TB-Profiler result

Run: SRR6046382
Summary

Run ID: SRR6046382

Sample name:

Date: 04-04-2023 12:15:57

Number of reads: 1144812

Percentage reads mapped: 37.3

Strain: lineage2.2.1

Drug-resistance: HR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.95
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.97
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.96
La1.7.X-unk4 M.bovis None None 0.06
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
katG 2155693 p.Ser140Asn missense_variant 0.22 isoniazid
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6100 c.861G>C synonymous_variant 0.19
gyrB 6109 c.870G>C synonymous_variant 0.21
gyrB 6115 c.876A>G synonymous_variant 0.25
gyrB 6121 c.882C>T synonymous_variant 0.29
gyrB 6127 c.888G>C synonymous_variant 0.35
gyrB 6145 c.906C>T synonymous_variant 0.43
gyrB 6160 c.921C>G synonymous_variant 0.51
gyrB 6184 c.945C>T synonymous_variant 0.51
gyrB 6190 c.951A>G synonymous_variant 0.51
gyrB 6196 c.957C>T synonymous_variant 0.49
gyrB 6202 c.963C>T synonymous_variant 0.45
gyrB 6203 p.Ser322Ala missense_variant 0.43
gyrB 6211 c.972G>C synonymous_variant 0.45
gyrB 6217 c.978G>C synonymous_variant 0.47
gyrB 6220 c.981G>C synonymous_variant 0.45
gyrB 6223 c.984G>C synonymous_variant 0.45
gyrB 6235 c.996C>G synonymous_variant 0.49
gyrB 6244 c.1005C>A synonymous_variant 0.49
gyrB 6247 c.1008G>A synonymous_variant 0.46
gyrB 6250 c.1011A>G synonymous_variant 0.5
gyrB 6256 c.1017G>A synonymous_variant 0.5
gyrB 6268 c.1029C>G synonymous_variant 0.56
gyrB 6280 c.1041T>C synonymous_variant 0.58
gyrB 6295 c.1056A>G synonymous_variant 0.53
gyrB 6298 c.1059C>G synonymous_variant 0.52
gyrB 6299 c.1060C>T synonymous_variant 0.53
gyrA 6307 c.-995T>G upstream_gene_variant 0.52
gyrA 6310 c.-992G>C upstream_gene_variant 0.51
gyrA 6319 c.-983G>C upstream_gene_variant 0.5
gyrA 6325 c.-977C>T upstream_gene_variant 0.49
gyrB 6326 p.Ser363Ala missense_variant 0.49
gyrA 6358 c.-944C>G upstream_gene_variant 0.49
gyrA 6362 c.-940_-938delTTGinsCTC upstream_gene_variant 0.49
gyrA 6367 c.-935C>G upstream_gene_variant 0.48
gyrA 6376 c.-926G>A upstream_gene_variant 0.5
gyrA 6382 c.-920A>G upstream_gene_variant 0.48
gyrA 6388 c.-914T>C upstream_gene_variant 0.42
gyrA 6400 c.-902C>A upstream_gene_variant 0.32
gyrA 6403 c.-899T>C upstream_gene_variant 0.32
gyrA 6415 c.-887G>C upstream_gene_variant 0.19
gyrA 6469 c.-833T>G upstream_gene_variant 0.15
gyrA 6478 c.-824G>A upstream_gene_variant 0.16
gyrA 6484 c.-818A>G upstream_gene_variant 0.17
gyrA 6499 c.-803A>G upstream_gene_variant 0.18
gyrA 6502 c.-800T>A upstream_gene_variant 0.18
gyrA 6505 c.-797G>A upstream_gene_variant 0.18
gyrA 6508 c.-794A>C upstream_gene_variant 0.19
gyrA 6523 c.-779G>C upstream_gene_variant 0.19
gyrA 6526 c.-776T>C upstream_gene_variant 0.19
gyrB 6531 p.Ser431Thr missense_variant 0.2
gyrA 6535 c.-767C>A upstream_gene_variant 0.19
gyrA 6538 c.-764C>A upstream_gene_variant 0.2
gyrA 6547 c.-755T>A upstream_gene_variant 0.37
gyrA 6551 c.-751T>C upstream_gene_variant 0.39
gyrA 6571 c.-731T>C upstream_gene_variant 0.45
gyrA 6583 c.-719G>C upstream_gene_variant 0.53
gyrA 6592 c.-710C>A upstream_gene_variant 0.52
gyrA 6595 c.-707G>A upstream_gene_variant 0.54
gyrA 6610 c.-692C>G upstream_gene_variant 0.61
gyrA 6613 c.-689A>G upstream_gene_variant 0.53
gyrA 6622 c.-680C>T upstream_gene_variant 0.49
gyrA 6628 c.-674C>T upstream_gene_variant 0.47
gyrA 6634 c.-668T>C upstream_gene_variant 0.5
gyrA 6637 c.-665T>G upstream_gene_variant 0.49
gyrA 6640 c.-662A>C upstream_gene_variant 0.47
gyrA 6643 c.-659A>G upstream_gene_variant 0.47
gyrA 6646 c.-656C>T upstream_gene_variant 0.49
gyrA 6649 c.-653T>C upstream_gene_variant 0.49
gyrA 6655 c.-647T>C upstream_gene_variant 0.5
gyrA 6664 c.-638C>T upstream_gene_variant 0.47
gyrA 6673 c.-629A>C upstream_gene_variant 0.5
gyrA 6676 c.-626T>G upstream_gene_variant 0.5
gyrA 6700 c.-602T>C upstream_gene_variant 0.46
gyrA 6703 c.-599G>C upstream_gene_variant 0.45
gyrA 6709 c.-593A>G upstream_gene_variant 0.45
gyrA 6712 c.-590G>C upstream_gene_variant 0.45
gyrA 6730 c.-572A>C upstream_gene_variant 0.41
gyrA 6742 c.-560A>G upstream_gene_variant 0.4
