TB-Profiler result

Run: SRR12006550
Summary

Run ID: SRR12006550

Sample name:

Date: 03-04-2023 05:51:55

Number of reads: 2139999

Percentage reads mapped: 75.92

Strain: lineage1.2.1.2

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage1 Indo-Oceanic EAI RD239 0.88
lineage1.2.1 Indo-Oceanic EAI2 RD239 0.99
lineage1.2.1.2 Indo-Oceanic NA RD239 0.96
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.24 streptomycin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5969 p.His244Tyr missense_variant 1.0
gyrB 6112 p.Met291Ile missense_variant 0.95
gyrB 6215 p.Ser326Thr missense_variant 0.17
gyrB 6223 c.984G>C synonymous_variant 0.18
gyrB 6238 c.999G>A synonymous_variant 0.16
gyrB 6242 p.Arg335Lys missense_variant 0.16
gyrB 6248 c.1009C>T synonymous_variant 0.17
gyrB 6265 c.1026C>T synonymous_variant 0.15
gyrB 6268 c.1029C>G synonymous_variant 0.16
gyrB 6286 c.1047T>C synonymous_variant 0.16
gyrB 6292 c.1053G>T synonymous_variant 0.16
gyrB 6295 c.1056A>G synonymous_variant 0.16
gyrA 6307 c.-995T>G upstream_gene_variant 0.18
gyrA 6811 c.-491C>T upstream_gene_variant 0.16
gyrA 6838 c.-464C>G upstream_gene_variant 0.17
gyrA 6841 c.-461T>C upstream_gene_variant 0.18
gyrA 6862 c.-440C>G upstream_gene_variant 0.16
gyrA 6865 c.-437G>C upstream_gene_variant 0.16
gyrA 6869 c.-433T>C upstream_gene_variant 0.16
gyrA 7039 c.-263G>A upstream_gene_variant 0.16
gyrB 7051 p.Glu604Asp missense_variant 0.17
gyrA 7057 c.-245C>G upstream_gene_variant 0.17
gyrA 7060 c.-242T>C upstream_gene_variant 0.19
gyrA 7066 c.-236G>T upstream_gene_variant 0.16
gyrA 7078 c.-224A>C upstream_gene_variant 0.17
gyrA 7081 c.-221T>C upstream_gene_variant 0.16
gyrA 7090 c.-212C>T upstream_gene_variant 0.17
gyrA 7099 c.-203G>A upstream_gene_variant 0.16
gyrA 7108 c.-194G>A upstream_gene_variant 0.19
gyrA 7114 c.-188C>A upstream_gene_variant 0.19
gyrB 7124 p.Ser629Thr missense_variant 0.22
gyrA 7132 c.-170T>G upstream_gene_variant 0.19
gyrA 7136 c.-166T>C upstream_gene_variant 0.18
gyrA 7141 c.-161T>C upstream_gene_variant 0.18
gyrA 7147 c.-155G>C upstream_gene_variant 0.18
gyrA 7153 c.-149G>C upstream_gene_variant 0.17
gyrA 7165 c.-137C>G upstream_gene_variant 0.17
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7427 c.126G>C synonymous_variant 0.17
gyrA 7433 c.132G>C synonymous_variant 0.18
gyrA 7442 c.141G>C synonymous_variant 0.21
gyrA 7457 c.156T>C synonymous_variant 0.27
gyrA 7475 c.174A>G synonymous_variant 0.28
gyrA 7480 p.Phe60Tyr missense_variant 0.28
gyrA 7484 c.183T>C synonymous_variant 0.27
gyrA 7490 c.189C>A synonymous_variant 0.31
gyrA 7496 c.195C>G synonymous_variant 0.29
gyrA 7523 c.222C>G synonymous_variant 0.25
gyrA 7526 c.225G>T synonymous_variant 0.25
gyrA 7532 c.231T>C synonymous_variant 0.25
gyrA 7535 c.234C>G synonymous_variant 0.24
gyrA 7541 c.240C>G synonymous_variant 0.22
gyrA 7547 c.246C>T synonymous_variant 0.22
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7601 c.300C>G synonymous_variant 0.16
gyrA 7622 c.321C>T synonymous_variant 0.19
gyrA 7631 c.330G>C synonymous_variant 0.16
gyrA 7637 c.336C>T synonymous_variant 0.15
gyrA 7685 c.384G>A synonymous_variant 0.18
gyrA 7691 c.390C>G synonymous_variant 0.21
gyrA 7697 c.396C>G synonymous_variant 0.22
gyrA 7710 c.409T>C synonymous_variant 0.24
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.23
gyrA 7763 c.462T>G synonymous_variant 0.17
gyrA 7799 c.498A>G synonymous_variant 0.17
gyrA 8135 c.834C>G synonymous_variant 0.16
gyrA 8138 c.837C>T synonymous_variant 0.16
gyrA 8156 c.855T>C synonymous_variant 0.21
gyrA 8168 c.867A>G synonymous_variant 0.22
gyrA 8177 c.876A>T synonymous_variant 0.22
gyrA 8198 c.897T>C synonymous_variant 0.26
gyrA 8207 c.906T>C synonymous_variant 0.27
gyrA 8219 c.918T>C synonymous_variant 0.25
gyrA 8225 c.924T>C synonymous_variant 0.22
gyrA 8228 c.927G>C synonymous_variant 0.21
gyrA 8235 c.934_936delTTAinsCTG synonymous_variant 0.19
gyrA 8246 c.945C>G synonymous_variant 0.19
gyrA 8247 p.Ile316Val missense_variant 0.19
gyrA 8264 c.963T>C synonymous_variant 0.2
gyrA 8283 p.Ile328Leu missense_variant 0.18
gyrA 8288 c.987T>C synonymous_variant 0.16
gyrA 8294 c.993T>C synonymous_variant 0.26
gyrA 8324 c.1023T>C synonymous_variant 0.27
gyrA 8330 c.1029C>G synonymous_variant 0.25
gyrA 8339 c.1038A>C synonymous_variant 0.23
gyrA 8340 p.Ala347Ser missense_variant 0.22
gyrA 8360 c.1059G>C synonymous_variant 0.22
gyrA 8375 c.1074G>C synonymous_variant 0.23
gyrA 8382 p.Leu361Met missense_variant 0.24
gyrA 8393 c.1092T>C synonymous_variant 0.22
gyrA 8399 c.1098T>C synonymous_variant 0.21
gyrA 8401 p.Asp367Ala missense_variant 0.23
gyrA 8420 c.1119T>C synonymous_variant 0.21
gyrA 8423 c.1122G>C synonymous_variant 0.21
gyrA 8442 c.1141C>T synonymous_variant 0.16
gyrA 8452 p.Ala384Val missense_variant 0.91
gyrA 8502 c.1201C>T synonymous_variant 0.19
gyrA 8513 c.1212C>G synonymous_variant 0.17
gyrA 8516 c.1215T>C synonymous_variant 0.16
gyrA 8519 c.1218A>C synonymous_variant 0.17
gyrA 8528 c.1227G>C synonymous_variant 0.17
gyrA 8540 c.1239C>G synonymous_variant 0.17
gyrA 8543 c.1242C>G synonymous_variant 0.18
gyrA 8546 p.Asp415Glu missense_variant 0.18
gyrA 8552 c.1251C>G synonymous_variant 0.18
gyrA 8561 c.1260A>G synonymous_variant 0.22
gyrA 8579 c.1278C>T synonymous_variant 0.23
gyrA 8588 c.1287G>A synonymous_variant 0.22
gyrA 8597 c.1296C>G synonymous_variant 0.24
gyrA 8603 c.1302A>G synonymous_variant 0.24
gyrA 8624 c.1323G>C synonymous_variant 0.2
gyrA 8627 c.1326C>G synonymous_variant 0.19
gyrA 8636 c.1335A>C synonymous_variant 0.21
gyrA 8642 c.1341A>G synonymous_variant 0.22
gyrA 8645 c.1344C>T synonymous_variant 0.18
gyrA 8690 c.1389C>G synonymous_variant 0.18
gyrA 8693 c.1392T>C synonymous_variant 0.18
gyrA 8740 p.Arg480His missense_variant 0.2
gyrA 8750 c.1449C>G synonymous_variant 0.18
gyrA 8751 p.Ala484Ser missense_variant 0.18
gyrA 8756 c.1455A>G synonymous_variant 0.19
gyrA 8762 c.1461G>C synonymous_variant 0.21
gyrA 8767 p.Arg489Lys missense_variant 0.24
gyrA 8780 p.Asp493Glu missense_variant 0.19
gyrA 8783 c.1482G>T synonymous_variant 0.2
gyrA 8801 c.1500G>C synonymous_variant 0.16
gyrA 8804 c.1503C>G synonymous_variant 0.16
gyrA 8810 c.1509A>C synonymous_variant 0.16
gyrA 8818 p.Ser506Asn missense_variant 0.19
gyrA 8828 c.1527T>C synonymous_variant 0.19
gyrA 8829 c.1528T>C synonymous_variant 0.22
gyrA 8852 c.1551T>C synonymous_variant 0.25
gyrA 8858 c.1557T>C synonymous_variant 0.24
gyrA 8867 c.1566A>G synonymous_variant 0.25
gyrA 8870 c.1569G>C synonymous_variant 0.24
gyrA 8873 c.1572A>C synonymous_variant 0.24
gyrA 8897 c.1596T>C synonymous_variant 0.27
gyrA 8903 c.1602T>C synonymous_variant 0.28
gyrA 8939 c.1638T>C synonymous_variant 0.24
gyrA 8942 c.1641G>C synonymous_variant 0.24
gyrA 8945 c.1644G>C synonymous_variant 0.24
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.24
gyrA 8966 c.1665C>G synonymous_variant 0.23
gyrA 8967 p.Ala556Arg missense_variant 0.23
gyrA 8990 c.1689C>G synonymous_variant 0.17
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9197 c.1896G>C synonymous_variant 0.17
gyrA 9204 p.Ser635Thr missense_variant 0.16
gyrA 9224 c.1923C>T synonymous_variant 0.19
gyrA 9230 c.1929T>C synonymous_variant 0.17
gyrA 9252 p.Val651Ile missense_variant 0.16
gyrA 9260 c.1959G>C synonymous_variant 0.83
gyrA 9275 c.1974G>A synonymous_variant 0.17
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9329 c.2028C>G synonymous_variant 0.22
gyrA 9335 c.2034G>C synonymous_variant 0.22
gyrA 9338 c.2037G>A synonymous_variant 0.22
gyrA 9345 c.2044A>C synonymous_variant 0.18
gyrA 9365 c.2064G>A synonymous_variant 0.16
gyrA 9374 c.2073G>C synonymous_variant 0.16
gyrA 9377 c.2076A>G synonymous_variant 0.16
gyrA 9383 c.2082T>C synonymous_variant 0.18
gyrA 9386 c.2085T>C synonymous_variant 0.16
gyrA 9395 c.2094G>C synonymous_variant 0.17
gyrA 9398 c.2097T>C synonymous_variant 0.17
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575368 c.21T>C synonymous_variant 1.0
ccsA 620288 p.Arg133Gln missense_variant 0.15
ccsA 620307 c.417C>A synonymous_variant 0.18
rpoB 760181 c.375T>C synonymous_variant 0.16
rpoB 760184 c.378A>G synonymous_variant 0.16
rpoB 760235 c.429T>C synonymous_variant 0.19
rpoB 760253 c.447T>C synonymous_variant 0.18
rpoB 760274 c.468G>A synonymous_variant 0.25
rpoB 760283 c.477G>C synonymous_variant 0.28
rpoB 760307 c.501T>C synonymous_variant 0.3
rpoB 760310 c.504G>T synonymous_variant 0.31
