 760946 c.1140A>G synonymous_variant 0.27
rpoB 760969 p.Ser388Leu missense_variant 0.75
rpoB 760973 c.1167G>C synonymous_variant 0.25
rpoB 760982 c.1176G>T synonymous_variant 0.24
rpoB 760985 c.1179G>T synonymous_variant 0.25
rpoB 760991 c.1185G>T synonymous_variant 0.24
rpoB 761006 c.1200C>T synonymous_variant 0.26
rpoB 761015 c.1209G>C synonymous_variant 0.25
rpoB 761021 c.1215G>C synonymous_variant 0.26
rpoB 761027 c.1221A>G synonymous_variant 0.26
rpoB 761036 c.1230G>C synonymous_variant 0.28
rpoB 761037 c.1231T>C synonymous_variant 0.29
rpoB 761051 c.1245G>T synonymous_variant 0.3
rpoB 761057 c.1251G>C synonymous_variant 0.3
rpoB 761060 c.1254C>G synonymous_variant 0.29
rpoB 761063 c.1257C>G synonymous_variant 0.29
rpoB 761096 c.1290G>C synonymous_variant 0.28
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.28
rpoB 761102 c.1296A>G synonymous_variant 0.29
rpoB 761132 c.1326G>T synonymous_variant 0.26
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 0.26
rpoB 761150 c.1344A>C synonymous_variant 0.29
rpoB 761168 c.1362C>G synonymous_variant 0.27
rpoB 761180 c.1374A>C synonymous_variant 0.27
rpoB 761189 c.1383T>G synonymous_variant 0.24
rpoB 761192 c.1386C>G synonymous_variant 0.23
rpoB 761195 c.1389G>C synonymous_variant 0.23
rpoB 761198 c.1392G>C synonymous_variant 0.23
rpoB 761240 c.1434C>T synonymous_variant 0.2
rpoB 761345 c.1539G>T synonymous_variant 0.21
rpoB 761354 c.1548C>T synonymous_variant 0.21
rpoB 761360 c.1554T>C synonymous_variant 0.21
rpoB 761362 p.Ser519Thr missense_variant 0.22
rpoB 761374 p.Val523Glu missense_variant 0.22
rpoB 761414 c.1608A>G synonymous_variant 0.23
rpoB 761423 c.1617T>C synonymous_variant 0.23
rpoB 761432 c.1626C>T synonymous_variant 0.23
rpoB 761435 c.1629T>C synonymous_variant 0.23
rpoB 761438 c.1632G>C synonymous_variant 0.23
rpoB 761444 c.1638T>C synonymous_variant 0.23
rpoB 761452 p.Val549Glu missense_variant 0.22
rpoB 761457 p.Pro551Ser missense_variant 0.22
rpoB 761465 c.1659G>A synonymous_variant 0.22
rpoB 761471 c.1665C>T synonymous_variant 0.22
rpoB 761477 c.1671C>T synonymous_variant 0.23
rpoB 761492 c.1686G>C synonymous_variant 0.23
rpoB 761504 c.1698C>G synonymous_variant 0.22
rpoB 761510 c.1704T>C synonymous_variant 0.24
rpoB 761531 c.1725C>G synonymous_variant 0.23
rpoB 761537 c.1731C>G synonymous_variant 0.22
rpoB 761558 c.1752C>G synonymous_variant 0.23
rpoB 761570 c.1764T>C synonymous_variant 0.23
rpoB 761573 c.1767C>G synonymous_variant 0.23
rpoB 761579 c.1773G>C synonymous_variant 0.23
rpoB 761606 c.1800C>G synonymous_variant 0.24
rpoB 761612 c.1806G>T synonymous_variant 0.23
rpoB 761615 c.1809A>C synonymous_variant 0.24
rpoB 761636 c.1830G>T synonymous_variant 0.23
rpoB 761645 c.1839C>A synonymous_variant 0.21
rpoB 761648 c.1842T>C synonymous_variant 0.22
rpoB 761666 c.1860G>C synonymous_variant 0.25
rpoB 761690 c.1884G>C synonymous_variant 0.24
rpoB 761723 p.Glu639Asp missense_variant 1.0
rpoB 761750 c.1944G>C synonymous_variant 0.21
rpoB 761772 p.His656Ala missense_variant 0.2
rpoB 761778 p.Asn658Asp missense_variant 0.21
rpoB 761791 p.Arg662His missense_variant 0.2
rpoB 761828 c.2022C>T synonymous_variant 0.19
rpoB 761885 c.2079T>C synonymous_variant 0.21
rpoB 761891 c.2085G>C synonymous_variant 0.23
rpoB 761916 p.Asp704Asn missense_variant 0.2
rpoB 761921 c.2115C>T synonymous_variant 0.21
rpoB 761930 c.2124G>C synonymous_variant 0.23
rpoB 761954 c.2148C>G synonymous_variant 0.25
rpoB 762008 c.2202C>G synonymous_variant 0.28
rpoB 762014 c.2208C>T synonymous_variant 0.26
rpoB 762038 c.2232C>T synonymous_variant 0.3
rpoB 762047 c.2241G>A synonymous_variant 0.31
rpoB 762053 c.2247T>C synonymous_variant 0.33
rpoB 762062 c.2256T>C synonymous_variant 0.34
rpoB 762065 c.2259T>C synonymous_variant 0.33
rpoB 762083 c.2277T>C synonymous_variant 0.34
rpoB 762086 c.2280G>C synonymous_variant 0.35
rpoB 762101 c.2295C>G synonymous_variant 0.36
rpoB 762114 p.Ile770Val missense_variant 0.35
rpoB 762131 c.2325C>G synonymous_variant 0.35
rpoB 762134 c.2328C>G synonymous_variant 0.35
rpoB 762143 c.2337T>C synonymous_variant 0.36
rpoB 762167 c.2361T>C synonymous_variant 0.36
rpoB 762185 c.2379G>C synonymous_variant 0.36
rpoB 762233 c.2427G>T synonymous_variant 0.33
rpoB 762254 c.2448T>G synonymous_variant 0.33
rpoB 762257 c.2451C>G synonymous_variant 0.32
rpoB 762266 c.2460T>C synonymous_variant 0.32
rpoB 762281 c.2475G>A synonymous_variant 0.3
rpoB 762284 c.2478G>C synonymous_variant 0.3
rpoB 762293 c.2487T>C synonymous_variant 0.31
rpoB 762317 c.2511A>G synonymous_variant 0.3
rpoB 762338 c.2532T>C synonymous_variant 0.3
rpoB 762341 c.2535G>C synonymous_variant 0.3
rpoB 762347 c.2541T>C synonymous_variant 0.3
rpoB 762362 p.Glu852Asp missense_variant 0.3
rpoB 762369 c.2563T>C synonymous_variant 0.3
rpoC 762395 c.-975G>C upstream_gene_variant 0.27
rpoC 762398 c.-972T>C upstream_gene_variant 0.25
rpoC 762401 c.-969G>C upstream_gene_variant 0.25
rpoC 762404 c.-966T>C upstream_gene_variant 0.26
rpoC 762416 c.-954A>G upstream_gene_variant 0.27
rpoC 762431 c.-939C>T upstream_gene_variant 0.26
rpoC 762441 c.-929C>T upstream_gene_variant 0.25
rpoC 762449 c.-921C>A upstream_gene_variant 0.26
rpoC 762470 c.-900G>C upstream_gene_variant 0.27
rpoC 762491 c.-879T>C upstream_gene_variant 0.27
rpoC 762509 c.-861T>G upstream_gene_variant 0.23
rpoB 762510 p.Ala902Pro missense_variant 0.23
rpoC 762902 c.-468C>T upstream_gene_variant 0.3
rpoC 762917 c.-453C>T upstream_gene_variant 0.27
rpoC 762929 c.-441G>T upstream_gene_variant 0.27
rpoC 762962 c.-408C>T upstream_gene_variant 0.31
rpoC 762983 c.-387C>G upstream_gene_variant 0.29
rpoC 762995 c.-375G>T upstream_gene_variant 0.27
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.27
rpoC 763040 c.-330C>G upstream_gene_variant 0.28
rpoC 763050 c.-320C>T upstream_gene_variant 0.27
rpoC 763070 c.-300T>C upstream_gene_variant 0.28
rpoC 763082 c.-288C>T upstream_gene_variant 0.27
rpoC 763085 c.-285C>G upstream_gene_variant 0.26
rpoC 763115 c.-255T>C upstream_gene_variant 0.26
rpoC 763127 c.-243G>C upstream_gene_variant 0.23