gyrA 6745 c.-557T>G upstream_gene_variant 0.4
gyrB 6749 p.Ala504Ser missense_variant 0.4
gyrA 6760 c.-542G>C upstream_gene_variant 0.38
gyrA 6766 c.-536G>C upstream_gene_variant 0.41
gyrA 6793 c.-509T>C upstream_gene_variant 0.51
gyrB 6797 p.Gly520Ser missense_variant 0.55
gyrA 6805 c.-497G>T upstream_gene_variant 0.56
gyrA 6824 c.-478C>T upstream_gene_variant 0.56
gyrA 6844 c.-458T>C upstream_gene_variant 0.56
gyrA 6850 c.-452C>T upstream_gene_variant 0.54
gyrA 6853 c.-449A>G upstream_gene_variant 0.52
gyrA 6856 c.-446T>C upstream_gene_variant 0.54
gyrA 6859 c.-443T>C upstream_gene_variant 0.54
gyrA 6865 c.-437G>C upstream_gene_variant 0.57
gyrA 6866 c.-436C>T upstream_gene_variant 0.57
gyrA 6869 c.-433T>C upstream_gene_variant 0.52
gyrA 6872 c.-430T>C upstream_gene_variant 0.52
gyrA 6878 c.-424T>C upstream_gene_variant 0.57
gyrA 6881 c.-421T>C upstream_gene_variant 0.57
gyrA 6904 c.-398C>G upstream_gene_variant 0.55
gyrA 6910 c.-392G>A upstream_gene_variant 0.6
gyrA 6919 c.-383T>C upstream_gene_variant 0.62
gyrA 6925 c.-377T>C upstream_gene_variant 0.56
gyrA 6931 c.-371A>G upstream_gene_variant 0.47
gyrA 6949 c.-353A>G upstream_gene_variant 0.32
gyrA 6955 c.-347G>A upstream_gene_variant 0.32
gyrB 6960 p.Gln574Leu missense_variant 0.19
gyrB 6978 p.Phe580Tyr missense_variant 0.33
gyrA 6982 c.-320A>C upstream_gene_variant 0.36
gyrA 6991 c.-311C>T upstream_gene_variant 0.38
gyrA 6994 c.-308C>G upstream_gene_variant 0.39
gyrA 6997 c.-305G>A upstream_gene_variant 0.39
gyrA 7006 c.-296T>C upstream_gene_variant 0.33
gyrA 7015 c.-287G>A upstream_gene_variant 0.31
gyrA 7018 c.-284G>C upstream_gene_variant 0.31
gyrA 7027 c.-275G>A upstream_gene_variant 0.32
gyrA 7033 c.-269G>C upstream_gene_variant 0.31
gyrB 7051 p.Glu604Asp missense_variant 0.3
gyrA 7057 c.-245C>T upstream_gene_variant 0.3
gyrA 7060 c.-242T>C upstream_gene_variant 0.31
gyrA 7066 c.-236G>T upstream_gene_variant 0.3
gyrA 7075 c.-227T>C upstream_gene_variant 0.27
gyrA 7076 c.-226_-224delCTAinsTTG upstream_gene_variant 0.27
gyrA 7084 c.-218A>G upstream_gene_variant 0.34
gyrA 7093 c.-209T>C upstream_gene_variant 0.34
gyrA 7114 c.-188C>G upstream_gene_variant 0.44
gyrA 7123 c.-179C>T upstream_gene_variant 0.4
gyrA 7129 c.-173T>C upstream_gene_variant 0.31
gyrA 7132 c.-170T>G upstream_gene_variant 0.31
gyrA 7136 c.-166_-164delTTGinsCTA upstream_gene_variant 0.31
gyrA 7141 c.-161T>C upstream_gene_variant 0.31
gyrA 7147 c.-155G>C upstream_gene_variant 0.31
gyrA 7150 c.-152G>C upstream_gene_variant 0.31
gyrA 7153 c.-149G>C upstream_gene_variant 0.31
gyrA 7168 c.-134C>A upstream_gene_variant 0.38
gyrA 7171 c.-131C>T upstream_gene_variant 0.38
gyrA 7177 c.-125G>A upstream_gene_variant 0.37
gyrA 7178 c.-124_-122delTTGinsCTC upstream_gene_variant 0.38
gyrA 7186 c.-116C>G upstream_gene_variant 0.37
gyrA 7192 c.-110G>C upstream_gene_variant 0.42
gyrA 7213 c.-89G>C upstream_gene_variant 0.46
gyrA 7219 c.-83C>A upstream_gene_variant 0.46
gyrA 7240 c.-62C>G upstream_gene_variant 0.35
gyrA 7258 c.-44G>T upstream_gene_variant 0.2
gyrA 7280 c.-22T>G upstream_gene_variant 0.24
gyrA 7307 c.6A>C synonymous_variant 0.24
gyrA 7313 c.12G>C synonymous_variant 0.24
gyrA 7349 c.48A>G synonymous_variant 0.26
gyrA 7355 c.54T>C synonymous_variant 0.3
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.41
gyrA 7394 c.93T>C synonymous_variant 0.42
gyrA 7418 c.117C>G synonymous_variant 0.5
gyrA 7427 c.126G>C synonymous_variant 0.42
gyrA 7430 c.129G>A synonymous_variant 0.44
gyrA 7442 c.141G>C synonymous_variant 0.5
gyrA 7448 c.147G>A synonymous_variant 0.49
gyrA 7451 c.150C>G synonymous_variant 0.47
gyrA 7457 c.156T>C synonymous_variant 0.5
gyrA 7469 c.168C>G synonymous_variant 0.45
gyrA 7472 c.171T>C synonymous_variant 0.4
gyrA 7475 c.174A>C synonymous_variant 0.49
gyrA 7480 p.Phe60Tyr missense_variant 0.47
gyrA 7484 c.183T>C synonymous_variant 0.49
gyrA 7490 c.189C>A synonymous_variant 0.51
gyrA 7502 c.201C>T synonymous_variant 0.5
gyrA 7523 c.222C>G synonymous_variant 0.43
gyrA 7526 c.225G>C synonymous_variant 0.43
gyrA 7532 c.231T>C synonymous_variant 0.44
gyrA 7541 c.240C>G synonymous_variant 0.43
gyrA 7553 c.252C>T synonymous_variant 0.41
