Run ID: SRR23961559
Sample name:
Date: 2024-04-15T10:56:29.158989
Number of reads: 3768453
Percentage reads mapped: 65.87
Median coverage: 19.0
Strain: La1.7;lineage4.2
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage4.2 | Euro-American | None | 0.06 |
La1.7 | M.bovis | None | 0.99 |
La1 | M.bovis | None | 0.83 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | embB | p.His312Arg | Mutation from literature | |
p.Asn399Asp | Mutation from literature | |||
pyrazinamide | pncA | p.His57Asp | Assoc w R | |
streptomycin | rrs | n.462C>T | Uncertain significance | Mutation from literature |
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | fgd1 | c.409_411delGGGinsCA | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
c.421_423delCAGinsGA | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
fbiC | c.859_861delATCinsGG | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |
c.916_918delTTCinsGG | Assoc w R - Interim | Confers DLM-PMD cross-resistance | ||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
fgd1 | 491191 | c.409_411delGGGinsCA | frameshift_variant&missense_variant | 0.38 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fgd1 | 491203 | c.421_423delCAGinsGA | frameshift_variant&missense_variant | 0.4 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1303789 | c.859_861delATCinsGG | frameshift_variant&missense_variant | 0.57 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
fbiC | 1303846 | c.916_918delTTCinsGG | frameshift_variant&missense_variant | 0.44 | pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 0.79 | streptomycin | Uncertain significance | Mutation from literature |
pncA | 2289073 | p.His57Asp | missense_variant | 1.0 | pyrazinamide | Assoc w R | |
embB | 4247448 | p.His312Arg | missense_variant | 0.54 | ethambutol | Mutation from literature | |
embB | 4247708 | p.Asn399Asp | missense_variant | 0.29 | ethambutol | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 467 | p.His156Arg | missense_variant | 1.0 | isoniazid | Not assoc w R |
dnaA | 741 | c.741T>C | synonymous_variant | 0.61 | isoniazid | Not assoc w R - Interim |
dnaA | 750 | c.750C>G | synonymous_variant | 0.53 | isoniazid | |
dnaA | 756 | c.756T>C | synonymous_variant | 0.64 | isoniazid | |
dnaA | 771 | c.771A>G | synonymous_variant | 0.67 | isoniazid | |
dnaA | 777 | c.777A>G | synonymous_variant | 0.68 | isoniazid | |
dnaA | 786 | c.786C>T | synonymous_variant | 0.68 | isoniazid | |
dnaA | 795 | c.795A>C | synonymous_variant | 0.67 | isoniazid | Not assoc w R - Interim |
dnaA | 805 | c.805T>C | synonymous_variant | 0.71 | isoniazid | |
dnaA | 813 | c.813C>T | synonymous_variant | 0.72 | isoniazid | |
dnaA | 819 | c.819C>T | synonymous_variant | 0.72 | isoniazid | |
dnaA | 822 | c.822A>G | synonymous_variant | 0.72 | isoniazid | |
dnaA | 828 | c.828T>C | synonymous_variant | 0.72 | isoniazid | Not assoc w R - Interim |
dnaA | 831 | c.831A>G | synonymous_variant | 0.72 | isoniazid | |
dnaA | 837 | c.837A>G | synonymous_variant | 0.7 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.68 | isoniazid | |
dnaA | 846 | c.846T>C | synonymous_variant | 0.69 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 0.69 | isoniazid | |
dnaA | 852 | c.852G>A | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 876 | c.876C>G | synonymous_variant | 0.41 | isoniazid | |
dnaA | 885 | c.885T>C | synonymous_variant | 0.63 | isoniazid | |
dnaA | 1077 | c.1077A>G | synonymous_variant | 0.33 | isoniazid | |
dnaA | 1080 | c.1080C>G | synonymous_variant | 0.38 | isoniazid | |
dnaA | 1092 | c.1092T>C | synonymous_variant | 0.54 | isoniazid | Not assoc w R - Interim |
dnaA | 1104 | c.1104T>C | synonymous_variant | 0.55 | isoniazid | |
dnaA | 1110 | c.1110T>A | synonymous_variant | 0.5 | isoniazid | |
dnaA | 1113 | c.1113A>G | synonymous_variant | 0.55 | isoniazid | |
dnaA | 1119 | c.1119G>A | synonymous_variant | 0.56 | isoniazid | |
dnaA | 1134 | c.1134G>T | synonymous_variant | 0.4 | isoniazid | |
dnaA | 1137 | c.1137C>T | synonymous_variant | 0.45 | isoniazid | Not assoc w R - Interim |
dnaA | 1140 | c.1140C>G | synonymous_variant | 0.4 | isoniazid | |
dnaA | 1149 | c.1149C>G | synonymous_variant | 0.53 | isoniazid | Not assoc w R - Interim |
dnaA | 1152 | c.1152A>G | synonymous_variant | 0.53 | isoniazid | |
dnaA | 1153 | c.1153T>C | synonymous_variant | 0.54 | isoniazid | |
dnaA | 1161 | c.1161A>G | synonymous_variant | 0.39 | isoniazid | |
dnaA | 1164 | c.1164A>G | synonymous_variant | 0.47 | isoniazid | |
dnaA | 1167 | c.1167A>G | synonymous_variant | 0.59 | isoniazid | Not assoc w R - Interim |
dnaA | 1176 | c.1176A>G | synonymous_variant | 0.62 | isoniazid | |
dnaA | 1197 | c.1197T>C | synonymous_variant | 0.58 | isoniazid | Not assoc w R - Interim |
dnaA | 1218 | c.1218C>G | synonymous_variant | 0.36 | isoniazid | |
dnaA | 1220 | p.Asn407Ser | missense_variant | 0.62 | isoniazid | |
dnaA | 1230 | c.1230A>G | synonymous_variant | 0.62 | isoniazid | |
dnaA | 1242 | c.1242G>C | synonymous_variant | 0.58 | isoniazid | |
dnaA | 1245 | c.1245G>C | synonymous_variant | 0.55 | isoniazid | Not assoc w R - Interim |
dnaA | 1254 | c.1254T>C | synonymous_variant | 0.52 | isoniazid | |
dnaA | 1278 | c.1278T>C | synonymous_variant | 0.48 | isoniazid | |
dnaA | 1281 | c.1281C>G | synonymous_variant | 0.46 | isoniazid | |
dnaA | 1284 | c.1284C>G | synonymous_variant | 0.54 | isoniazid | |
dnaA | 1293 | c.1293T>C | synonymous_variant | 0.59 | isoniazid | |
dnaA | 1299 | c.1299G>C | synonymous_variant | 0.59 | isoniazid | Not assoc w R - Interim |
dnaA | 1305 | c.1305C>T | synonymous_variant | 0.54 | isoniazid | |
dnaA | 1311 | c.1311C>T | synonymous_variant | 0.54 | isoniazid | Not assoc w R - Interim |
dnaA | 1317 | c.1317A>G | synonymous_variant | 0.58 | isoniazid | |
dnaA | 1338 | c.1338T>C | synonymous_variant | 0.5 | isoniazid | |
dnaA | 1365 | c.1365C>T | synonymous_variant | 0.45 | isoniazid | |
gyrB | 5267 | p.Asp10Asn | missense_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 5282 | c.43_45delGCGinsTA | frameshift_variant&stop_gained | 0.35 | levofloxacin | Uncertain significance |
moxifloxacin | ||||||
gyrB | 5285 | c.46_48delTCTinsGG | frameshift_variant&missense_variant | 0.35 | levofloxacin | Uncertain significance |
moxifloxacin | ||||||
gyrB | 5294 | c.55_57delATTinsGG | frameshift_variant&missense_variant | 0.38 | levofloxacin | Uncertain significance |
moxifloxacin | ||||||
gyrB | 5341 | c.102T>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 5344 | c.105C>G | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 5347 | c.108G>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 5359 | c.120C>T | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 5363 | c.124_126delTTAinsCG | frameshift_variant&missense_variant | 0.5 | levofloxacin | Uncertain significance |
moxifloxacin | ||||||
gyrB | 5371 | c.132T>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 5377 | c.138T>C | synonymous_variant | 0.55 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 5752 | c.513G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6215 | p.Ser326Thr | missense_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6223 | c.984G>C | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6238 | c.999G>A | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6259 | p.Asp340Glu | missense_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.72 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.69 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6289 | c.1050C>T | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6292 | c.1053G>T | synonymous_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6295 | c.1056A>G | synonymous_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6301 | c.1062G>T | synonymous_variant | 0.39 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6307 | c.1068T>G | synonymous_variant | 0.69 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6313 | c.-989C>A | upstream_gene_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6319 | c.1080G>C | synonymous_variant | 0.71 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 6346 | c.-956C>A | upstream_gene_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6352 | c.1113C>G | synonymous_variant | 0.6 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6361 | c.-941G>A | upstream_gene_variant | 0.76 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6362 | c.-940T>C | upstream_gene_variant | 0.76 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6376 | c.-926G>A | upstream_gene_variant | 0.74 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6379 | c.-923C>G | upstream_gene_variant | 0.71 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6382 | c.-920A>G | upstream_gene_variant | 0.74 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6388 | c.-914T>C | upstream_gene_variant | 0.74 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6403 | c.-899T>C | upstream_gene_variant | 0.74 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6409 | c.-893A>G | upstream_gene_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6412 | c.-890G>A | upstream_gene_variant | 0.67 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6415 | c.-887G>C | upstream_gene_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6418 | c.-884C>G | upstream_gene_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6427 | c.-875T>C | upstream_gene_variant | 0.68 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6430 | c.-872A>G | upstream_gene_variant | 0.71 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6439 | c.1200C>G | synonymous_variant | 0.81 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6440 | p.Thr401Ala | missense_variant | 0.81 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6448 | c.-854G>C | upstream_gene_variant | 0.8 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6454 | c.-848C>G | upstream_gene_variant | 0.79 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6457 | c.-845T>G | upstream_gene_variant | 0.75 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6469 | c.-833T>G | upstream_gene_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 0.53 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6751 | c.-551G>C | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.64 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6763 | c.1524G>C | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6775 | c.1536G>C | synonymous_variant | 0.65 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6778 | c.-524C>A | upstream_gene_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6784 | c.-518C>T | upstream_gene_variant | 0.38 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6793 | c.1554T>C | synonymous_variant | 0.63 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6797 | p.Gly520Thr | missense_variant | 0.59 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6811 | c.1572C>T | synonymous_variant | 0.62 | levofloxacin | |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6832 | c.1593C>T | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6841 | c.1602T>C | synonymous_variant | 0.63 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6856 | c.1617T>C | synonymous_variant | 0.61 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6859 | c.1620T>C | synonymous_variant | 0.66 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6862 | c.1623C>G | synonymous_variant | 0.66 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6866 | c.-436C>T | upstream_gene_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6881 | c.1642T>C | synonymous_variant | 0.59 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 7093 | c.1854T>C | synonymous_variant | 0.58 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7108 | c.-194G>A | upstream_gene_variant | 0.6 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7114 | c.-188C>A | upstream_gene_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7124 | c.-178_-176delTCGinsAGC | upstream_gene_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7129 | c.-173T>C | upstream_gene_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7132 | c.-170T>G | upstream_gene_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7144 | c.-158A>G | upstream_gene_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7147 | c.-155G>C | upstream_gene_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7150 | c.-152G>C | upstream_gene_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7168 | c.-134C>G | upstream_gene_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7178 | c.-124T>C | upstream_gene_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7186 | c.1947C>G | synonymous_variant | 0.63 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7207 | c.-95C>G | upstream_gene_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7213 | c.-89G>C | upstream_gene_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7216 | c.1977G>C | synonymous_variant | 0.56 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7307 | c.6A>T | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7313 | c.12G>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7317 | c.16T>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7324 | c.23_24insAGG | disruptive_inframe_insertion | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7334 | c.33G>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7335 | p.Leu12Val | missense_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7347 | p.Glu16Gln | missense_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7355 | c.54T>G | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7361 | c.60C>T | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7391 | c.90C>T | synonymous_variant | 0.53 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7394 | c.93T>C | synonymous_variant | 0.53 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7406 | c.105G>C | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7418 | c.117C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7433 | c.132G>A | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7442 | c.141G>T | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7451 | c.150C>G | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7457 | c.156T>C | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7475 | c.174A>G | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7484 | c.183T>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7490 | c.189C>G | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7523 | c.222C>G | synonymous_variant | 0.47 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7532 | c.231T>G | synonymous_variant | 0.43 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.43 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7565 | c.264C>T | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7587 | c.286C>T | synonymous_variant | 0.32 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7601 | c.300C>G | synonymous_variant | 0.61 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>G | synonymous_variant | 0.62 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7728 | c.427_429delAGGinsCC | frameshift_variant&missense_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7748 | c.447A>G | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7760 | c.459C>A | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7763 | c.462T>C | synonymous_variant | 0.55 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7775 | c.474C>T | synonymous_variant | 0.54 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7778 | c.477G>T | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7784 | c.483A>G | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7787 | c.486G>A | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7793 | c.492G>C | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 0.52 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7811 | c.510C>T | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7832 | c.531G>A | synonymous_variant | 0.52 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7835 | c.534A>C | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7859 | c.558A>G | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7865 | c.564T>C | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8111 | c.810G>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8121 | c.820T>C | synonymous_variant | 0.53 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8135 | c.834C>G | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8156 | c.855T>C | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8168 | c.867A>G | synonymous_variant | 0.57 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8177 | c.876A>C | synonymous_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8189 | c.888G>C | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8198 | c.897T>C | synonymous_variant | 0.66 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8207 | c.906T>C | synonymous_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8210 | c.909G>A | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8219 | c.918T>C | synonymous_variant | 0.61 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8222 | c.921C>T | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8225 | c.924T>C | synonymous_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8228 | c.927G>T | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8235 | c.934_936delTTAinsCG | frameshift_variant&missense_variant | 0.6 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8246 | c.945C>G | synonymous_variant | 0.34 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8247 | c.946_948delATCinsGG | frameshift_variant&missense_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8264 | c.963T>C | synonymous_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8267 | c.966G>C | synonymous_variant | 0.62 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8283 | c.982_984delATCinsCG | frameshift_variant&missense_variant | 0.63 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8288 | c.987T>C | synonymous_variant | 0.63 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8294 | c.993T>C | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8330 | c.1029C>G | synonymous_variant | 0.58 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8339 | c.1038A>C | synonymous_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8340 | p.Ala347Ser | missense_variant | 0.66 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8375 | c.1074G>C | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8382 | p.Leu361Met | missense_variant | 0.66 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8393 | c.1092T>C | synonymous_variant | 0.6 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.57 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8401 | p.Asp367Ala | missense_variant | 0.6 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8405 | c.1104C>T | synonymous_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.61 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.6 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.55 