rpoC 763166 c.-204A>G upstream_gene_variant 0.24
rpoC 763169 c.-201A>G upstream_gene_variant 0.24
rpoC 763202 c.-168A>C upstream_gene_variant 0.22
rpoC 763205 c.-165G>T upstream_gene_variant 0.2
rpoC 763206 c.-164_-162delAGTinsTCC upstream_gene_variant 0.2
rpoC 763226 c.-144A>G upstream_gene_variant 0.19
rpoC 763441 c.72C>T synonymous_variant 0.23
rpoC 763444 c.75T>C synonymous_variant 0.23
rpoC 763456 c.87A>G synonymous_variant 0.26
rpoC 763486 c.117T>G synonymous_variant 0.25
rpoC 763528 c.159G>A synonymous_variant 0.3
rpoC 763546 c.177A>G synonymous_variant 0.3
rpoC 763570 c.201G>C synonymous_variant 0.3
rpoC 763594 c.225C>T synonymous_variant 0.33
rpoC 763603 c.234C>T synonymous_variant 0.34
rpoC 763618 c.249C>T synonymous_variant 0.34
rpoC 763636 c.267T>C synonymous_variant 0.36
rpoC 763660 c.291T>G synonymous_variant 0.37
rpoC 763669 c.300C>G synonymous_variant 0.36
rpoC 763675 c.306C>G synonymous_variant 0.35
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.31
rpoC 763709 c.340C>T synonymous_variant 0.31
rpoC 763714 c.345G>C synonymous_variant 0.33
rpoC 763726 c.357C>T synonymous_variant 0.37
rpoC 763732 c.363C>G synonymous_variant 0.39
rpoC 763741 c.372C>T synonymous_variant 0.39
rpoC 763744 c.375G>C synonymous_variant 0.39
rpoC 763765 c.396T>G synonymous_variant 0.4
rpoC 763771 c.402C>T synonymous_variant 0.41
rpoC 763780 c.411C>G synonymous_variant 0.4
rpoC 763801 c.432C>G synonymous_variant 0.39
rpoC 763807 c.438T>C synonymous_variant 0.39
rpoC 763836 p.Ala156Val missense_variant 0.31
rpoC 763851 p.Ala161Gly missense_variant 0.28
rpoC 763855 c.486C>T synonymous_variant 0.28
rpoC 763858 c.489A>G synonymous_variant 0.27
rpoC 763872 p.Gly168Ala missense_variant 0.29
rpoC 763876 p.Glu169Asp missense_variant 0.3
rpoC 763879 c.510A>G synonymous_variant 0.29
rpoC 763888 c.519G>C synonymous_variant 0.29
rpoC 763891 c.522G>T synonymous_variant 0.29
rpoC 763894 c.525A>G synonymous_variant 0.3
rpoC 763919 c.550C>T synonymous_variant 0.33
rpoC 763936 c.567C>G synonymous_variant 0.31
rpoC 763939 c.570G>A synonymous_variant 0.32
rpoC 763951 c.582G>A synonymous_variant 0.34
rpoC 763963 c.594C>G synonymous_variant 0.34
rpoC 763967 p.Gly200Ser missense_variant 0.32
rpoC 763972 c.603C>T synonymous_variant 0.33
rpoC 763987 c.618C>T synonymous_variant 0.32
rpoC 763996 c.627T>C synonymous_variant 0.32
rpoC 764005 c.636G>C synonymous_variant 0.33
rpoC 764011 c.642T>C synonymous_variant 0.32
rpoC 764024 c.655T>C synonymous_variant 0.35
rpoC 764040 p.Ser224Thr missense_variant 0.33
rpoC 764044 c.675T>G synonymous_variant 0.34
rpoC 764059 c.690G>T synonymous_variant 0.35
rpoC 764083 c.714A>G synonymous_variant 0.38
rpoC 764101 c.732C>G synonymous_variant 0.35
rpoC 764140 c.771C>T synonymous_variant 0.37
rpoC 764159 c.790C>T synonymous_variant 0.31
rpoC 764167 c.798G>A synonymous_variant 0.31
rpoC 764188 c.819A>G synonymous_variant 0.31
rpoC 764195 p.Ser276Ile missense_variant 0.29
rpoC 764215 c.846A>C synonymous_variant 0.27
rpoC 764218 c.849C>T synonymous_variant 0.27
rpoC 764242 c.873C>T synonymous_variant 0.25
rpoC 764245 c.876C>A synonymous_variant 0.24
rpoC 764246 c.877_879delCTCinsTTG synonymous_variant 0.24
rpoC 764263 c.894G>C synonymous_variant 0.25
rpoC 764266 c.897T>C synonymous_variant 0.25
rpoC 764278 c.909A>G synonymous_variant 0.24
rpoC 764293 c.924G>C synonymous_variant 0.23
rpoC 764320 c.951C>G synonymous_variant 0.2
rpoC 764446 c.1077T>C synonymous_variant 0.21
rpoC 764449 c.1080G>C synonymous_variant 0.21
rpoC 764452 c.1083T>C synonymous_variant 0.22
rpoC 764458 c.1089G>C synonymous_variant 0.24
rpoC 764461 c.1092A>G synonymous_variant 0.25
rpoC 764497 c.1128A>G synonymous_variant 0.31
rpoC 764503 c.1134G>C synonymous_variant 0.32
rpoC 764521 c.1152T>C synonymous_variant 0.31
rpoC 764527 c.1158C>T synonymous_variant 0.31
rpoC 764536 c.1167G>T synonymous_variant 0.32
rpoC 764539 c.1170C>G synonymous_variant 0.32
rpoC 764554 c.1185C>T synonymous_variant 0.32
rpoC 764575 c.1206T>G synonymous_variant 0.35
rpoC 764578 c.1209C>G synonymous_variant 0.35
rpoC 764593 c.1224C>T synonymous_variant 0.3
rpoC 764605 c.1236G>A synonymous_variant 0.27
rpoC 764626 c.1257C>T synonymous_variant 0.29
rpoC 764650 c.1281G>T synonymous_variant 0.25
rpoC 764668 c.1299C>T synonymous_variant 0.23
rpoC 764686 c.1317C>T synonymous_variant 0.23
rpoC 764696 c.1327C>T synonymous_variant 0.23
rpoC 764746 c.1377G>C synonymous_variant 0.21
rpoC 764764 c.1395T>C synonymous_variant 0.23
rpoC 764782 c.1413C>T synonymous_variant 0.23
rpoC 764797 c.1428G>C synonymous_variant 0.21
rpoC 764803 c.1434C>G synonymous_variant 0.21
rpoC 764809 c.1440C>T synonymous_variant 0.2
rpoC 765370 c.2001G>C synonymous_variant 0.19
rpoC 765383 p.Met672Leu missense_variant 0.22
rpoC 765391 c.2022C>T synonymous_variant 0.24
rpoC 765406 c.2037G>T synonymous_variant 0.24
rpoC 765409 c.2040T>C synonymous_variant 0.24
rpoC 765412 c.2043T>C synonymous_variant 0.25
rpoC 765421 c.2052C>G synonymous_variant 0.26
rpoC 765452 p.Ala695Ser missense_variant 0.31
rpoC 765466 c.2097C>T synonymous_variant 0.32
rpoC 765478 c.2109T>C synonymous_variant 0.31
rpoC 765493 c.2124G>C synonymous_variant 0.31
rpoC 765499 c.2130C>G synonymous_variant 0.31
rpoC 765508 c.2139C>G synonymous_variant 0.32
rpoC 765517 c.2148C>G synonymous_variant 0.34
rpoC 765529 c.2160C>T synonymous_variant 0.36
rpoC 765541 c.2172C>G synonymous_variant 0.34
rpoC 765553 c.2184C>T synonymous_variant 0.32
rpoC 765556 c.2187G>C synonymous_variant 0.33
rpoC 765562 c.2193G>C synonymous_variant 0.33
rpoC 765571 c.2202C>T synonymous_variant 0.33
rpoC 765578 c.2209C>T synonymous_variant 0.34
rpoC 765622 p.Glu751Asp missense_variant 0.33
rpoC 765625 c.2256C>T synonymous_variant 0.32
rpoC 765628 c.2259G>C synonymous_variant 0.32
rpoC 765658 c.2289C>T synonymous_variant 0.31
rpoC 765700 c.2331T>C synonymous_variant 0.3
rpoC 765728 p.Gln787Lys missense_variant 0.3
rpoC 765734 c.2365T>C synonymous_variant 0.3
rpoC 765739 c.2370G>C synonymous_variant 0.28
rpoC 765752 p.Asp795Ser missense_variant 0.3