gyrA 7568 c.267C>T synonymous_variant 0.39
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7607 c.306C>G synonymous_variant 0.3
gyrA 7614 p.Leu105Met missense_variant 0.33
gyrA 7619 c.318C>G synonymous_variant 0.34
gyrA 7631 c.330G>C synonymous_variant 0.27
gyrA 7709 c.408G>T synonymous_variant 0.19
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 0.37
gyrA 7763 c.462T>G synonymous_variant 0.43
gyrA 7775 c.474C>G synonymous_variant 0.46
gyrA 7796 c.495G>A synonymous_variant 0.46
gyrA 7797 c.496_498delCTAinsTTG synonymous_variant 0.48
gyrA 7811 c.510C>T synonymous_variant 0.5
gyrA 7814 c.513C>T synonymous_variant 0.44
gyrA 7832 c.531G>C synonymous_variant 0.39
gyrA 7835 c.534A>G synonymous_variant 0.37
gyrA 7853 c.552C>G synonymous_variant 0.3
gyrA 7859 c.558A>C synonymous_variant 0.21
gyrA 8253 p.Ile318Leu missense_variant 0.27
gyrA 8258 c.957G>A synonymous_variant 0.31
gyrA 8264 c.963T>C synonymous_variant 0.3
gyrA 8283 p.Ile328Leu missense_variant 0.42
gyrA 8288 c.987T>C synonymous_variant 0.43
gyrA 8294 c.993T>C synonymous_variant 0.42
gyrA 8324 c.1023T>C synonymous_variant 0.48
gyrA 8339 c.1038A>G synonymous_variant 0.53
gyrA 8342 c.1041G>C synonymous_variant 0.53
gyrA 8345 c.1044C>T synonymous_variant 0.51
gyrA 8360 c.1059G>C synonymous_variant 0.51
gyrA 8369 c.1068G>A synonymous_variant 0.5
gyrA 8378 c.1077C>T synonymous_variant 0.5
gyrA 8393 c.1092T>C synonymous_variant 0.45
gyrA 8399 c.1098T>C synonymous_variant 0.46
gyrA 8405 c.1104C>T synonymous_variant 0.42
gyrA 8408 c.1107A>G synonymous_variant 0.4
gyrA 8417 c.1116C>G synonymous_variant 0.36
gyrA 8420 c.1119T>C synonymous_variant 0.33
gyrA 8433 p.Thr378Arg missense_variant 0.3
gyrA 8453 c.1152A>C synonymous_variant 0.33
gyrA 8459 c.1158G>A synonymous_variant 0.33
gyrA 8462 c.1161A>C synonymous_variant 0.32
gyrA 8471 c.1170T>C synonymous_variant 0.26
gyrA 8480 c.1179C>G synonymous_variant 0.25
gyrA 8486 c.1185T>C synonymous_variant 0.23
gyrA 8489 c.1188A>G synonymous_variant 0.23
gyrA 8504 c.1203G>C synonymous_variant 0.25
gyrA 8513 c.1212C>G synonymous_variant 0.2
gyrA 8516 c.1215T>C synonymous_variant 0.21
gyrA 8519 c.1218A>G synonymous_variant 0.2
gyrA 8531 c.1230G>A synonymous_variant 0.27
gyrA 8534 c.1233G>C synonymous_variant 0.28
gyrA 8540 c.1239C>G synonymous_variant 0.28
gyrA 8546 c.1245T>C synonymous_variant 0.27
gyrA 8556 p.Ala419Gln missense_variant 0.26
gyrA 8561 c.1260A>C synonymous_variant 0.32
gyrA 8580 p.Ile427Val missense_variant 0.35
gyrA 8588 c.1287G>A synonymous_variant 0.35
gyrA 8603 c.1302A>C synonymous_variant 0.38
gyrA 8619 c.1318T>C synonymous_variant 0.33
gyrA 8624 c.1323G>C synonymous_variant 0.33
gyrA 8627 c.1326C>G synonymous_variant 0.37
gyrA 8636 c.1335A>C synonymous_variant 0.34
gyrA 8642 c.1341A>G synonymous_variant 0.36
gyrA 8645 c.1344C>T synonymous_variant 0.37
gyrA 8672 c.1371A>G synonymous_variant 0.49
gyrA 8693 c.1392T>C synonymous_variant 0.5
gyrA 8696 c.1395G>C synonymous_variant 0.51
gyrA 8699 c.1398A>G synonymous_variant 0.5
gyrA 8706 c.1405C>T synonymous_variant 0.5
gyrA 8711 c.1410A>C synonymous_variant 0.5
gyrA 8726 c.1425G>A synonymous_variant 0.54
gyrA 8729 c.1428T>C synonymous_variant 0.54
gyrA 8730 p.Gly477Arg missense_variant 0.53
gyrA 8747 c.1446A>G synonymous_variant 0.51
gyrA 8750 c.1449C>G synonymous_variant 0.47
gyrA 8756 c.1455A>G synonymous_variant 0.47
gyrA 8762 c.1461G>C synonymous_variant 0.47
gyrA 8767 p.Arg489Lys missense_variant 0.5
gyrA 8783 c.1482G>T synonymous_variant 0.46
gyrA 8786 c.1485T>C synonymous_variant 0.46
gyrA 8791 c.1491G>C synonymous_variant 0.32
gyrA 8796 p.Ile499Val missense_variant 0.27
gyrA 8801 c.1500G>C synonymous_variant 0.26
gyrA 8810 c.1509A>G synonymous_variant 0.28
gyrA 8813 p.Asp504Glu missense_variant 0.31
gyrA 8828 c.1527T>C synonymous_variant 0.24
gyrA 8829 c.1528T>C synonymous_variant 0.24
gyrA 8837 c.1536C>G synonymous_variant 0.27
gyrA 8852 c.1551T>C synonymous_variant 0.31
gyrA 8858 c.1557T>C synonymous_variant 0.34
gyrA 8870 c.1569G>C synonymous_variant 0.33
gyrA 8873 c.1572A>G synonymous_variant 0.35
gyrA 8882 c.1581G>A synonymous_variant 0.39
gyrA 8897 c.1596T>C synonymous_variant 0.4