rpoB 760328 c.522G>C synonymous_variant 0.31
rpoB 760331 c.525G>C synonymous_variant 0.3
rpoB 760337 c.531C>G synonymous_variant 0.3
rpoB 760340 c.534G>C synonymous_variant 0.29
rpoB 760361 c.555T>C synonymous_variant 0.33
rpoB 760370 c.564C>G synonymous_variant 0.32
rpoB 760376 p.Asp190Glu missense_variant 0.3
rpoB 760380 p.Thr192Leu missense_variant 0.29
rpoB 760415 c.609C>T synonymous_variant 0.22
rpoB 760424 c.618C>G synonymous_variant 0.22
rpoB 760430 c.624T>C synonymous_variant 0.19
rpoB 760475 c.669A>G synonymous_variant 0.17
rpoB 760481 c.675G>T synonymous_variant 0.18
rpoB 760484 c.678A>G synonymous_variant 0.18
rpoB 760520 c.714C>G synonymous_variant 0.17
rpoB 760522 p.Ser239Asn missense_variant 0.18
rpoB 760547 c.741G>T synonymous_variant 0.2
rpoB 760563 p.Arg253Met missense_variant 0.18
rpoB 760591 p.Val262Ala missense_variant 0.23
rpoB 760646 c.840C>G synonymous_variant 0.17
rpoB 760661 c.855A>C synonymous_variant 0.19
rpoB 760670 c.864G>C synonymous_variant 0.24
rpoB 760674 c.868T>C synonymous_variant 0.23
rpoB 760679 c.873A>G synonymous_variant 0.21
rpoB 760683 c.877T>C synonymous_variant 0.2
rpoB 760710 c.904C>T synonymous_variant 0.28
rpoB 760724 c.918T>C synonymous_variant 0.3
rpoB 760730 c.924T>C synonymous_variant 0.26
rpoB 760751 c.945G>C synonymous_variant 0.31
rpoB 760757 c.951T>C synonymous_variant 0.28
rpoB 760759 p.Val318Ala missense_variant 0.3
rpoB 760769 c.963C>G synonymous_variant 0.29
rpoB 760793 c.987A>G synonymous_variant 0.26
rpoB 760805 c.999G>C synonymous_variant 0.26
rpoB 760817 c.1011A>G synonymous_variant 0.25
rpoB 760820 c.1014T>C synonymous_variant 0.27
rpoB 760826 c.1020C>G synonymous_variant 0.3
rpoB 760830 c.1024T>C synonymous_variant 0.31
rpoB 760841 c.1035T>C synonymous_variant 0.29
rpoB 760845 p.Thr347Ala missense_variant 0.28
rpoB 760850 c.1044G>A synonymous_variant 0.27
rpoB 760859 c.1053T>C synonymous_variant 0.23
rpoB 760862 c.1056G>C synonymous_variant 0.22
rpoB 760869 p.Val355Thr missense_variant 0.19
rpoB 760886 c.1080A>G synonymous_variant 0.23
rpoB 760919 c.1113C>G synonymous_variant 0.23
rpoB 760925 c.1119T>C synonymous_variant 0.23
rpoB 760928 c.1122G>C synonymous_variant 0.21
rpoB 760931 c.1125C>G synonymous_variant 0.21
rpoB 760946 c.1140A>G synonymous_variant 0.26
rpoB 760973 c.1167G>C synonymous_variant 0.25
rpoB 760982 c.1176G>C synonymous_variant 0.25
rpoB 761015 c.1209G>C synonymous_variant 0.29
rpoB 761021 c.1215G>C synonymous_variant 0.28
rpoB 761027 c.1221A>G synonymous_variant 0.27
rpoB 761036 c.1230G>C synonymous_variant 0.27
rpoB 761037 c.1231T>C synonymous_variant 0.26
rpoB 761057 c.1251G>C synonymous_variant 0.3
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.28
rpoB 761102 c.1296A>G synonymous_variant 0.27
rpoB 761129 c.1323G>C synonymous_variant 0.27
rpoB 761133 c.1327T>C synonymous_variant 0.26
rpoB 761147 c.1341C>T synonymous_variant 0.23
rpoB 761150 c.1344A>C synonymous_variant 0.21
rpoB 761165 c.1359G>C synonymous_variant 0.21
rpoB 761171 c.1365C>T synonymous_variant 0.23
rpoB 761180 c.1374A>C synonymous_variant 0.24
rpoB 761189 c.1383T>C synonymous_variant 0.23
rpoB 761195 c.1389G>C synonymous_variant 0.23
rpoB 761207 c.1401C>T synonymous_variant 0.24
rpoB 761213 c.1407G>C synonymous_variant 0.23
rpoB 761234 c.1428G>C synonymous_variant 0.24
rpoB 761249 c.1443A>G synonymous_variant 0.27
rpoB 761255 c.1449T>G synonymous_variant 0.3
rpoB 761261 c.1455G>T synonymous_variant 0.29
rpoB 761264 c.1458C>G synonymous_variant 0.3
rpoB 761318 c.1512G>C synonymous_variant 0.19
rpoB 761327 c.1521A>G synonymous_variant 0.2
rpoB 761393 c.1587G>A synonymous_variant 0.16
rpoB 761465 c.1659G>C synonymous_variant 0.15
rpoB 761492 c.1686G>C synonymous_variant 0.19
rpoB 761510 c.1704T>C synonymous_variant 0.2
rpoB 761531 c.1725C>G synonymous_variant 0.24
rpoB 761537 c.1731C>G synonymous_variant 0.26
rpoB 761561 c.1755C>G synonymous_variant 0.26
rpoB 761564 c.1758G>C synonymous_variant 0.26
rpoB 761570 c.1764T>C synonymous_variant 0.29
rpoB 761573 c.1767C>G synonymous_variant 0.29
rpoB 761579 c.1773G>C synonymous_variant 0.29
rpoB 761606 c.1800C>G synonymous_variant 0.27
rpoB 761612 c.1806G>C synonymous_variant 0.24
rpoB 761615 c.1809A>C synonymous_variant 0.23
rpoB 761636 c.1830G>T synonymous_variant 0.23
rpoB 761640 c.1834C>T synonymous_variant 0.23
rpoB 761645 c.1839C>G synonymous_variant 0.22
rpoB 761648 c.1842T>C synonymous_variant 0.22
rpoB 761657 c.1851C>G synonymous_variant 0.24
rpoB 761669 c.1863C>T synonymous_variant 0.2
rpoB 761675 c.1869G>C synonymous_variant 0.16
rpoB 761848 p.Cys681Ser missense_variant 0.16
rpoB 761852 c.2046C>G synonymous_variant 0.18
rpoB 761858 c.2052G>C synonymous_variant 0.18
rpoB 761867 c.2061C>G synonymous_variant 0.18
rpoB 761870 p.Asp688Glu missense_variant 0.18
rpoB 761873 c.2067A>G synonymous_variant 0.19
rpoB 761876 c.2070C>G synonymous_variant 0.19
rpoB 761885 c.2079T>C synonymous_variant 0.2
rpoB 761891 c.2085G>C synonymous_variant 0.2
rpoB 761909 c.2103T>C synonymous_variant 0.17
rpoB 761912 c.2106T>C synonymous_variant 0.18
rpoB 761915 p.Asp703Glu missense_variant 0.17
rpoB 761916 p.Asp704Asn missense_variant 0.16
rpoB 761921 c.2115C>T synonymous_variant 0.19
rpoB 761948 c.2142G>C synonymous_variant 0.21
rpoB 761954 c.2148C>G synonymous_variant 0.21
rpoB 761969 c.2163G>A synonymous_variant 0.2
rpoB 761999 c.2193G>C synonymous_variant 0.2
rpoB 762008 c.2202C>G synonymous_variant 0.22
rpoB 762014 c.2208C>T synonymous_variant 0.2
rpoB 762017 c.2211A>G synonymous_variant 0.2
rpoB 762029 c.2223C>G synonymous_variant 0.19
rpoB 762035 c.2229G>C synonymous_variant 0.19
rpoB 762053 c.2247T>C synonymous_variant 0.2
rpoB 762062 c.2256T>C synonymous_variant 0.25
rpoB 762065 c.2259T>C synonymous_variant 0.26
rpoB 762083 c.2277T>C synonymous_variant 0.27
rpoB 762086 c.2280G>C synonymous_variant 0.26
rpoB 762101 c.2295C>G synonymous_variant 0.26
rpoB 762114 p.Ile770Val missense_variant 0.28
rpoB 762131 c.2325C>G synonymous_variant 0.29
rpoB 762143 c.2337T>C synonymous_variant 0.28
rpoB 762149 c.2343G>C synonymous_variant 0.28
rpoB 762176 c.2370T>C synonymous_variant 0.33
rpoB 762185 c.2379G>C synonymous_variant 0.32
rpoB 762233 c.2427G>C synonymous_variant 0.31
rpoB 762254 c.2448T>C synonymous_variant 0.31
rpoB 762257 c.2451C>G synonymous_variant 0.28
rpoB 762284 c.2478G>T synonymous_variant 0.23
rpoB 762293 c.2487T>C synonymous_variant 0.23
rpoB 762296 c.2490G>C synonymous_variant 0.22
rpoB 762317 c.2511A>G synonymous_variant 0.21
rpoB 762329 c.2523G>C synonymous_variant 0.19
rpoB 762338 c.2532T>C synonymous_variant 0.21
rpoB 762347 c.2541T>C synonymous_variant 0.19
rpoB 762362 p.Glu852Asp missense_variant 0.22
rpoB 762368 c.2562G>A synonymous_variant 0.22
rpoB 762369 c.2563T>C synonymous_variant 0.22
rpoC 762398 c.-972T>C upstream_gene_variant 0.27
rpoC 762401 c.-969G>C upstream_gene_variant 0.26
rpoC 762404 c.-966T>C upstream_gene_variant 0.26
rpoC 762410 c.-960T>C upstream_gene_variant 0.3
rpoC 762416 c.-954A>G upstream_gene_variant 0.31
rpoC 762434 c.-936T>C upstream_gene_variant 0.3
rpoC 762443 c.-927G>C upstream_gene_variant 0.31
rpoC 762449 c.-921C>G upstream_gene_variant 0.31
rpoC 762452 c.-918G>C upstream_gene_variant 0.3
rpoC 762470 c.-900G>C upstream_gene_variant 0.28
rpoB 762489 p.Val895Gln missense_variant 0.23
rpoC 762509 c.-861T>G upstream_gene_variant 0.23
rpoB 762510 p.Ala902Pro missense_variant 0.23
rpoB 762750 p.Leu982Met missense_variant 0.2
rpoC 762753 c.-617T>C upstream_gene_variant 0.21
rpoC 762758 c.-612G>C upstream_gene_variant 0.24
rpoC 762782 c.-588T>C upstream_gene_variant 0.32
rpoB 762785 p.Asp993Glu missense_variant 0.32
rpoC 762788 c.-582G>C upstream_gene_variant 0.3
rpoB 762789 p.Leu995Met missense_variant 0.3
rpoB 762795 p.Asp997Asn missense_variant 0.29
rpoB 762799 p.Ala998Gly missense_variant 0.29
rpoC 762812 c.-558C>G upstream_gene_variant 0.29
rpoB 762813 p.Met1003Val missense_variant 0.29
rpoC 762818 c.-552C>G upstream_gene_variant 0.3
rpoC 762827 c.-543G>C upstream_gene_variant 0.28
rpoC 762836 c.-534C>T upstream_gene_variant 0.34
rpoC 762857 c.-513C>G upstream_gene_variant 0.32
rpoC 762860 c.-510G>C upstream_gene_variant 0.32
rpoC 762863 c.-507T>C upstream_gene_variant 0.34
rpoC 762920 c.-450C>G upstream_gene_variant 0.27
rpoC 762929 c.-441G>C upstream_gene_variant 0.27
rpoC 762947 c.-423C>G upstream_gene_variant 0.31
rpoC 762962 c.-408C>T upstream_gene_variant 0.35