rpoC 765772 c.2403C>G synonymous_variant 0.3
rpoC 765784 c.2415C>G synonymous_variant 0.3
rpoC 765790 c.2421C>T synonymous_variant 0.29
rpoC 765793 c.2424C>G synonymous_variant 0.29
rpoC 765796 c.2427C>T synonymous_variant 0.29
rpoC 765814 c.2445A>G synonymous_variant 0.29
rpoC 765826 c.2457T>C synonymous_variant 0.3
rpoC 765835 c.2466C>T synonymous_variant 0.32
rpoC 765883 c.2514C>G synonymous_variant 0.31
rpoC 765886 c.2517C>G synonymous_variant 0.3
rpoC 765892 c.2523T>C synonymous_variant 0.3
rpoC 765934 c.2565C>T synonymous_variant 0.25
rpoC 765967 c.2598C>T synonymous_variant 0.24
rpoC 765982 c.2613C>G synonymous_variant 0.23
rpoC 765994 c.2625A>T synonymous_variant 0.22
rpoC 766012 c.2643C>G synonymous_variant 0.21
rpoC 766021 c.2652G>C synonymous_variant 0.2
rpoC 766231 c.2862T>C synonymous_variant 1.0
rpoC 766381 c.3012C>T synonymous_variant 0.21
rpoC 766384 c.3015A>G synonymous_variant 0.22
rpoC 766393 c.3024C>G synonymous_variant 0.22
rpoC 766402 c.3033C>G synonymous_variant 0.23
rpoC 766408 c.3039C>T synonymous_variant 0.24
rpoC 766426 c.3057C>T synonymous_variant 0.24
rpoC 766456 c.3087C>G synonymous_variant 0.24
rpoC 766486 c.3117A>G synonymous_variant 0.25
rpoC 766492 c.3123T>C synonymous_variant 0.28
rpoC 766522 c.3153C>G synonymous_variant 0.3
rpoC 766528 c.3159T>C synonymous_variant 0.29
rpoC 766530 p.Arg1054Gln missense_variant 0.29
rpoC 766549 c.3180G>C synonymous_variant 0.3
rpoC 766573 c.3204T>C synonymous_variant 0.3
rpoC 766585 c.3216T>C synonymous_variant 0.31
rpoC 766594 c.3225G>C synonymous_variant 0.31
rpoC 766607 p.Ile1080Leu missense_variant 0.3
rpoC 766630 c.3261G>T synonymous_variant 0.3
rpoC 766660 c.3291G>A synonymous_variant 0.31
rpoC 766666 c.3297C>G synonymous_variant 0.3
rpoC 766672 c.3303T>C synonymous_variant 0.31
rpoC 766700 c.3331C>T synonymous_variant 0.34
rpoC 766726 c.3357T>C synonymous_variant 0.33
rpoC 766733 c.3364C>T synonymous_variant 0.32
rpoC 766738 c.3369G>C synonymous_variant 0.31
rpoC 766741 c.3372G>C synonymous_variant 0.32
rpoC 766750 c.3381C>G synonymous_variant 0.29
rpoC 766765 c.3396A>C synonymous_variant 0.31
rpoC 766774 c.3405T>C synonymous_variant 0.31
rpoC 766798 c.3429C>G synonymous_variant 0.29
rpoC 766801 c.3432C>G synonymous_variant 0.28
rpoC 766804 c.3435A>G synonymous_variant 0.29
rpoC 766843 c.3474T>G synonymous_variant 0.31
rpoC 766864 c.3495G>C synonymous_variant 0.29
rpoC 766876 c.3507C>T synonymous_variant 0.32
rpoC 766883 p.Ser1172Ala missense_variant 0.32
rpoC 766894 c.3525T>C synonymous_variant 0.32
rpoC 766895 c.3526T>C synonymous_variant 0.31
rpoC 766900 c.3531T>C synonymous_variant 0.3
rpoC 766903 c.3534C>T synonymous_variant 0.31
rpoC 766918 c.3549C>T synonymous_variant 0.29
rpoC 766933 c.3564A>G synonymous_variant 0.28
rpoC 766945 c.3576A>G synonymous_variant 0.28
rpoC 766963 c.3594T>C synonymous_variant 0.29
rpoC 766996 c.3627C>G synonymous_variant 0.3
rpoC 767002 c.3633G>C synonymous_variant 0.29
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.3
rpoC 767014 c.3645G>C synonymous_variant 0.29
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.3
rpoC 767059 c.3690T>G synonymous_variant 0.33
rpoC 767062 c.3693C>A synonymous_variant 0.34
rpoC 767098 c.3729T>C synonymous_variant 0.29
rpoC 767119 c.3750A>G synonymous_variant 0.3
rpoC 767134 c.3765C>A synonymous_variant 0.28
rpoC 767158 c.3789T>A synonymous_variant 0.25
rpoC 767167 c.3798C>G synonymous_variant 0.24
rpoC 767180 p.Ala1271Gln missense_variant 0.22
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781832 c.273T>G synonymous_variant 0.22
rpsL 781835 c.276T>C synonymous_variant 0.21
rpsL 781859 c.300T>G synonymous_variant 0.23
rpsL 781865 c.306G>C synonymous_variant 0.22
rpsL 781868 c.309T>C synonymous_variant 0.22
rpsL 781871 c.312G>C synonymous_variant 0.22
rpsL 781883 c.324G>A synonymous_variant 0.24
rpsL 781886 c.327C>T synonymous_variant 0.24
rpsL 781892 c.333A>G synonymous_variant 0.24
rpsL 781898 c.339A>T synonymous_variant 0.26
rpsL 781916 c.357T>C synonymous_variant 0.24
rpsL 781929 p.Gly124Ser missense_variant 0.24
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 0.25
rplC 800627 c.-182C>T upstream_gene_variant 0.19
rplC 800648 c.-161A>G upstream_gene_variant 0.2
rplC 800654 c.-155T>C upstream_gene_variant 0.2
rplC 800703 c.-106T>C upstream_gene_variant 0.19
rplC 800714 c.-95C>T upstream_gene_variant 0.19
rplC 801255 c.447C>A synonymous_variant 0.2
rplC 801285 c.477G>A synonymous_variant 0.21
rplC 801330 c.522G>T synonymous_variant 0.19
rplC 801333 c.525G>C synonymous_variant 0.19
fbiC 1302899 c.-32A>G upstream_gene_variant 1.0
fbiC 1303629 c.699C>T synonymous_variant 0.24
fbiC 1303632 c.702T>G synonymous_variant 0.24
fbiC 1303662 c.732C>G synonymous_variant 0.21
fbiC 1303674 c.744C>G synonymous_variant 0.22
fbiC 1303686 c.756C>G synonymous_variant 0.23
fbiC 1303704 c.774T>C synonymous_variant 0.21
fbiC 1303708 c.778T>C synonymous_variant 0.21
fbiC 1303746 c.816T>C synonymous_variant 0.19
fbiC 1303752 c.822A>G synonymous_variant 0.19
fbiC 1303755 c.825T>C synonymous_variant 0.2
fbiC 1304559 p.Glu543Asp missense_variant 0.22
fbiC 1304574 c.1644C>G synonymous_variant 0.22
fbiC 1304610 c.1680C>G synonymous_variant 0.23
fbiC 1304613 c.1683T>A synonymous_variant 0.23
fbiC 1304625 c.1695C>T synonymous_variant 0.21
fbiC 1304640 c.1710A>C synonymous_variant 0.21
fbiC 1304742 c.1812T>G synonymous_variant 0.2
fbiC 1304757 c.1827A>G synonymous_variant 0.2
fbiC 1304778 c.1848T>C synonymous_variant 0.22
fbiC 1304784 c.1854T>G synonymous_variant 0.22
fbiC 1304787 c.1857T>C synonymous_variant 0.22
fbiC 1304797 p.Ala623Thr missense_variant 0.22
fbiC 1304811 c.1881C>G synonymous_variant 0.22
fbiC 1304817 c.1887T>C synonymous_variant 0.26
fbiC 1304823 c.1893C>T synonymous_variant 0.25
fbiC 1304832 c.1902C>G synonymous_variant 0.25
fbiC 1304853 c.1923C>G synonymous_variant 0.23
fbiC 1304856 c.1926C>G synonymous_variant 0.21
fbiC 1304868 c.1938G>C synonymous_variant 0.2
fbiC 1304872 c.1942_1943delAGinsTC synonymous_variant 0.2