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8459 | c.1158G>A | synonymous_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8462 | c.1161A>C | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8465 | c.1164C>G | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8472 | c.1171C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8477 | c.1176C>A | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8481 | c.1180C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8504 | c.1203G>C | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8513 | c.1212C>G | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8516 | c.1215T>C | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8519 | c.1218A>C | synonymous_variant | 0.44 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8528 | c.1227G>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8543 | c.1242C>G | synonymous_variant | 0.59 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8546 | c.1245T>C | synonymous_variant | 0.58 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8552 | c.1251C>G | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8561 | c.1260A>C | synonymous_variant | 0.55 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8603 | c.1302A>G | synonymous_variant | 0.52 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8609 | c.1308G>C | synonymous_variant | 0.52 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8619 | c.1318T>C | synonymous_variant | 0.58 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8624 | c.1323G>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8627 | c.1326C>G | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8628 | c.1327C>T | synonymous_variant | 0.45 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8636 | c.1335A>C | synonymous_variant | 0.55 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8642 | c.1341A>G | synonymous_variant | 0.59 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8684 | c.1383G>A | synonymous_variant | 0.41 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8690 | c.1389C>G | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8693 | c.1392T>C | synonymous_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8711 | c.1410A>C | synonymous_variant | 0.73 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8714 | c.1413A>G | synonymous_variant | 0.71 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8729 | c.1428T>C | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8730 | p.Gly477Gln | missense_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8740 | p.Arg480His | missense_variant | 0.73 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8747 | c.1446A>G | synonymous_variant | 0.73 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8756 | c.1455A>G | synonymous_variant | 0.6 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8762 | c.1461G>C | synonymous_variant | 0.74 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 0.74 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8780 | p.Asp493Glu | missense_variant | 0.79 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8786 | c.1485T>C | synonymous_variant | 0.64 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8801 | c.1500G>C | synonymous_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8810 | c.1509A>C | synonymous_variant | 0.65 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8818 | p.Ser506Asn | missense_variant | 0.68 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8828 | c.1527T>C | synonymous_variant | 0.57 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8829 | c.1528T>C | synonymous_variant | 0.6 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8852 | c.1551T>C | synonymous_variant | 0.76 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8858 | c.1557T>C | synonymous_variant | 0.71 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8867 | c.1566A>G | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8882 | c.1581G>A | synonymous_variant | 0.74 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.72 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.73 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8906 | c.1605C>A | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8918 | c.1617C>T | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.68 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8945 | c.1644G>C | synonymous_variant | 0.69 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8946 | c.1645_1647delTTGinsCC | frameshift_variant&missense_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8966 | c.1665C>G | synonymous_variant | 0.67 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8967 | p.Ala556Arg | missense_variant | 0.67 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8987 | c.1686C>G | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8990 | c.1689C>G | synonymous_variant | 0.69 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8996 | c.1695T>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.64 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9017 | c.1716C>G | synonymous_variant | 0.52 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9023 | c.1722A>C | synonymous_variant | 0.68 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9026 | c.1725G>C | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9029 | c.1728T>G | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9035 | c.1734G>C | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9050 | p.Asp583Glu | missense_variant | 0.45 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9065 | c.1764C>G | synonymous_variant | 0.36 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9066 | c.1765C>A | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9071 | c.1770G>C | synonymous_variant | 0.6 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9080 | c.1779G>T | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9089 | c.1788G>C | synonymous_variant | 0.64 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9099 | c.1798_1800delTTAinsCG | frameshift_variant&missense_variant | 0.64 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9128 | c.1827C>G | synonymous_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9147 | p.Gly616Ser | missense_variant | 0.49 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9153 | p.Thr618Glu | missense_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9179 | c.1878C>G | synonymous_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9182 | c.1881T>C | synonymous_variant | 0.47 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9191 | c.1890G>C | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9197 | c.1896G>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9200 | c.1899A>G | synonymous_variant | 0.49 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9208 | p.Lys636Arg | missense_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9217 | p.Asp639Ala | missense_variant | 0.47 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9230 | c.1929T>C | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9252 | p.Val651Ile | missense_variant | 0.39 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9266 | c.1965C>T | synonymous_variant | 0.4 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9268 | p.Asn656Ser | missense_variant | 0.57 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9276 | c.1975C>T | synonymous_variant | 0.38 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9284 | c.1983T>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9287 | c.1986G>C | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9290 | c.1989G>C | synonymous_variant | 0.41 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9291 | c.1990C>T | synonymous_variant | 0.42 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9296 | c.1995T>C | synonymous_variant | 0.59 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9300 | p.Ala667Ser | missense_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9308 | p.Asp669Glu | missense_variant | 0.46 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9318 | c.2017C>T | synonymous_variant | 0.5 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 9323 | c.2022C>G | synonymous_variant | 0.51 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9341 | c.2040C>G | synonymous_variant | 0.53 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9365 | c.2064G>A | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9374 | c.2073G>C | synonymous_variant | 0.47 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9377 | c.2076A>G | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9383 | c.2082T>A | synonymous_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9386 | c.2085T>C | synonymous_variant | 0.46 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9395 | c.2094G>C | synonymous_variant | 0.44 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9398 | c.2097T>C | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9419 | c.2118T>C | synonymous_variant | 0.49 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9421 | p.Ile707Thr | missense_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9429 | p.Arg710Tyr | missense_variant | 0.48 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9435 | c.2134C>T | synonymous_variant | 0.5 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9443 | c.2142G>C | synonymous_variant | 0.56 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9452 | c.2151G>C | synonymous_variant | 0.57 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9455 | c.2154T>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9458 | c.2157A>G | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9482 | c.2181G>C | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9485 | c.2184A>C | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9488 | c.2187G>C | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9491 | c.2190C>G | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9494 | c.2193T>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9497 | c.2196G>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9500 | c.2199A>G | synonymous_variant | 0.58 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9503 | c.2202T>C | synonymous_variant | 0.58 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9506 | c.2205C>G | synonymous_variant | 0.54 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9518 | c.2217A>G | synonymous_variant | 0.7 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9527 | c.2226A>G | synonymous_variant | 0.71 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9542 | c.2241T>C | synonymous_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9545 | c.2244A>G | synonymous_variant | 0.62 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9551 | c.2250G>T | synonymous_variant | 0.56 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9560 | c.2259C>G | synonymous_variant | 0.48 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9566 | c.2265C>T | synonymous_variant | 0.45 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9578 | c.2277C>T | synonymous_variant | 0.52 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9585 | c.2284T>C | synonymous_variant | 0.43 | levofloxacin | |
moxifloxacin | ||||||
Rv0010c | 13197 | p.Thr121Ser | missense_variant | 1.0 | isoniazid | Not assoc w R |
Rv0010c | 13228 | c.330delG | frameshift_variant | 1.0 | isoniazid | Uncertain significance |
fgd1 | 491121 | c.339A>G | synonymous_variant | 0.32 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491127 | c.345C>G | synonymous_variant | 0.35 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491137 | p.Glu119Gln | missense_variant | 0.42 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491144 | p.Ala121Asp | missense_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491151 | c.369G>C | synonymous_variant | 0.38 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491166 | c.384G>T | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491181 | c.399T>C | synonymous_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491196 | c.414A>G | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491202 | c.420G>C | synonymous_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491212 | p.Ser144Arg | missense_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491217 | c.435T>C | synonymous_variant | 0.4 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491220 | c.438C>T | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491232 | c.450T>C | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491241 | c.459C>T | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491244 | c.462T>C | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491265 | c.483G>C | synonymous_variant | 0.38 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491268 | c.486C>T | synonymous_variant | 0.38 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491277 | c.495G>C | synonymous_variant | 0.36 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491283 | p.Asp167Glu | missense_variant | 0.35 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 | clofazimine | Not assoc w R |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
ccsA | 619504 | c.-387G>A | upstream_gene_variant | 0.38 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619507 | c.-384A>G | upstream_gene_variant | 0.41 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619528 | c.-363C>G | upstream_gene_variant | 0.46 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619531 | c.-360T>C | upstream_gene_variant | 0.44 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619535 | c.-356_-354delCAAinsGCC | upstream_gene_variant | 0.41 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619543 | c.-348C>G | upstream_gene_variant | 0.45 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619552 | c.-339A>G | upstream_gene_variant | 0.48 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619555 | c.-336C>G | upstream_gene_variant | 0.48 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619564 | c.-327C>G | upstream_gene_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619570 | c.-321G>C | upstream_gene_variant | 0.5 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619579 | c.-312G>C | upstream_gene_variant | 0.52 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619597 | c.-294G>C | upstream_gene_variant | 0.48 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619609 | c.-282G>C | upstream_gene_variant | 0.43 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619630 | c.-261C>T | upstream_gene_variant | 0.42 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619634 | c.-257T>A | upstream_gene_variant | 0.38 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619642 | c.-249G>C | upstream_gene_variant | 0.29 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 619645 | c.-246G>C | upstream_gene_variant | 0.29 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620245 | c.355T>C | synonymous_variant | 0.45 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620249 | p.Ser120Cys | missense_variant | 0.45 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620317 | c.427_429delGTCinsCG | frameshift_variant&missense_variant | 0.48 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620340 | c.450C>G | synonymous_variant | 0.43 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620362 | p.Ala158Thr | missense_variant | 0.4 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
ccsA | 620373 | c.483C>G | synonymous_variant | 0.37 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
Rv0565c | 656197 | p.Leu425Arg | missense_variant | 0.55 | ethionamide | |
Rv0565c | 656212 | p.Arg420His | missense_variant | 0.6 | ethionamide | |
Rv0565c | 656219 | p.His418Tyr | missense_variant | 0.46 | ethionamide | |
Rv0565c | 656220 | c.1251A>T | synonymous_variant | 0.46 | ethionamide | |
Rv0565c | 656223 | c.1248T>C | synonymous_variant | 0.46 | ethionamide | Not assoc w R - Interim |
Rv0565c | 656226 | c.1243_1245delGCCinsTT | frameshift_variant&missense_variant | 0.46 | ethionamide | Uncertain significance |
Rv0565c | 656238 | p.Ala411Glu | missense_variant | 0.4 | ethionamide | |
Rv0565c | 656243 | p.Leu410Met | missense_variant | 0.4 | ethionamide | |
Rv0565c | 656244 | c.1227A>C | synonymous_variant | 0.4 | ethionamide | |
Rv0565c | 656265 | c.1206G>C | synonymous_variant | 0.38 | ethionamide | |
Rv0565c | 656268 | p.Met401Ile | missense_variant | 0.33 | ethionamide | |
Rv0565c | 656277 | c.1194C>G | synonymous_variant | 0.33 | ethionamide | |
Rv0565c | 656283 | c.1188G>C | synonymous_variant | 0.33 | ethionamide | |
Rv0565c | 656289 | c.1182C>G | synonymous_variant | 0.35 | ethionamide | |
Rv0565c | 656292 | c.1179G>A | synonymous_variant | 0.32 | ethionamide | |
Rv0565c | 656298 | c.1173G>C | synonymous_variant | 0.3 | ethionamide | |
Rv0565c | 657300 | c.171C>G | synonymous_variant | 0.37 | ethionamide | |
Rv0565c | 657318 | c.153T>C | synonymous_variant | 0.37 | ethionamide | |
Rv0565c | 657337 | p.Arg45Gln | missense_variant | 0.34 | ethionamide | Uncertain significance |
Rv0565c | 657342 | c.129T>C | synonymous_variant | 0.34 | ethionamide | |
Rv0565c | 657347 | c.124A>C | synonymous_variant | 0.36 | ethionamide | |
Rv0565c | 657348 | c.123A>G | synonymous_variant | 0.37 | ethionamide | |
Rv0565c | 657375 | c.96C>T | synonymous_variant | 0.32 | ethionamide | |
Rv0565c | 657381 | c.90A>G | synonymous_variant | 0.32 | ethionamide | |
Rv0565c | 657385 | p.Ile29Thr | missense_variant | 0.3 | ethionamide | |
Rv0565c | 657701 | c.-231C>G | upstream_gene_variant | 0.41 | ethionamide | |
Rv0565c | 657734 | c.-264T>C | upstream_gene_variant | 0.5 | ethionamide | |
hadA | 731682 | c.-248C>G | upstream_gene_variant | 0.35 | isoniazid | |
hadA | 731690 | c.-240_-237delAGACinsCAGATCTTTTCAAGAA | upstream_gene_variant | 0.44 | isoniazid | |
hadA | 731696 | c.-233_-232delTT | upstream_gene_variant | 0.53 | isoniazid | |
hadA | 731726 | c.-204C>A | upstream_gene_variant | 0.53 | isoniazid | |
hadA | 731732 | c.-198G>A | upstream_gene_variant | 0.66 | isoniazid | |
hadA | 731747 | c.-183T>C | upstream_gene_variant | 0.62 | isoniazid | |
hadA | 731774 | c.-156T>C | upstream_gene_variant | 0.38 | isoniazid | |
hadA | 731789 | c.-141A>G | upstream_gene_variant | 0.38 | isoniazid | |
nusG | 734370 | c.117A>G | synonymous_variant | 0.23 | rifampicin | |
nusG | 734376 | c.123G>A | synonymous_variant | 0.32 | rifampicin | |
nusG | 734403 | c.150C>T | synonymous_variant | 0.58 | rifampicin | |
nusG | 734407 | c.154_156delGTTinsAC | frameshift_variant&missense_variant | 0.56 | rifampicin | |
nusG | 734421 | c.168A>G | synonymous_variant | 0.54 | rifampicin | |
nusG | 734424 | c.171G>C | synonymous_variant | 0.56 | rifampicin | |
nusG | 734442 | c.189G>A | synonymous_variant | 0.71 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.73 | rifampicin | |
nusG | 734457 | c.204C>G | synonymous_variant | 0.43 | rifampicin | |
nusG | 734460 | c.207G>T | synonymous_variant | 0.74 | rifampicin | Not assoc w R - Interim |