gyrA 8903 c.1602T>C synonymous_variant 0.43
gyrA 8924 c.1623C>A synonymous_variant 0.43
gyrA 8927 c.1626G>A synonymous_variant 0.43
gyrA 8930 c.1629C>G synonymous_variant 0.44
gyrA 8933 c.1632G>T synonymous_variant 0.44
gyrA 8939 c.1638T>G synonymous_variant 0.44
gyrA 8945 c.1644G>C synonymous_variant 0.45
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.45
gyrA 8975 c.1674C>T synonymous_variant 0.48
gyrA 8996 c.1695T>C synonymous_variant 0.41
gyrA 8998 p.Leu566Trp missense_variant 0.41
gyrA 9016 p.Thr572Ser missense_variant 0.41
gyrA 9023 c.1722A>C synonymous_variant 0.4
gyrA 9029 c.1728T>C synonymous_variant 0.41
gyrA 9050 p.Asp583Glu missense_variant 0.35
gyrA 9056 c.1755C>G synonymous_variant 0.33
gyrA 9063 p.Ser588Ala missense_variant 0.31
gyrA 9068 c.1767G>C synonymous_variant 0.31
gyrA 9080 c.1779G>C synonymous_variant 0.31
gyrA 9086 c.1785C>T synonymous_variant 0.32
gyrA 9089 c.1788G>A synonymous_variant 0.38
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.33
gyrA 9104 c.1803C>A synonymous_variant 0.37
gyrA 9113 c.1812C>G synonymous_variant 0.39
gyrA 9119 c.1818A>G synonymous_variant 0.39
gyrA 9139 p.Gln613Arg missense_variant 0.37
gyrA 9143 c.1842T>C synonymous_variant 0.35
gyrA 9147 p.Gly616Ser missense_variant 0.34
gyrA 9167 c.1866C>T synonymous_variant 0.35
gyrA 9174 c.1873C>T synonymous_variant 0.33
gyrA 9182 c.1881T>G synonymous_variant 0.34
gyrA 9191 c.1890G>T synonymous_variant 0.33
gyrA 9192 c.1891C>T synonymous_variant 0.34
gyrA 9200 c.1899A>G synonymous_variant 0.39
gyrA 9208 p.Lys636Arg missense_variant 0.41
gyrA 9212 c.1911G>C synonymous_variant 0.39
gyrA 9218 p.Asp639Glu missense_variant 0.39
gyrA 9224 c.1923C>T synonymous_variant 0.41
gyrA 9230 c.1929T>C synonymous_variant 0.42
gyrA 9233 c.1932C>G synonymous_variant 0.42
gyrA 9242 c.1941A>G synonymous_variant 0.44
gyrA 9245 c.1944C>T synonymous_variant 0.44
gyrA 9252 p.Val651Ile missense_variant 0.44
gyrA 9267 p.Asn656Gly missense_variant 0.45
gyrA 9275 c.1974G>A synonymous_variant 0.46
gyrA 9278 c.1977G>T synonymous_variant 0.45
gyrA 9284 c.1983T>C synonymous_variant 0.45
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9323 c.2022C>G synonymous_variant 0.44
gyrA 9332 c.2031C>T synonymous_variant 0.44
gyrA 9335 c.2034G>C synonymous_variant 0.41
gyrA 9345 c.2044A>C synonymous_variant 0.36
gyrA 9356 c.2055G>A synonymous_variant 0.29
gyrA 9358 p.Thr686Asn missense_variant 0.29
gyrA 9365 c.2064G>A synonymous_variant 0.3
gyrA 9369 c.2068C>T synonymous_variant 0.28
gyrA 9377 c.2076A>G synonymous_variant 0.26
gyrA 9383 c.2082T>C synonymous_variant 0.24
gyrA 9386 c.2085T>A synonymous_variant 0.2
gyrA 9395 c.2094G>C synonymous_variant 0.19
fgd1 490809 c.27A>G synonymous_variant 0.2
fgd1 490812 c.30A>G synonymous_variant 0.17
fgd1 490818 c.36C>G synonymous_variant 0.17
fgd1 491133 c.351A>C synonymous_variant 0.24
fgd1 491181 c.399T>C synonymous_variant 0.21
fgd1 491202 c.420G>C synonymous_variant 0.2
fgd1 491203 p.Gln141Glu missense_variant 0.2
fgd1 491212 p.Ser144Arg missense_variant 0.25
fgd1 491217 c.435T>G synonymous_variant 0.28
fgd1 491223 c.441C>G synonymous_variant 0.28
fgd1 491226 c.444C>G synonymous_variant 0.3
fgd1 491232 c.450T>C synonymous_variant 0.33
fgd1 491244 c.462T>C synonymous_variant 0.32
fgd1 491249 p.Arg156His missense_variant 0.29
fgd1 491259 c.477T>C synonymous_variant 0.29
fgd1 491262 c.480C>G synonymous_variant 0.29
fgd1 491277 c.495G>C synonymous_variant 0.26
fgd1 491283 p.Asp167Glu missense_variant 0.26
fgd1 491286 c.504G>C synonymous_variant 0.28
fgd1 491289 c.507C>G synonymous_variant 0.28
fgd1 491295 c.513C>G synonymous_variant 0.29
fgd1 491296 p.Val172Ile missense_variant 0.29
fgd1 491302 p.Ile174Val missense_variant 0.3
fgd1 491310 c.528C>G synonymous_variant 0.32
fgd1 491331 c.549G>A synonymous_variant 0.3
fgd1 491340 c.558C>A synonymous_variant 0.32
fgd1 491343 c.561C>G synonymous_variant 0.35
fgd1 491349 c.567T>C synonymous_variant 0.26
fgd1 491355 c.573C>G synonymous_variant 0.19
fgd1 491453 p.Gly224Asp missense_variant 0.18
fgd1 491472 c.690A>G synonymous_variant 0.23
fgd1 491496 c.714C>T synonymous_variant 0.28
fgd1 491499 c.717G>C synonymous_variant 0.3