fbiC 1304875 p.Ile649Val missense_variant 0.2
fbiC 1304893 p.Gly655Ser missense_variant 0.22
fbiC 1304915 p.Asp662Gly missense_variant 0.23
fbiC 1304928 c.1998T>C synonymous_variant 0.22
fbiC 1304934 c.2004C>G synonymous_variant 0.23
fbiC 1304937 c.2007G>C synonymous_variant 0.23
fbiC 1304946 c.2016G>C synonymous_variant 0.24
fbiC 1304955 c.2025G>A synonymous_variant 0.22
fbiC 1304958 c.2028T>G synonymous_variant 0.22
Rv1258c 1406685 p.Val219Ala missense_variant 1.0
embR 1416633 p.Leu239Val missense_variant 1.0
atpE 1461251 c.207G>T synonymous_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.2
rrs 1472040 n.195T>C non_coding_transcript_exon_variant 0.21
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.22
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.23
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.22
rrs 1472463 n.618G>C non_coding_transcript_exon_variant 0.22
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.22
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.26
rrs 1472686 n.841G>A non_coding_transcript_exon_variant 0.22
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.2
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.19
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.24
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.2
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.2
rrl 1473797 n.140G>T non_coding_transcript_exon_variant 0.19
rrl 1473831 n.174G>A non_coding_transcript_exon_variant 0.19
rrl 1473899 n.242A>T non_coding_transcript_exon_variant 0.2
rrl 1473918 n.261C>T non_coding_transcript_exon_variant 0.22
rrl 1473994 n.337C>T non_coding_transcript_exon_variant 0.24
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.24
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.24
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.24
rrl 1474011 n.354G>A non_coding_transcript_exon_variant 0.23
rrl 1474018 n.361G>A non_coding_transcript_exon_variant 0.25
rrl 1474030 n.373G>A non_coding_transcript_exon_variant 0.26
rrl 1474061 n.404T>C non_coding_transcript_exon_variant 0.28
rrl 1474089 n.432C>T non_coding_transcript_exon_variant 0.24
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.25
rrl 1474100 n.443C>T non_coding_transcript_exon_variant 0.26
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.24
rrl 1474110 n.453A>C non_coding_transcript_exon_variant 0.23
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 0.24
rrl 1474130 n.473C>T non_coding_transcript_exon_variant 0.28
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.28
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.28
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.29
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.29
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.24
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.24
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.3
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.31
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.3
rrl 1474717 n.1060A>T non_coding_transcript_exon_variant 0.33
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.31
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.31
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 0.3
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.3
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.29
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.25
rrl 1474945 n.1288C>T non_coding_transcript_exon_variant 0.27
rrl 1474952 n.1296_1300delCATCC non_coding_transcript_exon_variant 0.27
rrl 1474961 n.1304T>G non_coding_transcript_exon_variant 0.27
rrl 1474962 n.1305T>C non_coding_transcript_exon_variant 0.26
rrl 1474963 n.1306G>A non_coding_transcript_exon_variant 0.26
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.26
rrl 1474967 n.1311_1315delGGGTG non_coding_transcript_exon_variant 0.3
rrl 1474991 n.1334T>C non_coding_transcript_exon_variant 0.3
rrl 1474995 n.1338T>G non_coding_transcript_exon_variant 0.31
rrl 1475005 n.1348C>T non_coding_transcript_exon_variant 0.33
rrl 1475006 n.1349A>G non_coding_transcript_exon_variant 0.33
rrl 1475007 n.1350C>T non_coding_transcript_exon_variant 0.33
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.34
rrl 1475018 n.1361G>A non_coding_transcript_exon_variant 0.32
rrl 1475027 n.1370G>T non_coding_transcript_exon_variant 0.34
rrl 1475028 n.1371G>T non_coding_transcript_exon_variant 0.34
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.33
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.2
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.27
rrl 1475401 n.1745delC non_coding_transcript_exon_variant 0.24
rrl 1475404 n.1747A>G non_coding_transcript_exon_variant 0.24
rrl 1475405 n.1748A>T non_coding_transcript_exon_variant 0.24
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.25
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.27
rrl 1475453 n.1796T>A non_coding_transcript_exon_variant 0.26
rrl 1475480 n.1823A>G non_coding_transcript_exon_variant 0.26
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.24
rrl 1475487 n.1830C>T non_coding_transcript_exon_variant 0.23
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.22
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.21
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.27
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 0.27
rrl 1475605 n.1948A>T non_coding_transcript_exon_variant 0.27
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.27
rrl 1475617 n.1960C>G non_coding_transcript_exon_variant 0.27
rrl 1475625 n.1968G>C non_coding_transcript_exon_variant 0.3
rrl 1475637 n.1980T>A non_coding_transcript_exon_variant 0.32
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.33
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.33
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.33
rrl 1475760 n.2103C>T non_coding_transcript_exon_variant 0.3
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.31
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.23