rpoC 762989 c.-381G>C upstream_gene_variant 0.34
rpoC 762995 c.-375G>T upstream_gene_variant 0.36
rpoC 763028 c.-342T>C upstream_gene_variant 0.26
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.26
rpoC 763040 c.-330C>G upstream_gene_variant 0.27
rpoC 763070 c.-300T>C upstream_gene_variant 0.23
rpoC 763085 c.-285C>G upstream_gene_variant 0.2
rpoC 763115 c.-255T>C upstream_gene_variant 0.18
rpoC 763139 c.-231C>T upstream_gene_variant 0.16
rpoC 763148 c.-222G>C upstream_gene_variant 0.2
rpoC 763158 c.-212C>T upstream_gene_variant 0.24
rpoC 763166 c.-204A>G upstream_gene_variant 0.22
rpoC 763181 c.-189G>T upstream_gene_variant 0.23
rpoC 763202 c.-168A>C upstream_gene_variant 0.21
rpoC 763205 c.-165G>C upstream_gene_variant 0.21
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.21
rpoC 763214 c.-156T>C upstream_gene_variant 0.21
rpoC 763226 c.-144A>G upstream_gene_variant 0.21
rpoC 763238 c.-132T>C upstream_gene_variant 0.2
rpoC 763441 c.72C>T synonymous_variant 0.17
rpoC 763444 c.75T>C synonymous_variant 0.17
rpoC 763456 c.87A>G synonymous_variant 0.18
rpoC 763486 c.117T>G synonymous_variant 0.2
rpoC 763528 c.159G>A synonymous_variant 0.23
rpoC 763531 c.162G>C synonymous_variant 0.76
rpoC 763546 c.177A>G synonymous_variant 0.22
rpoC 763570 c.201G>C synonymous_variant 0.24
rpoC 763573 c.204G>C synonymous_variant 0.23
rpoC 763594 c.225C>T synonymous_variant 0.2
rpoC 763636 c.267T>C synonymous_variant 0.21
rpoC 763660 c.291T>G synonymous_variant 0.19
rpoC 763675 c.306C>G synonymous_variant 0.2
rpoC 763702 c.333C>G synonymous_variant 0.17
rpoC 763717 c.348T>C synonymous_variant 0.16
rpoC 763723 c.354G>C synonymous_variant 0.2
rpoC 763732 c.363C>G synonymous_variant 0.21
rpoC 763741 c.372C>T synonymous_variant 0.19
rpoC 763744 c.375G>C synonymous_variant 0.21
rpoC 763765 c.396T>C synonymous_variant 0.19
rpoC 763774 c.405G>C synonymous_variant 0.17
rpoC 763780 c.411C>G synonymous_variant 0.17
rpoC 763792 p.Glu141Asp missense_variant 0.21
rpoC 763807 c.438T>C synonymous_variant 0.24
rpoC 763835 p.Ala156Met missense_variant 0.23
rpoC 763852 c.483C>G synonymous_variant 0.21
rpoC 763853 p.Val162Ile missense_variant 0.19
rpoC 763858 c.489A>G synonymous_variant 0.21
rpoC 763872 p.Gly168Ala missense_variant 0.21
rpoC 763876 p.Glu169Asp missense_variant 0.19
rpoC 763879 c.510A>G synonymous_variant 0.2
rpoC 763884 p.Ala172Val missense_variant 0.8
rpoC 763886 p.Arg173Ser missense_variant 0.78
rpoC 763891 c.522G>C synonymous_variant 0.19
rpoC 763894 c.525A>G synonymous_variant 0.2
rpoC 763900 c.531G>C synonymous_variant 0.21
rpoC 763906 c.537C>T synonymous_variant 0.2
rpoC 763933 c.564C>T synonymous_variant 0.23
rpoC 763945 c.576T>C synonymous_variant 0.23
rpoC 763951 c.582G>C synonymous_variant 0.2
rpoC 763960 c.591T>C synonymous_variant 0.21
rpoC 764002 c.633C>G synonymous_variant 0.16
rpoC 764005 c.636G>C synonymous_variant 0.16
rpoC 764011 c.642T>C synonymous_variant 0.19
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.16
rpoC 764032 p.Asp221Glu missense_variant 0.18
rpoC 764040 p.Ser224Thr missense_variant 0.18
rpoC 764044 c.675T>C synonymous_variant 0.18
rpoC 764059 c.690G>T synonymous_variant 0.19
rpoC 764098 c.729A>G synonymous_variant 0.23
rpoC 764101 c.732C>G synonymous_variant 0.21
rpoC 764102 p.Val245Ile missense_variant 0.22
rpoC 764112 p.Tyr248Phe missense_variant 0.23
rpoC 764116 c.747C>T synonymous_variant 0.24
rpoC 764131 c.762T>C synonymous_variant 0.25
rpoC 764140 c.771C>T synonymous_variant 0.23
rpoC 764188 c.819A>G synonymous_variant 0.24
rpoC 764195 p.Ser276Ile missense_variant 0.23
rpoC 764203 c.834G>C synonymous_variant 0.22
rpoC 764206 c.837T>C synonymous_variant 0.23
rpoC 764215 c.846A>G synonymous_variant 0.27
rpoC 764257 c.888G>C synonymous_variant 0.22
rpoC 764266 c.897T>C synonymous_variant 0.23
rpoC 764269 c.900G>C synonymous_variant 0.23
rpoC 764272 c.903G>C synonymous_variant 0.25
rpoC 764278 c.909A>G synonymous_variant 0.28
rpoC 764293 c.924G>C synonymous_variant 0.31
rpoC 764308 c.939G>C synonymous_variant 0.25
rpoC 764338 c.969G>A synonymous_variant 0.22
rpoC 764353 c.984G>C synonymous_variant 0.27
rpoC 764365 c.996C>T synonymous_variant 0.19
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.24
rpoC 764387 c.1018T>C synonymous_variant 0.26
rpoC 764401 c.1032C>T synonymous_variant 0.22
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.22
rpoC 764413 c.1044C>T synonymous_variant 0.23
rpoC 764419 c.1050C>G synonymous_variant 0.21
rpoC 764428 c.1059G>C synonymous_variant 0.2
rpoC 764431 c.1062G>C synonymous_variant 0.2
rpoC 764434 c.1065A>G synonymous_variant 0.2
rpoC 764437 c.1068G>A synonymous_variant 0.2
rpoC 764446 c.1077T>C synonymous_variant 0.18
rpoC 764449 c.1080G>C synonymous_variant 0.18
rpoC 764452 c.1083T>C synonymous_variant 0.2
rpoC 764458 c.1089G>C synonymous_variant 0.22
rpoC 764461 c.1092A>G synonymous_variant 0.22
rpoC 764497 c.1128A>G synonymous_variant 0.22
rpoC 764500 c.1131C>G synonymous_variant 0.2
rpoC 764515 c.1146C>T synonymous_variant 0.18
rpoC 764527 c.1158C>T synonymous_variant 0.17
rpoC 764536 c.1167G>C synonymous_variant 0.15
rpoC 764554 c.1185C>T synonymous_variant 0.24
rpoC 764560 c.1191T>C synonymous_variant 0.24
rpoC 764566 c.1197C>G synonymous_variant 0.23
rpoC 764575 c.1206T>G synonymous_variant 0.2
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.2
rpoC 764593 c.1224C>T synonymous_variant 0.28
rpoC 764611 c.1242G>C synonymous_variant 0.3
rpoC 764626 c.1257C>T synonymous_variant 0.29
rpoC 764632 c.1263T>C synonymous_variant 0.26
rpoC 764650 c.1281G>T synonymous_variant 0.22
rpoC 764716 c.1347G>C synonymous_variant 0.24
rpoC 764752 c.1383G>C synonymous_variant 0.22
rpoC 764764 c.1395T>C synonymous_variant 0.17
rpoC 764791 c.1422C>G synonymous_variant 0.22
rpoC 764809 c.1440C>T synonymous_variant 0.24
rpoC 764815 c.1446A>G synonymous_variant 0.25
rpoC 764827 c.1458G>C synonymous_variant 0.28
rpoC 764858 c.1489T>C synonymous_variant 0.27
rpoC 764888 c.1519T>C synonymous_variant 0.22
rpoC 764893 c.1524T>C synonymous_variant 0.21
rpoC 764911 c.1542A>G synonymous_variant 0.27
rpoC 764932 c.1563C>G synonymous_variant 0.26
rpoC 764948 c.1579T>C synonymous_variant 0.23
rpoC 764968 c.1599T>C synonymous_variant 0.2
rpoC 764995 c.1626C>G synonymous_variant 0.23
rpoC 765007 c.1638T>G synonymous_variant 0.23
rpoC 765008 c.1639T>C synonymous_variant 0.22
rpoC 765016 c.1647C>A synonymous_variant 0.22
rpoC 765019 c.1650A>G synonymous_variant 0.21
rpoC 765034 c.1665T>C synonymous_variant 0.23
rpoC 765040 c.1671T>C synonymous_variant 0.23
rpoC 765041 c.1672T>C synonymous_variant 0.23
rpoC 765047 c.1678T>C synonymous_variant 0.21
rpoC 765052 c.1683C>T synonymous_variant 0.21
rpoC 765073 c.1704G>C synonymous_variant 0.19
rpoC 765076 c.1707A>G synonymous_variant 0.19
rpoC 765079 c.1710T>G synonymous_variant 0.19
rpoC 765082 c.1713G>C synonymous_variant 0.19
rpoC 765085 c.1716T>C synonymous_variant 0.2
rpoC 765089 c.1720T>C synonymous_variant 0.2
rpoC 765103 c.1734G>T synonymous_variant 0.16
rpoC 765121 c.1752G>T synonymous_variant 0.16
rpoC 765370 c.2001G>T synonymous_variant 0.17
rpoC 765371 c.2002C>T synonymous_variant 0.17
rpoC 765379 c.2010G>T synonymous_variant 0.17
rpoC 765383 p.Met672Leu missense_variant 0.17
rpoC 765391 c.2022C>T synonymous_variant 0.15
rpoC 765394 c.2025G>A synonymous_variant 0.16
rpoC 765404 p.Leu679Val missense_variant 0.19
rpoC 765409 c.2040T>C synonymous_variant 0.19
rpoC 765412 c.2043T>C synonymous_variant 0.2
rpoC 765421 c.2052C>G synonymous_variant 0.22
rpoC 765452 p.Ala695Ser missense_variant 0.21
rpoC 765466 c.2097C>T synonymous_variant 0.23
rpoC 765478 c.2109T>C synonymous_variant 0.25
rpoC 765499 c.2130C>G synonymous_variant 0.26
rpoC 765508 c.2139C>G synonymous_variant 0.29
rpoC 765529 c.2160C>T synonymous_variant 0.29
rpoC 765541 c.2172C>G synonymous_variant 0.3
rpoC 765553 c.2184C>T synonymous_variant 0.27
rpoC 765556 c.2187G>C synonymous_variant 0.26
rpoC 765562 c.2193G>C synonymous_variant 0.25
rpoC 765580 c.2211G>C synonymous_variant 0.25
rpoC 765583 c.2214G>C synonymous_variant 0.25
rpoC 765613 p.His748Gln missense_variant 0.23
rpoC 765625 c.2256C>G synonymous_variant 0.22
rpoC 765628 c.2259G>C synonymous_variant 0.21
rpoC 765631 p.Asp754Glu missense_variant 0.2
rpoC 765658 c.2289C>T synonymous_variant 0.2
rpoC 765700 c.2331T>C synonymous_variant 0.17
rpoC 765734 c.2365T>C synonymous_variant 0.17