fgd1 491508 c.726A>G synonymous_variant 0.33
fgd1 491509 c.727T>C synonymous_variant 0.33
fgd1 491512 p.Asn244Glu missense_variant 0.33
fgd1 491526 c.744T>C synonymous_variant 0.42
fgd1 491542 c.760T>C synonymous_variant 0.41
fgd1 491547 c.765A>C synonymous_variant 0.42
fgd1 491550 c.768T>C synonymous_variant 0.41
fgd1 491556 c.774G>A synonymous_variant 0.41
fgd1 491559 c.777G>A synonymous_variant 0.42
fgd1 491595 c.813C>G synonymous_variant 0.25
fgd1 491610 c.828A>G synonymous_variant 0.23
fgd1 491620 p.Ile280Val missense_variant 0.24
fgd1 491640 c.858G>C synonymous_variant 0.21
fgd1 491643 c.861G>T synonymous_variant 0.2
fgd1 491649 c.867C>T synonymous_variant 0.21
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575532 p.Thr62Ile missense_variant 0.18
mshA 575536 c.189T>C synonymous_variant 0.18
mshA 575539 c.192C>T synonymous_variant 0.17
mshA 575548 c.201C>G synonymous_variant 0.21
mshA 575561 p.Met72Val missense_variant 0.25
mshA 575571 p.Ser75Thr missense_variant 0.25
mshA 575581 c.234C>T synonymous_variant 0.24
mshA 575582 c.235C>T synonymous_variant 0.24
mshA 575590 c.243T>C synonymous_variant 0.29
mshA 575593 c.246G>C synonymous_variant 0.29
mshA 575596 c.249C>G synonymous_variant 0.29
mshA 575597 p.Ile84Val missense_variant 0.29
mshA 575626 c.279C>G synonymous_variant 0.39
mshA 575629 c.282A>G synonymous_variant 0.41
mshA 575633 p.Ala96Thr missense_variant 0.38
mshA 575645 p.Val100Thr missense_variant 0.36
mshA 575652 p.Arg102Gln missense_variant 0.41
mshA 575656 c.309G>C synonymous_variant 0.42
mshA 575659 c.312A>G synonymous_variant 0.44
mshA 575674 c.327G>C synonymous_variant 0.45
mshA 575689 c.342G>C synonymous_variant 0.28
mshA 575692 c.345G>T synonymous_variant 0.28
mshA 575695 c.348C>G synonymous_variant 0.26
mshA 575701 c.354G>A synonymous_variant 0.26
mshA 575704 c.357T>C synonymous_variant 0.28
mshA 575705 c.358_360delTTGinsCTC synonymous_variant 0.28
mshA 575713 c.366G>A synonymous_variant 0.3
mshA 575734 c.387T>G synonymous_variant 0.4
mshA 575752 c.405G>A synonymous_variant 0.35
mshA 575756 c.409C>T synonymous_variant 0.35
mshA 575764 c.417C>A synonymous_variant 0.29
mshA 575767 c.420G>A synonymous_variant 0.29
mshA 575772 p.Val142Ala missense_variant 0.29
mshA 575779 c.432A>G synonymous_variant 0.3
mshA 575782 c.435G>C synonymous_variant 0.3
mshA 575785 c.438T>C synonymous_variant 0.32
mshA 575788 c.441C>T synonymous_variant 0.33
mshA 575816 c.469C>T synonymous_variant 0.34
mshA 575821 c.474G>C synonymous_variant 0.35
mshA 575824 c.477T>G synonymous_variant 0.36
mshA 575830 c.483C>A synonymous_variant 0.37
mshA 575842 c.495G>C synonymous_variant 0.36
mshA 575845 c.498C>G synonymous_variant 0.38
mshA 575864 c.517T>C synonymous_variant 0.37
mshA 575869 c.522G>A synonymous_variant 0.37
mshA 575878 c.531A>G synonymous_variant 0.25
mshA 575907 p.Ala187Val missense_variant 0.88
mshA 575924 p.Gly193Arg missense_variant 0.17
ccsA 620361 c.471C>T synonymous_variant 0.17
ccsA 620619 c.729G>T synonymous_variant 0.26
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620631 c.741T>C synonymous_variant 0.32
ccsA 620634 c.744C>G synonymous_variant 0.32
ccsA 620647 p.Glu253Gln missense_variant 0.37
ccsA 620676 c.786C>T synonymous_variant 0.42
ccsA 620685 c.795G>A synonymous_variant 0.41
ccsA 620694 c.804C>G synonymous_variant 0.4
ccsA 620697 c.807C>T synonymous_variant 0.41
ccsA 620712 c.822G>C synonymous_variant 0.39
ccsA 620721 c.831G>C synonymous_variant 0.39
ccsA 620733 c.843G>C synonymous_variant 0.41
ccsA 620734 c.844C>A synonymous_variant 0.4
ccsA 620739 c.849A>G synonymous_variant 0.4
ccsA 620748 c.858T>A synonymous_variant 0.52
ccsA 620754 c.864G>C synonymous_variant 0.47
ccsA 620760 c.870C>G synonymous_variant 0.54
ccsA 620766 c.876C>G synonymous_variant 0.5
ccsA 620778 c.888T>C synonymous_variant 0.33
ccsA 620783 p.Ala298Val missense_variant 0.33
ccsA 620787 c.897C>G synonymous_variant 0.33
rpoB 759616 c.-191C>T upstream_gene_variant 0.23
rpoB 759624 c.-183G>A upstream_gene_variant 0.2
rpoB 759629 c.-178T>C upstream_gene_variant 0.21
rpoB 759647 c.-160T>C upstream_gene_variant 0.19
rpoB 759656 c.-151A>C upstream_gene_variant 0.19