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.23
rrl 1475999 n.2342G>T non_coding_transcript_exon_variant 0.27
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.3
rrl 1476032 n.2375C>T non_coding_transcript_exon_variant 0.28
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.29
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.3
rrl 1476045 n.2388G>C non_coding_transcript_exon_variant 0.26
rrl 1476047 n.2390G>A non_coding_transcript_exon_variant 0.26
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.26
rrl 1476077 n.2420T>C non_coding_transcript_exon_variant 0.27
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.28
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.26
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.25
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.26
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.28
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.29
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 0.33
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 0.37
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.31
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.28
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.27
inhA 1674434 p.Val78Ala missense_variant 0.96
inhA 1674729 c.528G>A synonymous_variant 0.19
inhA 1674745 p.Tyr182Asp missense_variant 0.2
inhA 1674756 c.555T>C synonymous_variant 0.2
inhA 1674765 c.564C>T synonymous_variant 0.22
inhA 1674774 c.573A>C synonymous_variant 0.22
inhA 1674777 c.576C>A synonymous_variant 0.22
inhA 1674780 c.579T>G synonymous_variant 0.22
inhA 1674792 c.591G>C synonymous_variant 0.22
inhA 1674801 c.600T>C synonymous_variant 0.25
inhA 1674820 c.619_621delCTCinsTTG synonymous_variant 0.26
inhA 1674828 c.627G>A synonymous_variant 0.26
inhA 1674846 p.Ile215Met missense_variant 0.24
inhA 1674870 c.669T>C synonymous_variant 0.25
inhA 1674876 c.675C>G synonymous_variant 0.25
inhA 1674879 c.678T>C synonymous_variant 0.24
inhA 1674888 c.687C>T synonymous_variant 0.23
rpsA 1833589 c.48A>T synonymous_variant 0.21
rpsA 1833595 c.54T>C synonymous_variant 0.21
rpsA 1833613 c.72C>A synonymous_variant 0.23
rpsA 1833619 c.78A>C synonymous_variant 0.23
rpsA 1833661 c.120A>G synonymous_variant 0.25
rpsA 1833667 c.126C>G synonymous_variant 0.25
rpsA 1833703 c.162C>T synonymous_variant 0.25
rpsA 1833724 c.183C>G synonymous_variant 0.24
rpsA 1833727 c.186G>C synonymous_variant 0.24
rpsA 1833745 c.204G>C synonymous_variant 0.26
rpsA 1833760 c.219C>T synonymous_variant 0.26
rpsA 1833790 c.249T>C synonymous_variant 0.25
rpsA 1833793 c.252C>T synonymous_variant 0.25
rpsA 1833802 c.261A>G synonymous_variant 0.25
rpsA 1833808 c.267G>C synonymous_variant 0.24
rpsA 1833811 c.270G>T synonymous_variant 0.24
rpsA 1833832 c.291G>A synonymous_variant 0.25
rpsA 1833838 c.297G>C synonymous_variant 0.24
rpsA 1833841 c.300C>G synonymous_variant 0.25
rpsA 1833847 c.306C>G synonymous_variant 0.31
rpsA 1833856 c.315A>G synonymous_variant 0.3
rpsA 1833859 c.318C>T synonymous_variant 0.28
rpsA 1833874 c.333T>C synonymous_variant 0.3
rpsA 1833895 c.354G>C synonymous_variant 0.27
rpsA 1833928 c.387G>C synonymous_variant 0.26
rpsA 1833949 c.408T>C synonymous_variant 0.25
rpsA 1833970 c.429G>A synonymous_variant 0.24
rpsA 1833979 c.438T>C synonymous_variant 0.25
rpsA 1834000 c.459G>C synonymous_variant 0.27
rpsA 1834015 c.474G>C synonymous_variant 0.26
rpsA 1834021 c.480C>T synonymous_variant 0.26
rpsA 1834102 c.561T>C synonymous_variant 0.26
rpsA 1834105 c.564C>T synonymous_variant 0.26
rpsA 1834150 c.609G>C synonymous_variant 0.26
rpsA 1834153 c.612T>C synonymous_variant 0.25
rpsA 1834154 p.Asn205Gln missense_variant 0.25
rpsA 1834157 c.616T>C synonymous_variant 0.25
rpsA 1834162 c.621A>G synonymous_variant 0.26
rpsA 1834165 c.624A>G synonymous_variant 0.25
rpsA 1834177 c.636A>C synonymous_variant 0.27
rpsA 1834186 c.645C>G synonymous_variant 0.29
rpsA 1834189 c.648G>C synonymous_variant 0.28
rpsA 1834195 c.654G>C synonymous_variant 0.29
rpsA 1834222 c.681T>C synonymous_variant 0.28
rpsA 1834225 c.684C>G synonymous_variant 0.28
rpsA 1834231 c.690T>G synonymous_variant 0.3
rpsA 1834249 c.708T>C synonymous_variant 0.26
rpsA 1834261 c.720A>G synonymous_variant 0.27
rpsA 1834264 c.723G>C synonymous_variant 0.26
rpsA 1834297 c.756C>T synonymous_variant 0.26
rpsA 1834303 c.762T>G synonymous_variant 0.26
rpsA 1834306 c.765T>C synonymous_variant 0.25
rpsA 1834336 c.795C>G synonymous_variant 0.29
rpsA 1834348 c.807T>C synonymous_variant 0.29
rpsA 1834357 c.816T>C synonymous_variant 0.28
rpsA 1834366 c.825A>G synonymous_variant 0.28
rpsA 1834375 c.834G>A synonymous_variant 0.28
rpsA 1834396 c.855G>T synonymous_variant 0.31
rpsA 1834411 c.870T>C synonymous_variant 0.31
rpsA 1834423 c.882G>T synonymous_variant 0.31
rpsA 1834451 c.910T>C synonymous_variant 0.3
rpsA 1834456 c.915T>G synonymous_variant 0.29
rpsA 1834465 c.924T>C synonymous_variant 0.29
rpsA 1834468 c.927A>G synonymous_variant 0.28
rpsA 1834477 c.936C>T synonymous_variant 0.29
rpsA 1834489 c.948T>C synonymous_variant 0.28
rpsA 1834519 c.978G>C synonymous_variant 0.33
rpsA 1834546 c.1005T>C synonymous_variant 0.32
rpsA 1834555 c.1014T>G synonymous_variant 0.31
rpsA 1834603 c.1062G>A synonymous_variant 0.29
rpsA 1834609 c.1068T>C synonymous_variant 0.28
rpsA 1834612 c.1071G>A synonymous_variant 0.29
rpsA 1834633 c.1092A>G synonymous_variant 0.24
rpsA 1834639 c.1098T>C synonymous_variant 0.24
rpsA 1834654 c.1113G>A synonymous_variant 0.24
rpsA 1834690 c.1149T>C synonymous_variant 0.22
rpsA 1834699 p.Glu386Asp missense_variant 0.2
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154286 p.Met609Thr missense_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155503 c.609C>T synonymous_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517962 c.-153C>G upstream_gene_variant 0.21
kasA 2517965 c.-150C>T upstream_gene_variant 0.19
kasA 2518132 c.18C>T synonymous_variant 0.99
kasA 2518561 c.447T>C synonymous_variant 0.26
kasA 2518567 c.453G>C synonymous_variant 0.26
kasA 2518570 c.456G>C synonymous_variant 0.27