rpoC 765739 c.2370G>C synonymous_variant 0.18
rpoC 765751 c.2382C>G synonymous_variant 0.19
rpoC 765753 p.Asp795Ala missense_variant 0.2
rpoC 765772 c.2403C>G synonymous_variant 0.24
rpoC 765778 c.2409C>G synonymous_variant 0.24
rpoC 765784 c.2415C>G synonymous_variant 0.26
rpoC 765793 c.2424C>G synonymous_variant 0.24
rpoC 765796 c.2427C>T synonymous_variant 0.23
rpoC 765811 c.2442T>G synonymous_variant 0.25
rpoC 765826 c.2457T>C synonymous_variant 0.24
rpoC 765835 c.2466C>T synonymous_variant 0.23
rpoC 765871 c.2502T>C synonymous_variant 0.28
rpoC 765886 c.2517C>G synonymous_variant 0.28
rpoC 765928 c.2559C>G synonymous_variant 0.27
rpoC 765937 c.2568T>G synonymous_variant 0.27
rpoC 765947 c.2578T>C synonymous_variant 0.25
rpoC 765967 c.2598C>T synonymous_variant 0.26
rpoC 765982 c.2613C>T synonymous_variant 0.25
rpoC 765994 c.2625A>T synonymous_variant 0.24
rpoC 766009 c.2640G>C synonymous_variant 0.18
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.18
rpoC 766021 c.2652G>C synonymous_variant 0.19
rpoC 766027 c.2658G>T synonymous_variant 0.18
rpoC 766043 p.Gln892Glu missense_variant 0.17
rpoC 766054 c.2685C>G synonymous_variant 0.16
rpoC 766061 p.Val898Ile missense_variant 0.15
rpoC 766273 c.2904T>C synonymous_variant 0.16
rpoC 766274 p.Ala969Thr missense_variant 0.16
rpoC 766280 p.Ser971Gly missense_variant 0.16
rpoC 766288 c.2919C>T synonymous_variant 0.2
rpoC 766294 c.2925C>T synonymous_variant 0.21
rpoC 766303 c.2934C>T synonymous_variant 0.24
rpoC 766312 c.2943T>G synonymous_variant 0.26
rpoC 766321 c.2952C>G synonymous_variant 0.28
rpoC 766345 c.2976T>C synonymous_variant 0.31
rpoC 766348 c.2979A>G synonymous_variant 0.31
rpoC 766357 c.2988C>T synonymous_variant 0.26
rpoC 766363 c.2994G>C synonymous_variant 0.29
rpoC 766369 c.3000C>G synonymous_variant 0.29
rpoC 766381 c.3012C>T synonymous_variant 0.29
rpoC 766384 c.3015A>G synonymous_variant 0.29
rpoC 766390 c.3021C>T synonymous_variant 0.3
rpoC 766408 c.3039C>T synonymous_variant 0.29
rpoC 766426 c.3057C>T synonymous_variant 0.28
rpoC 766447 c.3078T>C synonymous_variant 0.26
rpoC 766483 c.3114G>C synonymous_variant 0.18
rpoC 766484 p.Val1039Ile missense_variant 0.18
rpoC 766492 c.3123T>C synonymous_variant 0.21
rpoC 766495 c.3126C>T synonymous_variant 0.19
rpoC 766522 c.3153C>G synonymous_variant 0.19
rpoC 766528 c.3159T>C synonymous_variant 0.2
rpoC 766531 c.3162G>T synonymous_variant 0.2
rpoC 766543 c.3174C>T synonymous_variant 0.21
rpoC 766549 c.3180G>C synonymous_variant 0.23
rpoC 766573 c.3204T>C synonymous_variant 0.22
rpoC 766583 p.Gly1072Ser missense_variant 0.21
rpoC 766591 c.3222A>G synonymous_variant 0.2
rpoC 766594 c.3225G>C synonymous_variant 0.21
rpoC 766597 c.3228C>G synonymous_variant 0.2
rpoC 766607 p.Ile1080Leu missense_variant 0.22
rpoC 766645 c.3276A>G synonymous_variant 0.26
rpoC 766657 c.3288A>G synonymous_variant 0.27
rpoC 766666 c.3297C>G synonymous_variant 0.27
rpoC 766672 c.3303T>C synonymous_variant 0.27
rpoC 766693 c.3324C>T synonymous_variant 0.23
rpoC 766726 c.3357T>C synonymous_variant 0.26
rpoC 766738 c.3369G>C synonymous_variant 0.28
rpoC 766765 c.3396A>C synonymous_variant 0.24
rpoC 766774 c.3405T>C synonymous_variant 0.24
rpoC 766801 c.3432C>A synonymous_variant 0.23
rpoC 766804 c.3435A>G synonymous_variant 0.22
rpoC 766843 c.3474T>C synonymous_variant 0.23
rpoC 766861 c.3492G>C synonymous_variant 0.21
rpoC 766864 c.3495G>C synonymous_variant 0.2
rpoC 766879 c.3510G>C synonymous_variant 0.21
rpoC 766888 c.3519G>C synonymous_variant 0.22
rpoC 766894 c.3525T>C synonymous_variant 0.21
rpoC 766895 c.3526T>C synonymous_variant 0.19
rpoC 766900 c.3531T>G synonymous_variant 0.21
rpoC 766903 c.3534C>T synonymous_variant 0.2
rpoC 766907 c.3538C>T synonymous_variant 0.2
rpoC 766918 c.3549C>T synonymous_variant 0.21
rpoC 766921 c.3552G>C synonymous_variant 0.21
rpoC 766924 p.Glu1185Asp missense_variant 0.21
rpoC 766933 c.3564A>G synonymous_variant 0.25
rpoC 766942 c.3573C>T synonymous_variant 0.19
rpoC 766945 c.3576A>C synonymous_variant 0.19
rpoC 766951 c.3582G>C synonymous_variant 0.16
rpoC 766963 c.3594T>C synonymous_variant 0.18
rpoC 766978 c.3609C>A synonymous_variant 0.19
rpoC 766996 c.3627C>T synonymous_variant 0.24
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.21
rpoC 767059 c.3690T>G synonymous_variant 0.24
rpoC 767098 c.3729T>C synonymous_variant 0.19
rpoC 767104 c.3735C>G synonymous_variant 0.16
rpoC 767105 p.Asn1246His missense_variant 0.16
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.16
rpsL 781649 c.90T>C synonymous_variant 0.22
rpsL 781655 c.96T>C synonymous_variant 0.21
rpsL 781682 c.123T>C synonymous_variant 0.26
rpsL 781715 c.156T>C synonymous_variant 0.27
rpsL 781728 c.169T>C synonymous_variant 0.26
rpsL 781733 c.174G>C synonymous_variant 0.25
rpsL 781736 c.177T>C synonymous_variant 0.24
rpsL 781742 c.183C>T synonymous_variant 0.24
rpsL 781751 c.192G>C synonymous_variant 0.23
rpsL 781754 c.195G>C synonymous_variant 0.23
rpsL 781760 c.201T>C synonymous_variant 0.2
rpsL 781811 c.252C>T synonymous_variant 0.23
rpsL 781817 c.258G>T synonymous_variant 0.23
rpsL 781829 c.270G>C synonymous_variant 0.23
rpsL 781832 c.273T>C synonymous_variant 0.22
rpsL 781838 c.279G>C synonymous_variant 0.24
rpsL 781841 c.282C>G synonymous_variant 0.28
rpsL 781859 c.300T>A synonymous_variant 0.26
rpsL 781868 c.309T>C synonymous_variant 0.24
rpsL 781871 c.312G>C synonymous_variant 0.24
rpsL 781892 c.333A>G synonymous_variant 0.28
rpsL 781898 c.339A>T synonymous_variant 0.31
rpsL 781916 c.357T>C synonymous_variant 0.29
rpsL 781929 p.Gly124Ser missense_variant 0.27
rplC 800612 c.-197A>G upstream_gene_variant 0.17
rplC 800654 c.-155T>C upstream_gene_variant 0.21
rplC 800693 c.-116A>G upstream_gene_variant 0.25
rplC 800703 c.-106T>C upstream_gene_variant 0.2
rplC 800715 c.-94A>C upstream_gene_variant 0.19
rplC 800720 c.-89T>C upstream_gene_variant 0.18
rplC 800723 c.-86C>G upstream_gene_variant 0.18
rplC 800771 c.-38C>T upstream_gene_variant 0.17
rplC 800856 c.48A>G synonymous_variant 0.17
rplC 800867 p.Ser20Asn missense_variant 0.17
rplC 800889 c.81C>G synonymous_variant 0.16
rplC 800904 c.96G>C synonymous_variant 0.17
rplC 801228 c.420T>C synonymous_variant 0.18
rplC 801249 c.441T>C synonymous_variant 0.17
rplC 801255 c.447C>T synonymous_variant 0.17
rplC 801258 c.450C>G synonymous_variant 0.17
fbiC 1303534 p.Ser202Ala missense_variant 0.18
fbiC 1303545 c.615A>G synonymous_variant 0.19
fbiC 1303575 c.645G>C synonymous_variant 0.19
fbiC 1303584 c.654C>G synonymous_variant 0.23
fbiC 1303590 c.660A>G synonymous_variant 0.22
fbiC 1303599 c.669C>T synonymous_variant 0.18
fbiC 1303605 c.675C>G synonymous_variant 0.17
fbiC 1303608 c.678G>A synonymous_variant 0.16
fbiC 1303614 c.684C>T synonymous_variant 0.17
fbiC 1303617 c.687C>G synonymous_variant 0.18
fbiC 1303632 c.702T>G synonymous_variant 0.23
fbiC 1303638 c.708A>G synonymous_variant 0.21
fbiC 1303647 c.717G>C synonymous_variant 0.19
fbiC 1303650 c.720G>C synonymous_variant 0.18
fbiC 1303653 c.723G>C synonymous_variant 0.17
fbiC 1303659 c.729T>C synonymous_variant 0.17
fbiC 1303661 p.Val244Ala missense_variant 0.16
fbiC 1303755 c.825T>C synonymous_variant 0.16
fbiC 1303818 c.888C>G synonymous_variant 0.16
fbiC 1303827 c.897A>G synonymous_variant 0.17
fbiC 1303846 p.Phe306Val missense_variant 0.17
fbiC 1303854 c.924T>C synonymous_variant 0.22
fbiC 1303860 c.930A>C synonymous_variant 0.22
fbiC 1303869 c.939T>C synonymous_variant 0.2
fbiC 1303878 c.948G>C synonymous_variant 0.21
fbiC 1303884 c.954T>G synonymous_variant 0.22
fbiC 1303897 c.967C>T synonymous_variant 0.18
fbiC 1303905 c.975G>C synonymous_variant 0.17
fbiC 1303913 p.Gly328Ala missense_variant 0.15
fbiC 1303935 c.1005G>C synonymous_variant 0.18
fbiC 1303944 c.1014G>A synonymous_variant 0.17
fbiC 1303947 c.1017T>C synonymous_variant 0.16
fbiC 1303948 p.Gly340Arg missense_variant 0.16
fbiC 1303956 c.1026A>G synonymous_variant 0.18
fbiC 1303961 p.Arg344Leu missense_variant 0.16
fbiC 1303971 c.1041T>C synonymous_variant 0.17
fbiC 1304613 c.1683T>G synonymous_variant 0.25
fbiC 1304625 c.1695C>T synonymous_variant 0.25
fbiC 1304634 c.1704C>G synonymous_variant 0.22
fbiC 1304640 c.1710A>C synonymous_variant 0.22
fbiC 1304646 c.1716T>C synonymous_variant 0.23
fbiC 1304655 c.1725C>T synonymous_variant 0.21
fbiC 1304658 c.1728C>G synonymous_variant 0.21
fbiC 1304670 c.1740G>C synonymous_variant 0.18