rpoB 759671 c.-136G>C upstream_gene_variant 0.18
rpoB 759681 c.-126C>T upstream_gene_variant 0.18
rpoB 759694 c.-113C>T upstream_gene_variant 0.18
rpoB 760034 c.228A>G synonymous_variant 0.18
rpoB 760037 c.231G>C synonymous_variant 0.18
rpoB 760059 p.Tyr85Glu missense_variant 0.24
rpoB 760064 c.258G>A synonymous_variant 0.24
rpoB 760067 c.261G>C synonymous_variant 0.25
rpoB 760070 c.264T>G synonymous_variant 0.24
rpoB 760091 c.285G>C synonymous_variant 0.31
rpoB 760101 c.295T>C synonymous_variant 0.44
rpoB 760106 c.300G>C synonymous_variant 0.47
rpoB 760112 c.306T>C synonymous_variant 0.47
rpoB 760121 c.315T>C synonymous_variant 0.49
rpoB 760130 p.Asp108Glu missense_variant 0.45
rpoB 760136 c.330G>A synonymous_variant 0.43
rpoB 760139 c.333A>C synonymous_variant 0.43
rpoB 760174 p.Tyr123Phe missense_variant 0.49
rpoB 760181 c.375T>C synonymous_variant 0.5
rpoB 760184 c.378A>G synonymous_variant 0.51
rpoB 760199 c.393C>G synonymous_variant 0.51
rpoB 760223 c.417T>C synonymous_variant 0.58
rpoB 760235 c.429T>C synonymous_variant 0.57
rpoB 760253 c.447T>C synonymous_variant 0.48
rpoB 760274 c.468G>A synonymous_variant 0.5
rpoB 760307 c.501T>G synonymous_variant 0.53
rpoB 760310 c.504G>C synonymous_variant 0.54
rpoB 760331 c.525G>C synonymous_variant 0.55
rpoB 760361 c.555T>C synonymous_variant 0.56
rpoB 760370 c.564C>G synonymous_variant 0.55
rpoB 760376 p.Asp190Glu missense_variant 0.52
rpoB 760389 c.583_585delAGCinsTCG synonymous_variant 0.49
rpoB 760403 c.597C>T synonymous_variant 0.48
rpoB 760406 c.600G>C synonymous_variant 0.47
rpoB 760424 c.618C>G synonymous_variant 0.49
rpoB 760430 c.624T>C synonymous_variant 0.51
rpoB 760436 c.630C>G synonymous_variant 0.51
rpoB 760451 c.645C>G synonymous_variant 0.5
rpoB 760475 c.669A>G synonymous_variant 0.49
rpoB 760481 c.675G>C synonymous_variant 0.48
rpoB 760484 c.678A>G synonymous_variant 0.49
rpoB 760493 c.687C>T synonymous_variant 0.49
rpoB 760497 c.691C>T synonymous_variant 0.48
rpoB 760522 p.Ser239Asn missense_variant 0.4
rpoB 760526 c.720G>A synonymous_variant 0.41
rpoB 760532 c.726T>C synonymous_variant 0.4
rpoB 760533 p.Val243Thr missense_variant 0.4
rpoB 760547 c.741G>C synonymous_variant 0.46
rpoB 760563 p.Arg253Met missense_variant 0.39
rpoB 760597 p.Thr264Ser missense_variant 0.36
rpoB 760604 p.Glu266Asp missense_variant 0.33
rpoB 760608 c.802C>T synonymous_variant 0.33
rpoB 760611 c.805T>C synonymous_variant 0.32
rpoB 760634 c.828T>G synonymous_variant 0.32
rpoB 760643 c.837G>A synonymous_variant 0.35
rpoB 760646 c.840C>G synonymous_variant 0.36
rpoB 760655 c.849A>G synonymous_variant 0.34
rpoB 760661 c.855A>G synonymous_variant 0.33
rpoB 760670 c.864G>C synonymous_variant 0.31
rpoB 760674 c.868T>C synonymous_variant 0.31
rpoB 760679 c.873A>G synonymous_variant 0.29
rpoB 760683 c.877T>C synonymous_variant 0.29
rpoB 760718 c.912C>G synonymous_variant 0.17
rpoB 760721 c.915C>G synonymous_variant 0.18
rpoB 760724 c.918T>C synonymous_variant 0.17
rpoB 760796 c.990A>G synonymous_variant 0.24
rpoB 760805 c.999G>C synonymous_variant 0.25
rpoB 760820 c.1014T>C synonymous_variant 0.38
rpoB 760826 c.1020C>G synonymous_variant 0.45
rpoB 760841 c.1035T>G synonymous_variant 0.46
rpoB 760844 p.Gln346His missense_variant 0.44
rpoB 760845 p.Thr347Ala missense_variant 0.44
rpoB 760855 p.Thr350Lys missense_variant 0.42
rpoB 760859 c.1053T>C synonymous_variant 0.44
rpoB 760862 c.1056G>C synonymous_variant 0.42
rpoB 760865 c.1059C>T synonymous_variant 0.39
rpoB 760886 c.1080A>G synonymous_variant 0.48
rpoB 760916 c.1110C>G synonymous_variant 0.51
rpoB 760919 c.1113C>G synonymous_variant 0.53
rpoB 760925 c.1119T>C synonymous_variant 0.54
rpoB 760971 c.1165C>A synonymous_variant 0.51
rpoB 760991 c.1185G>C synonymous_variant 0.53
rpoB 761006 c.1200C>T synonymous_variant 0.53
rpoB 761015 c.1209G>C synonymous_variant 0.57
rpoB 761027 c.1221A>C synonymous_variant 0.55
rpoB 761036 c.1230G>C synonymous_variant 0.5
rpoB 761051 c.1245G>C synonymous_variant 0.51
rpoB 761054 c.1248G>C synonymous_variant 0.52
rpoB 761060 c.1254C>G synonymous_variant 0.56
rpoB 761096 c.1290G>C synonymous_variant 0.42
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.42