kasA 2518573 c.459G>C synonymous_variant 0.27
kasA 2518574 p.Ile154Val missense_variant 0.27
kasA 2518582 c.468G>C synonymous_variant 0.28
kasA 2518583 p.Gln157Glu missense_variant 0.28
kasA 2518594 c.480C>T synonymous_variant 0.32
kasA 2518597 c.483C>G synonymous_variant 0.33
kasA 2518606 c.492G>C synonymous_variant 0.36
kasA 2518609 p.Met165Ile missense_variant 0.36
kasA 2518636 c.522C>A synonymous_variant 0.4
kasA 2518639 c.525G>C synonymous_variant 0.39
kasA 2518642 c.528A>G synonymous_variant 0.4
kasA 2518645 c.531G>C synonymous_variant 0.41
kasA 2518651 c.537C>G synonymous_variant 0.41
kasA 2518657 c.543G>C synonymous_variant 0.43
kasA 2518663 c.549T>C synonymous_variant 0.44
kasA 2518672 c.558G>C synonymous_variant 0.43
kasA 2518678 c.564C>T synonymous_variant 0.42
kasA 2518681 c.567C>T synonymous_variant 0.39
kasA 2518684 c.570C>G synonymous_variant 0.38
kasA 2518687 p.Asp191Glu missense_variant 0.36
kasA 2518693 c.579C>G synonymous_variant 0.37
kasA 2518702 c.588C>T synonymous_variant 0.37
kasA 2518711 c.597A>G synonymous_variant 0.36
kasA 2518714 c.600A>C synonymous_variant 0.35
kasA 2518717 c.603C>G synonymous_variant 0.35
kasA 2518723 c.609G>A synonymous_variant 0.35
kasA 2518735 c.621C>T synonymous_variant 0.34
kasA 2518747 c.633C>G synonymous_variant 0.32
kasA 2518768 c.654C>G synonymous_variant 0.3
kasA 2518783 c.669T>C synonymous_variant 0.29
kasA 2518789 c.675G>C synonymous_variant 0.27
kasA 2518795 c.681C>A synonymous_variant 0.24
kasA 2518798 c.684G>C synonymous_variant 0.24
Rv2752c 3066384 c.-193G>A upstream_gene_variant 0.25
Rv2752c 3066387 c.-196G>A upstream_gene_variant 0.27
thyA 3073854 c.618C>T synonymous_variant 0.19
thyA 3073889 p.Ser195Ala missense_variant 0.2
thyA 3073905 c.567C>G synonymous_variant 0.21
thyA 3073925 c.547T>C synonymous_variant 0.22
ald 3086728 c.-92C>T upstream_gene_variant 1.0
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087084 c.266delA frameshift_variant 0.99
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3475159 p.Asn385Asp missense_variant 1.0
Rv3236c 3612143 p.Arg325His missense_variant 1.0
rpoA 3877557 c.951C>G synonymous_variant 0.2
rpoA 3877587 c.921A>C synonymous_variant 0.27
rpoA 3877613 p.Ile299Val missense_variant 0.29
rpoA 3877617 c.891G>C synonymous_variant 0.28
rpoA 3877638 c.870T>G synonymous_variant 0.3
rpoA 3877656 c.852T>C synonymous_variant 0.3
rpoA 3877677 p.Ala277Ser missense_variant 0.31
rpoA 3877680 c.828G>C synonymous_variant 0.31
rpoA 3877685 c.823C>T synonymous_variant 0.31
rpoA 3877686 c.822A>G synonymous_variant 0.31
rpoA 3877692 c.816G>C synonymous_variant 0.32
rpoA 3877704 c.804G>T synonymous_variant 0.34
rpoA 3877737 c.771G>C synonymous_variant 0.38
rpoA 3877743 c.765T>C synonymous_variant 0.38
rpoA 3877758 c.750G>C synonymous_variant 0.39
rpoA 3877764 c.744C>G synonymous_variant 0.39
rpoA 3877770 c.738A>G synonymous_variant 0.4
rpoA 3877776 c.732T>C synonymous_variant 0.41
rpoA 3877782 c.726T>C synonymous_variant 0.39
rpoA 3877815 c.693C>T synonymous_variant 0.39
rpoA 3877830 c.678C>T synonymous_variant 0.36
rpoA 3877839 c.669G>C synonymous_variant 0.34
rpoA 3877851 c.657C>T synonymous_variant 0.36
rpoA 3877857 c.651G>A synonymous_variant 0.37
rpoA 3877865 c.643C>T synonymous_variant 0.37
rpoA 3877866 c.642G>C synonymous_variant 0.37
rpoA 3877872 c.636C>T synonymous_variant 0.38
rpoA 3877875 c.633T>C synonymous_variant 0.38
rpoA 3877887 c.621G>C synonymous_variant 0.42
rpoA 3877900 p.Ser203Thr missense_variant 0.4
rpoA 3877905 c.603A>G synonymous_variant 0.4
rpoA 3877908 p.Asn200Ser missense_variant 0.4
rpoA 3877920 c.588G>C synonymous_variant 0.42
rpoA 3877962 c.546G>T synonymous_variant 0.44
rpoA 3877968 c.540C>G synonymous_variant 0.41
rpoA 3877989 c.519A>G synonymous_variant 0.39
rpoA 3878001 c.507A>G synonymous_variant 0.37
rpoA 3878022 c.486T>C synonymous_variant 0.35
rpoA 3878025 c.483C>T synonymous_variant 0.35
rpoA 3878028 c.480G>C synonymous_variant 0.35
rpoA 3878031 c.477T>C synonymous_variant 0.35
rpoA 3878043 c.465G>C synonymous_variant 0.36
rpoA 3878046 c.462T>G synonymous_variant 0.35
rpoA 3878055 c.453A>G synonymous_variant 0.34
rpoA 3878061 c.447G>C synonymous_variant 0.33
rpoA 3878067 c.441C>G synonymous_variant 0.33
rpoA 3878070 c.438T>C synonymous_variant 0.33
rpoA 3878082 c.426T>C synonymous_variant 0.34
rpoA 3878097 c.411G>A synonymous_variant 0.35
rpoA 3878103 c.405A>G synonymous_variant 0.35
rpoA 3878106 c.402G>C synonymous_variant 0.33
rpoA 3878118 c.390T>C synonymous_variant 0.34
rpoA 3878130 c.378C>G synonymous_variant 0.34
rpoA 3878145 c.363C>G synonymous_variant 0.31
rpoA 3878157 c.351C>G synonymous_variant 0.28
rpoA 3878166 c.342C>G synonymous_variant 0.3
rpoA 3878169 c.339G>C synonymous_variant 0.3
rpoA 3878184 c.324C>T synonymous_variant 0.3
rpoA 3878187 c.321C>G synonymous_variant 0.31
rpoA 3878193 c.315T>C synonymous_variant 0.31
rpoA 3878205 c.303T>G synonymous_variant 0.31
rpoA 3878217 c.291A>G synonymous_variant 0.3
rpoA 3878229 c.279C>G synonymous_variant 0.3
rpoA 3878247 c.261G>C synonymous_variant 0.33
rpoA 3878256 c.252G>C synonymous_variant 0.36
rpoA 3878264 p.Ser82Gly missense_variant 0.37
rpoA 3878271 c.237T>C synonymous_variant 0.37
rpoA 3878283 p.Glu75Asp missense_variant 0.35
rpoA 3878295 c.213A>G synonymous_variant 0.36
rpoA 3878298 c.210A>G synonymous_variant 0.37
rpoA 3878304 c.204G>C synonymous_variant 0.37
rpoA 3878313 c.195G>C synonymous_variant 0.36
rpoA 3878322 c.186A>G synonymous_variant 0.35
rpoA 3878331 c.177A>C synonymous_variant 0.34
rpoA 3878334 c.174T>C synonymous_variant 0.34
rpoA 3878337 c.171T>C synonymous_variant 0.34
rpoA 3878346 c.162T>C synonymous_variant 0.37
rpoA 3878364 c.144A>C synonymous_variant 0.38
rpoA 3878370 c.138T>C synonymous_variant 0.37
rpoA 3878376 c.132G>C synonymous_variant 0.4
rpoA 3878384 c.124C>T synonymous_variant 0.39
rpoA 3878385 c.123C>G synonymous_variant 0.38
rpoA 3878391 c.117T>G synonymous_variant 0.38
rpoA 3878415 c.93C>T synonymous_variant 0.38
rpoA 3878418 c.90C>T synonymous_variant 0.36