fbiC 1304671 p.Val581Thr missense_variant 0.17
fbiC 1304675 p.Gly582Glu missense_variant 0.17
fbiC 1304691 c.1761G>C synonymous_variant 0.2
fbiC 1304694 c.1764A>C synonymous_variant 0.21
fbiC 1304703 c.1773C>G synonymous_variant 0.23
fbiC 1304711 p.Ala594Glu missense_variant 0.19
fbiC 1304715 c.1785G>C synonymous_variant 0.2
fbiC 1304724 c.1794A>G synonymous_variant 0.22
fbiC 1304727 c.1797A>G synonymous_variant 0.26
fbiC 1304742 c.1812T>C synonymous_variant 0.19
fbiC 1304748 c.1818T>C synonymous_variant 0.19
fbiC 1304757 c.1827A>G synonymous_variant 0.2
fbiC 1304778 c.1848T>C synonymous_variant 0.19
fbiC 1304784 c.1854T>C synonymous_variant 0.19
fbiC 1304787 c.1857T>G synonymous_variant 0.19
fbiC 1304790 c.1860C>G synonymous_variant 0.19
fbiC 1304808 c.1878C>G synonymous_variant 0.21
fbiC 1304811 c.1881C>G synonymous_variant 0.2
fbiC 1304817 c.1887T>C synonymous_variant 0.24
fbiC 1304832 c.1902C>G synonymous_variant 0.23
fbiC 1304853 c.1923C>G synonymous_variant 0.23
fbiC 1304856 c.1926C>G synonymous_variant 0.24
fbiC 1304869 c.1939C>T synonymous_variant 0.26
fbiC 1304880 c.1950C>T synonymous_variant 0.23
fbiC 1304893 p.Gly655Ser missense_variant 0.24
fbiC 1304907 c.1977C>G synonymous_variant 0.22
fbiC 1304910 c.1980G>C synonymous_variant 0.23
fbiC 1304916 c.1986T>C synonymous_variant 0.28
fbiC 1304928 c.1998T>C synonymous_variant 0.3
fbiC 1304937 c.2007G>C synonymous_variant 0.31
fbiC 1304940 c.2010A>G synonymous_variant 0.33
fbiC 1304958 c.2028T>G synonymous_variant 0.3
fbiC 1304983 c.2053C>T synonymous_variant 0.25
fbiC 1304994 c.2064A>G synonymous_variant 0.24
fbiC 1305012 c.2082G>C synonymous_variant 0.18
fbiC 1305014 p.Thr695Ser missense_variant 0.17
fbiC 1305021 c.2091C>A synonymous_variant 0.17
fbiC 1305027 c.2097G>A synonymous_variant 0.16
fbiC 1305033 c.2103T>G synonymous_variant 0.16
fbiC 1305042 c.2112A>G synonymous_variant 0.15
fbiC 1305045 c.2115A>G synonymous_variant 0.15
embR 1417019 p.Cys110Tyr missense_variant 1.0
atpE 1460907 c.-138T>C upstream_gene_variant 0.93
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472028 n.183A>T non_coding_transcript_exon_variant 0.21
rrs 1472029 n.184C>T non_coding_transcript_exon_variant 0.19
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.19
rrs 1472031 n.186G>A non_coding_transcript_exon_variant 0.19
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.25
rrs 1472044 n.199G>T non_coding_transcript_exon_variant 0.26
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.28
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.28
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.32
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.36
rrs 1472300 n.455C>T non_coding_transcript_exon_variant 0.24
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.29
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.29
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.25
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.25
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.23
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.25
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.29
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.4
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.4
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.27
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.4
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.6
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.78
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 0.78
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.67
rrl 1473944 n.287G>A non_coding_transcript_exon_variant 0.67
rrl 1473964 n.307T>C non_coding_transcript_exon_variant 0.57
rrl 1473966 n.309T>C non_coding_transcript_exon_variant 0.57
rrl 1473971 n.314G>T non_coding_transcript_exon_variant 0.5
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.22
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.22
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.27
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.27
rrl 1474036 n.379G>A non_coding_transcript_exon_variant 0.45
rrl 1474040 n.383G>A non_coding_transcript_exon_variant 0.27
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.36
rrl 1474091 n.434C>T non_coding_transcript_exon_variant 0.36
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.4
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.53
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.6
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 0.5
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.55
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.5
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.5
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.44
rrl 1474282 n.625G>A non_coding_transcript_exon_variant 0.38
rrl 1474288 n.632_634delCTT non_coding_transcript_exon_variant 0.33
rrl 1474294 n.638_649delCTCTCCGGAGGA non_coding_transcript_exon_variant 0.33
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.33
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.33
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.25
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.22
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.29
rrl 1474409 n.756_766delACCCACACGCG non_coding_transcript_exon_variant 0.2
rrl 1474427 n.770A>C non_coding_transcript_exon_variant 0.17
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.38
rrl 1474732 n.1075A>G non_coding_transcript_exon_variant 0.37
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.65
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.67
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.69
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.64
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.7
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.8
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.8
rrl 1474962 n.1305T>C non_coding_transcript_exon_variant 0.8
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.8
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.8
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.8
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.67
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.55
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.55
rrl 1475028 n.1371G>A non_coding_transcript_exon_variant 0.62
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.56
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.33
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.14
rrl 1475201 n.1544G>A non_coding_transcript_exon_variant 0.14
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.15
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.15
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.15
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.3
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.25
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.25
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.25
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.27
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.25
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.31
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.5
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.41
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.4
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.43
rrl 1475409 n.1752T>C non_coding_transcript_exon_variant 0.5
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.47
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.46
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.36
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.33
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.4
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.29
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.33
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.29
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.29
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.25
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.27
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.2
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.2
rrl 1476025 n.2368G>T non_coding_transcript_exon_variant 0.25
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.25
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.25