rpoB 761102 c.1296A>G synonymous_variant 0.43
rpoB 761111 c.1305C>T synonymous_variant 0.42
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 0.43
rpoB 761147 c.1341C>G synonymous_variant 0.41
rpoB 761150 c.1344A>G synonymous_variant 0.41
rpoB 761153 c.1347G>C synonymous_variant 0.41
rpoB 761162 c.1356G>T synonymous_variant 0.38
rpoB 761165 c.1359G>T synonymous_variant 0.38
rpoB 761168 c.1362C>G synonymous_variant 0.39
rpoB 761180 c.1374A>G synonymous_variant 0.34
rpoB 761183 c.1377T>C synonymous_variant 0.38
rpoB 761189 c.1383T>G synonymous_variant 0.4
rpoB 761207 c.1401C>T synonymous_variant 0.41
rpoB 761217 p.Pro471Ser missense_variant 0.4
rpoB 761220 c.1414_1416delTCGinsAGC synonymous_variant 0.4
rpoB 761255 c.1449T>G synonymous_variant 0.42
rpoB 761261 c.1455G>C synonymous_variant 0.38
rpoB 761264 c.1458C>G synonymous_variant 0.39
rpoB 761274 c.1468C>T synonymous_variant 0.41
rpoB 761314 p.Phe503Tyr missense_variant 0.39
rpoB 761324 c.1518C>T synonymous_variant 0.43
rpoB 761327 c.1521A>G synonymous_variant 0.4
rpoB 761333 c.1527G>T synonymous_variant 0.43
rpoB 761349 p.Asp515Asn missense_variant 0.36
rpoB 761360 c.1554T>C synonymous_variant 0.39
rpoB 761362 p.Ser519Thr missense_variant 0.4
rpoB 761405 c.1599C>T synonymous_variant 0.36
rpoB 761414 c.1608A>G synonymous_variant 0.37
rpoB 761423 c.1617T>C synonymous_variant 0.36
rpoB 761435 c.1629T>C synonymous_variant 0.33
rpoB 761437 p.Ala544Glu missense_variant 0.35
rpoB 761441 c.1635C>T synonymous_variant 0.35
rpoB 761444 c.1638T>C synonymous_variant 0.35
rpoB 761451 p.Val549Thr missense_variant 0.33
rpoB 761462 c.1656C>G synonymous_variant 0.35
rpoB 761471 c.1665C>G synonymous_variant 0.31
rpoB 761482 p.Ala559Gly missense_variant 0.25
rpoB 761486 c.1680C>G synonymous_variant 0.29
rpoB 761492 c.1686G>C synonymous_variant 0.28
rpoB 761502 p.Pro566Ser missense_variant 0.32
rpoB 761507 c.1701G>C synonymous_variant 0.29
rpoB 761510 c.1704T>C synonymous_variant 0.28
rpoB 761537 c.1731C>G synonymous_variant 0.35
rpoB 761570 c.1764T>C synonymous_variant 0.35
rpoB 761573 c.1767C>G synonymous_variant 0.36
rpoB 761579 c.1773G>C synonymous_variant 0.37
rpoB 761600 c.1794T>C synonymous_variant 0.35
rpoB 761603 c.1797C>G synonymous_variant 0.35
rpoB 761604 c.1798_1800delCTCinsTTG synonymous_variant 0.34
rpoB 761612 c.1806G>C synonymous_variant 0.35
rpoB 761615 c.1809A>G synonymous_variant 0.37
rpoB 761633 c.1827G>C synonymous_variant 0.37
rpoB 761636 c.1830G>T synonymous_variant 0.37
rpoB 761640 c.1834C>T synonymous_variant 0.36
rpoB 761645 c.1839C>G synonymous_variant 0.38
rpoB 761657 c.1851C>A synonymous_variant 0.31
rpoB 761681 c.1875G>A synonymous_variant 0.21
rpoB 761682 c.1876C>T synonymous_variant 0.21
rpoB 761690 c.1884G>T synonymous_variant 0.23
rpoB 761714 c.1908C>G synonymous_variant 0.24
rpoB 761723 p.Glu639Asp missense_variant 0.23
rpoB 761726 p.Glu640Asp missense_variant 0.23
rpoB 761732 c.1926C>T synonymous_variant 0.23
rpoB 761736 p.Ile644Val missense_variant 0.22
rpoB 761765 c.1959T>G synonymous_variant 0.2
rpoB 761772 p.His656Thr missense_variant 0.19
rpoB 761778 p.Asn658Asp missense_variant 0.2
rpoB 761802 p.Met666Leu missense_variant 0.19
rpoB 761813 c.2007T>C synonymous_variant 0.23
rpoB 761828 c.2022C>T synonymous_variant 0.29
rpoB 761834 c.2028T>C synonymous_variant 0.33
rpoB 761847 p.Cys681Arg missense_variant 0.34
rpoB 761852 c.2046C>G synonymous_variant 0.36
rpoB 761858 c.2052G>C synonymous_variant 0.37
rpoB 761864 c.2058G>C synonymous_variant 0.38
rpoB 761867 c.2061C>G synonymous_variant 0.38
rpoB 761873 c.2067A>G synonymous_variant 0.39
rpoB 761876 c.2070C>G synonymous_variant 0.39
rpoB 761885 c.2079T>G synonymous_variant 0.42
rpoB 761903 c.2097T>C synonymous_variant 0.45
rpoB 761906 c.2100C>G synonymous_variant 0.44
rpoB 761909 c.2103T>C synonymous_variant 0.43
rpoB 761912 c.2106T>C synonymous_variant 0.46
rpoB 761915 p.Asp703Glu missense_variant 0.45
rpoB 761916 p.Asp704His missense_variant 0.45
rpoB 761945 c.2139G>T synonymous_variant 0.53
rpoB 761951 c.2145G>C synonymous_variant 0.53
rpoB 761954 c.2148C>G synonymous_variant 0.53
rpoB 761972 c.2166C>G synonymous_variant 0.53