nusG | 734475 | c.222T>C | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
nusG | 734481 | c.228C>G | synonymous_variant | 0.49 | rifampicin | |
nusG | 734484 | c.231C>T | synonymous_variant | 0.49 | rifampicin | |
nusG | 734532 | c.279A>G | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
nusG | 734541 | c.288A>G | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
nusG | 734556 | c.303C>T | synonymous_variant | 0.4 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 0.62 | rifampicin | |
nusG | 734580 | c.327T>C | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoB | 760101 | c.295T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 760112 | c.306T>C | synonymous_variant | 0.49 | rifampicin | |
rpoB | 760118 | c.312T>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.53 | rifampicin | Uncertain significance |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.57 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.78 | rifampicin | Not assoc w R - Interim |
rpoB | 760241 | c.435G>C | synonymous_variant | 0.65 | rifampicin | |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.84 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.77 | rifampicin | Not assoc w R - Interim |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.8 | rifampicin | |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.8 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.79 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.85 | rifampicin | Not assoc w R - Interim |
rpoB | 760356 | p.Thr184Ser | missense_variant | 0.8 | rifampicin | Uncertain significance |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.78 | rifampicin | Not assoc w R - Interim |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.76 | rifampicin | |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.75 | rifampicin | Uncertain significance |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.68 | rifampicin | |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.39 | rifampicin | |
rpoB | 760418 | c.612G>C | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.67 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 760487 | c.681G>C | synonymous_variant | 0.51 | rifampicin | |
rpoB | 760519 | p.Thr238Ser | missense_variant | 0.56 | rifampicin | |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.65 | rifampicin | Uncertain significance |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.68 | rifampicin | |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.56 | rifampicin | Uncertain significance |
rpoB | 760571 | c.765G>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.62 | rifampicin | |
rpoB | 760607 | c.801G>A | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>C | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.6 | rifampicin | |
rpoB | 760679 | c.873A>G | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 760721 | c.915C>G | synonymous_variant | 0.58 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.65 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 760751 | c.945G>C | synonymous_variant | 0.6 | rifampicin | |
rpoB | 760755 | c.949_951delCATinsAC | frameshift_variant&missense_variant | 0.58 | rifampicin | |
rpoB | 760760 | c.954C>G | synonymous_variant | 0.53 | rifampicin | |
rpoB | 760769 | c.963C>G | synonymous_variant | 0.58 | rifampicin | |
rpoB | 760784 | c.978G>C | synonymous_variant | 0.57 | rifampicin | |
rpoB | 760793 | c.987A>G | synonymous_variant | 0.57 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.65 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.78 | rifampicin | |
rpoB | 760826 | c.1020C>G | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.77 | rifampicin | Not assoc w R - Interim |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.74 | rifampicin | Not assoc w R - Interim |
rpoB | 760845 | p.Thr347Ala | missense_variant | 0.73 | rifampicin | |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.69 | rifampicin | |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
rpoB | 760869 | p.Val355Thr | missense_variant | 0.67 | rifampicin | |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.7 | rifampicin | |
rpoB | 760919 | c.1113C>G | synonymous_variant | 0.75 | rifampicin | |
rpoB | 760920 | c.1114C>T | synonymous_variant | 0.75 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.71 | rifampicin | |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.75 | rifampicin | Not assoc w R - Interim |
rpoB | 760931 | c.1125C>G | synonymous_variant | 0.59 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoB | 760964 | c.1158C>T | synonymous_variant | 0.59 | rifampicin | |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.56 | rifampicin | |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.79 | rifampicin | Not assoc w R - Interim |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.84 | rifampicin | Not assoc w R - Interim |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.85 | rifampicin | |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.84 | rifampicin | Not assoc w R - Interim |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.85 | rifampicin | Not assoc w R - Interim |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.81 | rifampicin | Not assoc w R - Interim |
rpoB | 761060 | c.1254C>T | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.61 | rifampicin | |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.58 | rifampicin | |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 761183 | c.1377T>C | synonymous_variant | 0.32 | rifampicin | |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 761198 | c.1392G>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.59 | rifampicin | |
rpoB | 761213 | c.1407G>C | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 761306 | c.1500C>G | synonymous_variant | 0.55 | rifampicin | |
rpoB | 761309 | c.1503C>T | synonymous_variant | 0.55 | rifampicin | |
rpoB | 761318 | c.1512G>C | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.69 | rifampicin | Not assoc w R - Interim |
rpoB | 761330 | c.1524G>C | synonymous_variant | 0.52 | rifampicin | |
rpoB | 761354 | c.1548C>T | synonymous_variant | 0.62 | rifampicin | |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 761362 | p.Ser519Thr | missense_variant | 0.48 | rifampicin | |
rpoB | 761373 | p.Val523His | missense_variant | 0.48 | rifampicin | |
rpoB | 761477 | c.1671C>G | synonymous_variant | 0.3 | rifampicin | |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.68 | rifampicin | |
rpoB | 761531 | c.1725C>G | synonymous_variant | 0.72 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.72 | rifampicin | Not assoc w R - Interim |
rpoB | 761561 | c.1755C>G | synonymous_variant | 0.38 | rifampicin | |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.83 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.85 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.87 | rifampicin | Not assoc w R - Interim |
rpoB | 761600 | c.1794T>C | synonymous_variant | 0.48 | rifampicin | |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.86 | rifampicin | |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.84 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>G | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.79 | rifampicin | |
rpoB | 761651 | c.1845C>T | synonymous_variant | 0.79 | rifampicin | |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.79 | rifampicin | Not assoc w R - Interim |
rpoB | 761660 | c.1854G>C | synonymous_variant | 0.46 | rifampicin | |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.37 | rifampicin | |
rpoB | 761675 | c.1869G>T | synonymous_variant | 0.42 | rifampicin | |
rpoB | 761690 | c.1884G>C | synonymous_variant | 0.4 | rifampicin | |
rpoB | 761711 | c.1905C>G | synonymous_variant | 0.42 | rifampicin | |
rpoB | 761717 | c.1911C>G | synonymous_variant | 0.45 | rifampicin | |
rpoB | 761720 | c.1914C>G | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761723 | c.1917_1919delAGAinsC | frameshift_variant&missense_variant | 0.61 | rifampicin | |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.7 | rifampicin | |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.67 | rifampicin | |
rpoB | 761753 | c.1947C>G | synonymous_variant | 0.3 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.66 | rifampicin | |
rpoB | 761772 | p.His656Ala | missense_variant | 0.65 | rifampicin | |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.66 | rifampicin | |
rpoB | 761791 | p.Arg662His | missense_variant | 0.66 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.61 | rifampicin | |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.55 | rifampicin | |
rpoB | 761834 | c.2028T>C | synonymous_variant | 0.6 | rifampicin | |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.52 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.52 | rifampicin | |
rpoB | 761858 | c.2052G>C | synonymous_variant | 0.55 | rifampicin | |
rpoB | 761873 | c.2067A>C | synonymous_variant | 0.55 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.61 | rifampicin | |
rpoB | 761891 | c.2085G>C | synonymous_variant | 0.58 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.56 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.57 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.6 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.58 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 761969 | c.2163G>A | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.56 | rifampicin | |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.34 | rifampicin | |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.49 | rifampicin | |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.57 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.58 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.62 | rifampicin | |
rpoB | 762149 | c.2343G>T | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.57 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.47 | rifampicin | |
rpoB | 762284 | c.2478G>T | synonymous_variant | 0.5 | rifampicin | |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.47 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.5 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.47 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.48 | rifampicin | |
rpoC | 762380 | c.-990T>C | upstream_gene_variant | 0.28 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.39 | rifampicin | |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.49 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.47 | rifampicin | |
rpoB | 762416 | c.2610A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.55 | rifampicin | |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.38 | rifampicin | |
rpoB | 762449 | c.2643C>A | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoB | 762452 | c.2646G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 762470 | c.2664G>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 762509 | c.-861T>G | upstream_gene_variant | 0.39 | rifampicin | |
rpoB | 762510 | c.2704_2706delGCCinsCG | frameshift_variant&missense_variant | 0.38 | rifampicin | |
rpoB | 762857 | c.3051C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 762899 | c.3093G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>T | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762957 | c.3151C>T | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoB | 762962 | c.3156C>T | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.64 | rifampicin | |
rpoB | 762995 | c.3189G>T | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.73 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.73 | rifampicin | Not assoc w R - Interim |
rpoB | 763094 | c.3288G>C | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoB | 763136 | c.3330C>T | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.69 | rifampicin | |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 0.67 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoC | 763202 | c.-168A>C | upstream_gene_variant | 0.56 | rifampicin | |
rpoC | 763205 | c.-165G>C | upstream_gene_variant | 0.55 | rifampicin | |
rpoC | 763208 | c.-162T>C | upstream_gene_variant | 0.55 | rifampicin | |
rpoB | 763214 | c.3408T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 763226 | c.-144A>G | upstream_gene_variant | 0.5 | rifampicin | |
rpoB | 763238 | c.3432T>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 763253 | c.-117G>C | upstream_gene_variant | 0.46 | rifampicin | |
rpoC | 763262 | c.-108C>A | upstream_gene_variant | 0.44 | rifampicin | |
rpoB | 763268 | c.3462C>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 763283 | c.3477T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763284 | c.-86C>T | upstream_gene_variant | 0.34 | rifampicin | |
rpoC | 763402 | c.33C>T | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 763408 | c.39T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.43 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.49 | rifampicin | |
rpoC | 763492 | c.123G>T | synonymous_variant | 0.51 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoC | 763576 | c.207C>G | synonymous_variant | 0.59 | rifampicin | |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.67 | rifampicin | Not assoc w R - Interim |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.68 | rifampicin | |
rpoC | 763639 | c.270G>A | synonymous_variant | 0.66 | rifampicin | |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoC | 763648 | c.279C>T | synonymous_variant | 0.65 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoC | 763663 | c.294C>G | synonymous_variant | 0.65 | rifampicin | |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.69 | rifampicin | Not assoc w R - Interim |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.74 | rifampicin | Not assoc w R - Interim |
rpoC | 763702 | c.333C>T | synonymous_variant | 0.75 | rifampicin | Not assoc w R - Interim |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.7 | rifampicin | |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.75 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.71 | rifampicin | |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.71 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.67 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.67 | rifampicin | |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.7 | rifampicin | |
rpoC | 763780 | c.411C>T | synonymous_variant | 0.58 | rifampicin | |
rpoC | 763786 | c.417C>G | synonymous_variant | 0.57 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 0.63 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.56 | rifampicin | |
rpoC | 763831 | c.462A>G | synonymous_variant | 0.48 | rifampicin | |
rpoC | 763835 | p.Ala156Met | missense_variant | 0.5 | rifampicin | |
rpoC | 763853 | c.484_486delGTCinsAT | frameshift_variant&missense_variant | 0.58 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.55 | rifampicin | |
rpoC | 763871 | p.Gly168Ser | missense_variant | 0.59 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.62 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.65 | rifampicin | |
rpoC | 763888 | c.519G>T | synonymous_variant | 0.72 | rifampicin | |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.73 | rifampicin | |
rpoC | 763939 | c.570G>A | synonymous_variant | 0.62 | rifampicin | |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.72 | rifampicin | |
rpoC | 763948 | c.579G>C | synonymous_variant | 0.6 | rifampicin | |
rpoC | 763960 | c.591T>C | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 763991 | c.622_624delATCinsCG | frameshift_variant&missense_variant | 0.77 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.77 | rifampicin | |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.77 | rifampicin | Not assoc w R - Interim |
rpoC | 764011 | c.642T>C | synonymous_variant | 0.58 | rifampicin | |
rpoC | 764024 | c.655_657delTTGinsCC | frameshift_variant&missense_variant | 0.8 | rifampicin | |
rpoC | 764032 | p.Asp221Glu | missense_variant | 0.79 | rifampicin | |
rpoC | 764040 | p.Ser224Asn | missense_variant | 0.74 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.79 | rifampicin | |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.78 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.81 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.86 | rifampicin | Not assoc w R - Interim |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.86 | rifampicin | Not assoc w R - Interim |
rpoC | 764102 | p.Val245Ile | missense_variant | 0.86 | rifampicin | |
rpoC | 764110 | c.741C>T | synonymous_variant | 0.68 | rifampicin | Not assoc w R - Interim |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.85 | rifampicin | |
rpoC | 764134 | c.765C>G | synonymous_variant | 0.72 | rifampicin | Not assoc w R - Interim |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.72 | rifampicin | Not assoc w R - Interim |
rpoC | 764195 | p.Ser276Thr | missense_variant | 0.72 | rifampicin | |
rpoC | 764203 | c.834G>C | synonymous_variant | 0.78 | rifampicin | |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.8 | rifampicin | Not assoc w R - Interim |
rpoC | 764242 | c.873C>T | synonymous_variant | 0.79 | rifampicin | Not assoc w R - Interim |
rpoC | 764254 | c.885G>A | synonymous_variant | 0.71 | rifampicin | |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.8 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.81 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.8 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.63 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 764489 | c.1120C>T | synonymous_variant | 0.45 | rifampicin | |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.41 | rifampicin | |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.42 | rifampicin | |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.53 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.6 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R |
rpoC | 765259 | c.1890G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 765300 | p.Val644Ala | missense_variant | 0.43 | rifampicin | Uncertain significance |
rpoC | 765304 | c.1935G>A | synonymous_variant | 0.44 | rifampicin | |
rpoC | 765305 | c.1936_1938delATCinsCG | frameshift_variant&missense_variant | 0.43 | rifampicin | |
rpoC | 765319 | c.1950A>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 765326 | p.His653Ala | missense_variant | 0.46 | rifampicin | Uncertain significance |
rpoC | 765330 | p.Ser654Asn | missense_variant | 0.44 | rifampicin | Uncertain significance |
rpoC | 765346 | c.1977C>G | synonymous_variant | 0.53 | rifampicin | |
rpoC | 765349 | c.1980T>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 765352 | c.1983G>C | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 765364 | p.Glu665Asp | missense_variant | 0.5 | rifampicin | |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.5 | rifampicin | Uncertain significance |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.51 | rifampicin | |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.51 | rifampicin | |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.59 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.6 | rifampicin | |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.66 | rifampicin | |