rpoA 3878442 c.66G>C synonymous_variant 0.38
rpoA 3878454 c.54A>G synonymous_variant 0.36
rpoA 3878458 p.Asn17Ser missense_variant 0.35
rpoA 3878471 p.Val13Leu missense_variant 0.35
rpoA 3878472 p.Asp12Glu missense_variant 0.35
rpoA 3878484 c.24C>A synonymous_variant 0.26
rpoA 3878490 c.18C>A synonymous_variant 0.29
rpoA 3878496 c.12A>T synonymous_variant 0.33
clpC1 4038596 c.2109A>G synonymous_variant 0.2
clpC1 4038704 c.2001T>C synonymous_variant 0.21
clpC1 4038713 c.1992T>C synonymous_variant 0.23
clpC1 4038740 c.1965G>C synonymous_variant 0.29
clpC1 4038749 c.1956C>T synonymous_variant 0.28
clpC1 4038773 c.1932T>C synonymous_variant 0.31
clpC1 4038782 c.1923G>T synonymous_variant 0.31
clpC1 4038790 c.1915C>T synonymous_variant 0.32
clpC1 4038809 c.1896G>A synonymous_variant 0.33
clpC1 4038812 c.1893T>C synonymous_variant 0.33
clpC1 4038875 c.1830C>G synonymous_variant 0.38
clpC1 4038878 c.1827A>G synonymous_variant 0.39
clpC1 4038893 c.1812C>T synonymous_variant 0.39
clpC1 4038902 c.1803C>T synonymous_variant 0.38
clpC1 4038908 c.1797C>G synonymous_variant 0.37
clpC1 4038914 c.1791G>C synonymous_variant 0.38
clpC1 4038923 c.1782A>G synonymous_variant 0.38
clpC1 4038953 c.1752A>G synonymous_variant 0.39
clpC1 4038956 c.1749T>C synonymous_variant 0.38
clpC1 4038965 c.1740T>C synonymous_variant 0.38
clpC1 4038971 c.1734T>C synonymous_variant 0.36
clpC1 4038974 c.1731T>C synonymous_variant 0.35
clpC1 4038989 c.1716T>C synonymous_variant 0.37
clpC1 4038997 c.1708T>C synonymous_variant 0.37
clpC1 4039004 c.1701C>G synonymous_variant 0.37
clpC1 4039022 c.1683A>G synonymous_variant 0.38
clpC1 4039025 c.1680C>G synonymous_variant 0.38
clpC1 4039067 c.1638G>C synonymous_variant 0.34
clpC1 4039085 c.1620A>G synonymous_variant 0.35
clpC1 4039097 c.1608G>C synonymous_variant 0.33
clpC1 4039106 c.1599G>T synonymous_variant 0.32
clpC1 4039112 c.1593C>A synonymous_variant 0.32
clpC1 4039119 c.1585_1586delTCinsAG synonymous_variant 0.3
clpC1 4039121 c.1584T>C synonymous_variant 0.3
clpC1 4039124 c.1581C>G synonymous_variant 0.31
clpC1 4039142 c.1563A>G synonymous_variant 0.31
clpC1 4039145 c.1560G>C synonymous_variant 0.32
clpC1 4039169 p.Glu512Asp missense_variant 0.31
clpC1 4039172 c.1533A>G synonymous_variant 0.3
clpC1 4039178 c.1527G>C synonymous_variant 0.3
clpC1 4039183 c.1522T>C synonymous_variant 0.3
clpC1 4039190 c.1515C>G synonymous_variant 0.3
clpC1 4039193 c.1512C>G synonymous_variant 0.3
clpC1 4039223 c.1482C>T synonymous_variant 0.3
clpC1 4039226 c.1479T>C synonymous_variant 0.31
clpC1 4039238 c.1467C>T synonymous_variant 0.3
clpC1 4039243 c.1462C>T synonymous_variant 0.28
clpC1 4039259 c.1446G>A synonymous_variant 0.27
clpC1 4039262 c.1443C>T synonymous_variant 0.26
clpC1 4039268 c.1437C>T synonymous_variant 0.26
clpC1 4039274 c.1431G>C synonymous_variant 0.25
clpC1 4039286 c.1419T>C synonymous_variant 0.26
clpC1 4039298 c.1407T>C synonymous_variant 0.27
clpC1 4039304 c.1401G>A synonymous_variant 0.27
clpC1 4039313 c.1392C>T synonymous_variant 0.28
clpC1 4039319 p.Ala462Thr missense_variant 0.26
clpC1 4039322 c.1383T>C synonymous_variant 0.26
clpC1 4039328 c.1377A>C synonymous_variant 0.26
clpC1 4039338 p.Thr456Gln missense_variant 0.25
clpC1 4039361 c.1344C>A synonymous_variant 0.24
clpC1 4039382 c.1323C>T synonymous_variant 0.25
clpC1 4039391 c.1314T>G synonymous_variant 0.23
clpC1 4039409 c.1296T>C synonymous_variant 0.24
clpC1 4039412 c.1293T>A synonymous_variant 0.24
clpC1 4039415 p.Glu430Asp missense_variant 0.24
clpC1 4039430 c.1275T>C synonymous_variant 0.24
clpC1 4039442 c.1263A>G synonymous_variant 0.25
clpC1 4039454 c.1251A>G synonymous_variant 0.26
clpC1 4039463 c.1242C>G synonymous_variant 0.26
clpC1 4039466 c.1239T>C synonymous_variant 0.25
clpC1 4039469 c.1236T>C synonymous_variant 0.25
clpC1 4039472 c.1233G>C synonymous_variant 0.26
clpC1 4039481 c.1224T>G synonymous_variant 0.27
clpC1 4039484 c.1221T>G synonymous_variant 0.28
clpC1 4039508 c.1197G>C synonymous_variant 0.3
clpC1 4039526 c.1179G>A synonymous_variant 0.31
clpC1 4039532 c.1173C>T synonymous_variant 0.33
clpC1 4039553 c.1152C>A synonymous_variant 0.32
clpC1 4039562 c.1143C>G synonymous_variant 0.32
clpC1 4039565 c.1140G>C synonymous_variant 0.33
clpC1 4039576 p.Ala377Ser missense_variant 0.33
clpC1 4039577 c.1128T>C synonymous_variant 0.33
clpC1 4039583 c.1122C>T synonymous_variant 0.36
clpC1 4039622 c.1083C>T synonymous_variant 0.35
clpC1 4039664 c.1041G>T synonymous_variant 0.33
clpC1 4039670 c.1035G>C synonymous_variant 0.33
clpC1 4039694 c.1011G>C synonymous_variant 0.32
clpC1 4039724 c.981A>G synonymous_variant 0.31
clpC1 4039733 c.972G>C synonymous_variant 0.31
clpC1 4039739 c.966C>G synonymous_variant 0.29
clpC1 4039742 c.963C>T synonymous_variant 0.29
clpC1 4039748 c.957G>A synonymous_variant 0.28
clpC1 4039751 c.954A>G synonymous_variant 0.28
clpC1 4039766 c.939T>C synonymous_variant 0.27
clpC1 4039769 c.936C>G synonymous_variant 0.28
clpC1 4039775 c.930G>C synonymous_variant 0.27
clpC1 4039778 c.927A>G synonymous_variant 0.27
clpC1 4039781 c.924G>C synonymous_variant 0.27
clpC1 4039787 c.916_918delTCGinsAGC synonymous_variant 0.27
clpC1 4039796 c.909C>T synonymous_variant 0.28
clpC1 4039805 c.900C>G synonymous_variant 0.29
clpC1 4039817 c.888A>T synonymous_variant 0.27
clpC1 4039820 c.885T>C synonymous_variant 0.27
clpC1 4039826 c.879C>G synonymous_variant 0.29
clpC1 4039831 c.874T>C synonymous_variant 0.29
clpC1 4039850 c.855T>C synonymous_variant 0.27
clpC1 4039865 c.840T>C synonymous_variant 0.25
clpC1 4039898 c.807C>G synonymous_variant 0.26
clpC1 4039931 c.774T>C synonymous_variant 0.22
clpC1 4039937 c.768G>C synonymous_variant 0.21
clpC1 4039943 c.762G>C synonymous_variant 0.2
clpC1 4039964 c.741C>T synonymous_variant 0.2
clpC1 4040000 c.705C>T synonymous_variant 0.18
clpC1 4040015 c.690G>A synonymous_variant 0.2
clpC1 4040021 c.684A>C synonymous_variant 0.19
clpC1 4040033 c.672G>C synonymous_variant 0.21
clpC1 4040090 p.Ser205Thr missense_variant 0.2
clpC1 4040105 c.600C>G synonymous_variant 0.27