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.25
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.25
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.57
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.58
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.55
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.53
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.53
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.37
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.37
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.35
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.3
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.48
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.48
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.25
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.27
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.28
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.25
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.25
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.18
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.18
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.18
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.19
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.17
rrl 1476717 n.3060C>T non_coding_transcript_exon_variant 0.17
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.15
inhA 1673499 c.-703T>C upstream_gene_variant 0.19
inhA 1673505 c.-697A>C upstream_gene_variant 0.19
inhA 1673535 c.-667A>G upstream_gene_variant 0.18
inhA 1673547 c.-655T>C upstream_gene_variant 0.19
fabG1 1673569 p.Val44Ile missense_variant 0.22
inhA 1673574 c.-628C>G upstream_gene_variant 0.19
inhA 1674561 c.360C>T synonymous_variant 0.16
inhA 1674582 c.381T>C synonymous_variant 0.2
inhA 1674585 c.384T>C synonymous_variant 0.19
inhA 1674589 p.Met130Leu missense_variant 0.21
inhA 1674601 p.Leu134Thr missense_variant 0.22
inhA 1674624 c.423A>C synonymous_variant 0.21
inhA 1674627 c.426T>C synonymous_variant 0.2
inhA 1674636 c.435C>G synonymous_variant 0.23
inhA 1674639 c.438C>G synonymous_variant 0.22
inhA 1674654 c.453G>C synonymous_variant 0.23
inhA 1674690 c.489C>G synonymous_variant 0.25
inhA 1674703 c.502T>C synonymous_variant 0.24
inhA 1674708 c.507G>A synonymous_variant 0.24
inhA 1674718 c.517_519delAGGinsCGC synonymous_variant 0.24
inhA 1674738 c.537C>G synonymous_variant 0.26
inhA 1674746 p.Tyr182Phe missense_variant 0.23
inhA 1674753 c.552G>T synonymous_variant 0.22
inhA 1674756 c.555T>C synonymous_variant 0.21
inhA 1674759 c.558G>C synonymous_variant 0.21
inhA 1674774 c.573A>G synonymous_variant 0.21
inhA 1674780 c.579T>C synonymous_variant 0.18
inhA 1674789 c.588G>A synonymous_variant 0.23
inhA 1674795 c.594G>C synonymous_variant 0.24
inhA 1674801 c.600T>C synonymous_variant 0.24
inhA 1674804 c.603G>C synonymous_variant 0.23
inhA 1674822 c.621C>G synonymous_variant 0.22
inhA 1674828 c.627G>A synonymous_variant 0.2
inhA 1674837 c.636C>G synonymous_variant 0.21
inhA 1674840 c.639C>G synonymous_variant 0.2
inhA 1674846 p.Ile215Met missense_variant 0.19
inhA 1674858 c.657G>A synonymous_variant 0.19
inhA 1674870 c.669T>C synonymous_variant 0.17
inhA 1674879 c.678T>C synonymous_variant 0.16
inhA 1674882 c.681G>C synonymous_variant 0.16
rpsA 1833589 c.48A>T synonymous_variant 0.2
rpsA 1833595 c.54T>G synonymous_variant 0.2
rpsA 1833667 c.126C>G synonymous_variant 0.26
rpsA 1833703 c.162C>T synonymous_variant 0.31
rpsA 1833724 c.183C>G synonymous_variant 0.24
rpsA 1833727 c.186G>C synonymous_variant 0.26
rpsA 1833745 c.204G>C synonymous_variant 0.26
rpsA 1833760 c.219C>T synonymous_variant 0.23
rpsA 1833772 c.231C>T synonymous_variant 0.24
rpsA 1833793 c.252C>T synonymous_variant 0.22
rpsA 1833811 c.270G>C synonymous_variant 0.2
rpsA 1833835 c.294C>T synonymous_variant 0.19
rpsA 1833838 c.297G>C synonymous_variant 0.19
rpsA 1833841 c.300C>G synonymous_variant 0.19
rpsA 1833844 c.303C>T synonymous_variant 0.21
rpsA 1833856 c.315A>G synonymous_variant 0.2
rpsA 1833874 c.333T>C synonymous_variant 0.18
rpsA 1833928 c.387G>C synonymous_variant 0.22
rpsA 1833931 c.390C>G synonymous_variant 0.22
rpsA 1833940 c.399C>G synonymous_variant 0.24
rpsA 1833971 c.430C>T synonymous_variant 0.26
rpsA 1833979 c.438T>C synonymous_variant 0.26
rpsA 1833988 c.447C>G synonymous_variant 0.29
rpsA 1834000 c.459G>C synonymous_variant 0.27
rpsA 1834021 c.480C>T synonymous_variant 0.31
rpsA 1834030 c.489C>G synonymous_variant 0.31
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.24
rpsA 1834102 c.561T>C synonymous_variant 0.24
rpsA 1834108 c.567C>G synonymous_variant 0.23
rpsA 1834169 p.Thr210Ala missense_variant 0.16
rpsA 1834177 c.636A>C synonymous_variant 0.18
rpsA 1834189 c.648G>C synonymous_variant 0.17
rpsA 1834192 c.651C>G synonymous_variant 0.18
rpsA 1834195 c.654G>C synonymous_variant 0.18
rpsA 1834210 c.669C>G synonymous_variant 0.19
rpsA 1834222 c.681T>C synonymous_variant 0.18
rpsA 1834249 c.708T>C synonymous_variant 0.22
rpsA 1834261 c.720A>G synonymous_variant 0.2
rpsA 1834264 c.723G>C synonymous_variant 0.2
rpsA 1834297 c.756C>T synonymous_variant 0.24
rpsA 1834303 c.762T>G synonymous_variant 0.24
rpsA 1834306 c.765T>C synonymous_variant 0.25
rpsA 1834321 c.780C>A synonymous_variant 0.31
rpsA 1834348 c.807T>C synonymous_variant 0.31
rpsA 1834366 c.825A>G synonymous_variant 0.32
rpsA 1834396 c.855G>C synonymous_variant 0.3
rpsA 1834411 c.870T>C synonymous_variant 0.3
rpsA 1834417 c.876G>C synonymous_variant 0.29
rpsA 1834423 c.882G>C synonymous_variant 0.29
rpsA 1834451 c.910T>C synonymous_variant 0.3
rpsA 1834468 c.927A>G synonymous_variant 0.24
rpsA 1834477 c.936C>T synonymous_variant 0.24
rpsA 1834489 c.948T>C synonymous_variant 0.25
rpsA 1834495 c.954G>A synonymous_variant 0.27
rpsA 1834498 c.957C>T synonymous_variant 0.28
rpsA 1834528 c.987T>C synonymous_variant 0.43
rpsA 1834543 c.1002C>T synonymous_variant 0.38
rpsA 1834546 c.1005T>C synonymous_variant 0.38
rpsA 1834555 c.1014T>C synonymous_variant 0.38
rpsA 1834609 c.1068T>C synonymous_variant 0.3
rpsA 1834633 c.1092A>G synonymous_variant 0.33
rpsA 1834639 c.1098T>C synonymous_variant 0.29
rpsA 1834654 p.Glu371Asp missense_variant 0.19
rpsA 1834732 c.1191T>C synonymous_variant 0.22
rpsA 1834733 p.Ala398Ser missense_variant 0.22
rpsA 1834738 c.1197A>G synonymous_variant 0.22
rpsA 1834753 c.1212T>C synonymous_variant 0.22
rpsA 1834759 c.1218A>C synonymous_variant 0.23
rpsA 1834765 c.1224A>G synonymous_variant 0.23
rpsA 1834775 p.Ala412Asn missense_variant 0.21
rpsA 1834780 c.1239A>G synonymous_variant 0.21
rpsA 1834789 c.1248T>C synonymous_variant 0.22
rpsA 1834792 c.1251G>C synonymous_variant 0.19
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517917 c.-198G>T upstream_gene_variant 0.22
kasA 2517965 c.-150C>T upstream_gene_variant 0.17
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2518519 c.405G>C synonymous_variant 0.16
kasA 2518528 c.414C>G synonymous_variant 0.16
kasA 2518534 c.420G>C synonymous_variant 0.16
kasA 2518567 c.453G>C synonymous_variant 0.26
kasA 2518574 p.Ile154Val missense_variant 0.25
kasA 2518579 c.465T>C synonymous_variant 0.23
kasA 2518588 c.474T>C synonymous_variant 0.22
kasA 2518591 c.477G>T synonymous_variant 0.22
kasA 2518606 c.492G>C synonymous_variant 0.23
kasA 2518609 p.Met165Ile missense_variant 0.24
kasA 2518618 c.504G>C synonymous_variant 0.24
kasA 2518636 c.522C>T synonymous_variant 0.25
kasA 2518642 c.528A>G synonymous_variant 0.27
kasA 2518672 c.558G>C synonymous_variant 0.27
kasA 2518678 c.564C>T synonymous_variant 0.26
kasA 2518684 c.570C>G synonymous_variant 0.25
kasA 2518688 p.Val192Phe missense_variant 0.25
kasA 2518702 c.588C>T synonymous_variant 0.25
kasA 2518705 c.591T>G synonymous_variant 0.25
kasA 2518714 c.600A>C synonymous_variant 0.25
kasA 2518723 c.609G>A synonymous_variant 0.2
kasA 2518747 c.633C>G synonymous_variant 0.24
kasA 2518756 c.642G>C synonymous_variant 0.24
kasA 2518768 c.654C>G synonymous_variant 0.21
kasA 2518777 c.663C>T synonymous_variant 0.23
kasA 2518783 c.669T>C synonymous_variant 0.25
kasA 2518792 c.678C>A synonymous_variant 0.21
kasA 2518795 c.681C>G synonymous_variant 0.2
kasA 2518825 c.711T>C synonymous_variant 0.17
kasA 2519048 p.Gly312Ser missense_variant 0.97
ahpC 2726051 c.-142G>A upstream_gene_variant 1.0
folC 2746657 c.942T>C synonymous_variant 0.19