rpoC | 765550 | c.2181C>T | synonymous_variant | 0.61 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.63 | rifampicin | |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.6 | rifampicin | |
rpoC | 765613 | p.His748Gln | missense_variant | 0.54 | rifampicin | |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.55 | rifampicin | |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.48 | rifampicin | Not assoc w R - Interim |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765739 | c.2370G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.38 | rifampicin | Uncertain significance |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.52 | rifampicin | |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.52 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.52 | rifampicin | |
rpoC | 765811 | c.2442T>G | synonymous_variant | 0.59 | rifampicin | |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.62 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.69 | rifampicin | |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.65 | rifampicin | Not assoc w R - Interim |
rpoC | 765934 | c.2565C>T | synonymous_variant | 0.55 | rifampicin | |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.47 | rifampicin | |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.42 | rifampicin | |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.4 | rifampicin | |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.3 | rifampicin | |
rpoC | 766540 | p.Asp1057Glu | missense_variant | 0.4 | rifampicin | |
rpoC | 766543 | c.3174C>T | synonymous_variant | 0.48 | rifampicin | |
rpoC | 766549 | c.3180G>C | synonymous_variant | 0.47 | rifampicin | |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.59 | rifampicin | |
rpoC | 766582 | c.3213C>G | synonymous_variant | 0.51 | rifampicin | |
rpoC | 766583 | c.3214_3216delGGTinsAC | frameshift_variant&missense_variant | 0.57 | rifampicin | |
rpoC | 766591 | c.3222A>G | synonymous_variant | 0.58 | rifampicin | |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.57 | rifampicin | |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.61 | rifampicin | |
rpoC | 766621 | c.3252G>A | synonymous_variant | 0.54 | rifampicin | |
rpoC | 766645 | c.3276A>G | synonymous_variant | 0.56 | rifampicin | |
rpoC | 766654 | c.3285C>G | synonymous_variant | 0.55 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.64 | rifampicin | |
rpoC | 766660 | c.3291G>A | synonymous_variant | 0.55 | rifampicin | |
rpoC | 766666 | c.3297C>T | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.64 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.66 | rifampicin | |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.67 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.65 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.7 | rifampicin | |
rpoC | 766801 | c.3432C>T | synonymous_variant | 0.63 | rifampicin | |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoC | 766837 | c.3468G>C | synonymous_variant | 0.51 | rifampicin | Not assoc w R - Interim |
rpoC | 766843 | c.3474T>G | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoC | 766864 | c.3495G>C | synonymous_variant | 0.71 | rifampicin | |
rpoC | 766879 | c.3510G>A | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 766894 | c.3525T>C | synonymous_variant | 0.69 | rifampicin | |
rpoC | 766895 | c.3526T>C | synonymous_variant | 0.69 | rifampicin | |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.71 | rifampicin | |
rpoC | 766915 | c.3546C>T | synonymous_variant | 0.44 | rifampicin | |
rpoC | 766918 | c.3549C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.74 | rifampicin | |
rpoC | 766934 | p.Glu1189Ser | missense_variant | 0.39 | rifampicin | |
rpoC | 766945 | c.3576A>G | synonymous_variant | 0.81 | rifampicin | Not assoc w R - Interim |
rpoC | 766963 | c.3594T>C | synonymous_variant | 0.81 | rifampicin | Not assoc w R - Interim |
rpoC | 766972 | c.3603G>C | synonymous_variant | 0.79 | rifampicin | |
rpoC | 766978 | c.3609C>A | synonymous_variant | 0.39 | rifampicin | |
rpoC | 766978 | c.3609C>T | synonymous_variant | 0.4 | rifampicin | |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.77 | rifampicin | Not assoc w R - Interim |
rpoC | 767009 | c.3640_3642delTCGinsAGC | synonymous_variant | 0.27 | rifampicin | |
rpoC | 767014 | c.3645G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 0.47 | rifampicin | |
rpoC | 767038 | c.3669G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.69 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.77 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>A | synonymous_variant | 0.57 | rifampicin | |
rpoC | 767149 | c.3780C>A | synonymous_variant | 0.54 | rifampicin | |
rpoC | 767152 | c.3783T>C | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoC | 767167 | c.3798C>G | synonymous_variant | 0.49 | rifampicin | Not assoc w R - Interim |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.56 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.75 | rifampicin | Not assoc w R - Interim |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.76 | rifampicin | |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.78 | rifampicin | Not assoc w R - Interim |
rpoC | 767230 | c.3861G>C | synonymous_variant | 0.78 | rifampicin | Not assoc w R - Interim |
rpoC | 767233 | c.3864T>C | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
mmpR5 | 779075 | p.Ser29Phe | missense_variant | 1.0 | clofazimine | |
bedaquiline | ||||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781571 | c.12C>T | synonymous_variant | 0.44 | streptomycin | |
rpsL | 781595 | c.36T>C | synonymous_variant | 0.46 | streptomycin | |
rpsL | 781605 | p.Ile16Val | missense_variant | 0.49 | streptomycin | Uncertain significance |
rpsL | 781608 | p.Ser17Ala | missense_variant | 0.5 | streptomycin | |
rpsL | 781631 | c.72G>C | synonymous_variant | 0.35 | streptomycin | |
rpsL | 781649 | c.90T>C | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781658 | c.99A>G | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.6 | streptomycin | |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.65 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.61 | streptomycin | |
rpsL | 781733 | c.174G>C | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.34 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.64 | streptomycin | |
rpsL | 781757 | c.198C>T | synonymous_variant | 0.34 | streptomycin | Not assoc w R - Interim |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.64 | streptomycin | |
rpsL | 781769 | c.210G>A | synonymous_variant | 0.39 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.5 | streptomycin | |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.78 | streptomycin | |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781832 | c.273T>G | synonymous_variant | 0.55 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.74 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.78 | streptomycin | |
rpsL | 781877 | c.318T>C | synonymous_variant | 0.59 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.73 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.74 | streptomycin | |
rpsL | 781901 | c.342C>T | synonymous_variant | 0.63 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.73 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.73 | streptomycin | Uncertain significance |
rplC | 800498 | c.-311G>A | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800516 | c.-293G>T | upstream_gene_variant | 0.6 | linezolid | |
rplC | 800537 | c.-272C>T | upstream_gene_variant | 0.58 | linezolid | |
rplC | 800540 | c.-269T>C | upstream_gene_variant | 0.46 | linezolid | |
rplC | 800543 | c.-266C>T | upstream_gene_variant | 0.46 | linezolid | |
rplC | 800546 | c.-263T>G | upstream_gene_variant | 0.57 | linezolid | |
rplC | 800567 | c.-242A>G | upstream_gene_variant | 0.62 | linezolid | |
rplC | 800582 | c.-227C>G | upstream_gene_variant | 0.63 | linezolid | |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.67 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.53 | linezolid | |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 0.5 | linezolid | |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.62 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.55 | linezolid | |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.53 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.47 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.46 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.44 | linezolid | |
rplC | 800738 | c.-71T>C | upstream_gene_variant | 0.41 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.36 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.38 | linezolid | |
Rv1129c | 1253088 | p.Glu483Lys | missense_variant | 1.0 | moxifloxacin | |
levofloxacin | ||||||
rifampicin | Uncertain significance | |||||
isoniazid | Uncertain significance | |||||
Rv1129c | 1254562 | c.-28T>C | upstream_gene_variant | 1.0 | moxifloxacin | Not assoc w R |
levofloxacin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
Rv1129c | 1254582 | c.-48A>G | upstream_gene_variant | 1.0 | moxifloxacin | Uncertain significance |
levofloxacin | Uncertain significance | |||||
rifampicin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
fbiC | 1302899 | c.-32A>G | upstream_gene_variant | 1.0 | clofazimine | Uncertain significance |
pretomanid | ||||||
delamanid | Uncertain significance | |||||
fbiC | 1303674 | c.744C>G | synonymous_variant | 0.47 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303686 | c.756C>G | synonymous_variant | 0.54 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303689 | c.759T>C | synonymous_variant | 0.54 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303695 | c.765T>C | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303704 | c.774T>C | synonymous_variant | 0.54 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303708 | c.778T>C | synonymous_variant | 0.52 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303731 | c.801A>C | synonymous_variant | 0.49 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303732 | p.Ser268Ala | missense_variant | 0.49 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303740 | c.810C>A | synonymous_variant | 0.49 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303746 | c.816T>C | synonymous_variant | 0.5 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303749 | c.819G>C | synonymous_variant | 0.5 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303752 | c.822A>G | synonymous_variant | 0.5 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303755 | c.825T>C | synonymous_variant | 0.51 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303761 | c.831T>C | synonymous_variant | 0.53 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303785 | c.855G>C | synonymous_variant | 0.57 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303797 | c.867A>G | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303818 | c.888C>G | synonymous_variant | 0.58 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303836 | c.906G>C | synonymous_variant | 0.46 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303845 | c.915C>G | synonymous_variant | 0.44 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303854 | c.924T>C | synonymous_variant | 0.48 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303860 | c.930A>G | synonymous_variant | 0.48 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304511 | c.1581C>G | synonymous_variant | 0.35 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304517 | c.1587C>G | synonymous_variant | 0.36 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304526 | c.1596T>G | synonymous_variant | 0.41 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304544 | c.1614T>C | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304545 | p.Val539Thr | missense_variant | 0.45 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304559 | p.Glu543Asp | missense_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304565 | c.1635C>G | synonymous_variant | 0.43 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304568 | c.1638T>C | synonymous_variant | 0.48 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304574 | c.1644C>G | synonymous_variant | 0.5 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1304580 | c.1650T>C | synonymous_variant | 0.53 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305252 | c.2322G>A | synonymous_variant | 0.56 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305276 | c.2346G>C | synonymous_variant | 0.53 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305279 | p.His783Gln | missense_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1305282 | c.2352T>C | synonymous_variant | 0.59 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
sigE | 1364763 | c.351T>C | synonymous_variant | 0.52 | pyrazinamide | |
sigE | 1364767 | c.355A>C | synonymous_variant | 0.46 | pyrazinamide | |
sigE | 1364772 | c.360G>C | synonymous_variant | 0.45 | pyrazinamide | |
sigE | 1364805 | c.393C>G | synonymous_variant | 0.57 | pyrazinamide | |
sigE | 1364811 | c.399A>G | synonymous_variant | 0.59 | pyrazinamide | |
sigE | 1364814 | c.402C>G | synonymous_variant | 0.59 | pyrazinamide | |
sigE | 1364820 | c.408A>G | synonymous_variant | 0.65 | pyrazinamide | |
sigE | 1364839 | c.427T>C | synonymous_variant | 0.61 | pyrazinamide | |
sigE | 1364847 | c.435G>C | synonymous_variant | 0.61 | pyrazinamide | |
sigE | 1364859 | c.447C>G | synonymous_variant | 0.58 | pyrazinamide | |
sigE | 1364865 | c.453G>C | synonymous_variant | 0.61 | pyrazinamide | |
sigE | 1364868 | c.456T>G | synonymous_variant | 0.61 | pyrazinamide | |
sigE | 1364887 | c.475_477delTTAinsCG | frameshift_variant&missense_variant | 0.59 | pyrazinamide | Uncertain significance |
sigE | 1364898 | c.486C>T | synonymous_variant | 0.59 | pyrazinamide | |
sigE | 1364904 | p.Asp164Glu | missense_variant | 0.63 | pyrazinamide | |
sigE | 1364919 | c.507T>C | synonymous_variant | 0.67 | pyrazinamide | |
sigE | 1364922 | c.510G>A | synonymous_variant | 0.67 | pyrazinamide | |
sigE | 1364925 | c.513C>G | synonymous_variant | 0.67 | pyrazinamide | |
sigE | 1364950 | c.538_540delGCAinsTG | frameshift_variant&stop_gained | 0.56 | pyrazinamide | Uncertain significance |
sigE | 1364958 | c.546G>C | synonymous_variant | 0.54 | pyrazinamide | |
sigE | 1364961 | c.549A>G | synonymous_variant | 0.52 | pyrazinamide | |
sigE | 1364964 | c.552T>G | synonymous_variant | 0.5 | pyrazinamide | |
sigE | 1364967 | c.555C>T | synonymous_variant | 0.48 | pyrazinamide | |
sigE | 1364976 | c.564T>C | synonymous_variant | 0.46 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364979 | c.567C>G | synonymous_variant | 0.46 | pyrazinamide | |
sigE | 1364980 | c.568T>C | synonymous_variant | 0.46 | pyrazinamide | |
sigE | 1364984 | p.Ala191Asp | missense_variant | 0.46 | pyrazinamide | |
sigE | 1364994 | c.582G>A | synonymous_variant | 0.5 | pyrazinamide | |
sigE | 1365012 | c.600G>C | synonymous_variant | 0.46 | pyrazinamide | |
sigE | 1365015 | c.603G>C | synonymous_variant | 0.46 | pyrazinamide | |
sigE | 1365024 | c.612T>C | synonymous_variant | 0.48 | pyrazinamide | |
sigE | 1365033 | c.621G>A | synonymous_variant | 0.45 | pyrazinamide | |
sigE | 1365042 | c.630G>C | synonymous_variant | 0.41 | pyrazinamide | |
embR | 1417554 | c.-207C>G | upstream_gene_variant | 1.0 | ethambutol | |
atpE | 1460831 | c.-214T>C | upstream_gene_variant | 0.38 | bedaquiline | |
atpE | 1460840 | c.-205A>G | upstream_gene_variant | 0.38 | bedaquiline | |
atpE | 1460852 | c.-193C>G | upstream_gene_variant | 0.37 | bedaquiline | |
atpE | 1460855 | c.-190T>C | upstream_gene_variant | 0.37 | bedaquiline | |
atpE | 1460858 | c.-187C>G | upstream_gene_variant | 0.39 | bedaquiline | |
atpE | 1460861 | c.-184C>G | upstream_gene_variant | 0.46 | bedaquiline | |
atpE | 1460882 | c.-163T>C | upstream_gene_variant | 0.38 | bedaquiline | |
atpE | 1460897 | c.-148A>C | upstream_gene_variant | 0.33 | bedaquiline | |
atpE | 1460900 | c.-145T>C | upstream_gene_variant | 0.32 | bedaquiline | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.72 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472314 | n.469A>G | non_coding_transcript_exon_variant | 0.36 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472315 | n.470T>C | non_coding_transcript_exon_variant | 0.37 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.76 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.77 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.79 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.79 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.68 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTT | non_coding_transcript_exon_variant | 0.67 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.66 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.63 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473290 | n.1445delCinsTT | non_coding_transcript_exon_variant | 0.67 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrl | 1473668 | n.11C>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473756 | n.99G>A | non_coding_transcript_exon_variant | 0.79 | capreomycin | |
linezolid | ||||||
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.79 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.85 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.82 | capreomycin | |
linezolid | ||||||
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.81 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473945 | n.288T>A | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473946 | n.289A>T | non_coding_transcript_exon_variant | 0.61 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473986 | n.329T>C | non_coding_transcript_exon_variant | 0.26 | capreomycin | |
linezolid | ||||||
rrl | 1473987 | n.330G>A | non_coding_transcript_exon_variant | 0.26 | capreomycin | |
linezolid | ||||||
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 0.29 | capreomycin | |
linezolid | ||||||
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 0.7 | capreomycin | Not assoc w R |
linezolid | Not assoc w R | |||||
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.28 | capreomycin | |
linezolid | ||||||
rrl | 1474012 | n.355C>T | non_coding_transcript_exon_variant | 0.28 | capreomycin | |
linezolid | ||||||
rrl | 1474093 | n.436G>T | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.68 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474291 | n.635_649delTTCCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.61 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.59 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.61 | capreomycin | |
linezolid | ||||||
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 0.68 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.68 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474376 | n.719T>C | non_coding_transcript_exon_variant | 0.71 | capreomycin | |
