Rv1221 - c.513C>G
Drug resistance types
11 Sensitive
11 RR-TB
55 HR-TB
15 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage9 | 1 |
| lineage4.9 | 67 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;lineage4.9 | 8 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1 | 8 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.2.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| 1 | |
| lineage4.1.1.2 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 134 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR971389 | Other | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4796254 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR4797474 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4798504 | RR-TB | lineage3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
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