EBG00000313339 - n.1745delC
Drug resistance types
4 Sensitive
0 RR-TB
37 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| 27 | |
| lineage4.9 | 7 |
| lineage4 | 4 |
| La2 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage3 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1 | 5 |
| lineage2.2.1.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2 | 2 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR294266 | HR-TB | None | SRR6046397 | Other | None | ERR4831117 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR323053 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR3283055 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4811493 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176740 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4816656 | HR-TB | None |
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