linezolid | ||||||
rrl | 1474409 | n.756_766delACCCACACGCG | non_coding_transcript_exon_variant | 0.6 | capreomycin | |
linezolid | ||||||
rrl | 1474427 | n.770A>C | non_coding_transcript_exon_variant | 0.64 | capreomycin | |
linezolid | ||||||
rrl | 1474429 | n.772G>C | non_coding_transcript_exon_variant | 0.58 | capreomycin | |
linezolid | ||||||
rrl | 1474431 | n.774_775delGCinsTTTGGG | non_coding_transcript_exon_variant | 0.6 | capreomycin | |
linezolid | ||||||
rrl | 1474435 | n.780_783delGAAT | non_coding_transcript_exon_variant | 0.58 | capreomycin | |
linezolid | ||||||
rrl | 1474627 | n.970G>A | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.67 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474753 | n.1096A>G | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.68 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.69 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.69 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474823 | n.1166C>T | non_coding_transcript_exon_variant | 0.4 | capreomycin | |
linezolid | ||||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475013 | n.1356G>A | non_coding_transcript_exon_variant | 0.52 | capreomycin | |
linezolid | ||||||
rrl | 1475028 | n.1371G>A | non_coding_transcript_exon_variant | 0.64 | capreomycin | |
linezolid | ||||||
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 0.77 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475088 | n.1431A>T | non_coding_transcript_exon_variant | 0.78 | capreomycin | |
linezolid | ||||||
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 0.69 | capreomycin | |
linezolid | ||||||
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.63 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.63 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.69 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.73 | capreomycin | |
linezolid | ||||||
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.75 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475273 | n.1616T>G | non_coding_transcript_exon_variant | 0.53 | capreomycin | |
linezolid | ||||||
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.75 | capreomycin | |
linezolid | ||||||
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.75 | capreomycin | |
linezolid | ||||||
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.56 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.8 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.75 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.74 | capreomycin | |
linezolid | ||||||
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.76 | capreomycin | |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.75 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.74 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475436 | n.1779C>T | non_coding_transcript_exon_variant | 0.61 | capreomycin | |
linezolid | ||||||
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.78 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.8 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.59 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.57 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1475606 | n.1949T>A | non_coding_transcript_exon_variant | 0.32 | capreomycin | |
linezolid | ||||||
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.58 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475638 | n.1981C>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.5 | capreomycin | |
linezolid | ||||||
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.48 | capreomycin | |
linezolid | ||||||
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 0.54 | capreomycin | |
linezolid | ||||||
rrl | 1475761 | n.2104_2106delCGCinsGT | non_coding_transcript_exon_variant | 0.89 | capreomycin | |
linezolid | ||||||
rrl | 1475765 | n.2111delG | non_coding_transcript_exon_variant | 0.88 | capreomycin | |
linezolid | ||||||
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.84 | capreomycin | |
linezolid | ||||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.79 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.64 | capreomycin | |
linezolid | ||||||
rrl | 1476048 | n.2391G>A | non_coding_transcript_exon_variant | 0.64 | capreomycin | |
linezolid | ||||||
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.64 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.62 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 0.62 | capreomycin | |
linezolid | ||||||
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 0.6 | capreomycin | |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.54 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.55 | capreomycin | |
linezolid | ||||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.62 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.61 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.63 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.76 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.76 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 0.55 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.77 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.54 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.73 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.67 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476689 | n.3032A>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1476690 | n.3033C>T | non_coding_transcript_exon_variant | 0.94 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476693 | n.3036G>A | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
rrl | 1476695 | n.3038T>A | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
inhA | 1673535 | c.-667A>C | upstream_gene_variant | 0.45 | ethionamide | |
isoniazid | ||||||
inhA | 1673547 | c.-655T>C | upstream_gene_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1673577 | c.-625C>T | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673580 | c.-622T>C | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1673589 | c.-613A>G | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673592 | c.-610G>A | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673595 | c.-607A>C | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673596 | p.Lys53Glu | missense_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673601 | c.-601G>C | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
inhA | 1673604 | c.-598G>C | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
inhA | 1673607 | c.-595T>C | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673609 | p.Gly57Ala | missense_variant | 0.61 | ethionamide | |
isoniazid | ||||||
inhA | 1673616 | c.-586A>G | upstream_gene_variant | 0.65 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673633 | p.Ser65Asn | missense_variant | 0.7 | ethionamide | |
isoniazid | ||||||
inhA | 1673646 | c.-556T>C | upstream_gene_variant | 0.68 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673657 | p.Thr73Lys | missense_variant | 0.64 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673660 | p.Ala74Glu | missense_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673664 | c.-538A>C | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673667 | c.-535A>G | upstream_gene_variant | 0.7 | ethionamide | |
isoniazid | ||||||
inhA | 1673712 | c.-490A>G | upstream_gene_variant | 0.67 | ethionamide | |
isoniazid | ||||||
inhA | 1673724 | c.-478A>G | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
inhA | 1673730 | c.-472C>G | upstream_gene_variant | 0.66 | ethionamide | |
isoniazid | ||||||
inhA | 1673742 | c.-460C>G | upstream_gene_variant | 0.68 | ethionamide | |
isoniazid | ||||||
inhA | 1673748 | c.-454A>G | upstream_gene_variant | 0.69 | ethionamide | |
isoniazid | ||||||
inhA | 1673784 | c.-418G>C | upstream_gene_variant | 0.67 | ethionamide | |
isoniazid | ||||||
inhA | 1673799 | c.-403T>C | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
inhA | 1673802 | c.-400A>G | upstream_gene_variant | 0.65 | ethionamide | |
isoniazid | ||||||
inhA | 1673826 | c.-376C>A | upstream_gene_variant | 0.66 | ethionamide | |
isoniazid | ||||||
inhA | 1673838 | c.-364T>C | upstream_gene_variant | 0.68 | ethionamide | |
isoniazid | ||||||
inhA | 1673847 | c.-355A>C | upstream_gene_variant | 0.71 | ethionamide | |
isoniazid | ||||||
inhA | 1673853 | c.-349A>C | upstream_gene_variant | 0.73 | ethionamide | |
isoniazid | ||||||
inhA | 1673877 | c.-325C>T | upstream_gene_variant | 0.72 | ethionamide | |
isoniazid | ||||||
inhA | 1673895 | c.-307C>T | upstream_gene_variant | 0.71 | ethionamide | |
isoniazid | ||||||
inhA | 1673901 | c.-301A>G | upstream_gene_variant | 0.7 | ethionamide | |
isoniazid | ||||||
inhA | 1673916 | c.-286A>G | upstream_gene_variant | 0.74 | ethionamide | |
isoniazid | ||||||
inhA | 1673922 | c.-280T>C | upstream_gene_variant | 0.78 | ethionamide | |
isoniazid | ||||||
inhA | 1673946 | c.-256C>G | upstream_gene_variant | 0.77 | ethionamide | |
isoniazid | ||||||
fabG1 | 1673960 | p.Ala174Val | missense_variant | 0.78 | ethionamide | |
isoniazid | ||||||
inhA | 1673988 | c.-214G>C | upstream_gene_variant | 0.76 | ethionamide | |
isoniazid | ||||||
inhA | 1674006 | c.-196T>C | upstream_gene_variant | 0.72 | ethionamide | |
isoniazid | ||||||
inhA | 1674024 | c.-178T>C | upstream_gene_variant | 0.72 | ethionamide | |
isoniazid | ||||||
inhA | 1674033 | c.-169T>C | upstream_gene_variant | 0.73 | ethionamide | |
isoniazid | ||||||
fabG1 | 1674037 | p.Gln200Glu | missense_variant | 0.74 | ethionamide | |
isoniazid | ||||||
inhA | 1674042 | c.-160G>C | upstream_gene_variant | 0.75 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1674045 | c.-157G>A | upstream_gene_variant | 0.75 | ethionamide | |
isoniazid | ||||||
inhA | 1674054 | c.-148T>C | upstream_gene_variant | 0.75 | ethionamide | |
isoniazid | ||||||
inhA | 1674060 | c.-142A>C | upstream_gene_variant | 0.74 | ethionamide | |
isoniazid | ||||||
fabG1 | 1674079 | p.Pro214Ala | missense_variant | 0.7 | ethionamide | |
isoniazid | ||||||
inhA | 1674111 | c.-91G>C | upstream_gene_variant | 0.66 | ethionamide | |
isoniazid | ||||||
inhA | 1674114 | c.-88T>G | upstream_gene_variant | 0.65 | ethionamide | |
isoniazid | ||||||
inhA | 1674129 | c.-73C>T | upstream_gene_variant | 0.62 | ethionamide | |
isoniazid | ||||||
inhA | 1674132 | c.-70T>C | upstream_gene_variant | 0.64 | ethionamide | |
isoniazid | ||||||
inhA | 1674141 | c.-61T>C | upstream_gene_variant | 0.61 | ethionamide | |
isoniazid | ||||||
inhA | 1674171 | c.-31T>C | upstream_gene_variant | 0.5 | ethionamide | |
isoniazid | ||||||
inhA | 1674183 | c.-19_-18insCTTCATCCAC | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1674189 | c.-13C>G | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1674191 | c.-11C>A | upstream_gene_variant | 0.39 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1674192 | c.-10_-9insTT | upstream_gene_variant | 0.41 | ethionamide | |
isoniazid | ||||||
inhA | 1674199 | c.-3C>G | upstream_gene_variant | 0.41 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1674205 | p.Thr2Ala | missense_variant | 0.44 | ethionamide | |
isoniazid | Uncertain significance | |||||
inhA | 1674216 | c.15G>C | synonymous_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1674219 | p.Asp6Glu | missense_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1674231 | c.30T>C | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674235 | c.34_36delGTTinsAC | frameshift_variant&missense_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674238 | c.37_38delAGinsTC | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674243 | c.42A>G | synonymous_variant | 0.47 | ethionamide | |
isoniazid | ||||||
inhA | 1674718 | c.517A>C | synonymous_variant | 0.32 | ethionamide | |
isoniazid | ||||||
inhA | 1674738 | c.537C>G | synonymous_variant | 0.39 | ethionamide | |
isoniazid | ||||||
inhA | 1674756 | c.555T>C | synonymous_variant | 0.37 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
inhA | 1674759 | c.558G>C | synonymous_variant | 0.36 | ethionamide | |
isoniazid | ||||||
inhA | 1674774 | c.573A>G | synonymous_variant | 0.44 | ethionamide | |
isoniazid | ||||||
inhA | 1674795 | c.594G>C | synonymous_variant | 0.55 | ethionamide | |
isoniazid | ||||||
inhA | 1674801 | c.600T>C | synonymous_variant | 0.56 | ethionamide | |
isoniazid | ||||||
inhA | 1674846 | p.Ile215Met | missense_variant | 0.62 | ethionamide | |
isoniazid | ||||||
inhA | 1674870 | c.669T>C | synonymous_variant | 0.58 | ethionamide | |
isoniazid | ||||||
inhA | 1674904 | p.Ala235Pro | missense_variant | 0.54 | ethionamide | |
isoniazid | ||||||
rpsA | 1833554 | p.Thr5Ala | missense_variant | 0.78 | pyrazinamide | Uncertain significance |
rpsA | 1833589 | c.48A>T | synonymous_variant | 0.78 | pyrazinamide | |
rpsA | 1833595 | c.54T>C | synonymous_variant | 0.72 | pyrazinamide | |
rpsA | 1833596 | p.Ser19Ala | missense_variant | 0.59 | pyrazinamide | |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.86 | pyrazinamide | |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.81 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.81 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.6 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.81 | pyrazinamide | |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.66 | pyrazinamide | |
rpsA | 1833790 | c.249T>A | synonymous_variant | 0.64 | pyrazinamide | |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.77 | pyrazinamide | |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.67 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.81 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.81 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.72 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.86 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.88 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.89 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.88 | pyrazinamide | |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.88 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.87 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.76 | pyrazinamide | |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.75 | pyrazinamide | |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.75 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.75 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.74 | pyrazinamide | |
rpsA | 1834093 | c.552G>C | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834108 | c.567C>G | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834123 | c.582C>G | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1834150 | c.609G>C | synonymous_variant | 0.79 | pyrazinamide | |
rpsA | 1834153 | c.612T>C | synonymous_variant | 0.78 | pyrazinamide | |
rpsA | 1834154 | c.613_615delAACinsCG | frameshift_variant&missense_variant | 0.78 | pyrazinamide | Uncertain significance |
rpsA | 1834157 | c.616T>C | synonymous_variant | 0.78 | pyrazinamide | |
rpsA | 1834162 | c.621A>G | synonymous_variant | 0.78 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834165 | c.624A>G | synonymous_variant | 0.79 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.79 | pyrazinamide | Uncertain significance |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.8 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.74 | pyrazinamide | |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.77 | pyrazinamide | |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.73 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.75 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.73 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.74 | pyrazinamide | |
rpsA | 1834282 | c.741C>T | synonymous_variant | 0.6 | pyrazinamide | |
rpsA | 1834297 | c.756C>T | synonymous_variant | 0.65 | pyrazinamide | |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.7 | pyrazinamide | |
rpsA | 1834336 | c.795C>G | synonymous_variant | 0.59 | pyrazinamide | |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.73 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834375 | c.834G>C | synonymous_variant | 0.6 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.73 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.72 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.73 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.71 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.77 | pyrazinamide | |
rpsA | 1834462 | c.921C>T | synonymous_variant | 0.62 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.82 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.83 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.56 | pyrazinamide | |
rpsA | 1834528 | c.987T>G | synonymous_variant | 0.63 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.66 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.67 | pyrazinamide | |
rpsA | 1834606 | c.1065C>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.61 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.66 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.67 | pyrazinamide | |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.78 | pyrazinamide | |
rpsA | 1834723 | c.1182G>A | synonymous_variant | 0.71 | pyrazinamide | |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.77 | pyrazinamide | |
rpsA | 1834765 | p.Glu408Asp | missense_variant | 0.72 | pyrazinamide | |
rpsA | 1834780 | c.1239A>G | synonymous_variant | 0.59 | pyrazinamide | |
rpsA | 1834786 | c.1245A>G | synonymous_variant | 0.53 | pyrazinamide | |
rpsA | 1834789 | c.1248T>C | synonymous_variant | 0.52 | pyrazinamide | |
rpsA | 1834792 | c.1251G>C | synonymous_variant | 0.52 | pyrazinamide | |
rpsA | 1834859 | p.Ala440Thr | missense_variant | 0.85 | pyrazinamide | Uncertain significance |
bacA | 2062922 | p.Ile603Val | missense_variant | 1.0 | streptomycin | Not assoc w R |
kanamycin | Not assoc w R | |||||
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
ndh | 2102317 | c.726A>G | synonymous_variant | 0.44 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102328 | p.Leu239Met | missense_variant | 0.44 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102334 | p.Gln237Glu | missense_variant | 0.44 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102337 | c.706T>C | synonymous_variant | 0.47 | ethionamide | Not assoc w R - Interim |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102344 | c.699T>G | synonymous_variant | 0.43 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102347 | c.696G>C | synonymous_variant | 0.47 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2102350 | c.693G>C | synonymous_variant | 0.41 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
ndh | 2103173 | c.-132delG | upstream_gene_variant | 1.0 | ethionamide | |
delamanid | ||||||
isoniazid | ||||||
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 | isoniazid | Not assoc w R |
katG | 2155503 | c.609C>T | synonymous_variant | 1.0 | isoniazid | Not assoc w R |
katG | 2155632 | c.480A>C | synonymous_variant | 0.46 | isoniazid | |