folC 2746663 c.936T>C synonymous_variant 0.19
folC 2746666 c.933C>G synonymous_variant 0.19
folC 2746672 c.927C>T synonymous_variant 0.19
folC 2746677 p.Ser308Ala missense_variant 0.19
folC 2746678 c.921T>G synonymous_variant 0.19
folC 2746687 c.912C>G synonymous_variant 0.17
folC 2746691 p.Val303Ala missense_variant 0.17
folC 2746693 c.906G>T synonymous_variant 0.17
folC 2746708 c.891C>T synonymous_variant 0.16
folC 2746711 c.888A>G synonymous_variant 0.16
folC 2746714 c.885T>C synonymous_variant 0.16
pepQ 2860159 p.Ala87Gly missense_variant 0.21
thyX 3067367 c.579G>C synonymous_variant 0.19
thyX 3067382 c.564C>T synonymous_variant 0.19
thyX 3067412 c.534C>G synonymous_variant 0.21
thyX 3067427 c.519G>C synonymous_variant 0.21
thyX 3067433 c.513C>G synonymous_variant 0.19
thyX 3067439 c.507A>G synonymous_variant 0.23
thyX 3067457 c.489C>G synonymous_variant 0.24
thyX 3067463 p.Ile161Leu missense_variant 0.23
thyX 3067466 c.480G>C synonymous_variant 0.23
thyX 3067469 p.Asn159Ser missense_variant 0.22
thyX 3067475 c.471A>G synonymous_variant 0.28
thyX 3067490 c.456C>G synonymous_variant 0.26
thyX 3067510 c.436C>T synonymous_variant 0.26
thyX 3067515 p.Ser144Thr missense_variant 0.24
thyX 3067530 p.Ala139Ser missense_variant 0.24
thyX 3067545 p.Glu134Ala missense_variant 0.21
thyX 3067549 p.Thr133Ala missense_variant 0.21
thyX 3067556 p.His130Gln missense_variant 0.2
thyX 3067559 p.Arg129Gln missense_variant 0.19
thyX 3067565 p.Asp127Glu missense_variant 0.19
thyX 3067570 p.Ala126Pro missense_variant 0.21
thyX 3067586 c.360C>G synonymous_variant 0.16
thyX 3067661 c.285C>G synonymous_variant 0.15
thyX 3067694 c.252G>C synonymous_variant 0.17
thyX 3067718 c.228C>G synonymous_variant 0.21
thyX 3067721 c.225T>C synonymous_variant 0.2
thyX 3067727 c.219A>C synonymous_variant 0.19
thyX 3067736 c.210C>T synonymous_variant 0.21
thyX 3067739 c.207T>C synonymous_variant 0.22
thyX 3067742 c.204A>G synonymous_variant 0.22
thyX 3067761 p.Arg62Lys missense_variant 0.2
thyX 3067765 p.Leu61Ile missense_variant 0.21
thyX 3067781 c.165C>G synonymous_variant 0.24
thyX 3067793 c.153T>C synonymous_variant 0.24
thyX 3067799 c.147G>A synonymous_variant 0.22
thyX 3067802 c.144C>G synonymous_variant 0.22
thyX 3067811 c.135G>A synonymous_variant 0.17
thyX 3067814 c.132T>C synonymous_variant 0.16
thyX 3067844 c.102G>C synonymous_variant 0.17
thyA 3073874 p.Ile200Val missense_variant 0.17
thyA 3073889 p.Ser195Ala missense_variant 0.23
thyA 3073890 c.580_582delTTGinsCTC synonymous_variant 0.23
thyA 3073898 p.Ala192Ser missense_variant 0.28
thyA 3073917 c.555C>G synonymous_variant 0.26
thyA 3073920 c.552C>G synonymous_variant 0.27
thyA 3073925 c.547T>C synonymous_variant 0.27
thyA 3073959 c.513T>C synonymous_variant 0.26
thyA 3073977 c.495A>G synonymous_variant 0.25
thyA 3073989 c.483T>C synonymous_variant 0.24
thyA 3074001 c.471C>G synonymous_variant 0.2
thyA 3074004 c.468T>C synonymous_variant 0.2
thyA 3074007 c.465C>G synonymous_variant 0.2
thyA 3074010 c.462C>G synonymous_variant 0.21
thyA 3074028 c.444G>C synonymous_variant 0.19
thyA 3074031 c.441T>C synonymous_variant 0.19
thyA 3074037 c.435C>G synonymous_variant 0.19
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fbiD 3339417 c.300A>G synonymous_variant 1.0
fbiD 3339734 p.Ala206Gly missense_variant 0.18
Rv3083 3448714 p.Asp71His missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 0.98
fprA 3474081 c.75C>G synonymous_variant 0.18
fprA 3474088 p.Thr28Gly missense_variant 0.19
fprA 3474091 p.Thr29Ser missense_variant 0.19
fprA 3474099 p.Asp31Glu missense_variant 0.17
fprA 3474100 p.Leu32Ile missense_variant 0.17
fprA 3474108 p.Met34Ile missense_variant 0.19
fprA 3474130 c.124T>C synonymous_variant 0.2
fprA 3474135 c.129G>C synonymous_variant 0.2
fprA 3474138 c.132T>C synonymous_variant 0.19
fprA 3474141 c.135C>G synonymous_variant 0.18
fprA 3474597 c.591C>A synonymous_variant 0.98
fprA 3475159 p.Asn385Asp missense_variant 1.0
whiB7 3568488 c.191delG frameshift_variant 1.0
fbiB 3640557 c.-978T>C upstream_gene_variant 0.96
rpoA 3877613 p.Ile299Val missense_variant 0.21
rpoA 3877656 c.852T>C synonymous_variant 0.2
rpoA 3877668 c.840A>G synonymous_variant 0.2
rpoA 3877677 p.Ala277Ser missense_variant 0.18
rpoA 3877680 c.828G>C synonymous_variant 0.17
rpoA 3877686 c.822A>G synonymous_variant 0.19
rpoA 3877692 c.816G>C synonymous_variant 0.2
rpoA 3877695 c.813C>G synonymous_variant 0.21
rpoA 3877704 c.804G>T synonymous_variant 0.25
rpoA 3877737 c.771G>C synonymous_variant 0.33
rpoA 3877764 c.744C>G synonymous_variant 0.28
rpoA 3877770 c.738A>G synonymous_variant 0.28
rpoA 3877776 c.732T>C synonymous_variant 0.3
rpoA 3877782 c.726T>C synonymous_variant 0.3
rpoA 3877818 c.690A>G synonymous_variant 0.3
rpoA 3877839 c.669G>C synonymous_variant 0.27
rpoA 3877857 c.651G>A synonymous_variant 0.24
rpoA 3877866 c.642G>C synonymous_variant 0.24
rpoA 3877872 c.636C>T synonymous_variant 0.26
rpoA 3877875 c.633T>G synonymous_variant 0.22
rpoA 3877896 c.612G>C synonymous_variant 0.23
rpoA 3877900 p.Ser203Asn missense_variant 0.23
rpoA 3877905 c.603A>G synonymous_variant 0.24
rpoA 3877908 p.Asn200Ser missense_variant 0.24
rpoA 3877920 c.588G>C synonymous_variant 0.27
rpoA 3877962 c.546G>T synonymous_variant 0.27
rpoA 3877986 c.522G>C synonymous_variant 0.28
rpoA 3877989 c.519A>G synonymous_variant 0.28
rpoA 3878001 c.507A>G synonymous_variant 0.3
rpoA 3878022 c.486T>C synonymous_variant 0.35
rpoA 3878028 c.480G>C synonymous_variant 0.35
rpoA 3878031 c.477T>C synonymous_variant 0.36
rpoA 3878046 c.462T>C synonymous_variant 0.36
rpoA 3878049 c.459G>C synonymous_variant 0.37
rpoA 3878055 c.453A>G synonymous_variant 0.39
rpoA 3878061 c.447G>C synonymous_variant 0.39
rpoA 3878067 c.441C>G synonymous_variant 0.4
rpoA 3878070 c.438T>C synonymous_variant 0.42
rpoA 3878076 c.432C>T synonymous_variant 0.45
rpoA 3878082 c.426T>C synonymous_variant 0.48
rpoA 3878094 c.414C>G synonymous_variant 0.51
rpoA 3878103 c.405A>G synonymous_variant 0.48
rpoA 3878106 c.402G>C synonymous_variant 0.48
rpoA 3878118 c.390T>C synonymous_variant 0.47
rpoA 3878124 c.384G>C synonymous_variant 0.47
rpoA 3878130 c.378C>G synonymous_variant 0.46
rpoA 3878141 p.Met123Leu missense_variant 0.46
rpoA 3878143 p.Gly122Asp missense_variant 0.45
rpoA 3878163 c.345C>T synonymous_variant 0.4
rpoA 3878169 c.339G>C synonymous_variant 0.39
rpoA 3878184 c.324C>G synonymous_variant 0.37
rpoA 3878187 c.321C>G synonymous_variant 0.34
rpoA 3878193 c.315T>C synonymous_variant 0.33
rpoA 3878205 c.303T>C synonymous_variant 0.32
rpoA 3878217 c.291A>G synonymous_variant 0.32
rpoA 3878232 c.276G>C synonymous_variant 0.28
rpoA 3878247 c.261G>C synonymous_variant 0.25
rpoA 3878271 c.237T>C synonymous_variant 0.23
rpoA 3878276 c.232C>T synonymous_variant 0.24
rpoA 3878284 p.Glu75Ala missense_variant 0.24
rpoA 3878292 c.216T>C synonymous_variant 0.25
rpoA 3878298 c.210A>G synonymous_variant 0.27
rpoA 3878304 c.204G>T synonymous_variant 0.28
rpoA 3878307 c.201C>G synonymous_variant 0.29
rpoA 3878313 c.195G>C synonymous_variant 0.29
rpoA 3878322 c.186A>G synonymous_variant 0.37
rpoA 3878331 c.177A>G synonymous_variant 0.38
rpoA 3878334 c.174T>C synonymous_variant 0.36
rpoA 3878337 c.171T>C synonymous_variant 0.37
rpoA 3878346 c.162T>C synonymous_variant 0.38
rpoA 3878361 c.147G>C synonymous_variant 0.33
rpoA 3878364 c.144A>T synonymous_variant 0.33
rpoA 3878367 c.141C>G synonymous_variant 0.31
rpoA 3878376 c.132G>C synonymous_variant 0.27
rpoA 3878385 c.123C>G synonymous_variant 0.28
rpoA 3878388 c.120C>G synonymous_variant 0.29
rpoA 3878391 c.117T>C synonymous_variant 0.3
rpoA 3878396 c.112C>T synonymous_variant 0.3
rpoA 3878400 c.108T>C synonymous_variant 0.3
rpoA 3878415 c.93C>T synonymous_variant 0.3
rpoA 3878436 c.72A>G synonymous_variant 0.36
rpoA 3878442 c.66G>C synonymous_variant 0.36
rpoA 3878454 c.54A>C synonymous_variant 0.37
rpoA 3878458 p.Asn17Ser missense_variant 0.32
rpoA 3878472 p.Asp12Glu missense_variant 0.17
rpoA 3878665 c.-158A>G upstream_gene_variant 0.15
rpoA 3878683 c.-176G>C upstream_gene_variant 0.19
rpoA 3878698 c.-191A>G upstream_gene_variant 0.23
rpoA 3878701 c.-194C>G upstream_gene_variant 0.23
clpC1 4038212 c.2493T>C synonymous_variant 0.16
clpC1 4038239 c.2466T>A synonymous_variant 0.2
clpC1 4038255 p.Val817Lys missense_variant 0.17
clpC1 4038271 p.Pro812Ser missense_variant 0.18
clpC1 4038272 p.Gly811Ser missense_variant 0.18