clpC1 4040147 c.558A>G synonymous_variant 0.31
clpC1 4040162 c.543G>C synonymous_variant 0.31
clpC1 4040165 c.540G>C synonymous_variant 0.32
clpC1 4040171 c.534C>G synonymous_variant 0.33
clpC1 4040195 c.510G>T synonymous_variant 0.32
clpC1 4040200 c.505T>C synonymous_variant 0.32
clpC1 4040201 c.504C>G synonymous_variant 0.32
clpC1 4040204 c.501G>C synonymous_variant 0.32
clpC1 4040207 c.498T>C synonymous_variant 0.32
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 0.34
clpC1 4040225 c.480A>C synonymous_variant 0.34
clpC1 4040228 c.477G>C synonymous_variant 0.35
clpC1 4040231 c.474C>T synonymous_variant 0.36
clpC1 4040246 c.459C>G synonymous_variant 0.38
clpC1 4040249 c.456A>G synonymous_variant 0.39
clpC1 4040267 c.438A>G synonymous_variant 0.42
clpC1 4040273 c.432T>C synonymous_variant 0.41
clpC1 4040291 c.414G>C synonymous_variant 0.44
clpC1 4040309 c.396C>T synonymous_variant 0.44
clpC1 4040342 c.363C>G synonymous_variant 0.43
clpC1 4040348 c.357G>C synonymous_variant 0.42
clpC1 4040354 c.351A>G synonymous_variant 0.39
clpC1 4040357 c.348T>C synonymous_variant 0.41
clpC1 4040363 c.342A>C synonymous_variant 0.39
clpC1 4040369 c.336C>G synonymous_variant 0.38
clpC1 4040375 c.330G>C synonymous_variant 0.35
clpC1 4040380 c.325T>C synonymous_variant 0.36
clpC1 4040387 c.318A>G synonymous_variant 0.33
clpC1 4040393 c.312G>C synonymous_variant 0.31
clpC1 4040411 c.294T>C synonymous_variant 0.3
clpC1 4040419 c.286C>T synonymous_variant 0.29
clpC1 4040423 c.282A>G synonymous_variant 0.29
clpC1 4040426 c.279T>C synonymous_variant 0.29
clpC1 4040431 c.274T>C synonymous_variant 0.3
clpC1 4040450 c.255A>G synonymous_variant 0.3
clpC1 4040456 c.249C>T synonymous_variant 0.32
clpC1 4040459 c.246C>G synonymous_variant 0.31
clpC1 4040462 c.243C>T synonymous_variant 0.29
clpC1 4040465 c.240T>C synonymous_variant 0.3
clpC1 4040471 c.234T>C synonymous_variant 0.32
clpC1 4040480 c.225T>C synonymous_variant 0.34
clpC1 4040486 c.219G>C synonymous_variant 0.34
clpC1 4040495 c.210C>A synonymous_variant 0.34
clpC1 4040522 c.183T>C synonymous_variant 0.33
clpC1 4040525 c.180C>T synonymous_variant 0.34
clpC1 4040528 c.177G>C synonymous_variant 0.33
clpC1 4040531 c.174T>C synonymous_variant 0.33
clpC1 4040534 c.171A>G synonymous_variant 0.34
clpC1 4040537 c.168G>C synonymous_variant 0.33
clpC1 4040551 c.154T>C synonymous_variant 0.33
clpC1 4040561 c.144A>G synonymous_variant 0.32
clpC1 4040573 c.132T>A synonymous_variant 0.31
clpC1 4040579 c.126A>G synonymous_variant 0.3
clpC1 4040582 c.123G>C synonymous_variant 0.3
clpC1 4040588 c.117T>C synonymous_variant 0.29
clpC1 4040591 c.114C>T synonymous_variant 0.29
clpC1 4040597 c.108C>T synonymous_variant 0.29
clpC1 4040600 c.103_105delTTAinsCTG synonymous_variant 0.28
clpC1 4040603 c.102T>G synonymous_variant 0.28
clpC1 4040606 c.99T>C synonymous_variant 0.29
embC 4240671 p.Thr270Ile missense_variant 0.99
embC 4241452 c.1590G>C synonymous_variant 0.2
embC 4241455 c.1593C>T synonymous_variant 0.2
embC 4241461 c.1599C>G synonymous_variant 0.19
embC 4241623 c.1761C>G synonymous_variant 0.17
embC 4241843 p.Leu661Ile missense_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243570 p.Thr113Arg missense_variant 1.0
embA 4244220 c.988C>T synonymous_variant 1.0
embA 4244379 p.Pro383Ser missense_variant 1.0
embA 4245078 p.Trp616Gly missense_variant 0.21
embA 4245083 c.1851A>C synonymous_variant 0.21
embA 4245089 c.1857G>C synonymous_variant 0.22
embA 4245093 p.Ile621Val missense_variant 0.22
embA 4245125 c.1893G>C synonymous_variant 0.23
embA 4245137 c.1905T>C synonymous_variant 0.23
embA 4245149 c.1917C>G synonymous_variant 0.24
embA 4245183 c.1951C>T synonymous_variant 0.21
embA 4245186 p.Thr652Ala missense_variant 0.21
embA 4245189 c.1957C>T synonymous_variant 0.21
embA 4245223 p.Tyr664Phe missense_variant 0.2
embB 4246864 c.351C>T synonymous_variant 1.0
embB 4247470 c.957T>C synonymous_variant 0.22
embB 4247497 c.984T>C synonymous_variant 0.22
embB 4247500 c.987C>G synonymous_variant 0.21
embB 4247506 c.993C>G synonymous_variant 0.21
embB 4247512 c.999T>C synonymous_variant 0.22
embB 4247527 c.1014G>C synonymous_variant 0.23
embB 4247539 c.1026T>C synonymous_variant 0.25
embB 4247550 p.Ala346Asp missense_variant 0.26
embB 4247554 c.1041T>C synonymous_variant 0.27
embB 4247566 c.1053C>G synonymous_variant 0.28
embB 4247572 c.1059A>C synonymous_variant 0.27
embB 4247590 c.1077A>G synonymous_variant 0.28
embB 4247629 c.1116C>G synonymous_variant 0.25
embB 4247632 c.1119C>G synonymous_variant 0.22
embB 4247638 c.1125G>C synonymous_variant 0.21
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4248070 c.1557T>C synonymous_variant 0.2
embB 4248085 c.1572T>C synonymous_variant 0.24
embB 4248097 c.1584C>G synonymous_variant 0.27
embB 4248118 c.1605T>G synonymous_variant 0.27
embB 4248127 c.1614G>C synonymous_variant 0.26
embB 4248130 c.1617G>C synonymous_variant 0.26
embB 4248133 c.1620C>A synonymous_variant 0.26
embB 4248139 c.1626C>G synonymous_variant 0.27
embB 4248142 c.1629T>C synonymous_variant 0.26
embB 4248143 c.1630T>C synonymous_variant 0.26
embB 4248146 p.Ile545Leu missense_variant 0.26
embB 4248149 p.Thr546Ser missense_variant 0.26
embB 4248157 c.1644A>G synonymous_variant 0.27
embB 4248161 c.1648C>T synonymous_variant 0.27
embB 4248169 c.1656C>A synonymous_variant 0.29
embB 4248190 c.1677G>C synonymous_variant 0.26
embB 4248200 p.Ile563Val missense_variant 0.25
embB 4248206 p.Ser565Gly missense_variant 0.25
embB 4248211 c.1698G>A synonymous_variant 0.25
embB 4248220 c.1707A>C synonymous_variant 0.25
embB 4248241 c.1728C>T synonymous_variant 0.25
embB 4248277 c.1764G>C synonymous_variant 0.21
embB 4248631 c.2118G>A synonymous_variant 1.0
aftB 4269351 c.-515C>T upstream_gene_variant 0.92
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269522 c.-686C>T upstream_gene_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
ethA 4326465 p.Ile337Val missense_variant 0.99
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4408034 p.Glu57Lys missense_variant 1.0