katG | 2155637 | p.Leu159Ile | missense_variant | 0.42 | isoniazid | |
katG | 2155641 | p.Lys157Asn | missense_variant | 0.43 | isoniazid | Uncertain significance |
katG | 2155661 | p.Val151Ile | missense_variant | 0.39 | isoniazid | |
katG | 2155691 | c.421T>C | synonymous_variant | 0.47 | isoniazid | |
katG | 2155696 | p.Ala139Val | missense_variant | 0.44 | isoniazid | |
katG | 2155698 | c.414C>T | synonymous_variant | 0.46 | isoniazid | Not assoc w R - Interim |
katG | 2155716 | c.396T>C | synonymous_variant | 0.54 | isoniazid | |
katG | 2155722 | c.390G>C | synonymous_variant | 0.5 | isoniazid | |
katG | 2155728 | c.384G>C | synonymous_variant | 0.5 | isoniazid | |
katG | 2155740 | p.Gly124Gln | missense_variant | 0.54 | isoniazid | |
katG | 2155743 | c.369G>C | synonymous_variant | 0.54 | isoniazid | |
katG | 2155747 | p.Ala122Gly | missense_variant | 0.54 | isoniazid | |
katG | 2155767 | c.345C>T | synonymous_variant | 0.39 | isoniazid | |
katG | 2155770 | c.342C>T | synonymous_variant | 0.34 | isoniazid | |
katG | 2155782 | c.330C>G | synonymous_variant | 0.3 | isoniazid | |
katG | 2155785 | c.327T>C | synonymous_variant | 0.33 | isoniazid | |
katG | 2155794 | p.Ala106Ser | missense_variant | 0.32 | isoniazid | |
katG | 2156025 | c.87C>A | synonymous_variant | 0.9 | isoniazid | Not assoc w R |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 | pyrazinamide | Not assoc w R |
PPE35 | 2168011 | p.Ser868Arg | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
PPE35 | 2168319 | p.Thr765Ile | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
Rv1979c | 2222308 | p.Asp286Gly | missense_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | clofazimine | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
kasA | 2517917 | c.-198G>C | upstream_gene_variant | 0.57 | isoniazid | |
kasA | 2517941 | c.-174C>G | upstream_gene_variant | 0.53 | isoniazid | |
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 0.51 | isoniazid | |
kasA | 2517968 | c.-147T>C | upstream_gene_variant | 0.52 | isoniazid | |
kasA | 2517974 | c.-141T>C | upstream_gene_variant | 0.5 | isoniazid | |
kasA | 2518019 | c.-96A>G | upstream_gene_variant | 0.25 | isoniazid | |
kasA | 2518132 | c.18C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518657 | c.543G>C | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518666 | c.552G>A | synonymous_variant | 0.31 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.54 | isoniazid | |
kasA | 2518688 | p.Val192Phe | missense_variant | 0.61 | isoniazid | |
kasA | 2518696 | c.582C>G | synonymous_variant | 0.52 | isoniazid | |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.52 | isoniazid | |
kasA | 2518705 | c.591T>C | synonymous_variant | 0.55 | isoniazid | |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.59 | isoniazid | |
kasA | 2518714 | c.600A>C | synonymous_variant | 0.61 | isoniazid | |
kasA | 2518732 | c.618C>G | synonymous_variant | 0.56 | isoniazid | |
kasA | 2518744 | c.630C>T | synonymous_variant | 0.61 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.77 | isoniazid | |
kasA | 2518777 | c.663C>T | synonymous_variant | 0.69 | isoniazid | |
kasA | 2518783 | c.669T>C | synonymous_variant | 0.67 | isoniazid | |
kasA | 2518792 | c.678C>A | synonymous_variant | 0.67 | isoniazid | |
kasA | 2518795 | c.681C>G | synonymous_variant | 0.69 | isoniazid | |
kasA | 2518796 | c.682C>A | synonymous_variant | 0.51 | isoniazid | |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.71 | isoniazid | |
kasA | 2518843 | c.729T>C | synonymous_variant | 0.47 | isoniazid | |
kasA | 2518853 | p.Leu247Ile | missense_variant | 0.62 | isoniazid | |
kasA | 2518864 | c.750G>C | synonymous_variant | 0.58 | isoniazid | |
kasA | 2518867 | c.753G>A | synonymous_variant | 0.57 | isoniazid | |
kasA | 2518879 | c.765A>G | synonymous_variant | 0.55 | isoniazid | |
kasA | 2518885 | c.771T>C | synonymous_variant | 0.36 | isoniazid | |
kasA | 2518891 | c.777C>G | synonymous_variant | 0.33 | isoniazid | |
kasA | 2518892 | p.Lys260Gln | missense_variant | 0.33 | isoniazid | |
kasA | 2518898 | c.784T>C | synonymous_variant | 0.32 | isoniazid | |
kasA | 2518907 | c.793T>C | synonymous_variant | 0.38 | isoniazid | |
kasA | 2519095 | c.981C>G | synonymous_variant | 0.41 | isoniazid | |
kasA | 2519107 | c.993T>C | synonymous_variant | 0.4 | isoniazid | |
kasA | 2519108 | c.994_996delGATinsCG | frameshift_variant&missense_variant | 0.4 | isoniazid | |
kasA | 2519116 | c.1002C>G | synonymous_variant | 0.43 | isoniazid | |
kasA | 2519128 | c.1014G>A | synonymous_variant | 0.5 | isoniazid | |
kasA | 2519137 | c.1023T>G | synonymous_variant | 0.5 | isoniazid | |
kasA | 2519146 | c.1032C>A | synonymous_variant | 0.52 | isoniazid | |
kasA | 2519158 | c.1044C>T | synonymous_variant | 0.45 | isoniazid | |
kasA | 2519167 | c.1053T>G | synonymous_variant | 0.48 | isoniazid | |
kasA | 2519173 | c.1059C>G | synonymous_variant | 0.5 | isoniazid | |
kasA | 2519196 | p.Thr361Ser | missense_variant | 0.48 | isoniazid | |
kasA | 2519206 | c.1092C>T | synonymous_variant | 0.49 | isoniazid | |
kasA | 2519221 | c.1107G>C | synonymous_variant | 0.45 | isoniazid | |
kasA | 2519230 | c.1116C>T | synonymous_variant | 0.45 | isoniazid | |
kasA | 2519236 | c.1122G>A | synonymous_variant | 0.39 | isoniazid | |
kasA | 2519239 | c.1125A>C | synonymous_variant | 0.39 | isoniazid | |
folC | 2747293 | c.306G>A | synonymous_variant | 0.44 | para-aminosalicylic_acid | |
folC | 2747302 | c.297A>G | synonymous_variant | 0.47 | para-aminosalicylic_acid | |
folC | 2747314 | c.285A>C | synonymous_variant | 0.48 | para-aminosalicylic_acid | |
folC | 2747317 | c.282C>G | synonymous_variant | 0.52 | para-aminosalicylic_acid | |
folC | 2747326 | c.273G>A | synonymous_variant | 0.45 | para-aminosalicylic_acid | |
folC | 2747334 | c.265C>T | synonymous_variant | 0.47 | para-aminosalicylic_acid | |
folC | 2747343 | p.Val86Ile | missense_variant | 0.63 | para-aminosalicylic_acid | |
folC | 2747355 | p.Val82Ile | missense_variant | 0.68 | para-aminosalicylic_acid | |
folC | 2747359 | c.240C>G | synonymous_variant | 0.65 | para-aminosalicylic_acid | |
folC | 2747362 | c.237G>A | synonymous_variant | 0.53 | para-aminosalicylic_acid | |
folC | 2747407 | c.192T>C | synonymous_variant | 0.59 | para-aminosalicylic_acid | |
folC | 2747442 | c.157T>C | synonymous_variant | 0.58 | para-aminosalicylic_acid | |
Rv2477c | 2782441 | c.1602G>A | synonymous_variant | 0.62 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782453 | c.1590C>T | synonymous_variant | 0.7 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782483 | c.1560G>C | synonymous_variant | 0.74 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782501 | c.1542T>C | synonymous_variant | 0.77 | ethambutol | |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782510 | c.1531_1533delGCGinsTC | frameshift_variant&missense_variant | 0.76 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2782528 | c.1515G>C | synonymous_variant | 0.7 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782537 | c.1506T>C | synonymous_variant | 0.68 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782540 | c.1503T>C | synonymous_variant | 0.68 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782549 | c.1494T>C | synonymous_variant | 0.68 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2782567 | c.1476C>G | synonymous_variant | 0.61 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782576 | c.1467C>G | synonymous_variant | 0.6 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782582 | c.1461C>T | synonymous_variant | 0.59 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782587 | p.Leu486Val | missense_variant | 0.53 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782594 | c.1449T>C | synonymous_variant | 0.52 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782606 | c.1435_1437delGGTinsAC | frameshift_variant&missense_variant | 0.44 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2782927 | c.1116A>G | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782969 | c.1074A>C | synonymous_variant | 0.36 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782981 | c.1062G>C | synonymous_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2782984 | c.1059T>C | synonymous_variant | 0.46 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783002 | c.1041T>C | synonymous_variant | 0.54 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783015 | p.Ser343Thr | missense_variant | 0.56 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783020 | c.1023G>C | synonymous_variant | 0.59 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783040 | p.Ala335Thr | missense_variant | 0.72 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2783051 | p.Tyr331Phe | missense_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783059 | c.984T>C | synonymous_variant | 0.79 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783065 | c.978C>T | synonymous_variant | 0.76 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783077 | c.966T>C | synonymous_variant | 0.74 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783083 | c.960G>C | synonymous_variant | 0.34 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783086 | p.Asn319Ser | missense_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783092 | c.951A>G | synonymous_variant | 0.69 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783095 | c.948C>G | synonymous_variant | 0.71 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783101 | c.942G>C | synonymous_variant | 0.71 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783116 | c.927T>C | synonymous_variant | 0.63 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783221 | c.822G>C | synonymous_variant | 0.27 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783224 | c.819C>G | synonymous_variant | 0.27 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783230 | c.813T>G | synonymous_variant | 0.38 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783235 | c.808T>C | synonymous_variant | 0.38 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783244 | p.Thr267Ala | missense_variant | 0.41 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783254 | c.789A>G | synonymous_variant | 0.42 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783263 | c.780G>C | synonymous_variant | 0.48 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783275 | c.768C>A | synonymous_variant | 0.19 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783278 | c.765A>G | synonymous_variant | 0.53 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783290 | c.753G>A | synonymous_variant | 0.2 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783299 | c.744A>G | synonymous_variant | 0.52 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783302 | c.741A>G | synonymous_variant | 0.52 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783329 | c.714G>A | synonymous_variant | 0.22 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783332 | c.711T>C | synonymous_variant | 0.65 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783338 | c.705C>T | synonymous_variant | 0.25 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783353 | c.690T>C | synonymous_variant | 0.54 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783494 | c.549C>G | synonymous_variant | 0.33 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783497 | c.544_546delTTGinsCC | frameshift_variant&missense_variant | 0.35 | ethambutol | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
levofloxacin | Uncertain significance | |||||
kanamycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2783502 | c.541T>C | synonymous_variant | 0.44 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783512 | c.531A>G | synonymous_variant | 0.55 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783520 | c.523T>C | synonymous_variant | 0.52 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783523 | c.520C>T | synonymous_variant | 0.42 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783527 | c.516A>G | synonymous_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783542 | c.501G>C | synonymous_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783548 | c.495T>C | synonymous_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783551 | c.492G>A | synonymous_variant | 0.52 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783557 | c.486T>C | synonymous_variant | 0.44 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783563 | c.480A>G | synonymous_variant | 0.53 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783569 | c.474C>G | synonymous_variant | 0.42 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783572 | c.471A>G | synonymous_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783575 | c.468G>C | synonymous_variant | 0.44 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783586 | p.Ala153Pro | missense_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783593 | c.450T>C | synonymous_variant | 0.5 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783605 | c.438T>C | synonymous_variant | 0.51 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783628 | p.Ala139Ser | missense_variant | 0.4 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783656 | c.387G>C | synonymous_variant | 0.38 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783665 | c.378A>G | synonymous_variant | 0.36 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783674 | c.369T>C | synonymous_variant | 0.31 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783683 | c.360A>G | synonymous_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783695 | c.348C>T | synonymous_variant | 0.32 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783751 | p.Ile98Val | missense_variant | 0.49 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783758 | p.Asp95Glu | missense_variant | 0.55 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783761 | c.282G>C | synonymous_variant | 0.55 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783766 | p.Met93Leu | missense_variant | 0.55 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783767 | c.276C>T | synonymous_variant | 0.53 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783776 | c.267G>C | synonymous_variant | 0.57 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783779 | c.264T>C | synonymous_variant | 0.56 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783794 | c.249G>A | synonymous_variant | 0.6 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783797 | p.Asp82Glu | missense_variant | 0.62 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783806 | c.237G>T | synonymous_variant | 0.64 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783815 | c.228A>G | synonymous_variant | 0.67 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783833 | c.210G>C | synonymous_variant | 0.69 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783837 | p.Thr69Ser | missense_variant | 0.72 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783843 | p.Gly67Asp | missense_variant | 0.72 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783847 | p.Thr66Ala | missense_variant | 0.7 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783851 | c.192G>C | synonymous_variant | 0.7 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783860 | c.183T>C | synonymous_variant | 0.61 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783863 | c.180C>T | synonymous_variant | 0.67 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783883 | c.160T>C | synonymous_variant | 0.68 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783884 | c.159T>C | synonymous_variant | 0.7 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783887 | c.156C>A | synonymous_variant | 0.71 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783914 | c.129T>C | synonymous_variant | 0.79 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783920 | c.123G>T | synonymous_variant | 0.77 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783935 | c.108C>A | synonymous_variant | 0.69 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783953 | c.90G>A | synonymous_variant | 0.67 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783962 | c.81T>C | synonymous_variant | 0.66 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | ||||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783971 | c.72G>C | synonymous_variant | 0.63 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783980 | c.63C>G | synonymous_variant | 0.63 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783992 | c.51T>C | synonymous_variant | 0.57 | ethambutol | Not assoc w R - Interim |
moxifloxacin | ||||||
streptomycin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
kanamycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2681 | 2997325 | p.Ala196Val | missense_variant | 1.0 | capreomycin | Uncertain significance |
Rv2752c | 3065142 | c.1050A>C | synonymous_variant | 0.27 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
levofloxacin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
Rv2752c | 3065146 | p.Phe349Tyr | missense_variant | 0.27 | ethambutol | |
moxifloxacin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
thyX | 3067652 | c.294T>C | synonymous_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067661 | c.285C>G | synonymous_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067679 | p.Cys89Leu | missense_variant | 0.45 | para-aminosalicylic_acid | |
thyX | 3067682 | c.264G>C | synonymous_variant | 0.45 | para-aminosalicylic_acid | |
thyX | 3067685 | c.261A>T | synonymous_variant | 0.47 | para-aminosalicylic_acid | |
thyX | 3067694 | c.252G>C | synonymous_variant | 0.63 | para-aminosalicylic_acid | |
thyX | 3067718 | c.228C>A | synonymous_variant | 0.56 | para-aminosalicylic_acid | |
thyX | 3067721 | c.225T>C | synonymous_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067727 | c.219A>C | synonymous_variant | 0.66 | para-aminosalicylic_acid | |
thyX | 3067739 | c.207T>C | synonymous_variant | 0.68 | para-aminosalicylic_acid | |
thyX | 3067761 | p.Arg62Lys | missense_variant | 0.65 | para-aminosalicylic_acid | |
thyX | 3067765 | p.Leu61Ile | missense_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067781 | c.165C>G | synonymous_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067784 | c.162C>A | synonymous_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067793 | c.153T>C | synonymous_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067799 | c.147G>A | synonymous_variant | 0.69 | para-aminosalicylic_acid | |
thyX | 3067802 | c.144C>G | synonymous_variant | 0.69 | para-aminosalicylic_acid | |
thyX | 3067808 | c.138C>T | synonymous_variant | 0.55 | para-aminosalicylic_acid | |
thyX | 3067811 | c.135G>A | synonymous_variant | 0.68 | para-aminosalicylic_acid | |
thyX | 3067850 | c.96A>T | synonymous_variant | 0.67 | para-aminosalicylic_acid | |
thyX | 3067869 | p.Thr26Ser | missense_variant | 0.63 | para-aminosalicylic_acid | |
thyX | 3067874 | c.72C>G | synonymous_variant | 0.62 | para-aminosalicylic_acid | |
thyX | 3067883 | c.63C>G | synonymous_variant | 0.58 | para-aminosalicylic_acid | |