clpC1 4038278 c.2427T>C synonymous_variant 0.17
clpC1 4038293 c.2412G>C synonymous_variant 0.18
clpC1 4038302 c.2403C>G synonymous_variant 0.2
clpC1 4038308 c.2397G>C synonymous_variant 0.19
clpC1 4038314 c.2391T>C synonymous_variant 0.18
clpC1 4038320 c.2385G>C synonymous_variant 0.18
clpC1 4038347 c.2358G>C synonymous_variant 0.18
clpC1 4038356 c.2349T>C synonymous_variant 0.17
clpC1 4038368 c.2337T>C synonymous_variant 0.18
clpC1 4038392 c.2313C>T synonymous_variant 0.17
clpC1 4038398 c.2307G>T synonymous_variant 0.16
clpC1 4038403 c.2302T>C synonymous_variant 0.16
clpC1 4038419 c.2286T>C synonymous_variant 0.17
clpC1 4038433 c.2272C>T synonymous_variant 0.16
clpC1 4038434 c.2271G>A synonymous_variant 0.16
clpC1 4038461 c.2244G>T synonymous_variant 0.16
clpC1 4038596 c.2109A>G synonymous_variant 0.22
clpC1 4038623 c.2082A>G synonymous_variant 0.18
clpC1 4038640 p.Asp689Asn missense_variant 0.22
clpC1 4038658 p.Lys683Gln missense_variant 0.23
clpC1 4038661 p.Ser682Thr missense_variant 0.23
clpC1 4038662 c.2043T>C synonymous_variant 0.24
clpC1 4038671 c.2034T>C synonymous_variant 0.27
clpC1 4038674 c.2031C>G synonymous_variant 0.27
clpC1 4038683 c.2022T>G synonymous_variant 0.25
clpC1 4038695 c.2010C>G synonymous_variant 0.27
clpC1 4038701 c.2004G>C synonymous_variant 0.26
clpC1 4038704 c.2001T>C synonymous_variant 0.27
clpC1 4038710 c.1995G>C synonymous_variant 0.28
clpC1 4038713 c.1992T>C synonymous_variant 0.27
clpC1 4038740 c.1965G>C synonymous_variant 0.24
clpC1 4038752 c.1953G>A synonymous_variant 0.23
clpC1 4038755 c.1950G>T synonymous_variant 0.23
clpC1 4038773 c.1932T>C synonymous_variant 0.24
clpC1 4038782 c.1923G>T synonymous_variant 0.22
clpC1 4038790 c.1915C>T synonymous_variant 0.21
clpC1 4038878 c.1827A>G synonymous_variant 0.2
clpC1 4038881 c.1824C>T synonymous_variant 0.2
clpC1 4038884 c.1821C>T synonymous_variant 0.19
clpC1 4038908 c.1797C>G synonymous_variant 0.18
clpC1 4038911 c.1794G>A synonymous_variant 0.17
clpC1 4038914 c.1791G>C synonymous_variant 0.17
clpC1 4038917 c.1788C>T synonymous_variant 0.17
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.17
clpC1 4038953 c.1752A>G synonymous_variant 0.19
clpC1 4038965 c.1740T>C synonymous_variant 0.19
clpC1 4038971 c.1734T>C synonymous_variant 0.16
clpC1 4038974 c.1731T>C synonymous_variant 0.17
clpC1 4038989 c.1716T>C synonymous_variant 0.19
clpC1 4038997 c.1708T>C synonymous_variant 0.2
clpC1 4039004 c.1701C>G synonymous_variant 0.19
clpC1 4039022 c.1683A>G synonymous_variant 0.19
clpC1 4039064 c.1641C>T synonymous_variant 0.2
clpC1 4039103 c.1602T>C synonymous_variant 0.17
clpC1 4039106 c.1599G>C synonymous_variant 0.17
clpC1 4039112 c.1593C>G synonymous_variant 0.19
clpC1 4039121 c.1584T>C synonymous_variant 0.2
clpC1 4039130 c.1575C>G synonymous_variant 0.2
clpC1 4039136 c.1569C>T synonymous_variant 0.2
clpC1 4039142 c.1563A>G synonymous_variant 0.17
clpC1 4039145 c.1560G>C synonymous_variant 0.17
clpC1 4039169 p.Glu512Asp missense_variant 0.17
clpC1 4039286 c.1419T>C synonymous_variant 0.16
clpC1 4039339 p.Thr456Pro missense_variant 0.16
clpC1 4039346 c.1359G>C synonymous_variant 0.17
clpC1 4039364 c.1341C>G synonymous_variant 0.18
clpC1 4039430 c.1275T>C synonymous_variant 0.18
clpC1 4039442 c.1263A>G synonymous_variant 0.16
clpC1 4039559 c.1146C>G synonymous_variant 0.17
clpC1 4039574 p.Ala377Gly missense_variant 0.17
clpC1 4039577 c.1128T>C synonymous_variant 0.19
clpC1 4039586 c.1119G>C synonymous_variant 0.22
clpC1 4039601 c.1104G>A synonymous_variant 0.22
clpC1 4039610 c.1095G>C synonymous_variant 0.21
clpC1 4039616 c.1089G>C synonymous_variant 0.24
clpC1 4039622 c.1083C>T synonymous_variant 0.24
clpC1 4039649 c.1056G>C synonymous_variant 0.19
clpC1 4039661 c.1044T>C synonymous_variant 0.21
clpC1 4039925 c.780C>T synonymous_variant 0.17
clpC1 4039931 c.774T>C synonymous_variant 0.18
clpC1 4039934 c.771G>T synonymous_variant 0.18
clpC1 4039946 c.759A>T synonymous_variant 0.17
clpC1 4039952 c.753T>C synonymous_variant 0.19
clpC1 4039991 c.714G>C synonymous_variant 0.17
clpC1 4039996 p.Glu237Gln missense_variant 0.17
clpC1 4040009 c.696C>G synonymous_variant 0.18
clpC1 4040021 c.684A>C synonymous_variant 0.18
clpC1 4040024 c.681A>G synonymous_variant 0.16
clpC1 4040030 c.675C>G synonymous_variant 0.16
clpC1 4040033 c.672G>C synonymous_variant 0.18
clpC1 4040042 c.663C>T synonymous_variant 0.19
clpC1 4040249 c.456A>G synonymous_variant 0.19
clpC1 4040252 c.453C>G synonymous_variant 0.2
clpC1 4040300 c.405C>G synonymous_variant 0.18
clpC1 4040369 c.336C>G synonymous_variant 0.15
clpC1 4040387 c.318A>G synonymous_variant 0.21
clpC1 4040393 c.312G>C synonymous_variant 0.18
clpC1 4040411 c.294T>C synonymous_variant 0.18
clpC1 4040517 p.Val63Ala missense_variant 0.92
embC 4240671 p.Thr270Ile missense_variant 1.0
embC 4240780 c.918T>C synonymous_variant 0.2
embC 4240783 c.921G>C synonymous_variant 0.19
embC 4240789 c.927T>C synonymous_variant 0.19
embC 4240801 c.939C>T synonymous_variant 0.21
embC 4240813 p.Phe317Leu missense_variant 0.23
embC 4240819 c.957A>G synonymous_variant 0.22
embC 4240822 c.960C>G synonymous_variant 0.22
embC 4240831 c.969T>G synonymous_variant 0.24
embC 4240867 c.1005T>G synonymous_variant 0.25
embC 4240870 c.1008T>C synonymous_variant 0.23
embC 4240873 c.1011C>G synonymous_variant 0.22
embC 4240880 p.Ala340Thr missense_variant 0.22
embC 4240885 c.1023T>C synonymous_variant 0.21
embC 4240886 p.Ile342Val missense_variant 0.21
embC 4240897 c.1035C>G synonymous_variant 0.17
embC 4240900 c.1038A>G synonymous_variant 0.17
embC 4241042 p.Asn394Asp missense_variant 0.91
embC 4241071 c.1209C>G synonymous_variant 0.15
embC 4241104 c.1242G>A synonymous_variant 0.16
embC 4241107 c.1245G>C synonymous_variant 0.16
embC 4241140 c.1278A>G synonymous_variant 0.16
embA 4242643 c.-590C>T upstream_gene_variant 0.99
embA 4243580 c.348G>A synonymous_variant 1.0
embA 4244420 c.1188G>C synonymous_variant 0.94
embB 4245764 c.-750G>C upstream_gene_variant 0.16
embA 4245772 p.Asn847Thr missense_variant 0.17
embB 4245785 c.-729G>C upstream_gene_variant 0.17
embA 4245852 p.Ala874Ser missense_variant 0.15
embA 4245969 p.Pro913Ser missense_variant 1.0
embA 4246299 p.Ser1023Ala missense_variant 0.16
embA 4246305 p.Ser1025Glu missense_variant 0.16
embB 4246316 c.-198T>G upstream_gene_variant 0.17
embB 4246536 p.Arg8Pro missense_variant 0.4
embB 4246584 p.Arg24Pro missense_variant 0.4
embB 4247485 c.972C>T synonymous_variant 0.17
embB 4247491 c.978G>C synonymous_variant 0.18
embB 4247497 c.984T>C synonymous_variant 0.21
embB 4247500 c.987C>G synonymous_variant 0.2
embB 4247512 c.999T>C synonymous_variant 0.19
embB 4247544 p.Ser344Thr missense_variant 0.15
embB 4247554 c.1041T>C synonymous_variant 0.15
embB 4247578 c.1065G>A synonymous_variant 0.92
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4247776 c.1263G>C synonymous_variant 0.17
embB 4247785 c.1272G>C synonymous_variant 0.17
embB 4247797 c.1284C>G synonymous_variant 0.17
embB 4247800 c.1287A>G synonymous_variant 0.17
embB 4247803 c.1290G>C synonymous_variant 0.18
embB 4247815 c.1302C>G synonymous_variant 0.17
embB 4247819 p.Val436Ile missense_variant 0.17
embB 4247827 c.1314C>G synonymous_variant 0.17
embB 4247830 c.1317A>G synonymous_variant 0.17
embB 4247842 c.1329T>C synonymous_variant 0.16
embB 4247881 c.1368G>C synonymous_variant 0.21
embB 4247887 c.1374C>T synonymous_variant 0.23
embB 4247893 c.1380C>T synonymous_variant 0.23
embB 4247899 p.Met462Ile missense_variant 0.23
embB 4247908 c.1395C>T synonymous_variant 0.17
embB 4247909 c.1396T>C synonymous_variant 0.17
embB 4247914 c.1401G>C synonymous_variant 0.18
embB 4247917 c.1404C>T synonymous_variant 0.18
embB 4247923 c.1410T>C synonymous_variant 0.18
embB 4247940 p.Leu476Trp missense_variant 0.21
embB 4247945 c.1432T>C synonymous_variant 0.21
embB 4247951 p.Ser480Ala missense_variant 0.24
embB 4247956 c.1443G>C synonymous_variant 0.2
embB 4247965 c.1452C>G synonymous_variant 0.22
embB 4247968 c.1455C>G synonymous_variant 0.22
embB 4248007 c.1494C>T synonymous_variant 0.25
embB 4248019 c.1506G>A synonymous_variant 0.19
embB 4248070 c.1557T>C synonymous_variant 0.16
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
whiB6 4338361 p.Arg54Gln missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
whiB6 4338603 c.-82C>T upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407873 c.330G>T synonymous_variant 1.0