Rv3457c - c.-499_-497delAAGinsCGC
Drug resistance types
9 Sensitive
1 RR-TB
26 HR-TB
7 MDR-TB
1 Pre-XDR-TB
3 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| M.canetti;lineage4.9 | 5 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 4 |
| 3 | |
| La3;lineage4.9 | 5 |
| M.canetti;lineage2.2 | 2 |
| lineage1.2.1.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.1.2.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage2.2 | 2 |
| La1.7 | 1 |
| lineage4.6.2.2 | 4 |
| lineage3 | 3 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.2.BCG | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage4.8 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage2.1 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044942 | HR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR9786843 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR990545 | Other | lineage3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR176751 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR212001 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR26159043 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4800341 | Other | lineage3 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR25827682 | Other | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR6045555 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None |
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