thyX | 3067886 | c.60A>C | synonymous_variant | 0.43 | para-aminosalicylic_acid | |
thyX | 3067889 | c.57C>G | synonymous_variant | 0.57 | para-aminosalicylic_acid | |
thyX | 3067898 | p.Asp16Glu | missense_variant | 0.43 | para-aminosalicylic_acid | |
ald | 3086728 | c.-92C>T | upstream_gene_variant | 1.0 | cycloserine | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
ald | 3087084 | c.266delA | frameshift_variant | 1.0 | cycloserine | |
Rv3083 | 3448783 | p.Val94Ile | missense_variant | 1.0 | ethionamide | Uncertain significance |
Rv3083 | 3449381 | p.Trp293* | stop_gained | 1.0 | ethionamide | Uncertain significance |
lpqB | 3624350 | c.561G>T | synonymous_variant | 0.75 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R | |||||
lpqB | 3624359 | c.552C>T | synonymous_variant | 0.39 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624377 | c.534C>G | synonymous_variant | 0.54 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3624383 | c.528C>T | synonymous_variant | 0.54 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624392 | c.519C>T | synonymous_variant | 0.48 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3624404 | c.507G>C | synonymous_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624407 | c.504C>G | synonymous_variant | 0.45 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624416 | c.495G>A | synonymous_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624422 | c.489G>C | synonymous_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624425 | p.Glu162Ala | missense_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624428 | c.483A>G | synonymous_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624431 | c.480C>T | synonymous_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624452 | c.459T>C | synonymous_variant | 0.57 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624464 | c.445_447delCTAinsTG | frameshift_variant&synonymous_variant | 0.52 | bedaquiline | |
rifampicin | Uncertain significance | |||||
lpqB | 3624470 | c.441T>C | synonymous_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624476 | c.435C>T | synonymous_variant | 0.43 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3624482 | c.429T>C | synonymous_variant | 0.45 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3624485 | p.Asp142Gly | missense_variant | 0.4 | bedaquiline | Uncertain significance |
rifampicin | Not assoc w R | |||||
lpqB | 3624491 | c.420G>C | synonymous_variant | 0.36 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624593 | c.318G>A | synonymous_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R | |||||
lpqB | 3624710 | c.201G>A | synonymous_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R | |||||
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | bedaquiline | Uncertain significance |
rifampicin | Not assoc w R | |||||
lpqB | 3625117 | c.-207T>C | upstream_gene_variant | 0.42 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625123 | c.-213T>C | upstream_gene_variant | 0.42 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625134 | c.-224T>C | upstream_gene_variant | 0.42 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625135 | c.1479A>G | synonymous_variant | 0.42 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625138 | c.-228C>G | upstream_gene_variant | 0.44 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625141 | c.-231T>C | upstream_gene_variant | 0.42 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625149 | p.Val489Ile | missense_variant | 0.43 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625161 | c.-251T>C | upstream_gene_variant | 0.36 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625162 | c.1452T>C | synonymous_variant | 0.36 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625165 | c.-255G>C | upstream_gene_variant | 0.4 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625186 | c.-276T>C | upstream_gene_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625222 | c.1392T>C | synonymous_variant | 0.37 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625230 | c.-320C>T | upstream_gene_variant | 0.39 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625240 | c.-330T>C | upstream_gene_variant | 0.45 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625243 | c.-333T>C | upstream_gene_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625252 | c.-342G>A | upstream_gene_variant | 0.45 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625255 | c.-345T>C | upstream_gene_variant | 0.41 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625267 | c.1347T>C | synonymous_variant | 0.37 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625270 | c.-360G>C | upstream_gene_variant | 0.38 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625291 | c.-381A>G | upstream_gene_variant | 0.33 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625308 | c.-398C>A | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625313 | p.Arg434Lys | missense_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625569 | c.1045T>C | synonymous_variant | 0.36 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625572 | p.Thr348Ser | missense_variant | 0.34 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625579 | c.-669A>G | upstream_gene_variant | 0.41 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625592 | p.Ser341Asn | missense_variant | 0.47 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625594 | c.-684T>C | upstream_gene_variant | 0.49 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625602 | c.-692T>C | upstream_gene_variant | 0.54 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625612 | c.-702G>C | upstream_gene_variant | 0.58 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625616 | p.Arg333Ala | missense_variant | 0.59 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625624 | c.-714C>G | upstream_gene_variant | 0.61 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625627 | c.-717C>T | upstream_gene_variant | 0.54 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625636 | c.978C>G | synonymous_variant | 0.53 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625648 | c.-738T>C | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625656 | c.958T>C | synonymous_variant | 0.6 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 0.6 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 0.67 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625696 | c.-786A>G | upstream_gene_variant | 0.6 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625705 | c.909C>G | synonymous_variant | 0.67 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625711 | c.903C>T | synonymous_variant | 0.63 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625714 | c.-804C>T | upstream_gene_variant | 0.61 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625720 | c.894G>C | synonymous_variant | 0.58 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 0.61 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625735 | c.-825C>T | upstream_gene_variant | 0.58 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625747 | c.867G>C | synonymous_variant | 0.58 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626704 | c.-91C>T | upstream_gene_variant | 0.44 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626711 | c.-98T>C | upstream_gene_variant | 0.52 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626723 | c.627C>T | synonymous_variant | 0.5 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626726 | c.-113T>C | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626729 | c.-116G>A | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626732 | c.-119A>G | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626735 | c.-122C>T | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626774 | c.574_576delAGGinsCC | frameshift_variant&missense_variant | 0.56 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626783 | c.-170C>G | upstream_gene_variant | 0.56 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 0.56 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3626792 | c.558G>T | synonymous_variant | 0.56 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626795 | c.-182C>T | upstream_gene_variant | 0.54 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626798 | c.-185T>C | upstream_gene_variant | 0.61 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626804 | c.546A>G | synonymous_variant | 0.58 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626840 | c.-227C>G | upstream_gene_variant | 0.36 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626846 | c.504G>A | synonymous_variant | 0.35 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626912 | c.-299T>G | upstream_gene_variant | 0.29 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626930 | c.-317A>G | upstream_gene_variant | 0.31 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626939 | c.411A>G | synonymous_variant | 0.33 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626942 | c.-329A>C | upstream_gene_variant | 0.36 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626972 | c.-359A>G | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626987 | c.-374C>G | upstream_gene_variant | 0.53 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627008 | c.-395G>C | upstream_gene_variant | 0.51 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627011 | c.-398T>G | upstream_gene_variant | 0.51 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627023 | c.-410C>G | upstream_gene_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627065 | c.-452G>C | upstream_gene_variant | 0.58 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627068 | c.282T>C | synonymous_variant | 0.58 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3627071 | c.279G>T | synonymous_variant | 0.57 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627074 | c.-461G>C | upstream_gene_variant | 0.59 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627080 | c.270T>C | synonymous_variant | 0.58 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627083 | c.-470G>C | upstream_gene_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627098 | c.252A>C | synonymous_variant | 0.54 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3627104 | c.244_246delCTCinsTG | frameshift_variant&synonymous_variant | 0.53 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627119 | c.231T>G | synonymous_variant | 0.5 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627122 | c.-509T>C | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627125 | c.-512C>T | upstream_gene_variant | 0.46 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 0.47 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627181 | c.-568T>C | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627182 | c.-569T>C | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627188 | c.162A>G | synonymous_variant | 0.48 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627209 | c.-596G>A | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627221 | c.129C>T | synonymous_variant | 0.5 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 0.51 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627233 | c.-620T>C | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627236 | c.-623T>C | upstream_gene_variant | 0.47 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627242 | c.108C>T | synonymous_variant | 0.48 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627254 | c.-641C>T | upstream_gene_variant | 0.5 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627263 | c.-650C>T | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627266 | c.-653A>G | upstream_gene_variant | 0.48 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627272 | c.-659G>T | upstream_gene_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627275 | c.-662G>T | upstream_gene_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627296 | c.-683T>C | upstream_gene_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627299 | c.49_51delTTGinsCA | frameshift_variant&missense_variant | 0.55 | bedaquiline | |
rifampicin | ||||||
fbiB | 3642478 | p.Asp315Ala | missense_variant | 1.0 | clofazimine | Uncertain significance |
pretomanid | ||||||
delamanid | Uncertain significance | |||||
rpoA | 3877482 | c.1026C>G | synonymous_variant | 0.52 | rifampicin | |
rpoA | 3877494 | p.Glu338Asp | missense_variant | 0.61 | rifampicin | Uncertain significance |
rpoA | 3877503 | c.1005G>C | synonymous_variant | 0.66 | rifampicin | |
rpoA | 3877506 | c.1002C>T | synonymous_variant | 0.63 | rifampicin | Not assoc w R - Interim |
rpoA | 3877515 | c.993G>C | synonymous_variant | 0.68 | rifampicin | |
rpoA | 3877553 | p.Glu319Gln | missense_variant | 0.59 | rifampicin | |
rpoA | 3877557 | c.951C>G | synonymous_variant | 0.54 | rifampicin | Not assoc w R - Interim |
rpoA | 3877571 | p.Pro313Ala | missense_variant | 0.47 | rifampicin | |
rpoA | 3877572 | c.936G>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3877575 | c.933C>T | synonymous_variant | 0.48 | rifampicin | |
rpoA | 3877613 | p.Ile299Val | missense_variant | 0.78 | rifampicin | |
rpoA | 3877656 | c.852T>C | synonymous_variant | 0.78 | rifampicin | Not assoc w R - Interim |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.78 | rifampicin | |
rpoA | 3877677 | p.Ala277Cys | missense_variant | 0.46 | rifampicin | |
rpoA | 3877680 | c.828G>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.82 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.88 | rifampicin | Not assoc w R - Interim |
rpoA | 3877710 | c.798C>T | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoA | 3877728 | c.780C>G | synonymous_variant | 0.35 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoA | 3877773 | c.735G>A | synonymous_variant | 0.35 | rifampicin | |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.71 | rifampicin | Not assoc w R - Interim |
rpoA | 3877803 | c.705G>T | synonymous_variant | 0.37 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.53 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3877872 | c.636C>T | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoA | 3877900 | p.Ser203Asn | missense_variant | 0.28 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoA | 3877986 | c.522G>C | synonymous_variant | 0.43 | rifampicin | |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoA | 3878001 | c.507A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoA | 3878007 | c.501C>A | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3878010 | c.498C>G | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878022 | c.486T>C | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878046 | c.462T>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.48 | rifampicin | |
rpoA | 3878061 | c.447G>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3878064 | c.444G>C | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878067 | c.441C>G | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878076 | c.432C>T | synonymous_variant | 0.4 | rifampicin | |
rpoA | 3878100 | c.408C>G | synonymous_variant | 0.51 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.49 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.58 | rifampicin | |
rpoA | 3878127 | c.381G>C | synonymous_variant | 0.47 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.5 | rifampicin | |
rpoA | 3878141 | p.Met123Leu | missense_variant | 0.57 | rifampicin | Uncertain significance |
rpoA | 3878142 | p.Gly122Glu | missense_variant | 0.53 | rifampicin | |
rpoA | 3878157 | c.351C>G | synonymous_variant | 0.56 | rifampicin | |
rpoA | 3878160 | c.348C>G | synonymous_variant | 0.58 | rifampicin | Not assoc w R - Interim |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.69 | rifampicin | Not assoc w R - Interim |
rpoA | 3878172 | c.336G>C | synonymous_variant | 0.61 | rifampicin | |
rpoA | 3878184 | c.324C>T | synonymous_variant | 0.69 | rifampicin | Not assoc w R - Interim |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.73 | rifampicin | Not assoc w R - Interim |
rpoA | 3878197 | p.Glu104Ala | missense_variant | 0.65 | rifampicin | Uncertain significance |
rpoA | 3878205 | c.303T>C | synonymous_variant | 0.7 | rifampicin | Not assoc w R - Interim |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.76 | rifampicin | Not assoc w R - Interim |
rpoA | 3878247 | c.261G>C | synonymous_variant | 0.76 | rifampicin | |
rpoA | 3878253 | c.255G>C | synonymous_variant | 0.63 | rifampicin | |
rpoA | 3878262 | c.244_246delAGCinsGT | frameshift_variant&synonymous_variant | 0.59 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.62 | rifampicin | Not assoc w R - Interim |
rpoA | 3878276 | c.232C>T | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoA | 3878284 | p.Glu75Ala | missense_variant | 0.64 | rifampicin | |
rpoA | 3878292 | c.216T>C | synonymous_variant | 0.65 | rifampicin | Not assoc w R - Interim |
rpoA | 3878298 | c.210A>G | synonymous_variant | 0.64 | rifampicin | Not assoc w R - Interim |
rpoA | 3878304 | c.204G>T | synonymous_variant | 0.64 | rifampicin | |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.66 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.61 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoA | 3878334 | c.174T>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.57 | rifampicin | |
rpoA | 3878361 | c.147G>C | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878364 | c.144A>C | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878367 | c.141C>G | synonymous_variant | 0.46 | rifampicin | |
rpoA | 3878376 | c.132G>C | synonymous_variant | 0.43 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 0.35 | rifampicin | |
rpoA | 3878388 | c.118_120delCGCinsAG | frameshift_variant&missense_variant | 0.37 | rifampicin | |
rpoA | 3878391 | c.117T>C | synonymous_variant | 0.37 | rifampicin | |
rpoA | 3878396 | c.112C>T | synonymous_variant | 0.37 | rifampicin | |
rpoA | 3879073 | c.-566A>G | upstream_gene_variant | 0.54 | rifampicin | |
rpoA | 3879079 | c.-572A>G | upstream_gene_variant | 0.57 | rifampicin | |
rpoA | 3879088 | c.-581A>C | upstream_gene_variant | 0.57 | rifampicin | |
rpoA | 3879094 | c.-587T>C | upstream_gene_variant | 0.57 | rifampicin | |
rpoA | 3879121 | c.-614T>G | upstream_gene_variant | 0.56 | rifampicin | |
rpoA | 3879127 | c.-620T>C | upstream_gene_variant | 0.59 | rifampicin | |
rpoA | 3879154 | c.-647T>C | upstream_gene_variant | 0.59 | rifampicin | |
rpoA | 3879160 | c.-653A>G | upstream_gene_variant | 0.57 | rifampicin | |
rpoA | 3879222 | c.-715T>C | upstream_gene_variant | 0.35 | rifampicin | |
rpoA | 3879226 | c.-719G>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoA | 3879229 | c.-722A>G | upstream_gene_variant | 0.33 | rifampicin | |
rpoA | 3879232 | c.-725A>G | upstream_gene_variant | 0.33 | rifampicin | |
ddn | 3986648 | c.-196C>G | upstream_gene_variant | 0.59 | delamanid | |
pretomanid | ||||||
clpC1 | 4038302 | c.2403C>G | synonymous_variant | 0.41 | pyrazinamide | |
