Rv0006 - c.1104C>T


Drug resistance types
11 Sensitive 5 RR-TB 33 HR-TB 11 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 69 Other
lineage Counts
lineage Count
La2;lineage4.9 1
lineage2.2.1 6
lineage2.1;lineage4.9 5
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
lineage4.9 30
lineage4.1.1.1 1
La3;lineage4.9 6
M.canetti;lineage2.1;lineage4.9 2
La3 2
lineage4.9;lineage6.3 5
lineage2.1 2
La3;lineage2.1;lineage4.9 3
lineage3 1
lineage3.1 1
La1.7;M.canetti;lineage4.9 2
La1.2.BCG 1
lineage4.6.3;lineage4.9 1
lineage2.2.2;lineage4 1
lineage4.9;lineage7 3
lineage4.1;lineage4.8 2
8
M.canetti;lineage2.2 2
lineage4.1.2.1 2
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.9;lineage7 3
La1.7;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.2.2 2
lineage4.1.1.3 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
lineage4.8 1
La2;lineage2.2 1
La3;lineage1.1.2 1
lineage6.1.3 1
M.canetti;lineage4.9 2
lineage4 1
La1;lineage4.9 1
La3;lineage4.8 2
La1.7;lineage4.2 1
La1.2 1
lineage4.3.4.2.1 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 133
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1196546 Other lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
ERR176751 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
SRR1184346 HR-TB lineage3.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1184372 MDR-TB None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR6045010 Sensitive lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR26399973 Other La3;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR29096879 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR6789626 Other None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4818347 Other lineage4.1.2 None
ERR6866807 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR5341400 Sensitive lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4769521 RR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR29017461 Other La3;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1184294 Other lineage4.9 None
SRR23961549 Other La1.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1167384 Other La3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR4407463 HR-TB None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1175074 Other None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR18003019 Other lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None