clpC1 | 4038308 | c.2395_2397delGTGinsAC | frameshift_variant&missense_variant | 0.66 | pyrazinamide | |
clpC1 | 4038329 | p.Glu792Asp | missense_variant | 0.54 | pyrazinamide | |
clpC1 | 4038350 | c.2355C>G | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 0.72 | pyrazinamide | |
clpC1 | 4038374 | c.2331C>T | synonymous_variant | 0.55 | pyrazinamide | |
clpC1 | 4038383 | c.2322G>A | synonymous_variant | 0.53 | pyrazinamide | |
clpC1 | 4038388 | c.2317T>C | synonymous_variant | 0.67 | pyrazinamide | |
clpC1 | 4038392 | c.2313C>T | synonymous_variant | 0.66 | pyrazinamide | |
clpC1 | 4038398 | c.2307G>T | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 0.45 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038407 | c.2298G>C | synonymous_variant | 0.53 | pyrazinamide | |
clpC1 | 4038410 | c.2295C>T | synonymous_variant | 0.55 | pyrazinamide | |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4038433 | c.2272C>T | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4038434 | c.2271G>A | synonymous_variant | 0.52 | pyrazinamide | |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.63 | pyrazinamide | |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.61 | pyrazinamide | |
clpC1 | 4038460 | p.Leu749Met | missense_variant | 0.55 | pyrazinamide | |
clpC1 | 4038474 | p.Ser744Thr | missense_variant | 0.46 | pyrazinamide | |
clpC1 | 4038485 | p.Gly740Lys | missense_variant | 0.27 | pyrazinamide | |
clpC1 | 4038488 | p.Ala739Gly | missense_variant | 0.23 | pyrazinamide | |
clpC1 | 4038494 | c.2211G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038498 | p.Ser736Asp | missense_variant | 0.26 | pyrazinamide | |
clpC1 | 4038519 | p.Arg729Lys | missense_variant | 0.54 | pyrazinamide | |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.61 | pyrazinamide | |
clpC1 | 4038536 | c.2169C>T | synonymous_variant | 0.4 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038541 | c.2164C>T | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038596 | c.2109A>G | synonymous_variant | 0.74 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 0.82 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 0.84 | pyrazinamide | |
clpC1 | 4038644 | p.Glu687Asp | missense_variant | 0.34 | pyrazinamide | |
clpC1 | 4038647 | c.2058T>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038653 | c.2052C>T | synonymous_variant | 0.51 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 0.84 | pyrazinamide | |
clpC1 | 4038661 | p.Ser682Thr | missense_variant | 0.84 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 0.83 | pyrazinamide | |
clpC1 | 4038671 | c.2034T>C | synonymous_variant | 0.85 | pyrazinamide | |
clpC1 | 4038674 | c.2031C>G | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>C | synonymous_variant | 0.87 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038692 | c.2013C>G | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038695 | c.2010C>G | synonymous_variant | 0.87 | pyrazinamide | |
clpC1 | 4038701 | c.2004G>C | synonymous_variant | 0.87 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 0.87 | pyrazinamide | |
clpC1 | 4038707 | c.1998C>G | synonymous_variant | 0.86 | pyrazinamide | |
clpC1 | 4038710 | c.1995G>C | synonymous_variant | 0.86 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 0.84 | pyrazinamide | |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038755 | c.1950G>T | synonymous_variant | 0.82 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.82 | pyrazinamide | |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4038790 | c.1915C>T | synonymous_variant | 0.8 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.77 | pyrazinamide | |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4038848 | c.1857C>T | synonymous_variant | 0.6 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038860 | c.1845G>T | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.78 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.58 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.76 | pyrazinamide | |
clpC1 | 4038923 | c.1780_1782delCTAinsTG | frameshift_variant&synonymous_variant | 0.74 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.74 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.72 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.71 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.72 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.73 | pyrazinamide | |
clpC1 | 4039037 | c.1668T>C | synonymous_variant | 0.58 | pyrazinamide | |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.74 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>T | synonymous_variant | 0.61 | pyrazinamide | |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 0.67 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.68 | pyrazinamide | |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 0.69 | pyrazinamide | |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.69 | pyrazinamide | |
clpC1 | 4039128 | p.Lys526Arg | missense_variant | 0.58 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.67 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.63 | pyrazinamide | |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 0.69 | pyrazinamide | |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4039187 | c.1518G>C | synonymous_variant | 0.69 | pyrazinamide | |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 0.71 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039268 | c.1437C>G | synonymous_variant | 0.74 | pyrazinamide | |
clpC1 | 4039274 | c.1431G>C | synonymous_variant | 0.73 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039286 | c.1419T>C | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4039289 | c.1416T>C | synonymous_variant | 0.72 | pyrazinamide | |
clpC1 | 4039295 | c.1410A>C | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4039304 | c.1401G>A | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4039319 | c.1386T>C | synonymous_variant | 0.61 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039322 | c.1383T>C | synonymous_variant | 0.53 | pyrazinamide | |
clpC1 | 4039328 | c.1377A>C | synonymous_variant | 0.51 | pyrazinamide | |
clpC1 | 4039331 | c.1374C>G | synonymous_variant | 0.46 | pyrazinamide | |
clpC1 | 4039337 | p.Thr456Gln | missense_variant | 0.47 | pyrazinamide | |
clpC1 | 4039349 | c.1356C>T | synonymous_variant | 0.49 | pyrazinamide | |
clpC1 | 4039352 | c.1353C>G | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4039364 | c.1341C>G | synonymous_variant | 0.55 | pyrazinamide | |
clpC1 | 4039391 | c.1314T>G | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039409 | c.1296T>C | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039412 | c.1293T>C | synonymous_variant | 0.55 | pyrazinamide | |
clpC1 | 4039415 | p.Glu430Asp | missense_variant | 0.55 | pyrazinamide | Uncertain significance |
clpC1 | 4039430 | c.1275T>C | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4039439 | c.1266C>T | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 0.58 | pyrazinamide | |
clpC1 | 4039454 | c.1251A>G | synonymous_variant | 0.58 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039463 | c.1242C>G | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 0.62 | pyrazinamide | |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 0.64 | pyrazinamide | |
clpC1 | 4039481 | c.1224T>C | synonymous_variant | 0.61 | pyrazinamide | |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039517 | c.1188C>G | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.62 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.73 | pyrazinamide | |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4039913 | c.792C>T | synonymous_variant | 0.64 | pyrazinamide | |
clpC1 | 4039925 | c.780C>G | synonymous_variant | 0.54 | pyrazinamide | |
clpC1 | 4039928 | c.775_777delAGCinsTCG | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.62 | pyrazinamide | |
clpC1 | 4039946 | c.759A>C | synonymous_variant | 0.54 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.56 | pyrazinamide | |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.59 | pyrazinamide | |
clpC1 | 4039991 | c.714G>T | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4039996 | p.Glu237Gln | missense_variant | 0.63 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.59 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.61 | pyrazinamide | |
clpC1 | 4040090 | c.613_615delTCTinsAGC | synonymous_variant | 0.75 | pyrazinamide | |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.75 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040105 | c.600C>G | synonymous_variant | 0.79 | pyrazinamide | |
clpC1 | 4040126 | c.579C>T | synonymous_variant | 0.71 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040147 | c.558A>G | synonymous_variant | 0.82 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040162 | c.543G>C | synonymous_variant | 0.76 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040165 | c.540G>C | synonymous_variant | 0.7 | pyrazinamide | |
clpC1 | 4040195 | c.510G>C | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4040201 | c.504C>G | synonymous_variant | 0.6 | pyrazinamide | |
clpC1 | 4040207 | c.498T>G | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4040213 | c.490_492delTCTinsAGC | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4040219 | c.486C>G | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4040222 | c.483G>A | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4040225 | c.480A>C | synonymous_variant | 0.48 | pyrazinamide | |
clpC1 | 4040228 | c.477G>T | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4040231 | c.474C>T | synonymous_variant | 0.52 | pyrazinamide | |
clpC1 | 4040237 | c.468C>T | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4040249 | c.456A>G | synonymous_variant | 0.57 | pyrazinamide | |
clpC1 | 4040255 | c.450C>G | synonymous_variant | 0.5 | pyrazinamide | |
clpC1 | 4040291 | c.414G>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4040315 | c.390G>A | synonymous_variant | 0.4 | pyrazinamide | |
clpC1 | 4040330 | c.375C>G | synonymous_variant | 0.82 | pyrazinamide | |
clpC1 | 4040342 | c.363C>G | synonymous_variant | 0.82 | pyrazinamide | |
clpC1 | 4040348 | c.357G>T | synonymous_variant | 0.45 | pyrazinamide | |
clpC1 | 4040354 | c.351A>G | synonymous_variant | 0.81 | pyrazinamide | |
clpC1 | 4040363 | c.342A>C | synonymous_variant | 0.86 | pyrazinamide | |
clpC1 | 4040369 | c.336C>G | synonymous_variant | 0.79 | pyrazinamide | |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 0.71 | pyrazinamide | |
clpC1 | 4040411 | c.294T>G | synonymous_variant | 0.69 | pyrazinamide | |
clpC1 | 4040423 | c.282A>G | synonymous_variant | 0.76 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040426 | c.279T>C | synonymous_variant | 0.78 | pyrazinamide | |
clpC1 | 4040431 | c.274T>C | synonymous_variant | 0.76 | pyrazinamide | |
clpC1 | 4040444 | c.261C>T | synonymous_variant | 0.54 | pyrazinamide | |
clpC1 | 4040450 | c.255A>G | synonymous_variant | 0.72 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040462 | c.243C>G | synonymous_variant | 0.66 | pyrazinamide | |
clpC1 | 4040465 | c.240T>C | synonymous_variant | 0.69 | pyrazinamide | |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 0.52 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040480 | c.225T>G | synonymous_variant | 0.65 | pyrazinamide | |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 0.63 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040528 | c.177G>C | synonymous_variant | 0.51 | pyrazinamide | |
clpC1 | 4040531 | c.174T>C | synonymous_variant | 0.64 | pyrazinamide | |
clpC1 | 4040534 | c.171A>G | synonymous_variant | 0.64 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040537 | c.168G>T | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040546 | c.159G>C | synonymous_variant | 0.63 | pyrazinamide | |
clpC1 | 4040551 | c.154T>C | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040561 | c.144A>G | synonymous_variant | 0.47 | pyrazinamide | |
clpC1 | 4040567 | c.138C>G | synonymous_variant | 0.42 | pyrazinamide | |
glpK | 4138377 | p.Val460Ala | missense_variant | 1.0 | ethambutol | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
streptomycin | Not assoc w R | |||||
levofloxacin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
embC | 4242643 | c.2781C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embC | 4242970 | c.3108C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4245737 | c.-777A>C | upstream_gene_variant | 0.44 | ethambutol | |
embB | 4245740 | c.-774T>C | upstream_gene_variant | 0.44 | ethambutol | |
embA | 4245785 | c.2553G>C | synonymous_variant | 0.47 | ethambutol | Not assoc w R - Interim |
embB | 4245797 | c.-717C>G | upstream_gene_variant | 0.47 | ethambutol | |
embB | 4246864 | c.351C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4247371 | c.858C>G | synonymous_variant | 0.43 | ethambutol | |
embB | 4247375 | p.Leu288Val | missense_variant | 0.41 | ethambutol | |
embB | 4247389 | c.876C>G | synonymous_variant | 0.48 | ethambutol | |
embB | 4247395 | c.882C>G | synonymous_variant | 0.46 | ethambutol | |
embB | 4247437 | c.924A>C | synonymous_variant | 0.52 | ethambutol | |
embB | 4247464 | c.951C>G | synonymous_variant | 0.54 | ethambutol | |
embB | 4247467 | c.954C>T | synonymous_variant | 0.52 | ethambutol | |
embB | 4247470 | c.957T>C | synonymous_variant | 0.54 | ethambutol | |
embB | 4247491 | c.978G>C | synonymous_variant | 0.56 | ethambutol | |
embB | 4247497 | c.984T>C | synonymous_variant | 0.58 | ethambutol | |
embB | 4247512 | c.999T>C | synonymous_variant | 0.57 | ethambutol | |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4247716 | c.1203C>T | synonymous_variant | 0.3 | ethambutol | |
embB | 4247725 | c.1212G>C | synonymous_variant | 0.3 | ethambutol | |
embB | 4247729 | p.Gly406Pro | missense_variant | 0.27 | ethambutol | |
embB | 4247743 | c.1230C>G | synonymous_variant | 0.38 | ethambutol | |
embB | 4247746 | c.1233C>T | synonymous_variant | 0.4 | ethambutol | |
embB | 4247773 | c.1260G>A | synonymous_variant | 0.41 | ethambutol | |
embB | 4247776 | c.1263G>T | synonymous_variant | 0.5 | ethambutol | |
embB | 4247792 | c.1279C>A | synonymous_variant | 0.44 | ethambutol | Not assoc w R - Interim |
embB | 4247797 | c.1284C>G | synonymous_variant | 0.56 | ethambutol | |
embB | 4247800 | c.1287A>G | synonymous_variant | 0.48 | ethambutol | Not assoc w R - Interim |
embB | 4247803 | c.1290G>C | synonymous_variant | 0.55 | ethambutol | |
embB | 4247815 | c.1302C>G | synonymous_variant | 0.56 | ethambutol | |
embB | 4247821 | c.1308T>C | synonymous_variant | 0.56 | ethambutol | |
embB | 4247830 | c.1317A>G | synonymous_variant | 0.5 | ethambutol | Not assoc w R - Interim |
embB | 4247839 | c.1326G>C | synonymous_variant | 0.48 | ethambutol | Not assoc w R - Interim |
embB | 4247881 | c.1368G>C | synonymous_variant | 0.56 | ethambutol | |
embB | 4247887 | c.1374C>T | synonymous_variant | 0.3 | ethambutol | Not assoc w R - Interim |
embB | 4247899 | p.Met462Ile | missense_variant | 0.51 | ethambutol | |
embB | 4247905 | c.1392G>C | synonymous_variant | 0.29 | ethambutol | Not assoc w R - Interim |
embB | 4248007 | c.1494C>G | synonymous_variant | 0.47 | ethambutol | |
embB | 4248025 | c.1512A>G | synonymous_variant | 0.38 | ethambutol | |
embB | 4248035 | p.Val508Ile | missense_variant | 0.42 | ethambutol | |
embB | 4248040 | c.1527C>A | synonymous_variant | 0.38 | ethambutol | |
embB | 4248041 | p.Ala510Thr | missense_variant | 0.38 | ethambutol | Uncertain significance |
embB | 4248044 | p.Lys511Ala | missense_variant | 0.38 | ethambutol | |
embB | 4248055 | c.1542G>C | synonymous_variant | 0.39 | ethambutol | |
embB | 4248070 | c.1557T>C | synonymous_variant | 0.44 | ethambutol | |
embB | 4248085 | c.1572T>C | synonymous_variant | 0.46 | ethambutol | |
embB | 4248097 | c.1584C>G | synonymous_variant | 0.43 | ethambutol | |
embB | 4248130 | c.1617G>C | synonymous_variant | 0.39 | ethambutol | |
embB | 4248133 | c.1620C>G | synonymous_variant | 0.32 | ethambutol | |
embB | 4248142 | c.1629T>C | synonymous_variant | 0.33 | ethambutol | |
embB | 4248143 | c.1630T>C | synonymous_variant | 0.33 | ethambutol | |
embB | 4248149 | p.Thr546Ala | missense_variant | 0.36 | ethambutol | Uncertain significance |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.33 | ethambutol | Not assoc w R - Interim |
embB | 4248161 | c.1648C>T | synonymous_variant | 0.25 | ethambutol | Not assoc w R - Interim |
embB | 4248169 | c.1656C>G | synonymous_variant | 0.34 | ethambutol | |
embB | 4248172 | c.1659G>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4248200 | p.Ile563Val | missense_variant | 0.38 | ethambutol | |
embB | 4248206 | c.1693_1695delAGCinsGA | frameshift_variant&missense_variant | 0.39 | ethambutol | |
embB | 4248220 | c.1707A>C | synonymous_variant | 0.32 | ethambutol | |
embB | 4248304 | c.1791G>C | synonymous_variant | 0.47 | ethambutol | |
embB | 4248316 | c.1803C>G | synonymous_variant | 0.52 | ethambutol | |
embB | 4248319 | c.1806A>G | synonymous_variant | 0.55 | ethambutol | |
embB | 4248322 | c.1809G>T | synonymous_variant | 0.53 | ethambutol | |
embB | 4249447 | c.2934G>C | synonymous_variant | 0.37 | ethambutol | |
embB | 4249465 | c.2952G>A | synonymous_variant | 0.48 | ethambutol | |
embB | 4249469 | p.Leu986Met | missense_variant | 0.52 | ethambutol | |
embB | 4249483 | c.2970C>T | synonymous_variant | 0.47 | ethambutol | |
embB | 4249486 | c.2973T>G | synonymous_variant | 0.47 | ethambutol | |
embB | 4249487 | c.2974T>C | synonymous_variant | 0.47 | ethambutol | |
embB | 4249498 | c.2985G>C | synonymous_variant | 0.47 | ethambutol | |
embB | 4249521 | p.Ala1003Val | missense_variant | 0.42 | ethambutol | |
embB | 4249525 | c.3012T>C | synonymous_variant | 0.42 | ethambutol | Not assoc w R - Interim |
embB | 4249529 | p.Ile1006Val | missense_variant | 0.42 | ethambutol | |
embB | 4249532 | p.Ala1007Thr | missense_variant | 0.42 | ethambutol | Uncertain significance |
embB | 4249537 | c.3024A>G | synonymous_variant | 0.43 | ethambutol | |
embB | 4249546 | c.3033G>A | synonymous_variant | 0.43 | ethambutol | |
embB | 4249548 | p.Phe1012Tyr | missense_variant | 0.43 | ethambutol | |
embB | 4249552 | c.3039C>G | synonymous_variant | 0.44 | ethambutol | |
embB | 4249558 | c.3045A>C | synonymous_variant | 0.46 | ethambutol | |
embB | 4249568 | c.3055_3057delTCGinsAC | frameshift_variant&missense_variant | 0.41 | ethambutol | |
embB | 4249573 | c.3060T>C | synonymous_variant | 0.42 | ethambutol | |
embB | 4249580 | p.Leu1023Met | missense_variant | 0.47 | ethambutol | |
embB | 4249594 | c.3081G>C | synonymous_variant | 0.46 | ethambutol | |
embB | 4249600 | c.3087A>G | synonymous_variant | 0.38 | ethambutol | |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 | capreomycin | Not assoc w R |
amikacin | Not assoc w R | |||||
kanamycin | Not assoc w R | |||||
whiB6 | 4338732 | c.-211C>T | upstream_gene_variant | 1.0 | capreomycin | |
amikacin | ||||||
kanamycin | ||||||
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 | streptomycin | Not assoc w R |