rpoB 761997 p.Leu731Ile missense_variant 0.46
rpoB 762008 c.2202C>G synonymous_variant 0.51
rpoB 762011 c.2205G>C synonymous_variant 0.5
rpoB 762017 c.2211A>G synonymous_variant 0.49
rpoB 762024 p.Val740Ile missense_variant 0.46
rpoB 762050 c.2244G>A synonymous_variant 0.45
rpoB 762053 c.2247T>C synonymous_variant 0.47
rpoB 762062 c.2256T>C synonymous_variant 0.5
rpoB 762065 c.2259T>C synonymous_variant 0.51
rpoB 762086 c.2280G>C synonymous_variant 0.5
rpoB 762110 c.2304G>C synonymous_variant 0.46
rpoB 762114 p.Ile770Val missense_variant 0.48
rpoB 762122 c.2316C>T synonymous_variant 0.46
rpoB 762131 c.2325C>G synonymous_variant 0.44
rpoB 762140 c.2334G>C synonymous_variant 0.41
rpoB 762143 c.2337T>C synonymous_variant 0.41
rpoB 762149 c.2343G>T synonymous_variant 0.4
rpoB 762167 c.2361T>C synonymous_variant 0.39
rpoB 762176 c.2370T>C synonymous_variant 0.37
rpoB 762185 c.2379G>C synonymous_variant 0.37
rpoB 762192 c.2386C>T synonymous_variant 0.37
rpoB 762218 c.2412T>G synonymous_variant 0.38
rpoB 762233 c.2427G>C synonymous_variant 0.4
rpoB 762254 c.2448T>G synonymous_variant 0.37
rpoB 762257 c.2451C>A synonymous_variant 0.34
rpoB 762266 c.2460T>C synonymous_variant 0.35
rpoB 762284 c.2478G>C synonymous_variant 0.4
rpoB 762297 c.2491C>T synonymous_variant 0.35
rpoB 762317 c.2511A>G synonymous_variant 0.36
rpoB 762329 c.2523G>C synonymous_variant 0.42
rpoB 762338 c.2532T>C synonymous_variant 0.4
rpoB 762347 c.2541T>C synonymous_variant 0.44
rpoB 762362 p.Glu852Asp missense_variant 0.42
rpoB 762369 c.2563T>C synonymous_variant 0.4
rpoC 762380 c.-990T>G upstream_gene_variant 0.35
rpoC 762395 c.-975G>C upstream_gene_variant 0.28
rpoC 762398 c.-972T>C upstream_gene_variant 0.28
rpoC 762401 c.-969G>C upstream_gene_variant 0.27
rpoC 762404 c.-966T>C upstream_gene_variant 0.28
rpoC 762410 c.-960T>G upstream_gene_variant 0.29
rpoC 762434 c.-936T>C upstream_gene_variant 0.25
rpoC 762482 c.-888C>T upstream_gene_variant 0.27
rpoC 762491 c.-879T>C upstream_gene_variant 0.28
rpoC 762509 c.-861T>G upstream_gene_variant 0.31
rpoB 762510 p.Ala902Pro missense_variant 0.31
rpoC 762533 c.-837T>C upstream_gene_variant 0.4
rpoC 762536 c.-834T>C upstream_gene_variant 0.4
rpoC 762537 c.-833_-831delTTGinsCTC upstream_gene_variant 0.4
rpoC 762542 c.-828C>T upstream_gene_variant 0.4
rpoC 762548 c.-822C>T upstream_gene_variant 0.4
rpoC 762551 c.-819C>G upstream_gene_variant 0.42
rpoC 762581 c.-789T>C upstream_gene_variant 0.41
rpoC 762605 c.-765T>C upstream_gene_variant 0.31
rpoB 762624 p.Val940Ile missense_variant 0.23
rpoB 762630 p.Ala942Thr missense_variant 0.21
rpoB 762633 p.Ala943Ser missense_variant 0.19
rpoB 762799 p.Ala998Gly missense_variant 0.37
rpoC 762812 c.-558C>G upstream_gene_variant 0.39
rpoB 762814 p.Met1003Thr missense_variant 0.38
rpoC 762818 c.-552C>G upstream_gene_variant 0.4
rpoC 762831 c.-539_-538delAGinsTC upstream_gene_variant 0.42
rpoC 762836 c.-534C>T upstream_gene_variant 0.42
rpoC 762857 c.-513C>G upstream_gene_variant 0.48
rpoC 762863 c.-507T>C upstream_gene_variant 0.48
rpoC 762899 c.-471G>C upstream_gene_variant 0.49
rpoC 762929 c.-441G>C upstream_gene_variant 0.49
rpoC 762989 c.-381G>C upstream_gene_variant 0.46
rpoC 762995 c.-375G>C upstream_gene_variant 0.48
rpoC 763028 c.-342T>C upstream_gene_variant 0.48
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 0.51
rpoC 763053 c.-317T>C upstream_gene_variant 0.53
rpoC 763058 c.-312C>G upstream_gene_variant 0.53
rpoC 763070 c.-300T>C upstream_gene_variant 0.51
rpoC 763082 c.-288C>G upstream_gene_variant 0.51
rpoC 763085 c.-285C>G upstream_gene_variant 0.52
rpoC 763115 c.-255T>C upstream_gene_variant 0.51
rpoC 763127 c.-243G>C upstream_gene_variant 0.49
rpoC 763139 c.-231C>T upstream_gene_variant 0.47
rpoC 763169 c.-201A>G upstream_gene_variant 0.44
rpoC 763202 c.-168A>G upstream_gene_variant 0.21
rpoC 763408 c.39T>C synonymous_variant 0.33
rpoC 763411 c.42T>G synonymous_variant 0.33
rpoC 763414 c.45T>C synonymous_variant 0.35
rpoC 763423 p.Glu18Asp missense_variant 0.38
rpoC 763441 c.72C>G synonymous_variant 0.42
rpoC 763444 c.75T>C synonymous_variant 0.43
rpoC 763456 c.87A>G synonymous_variant 0.48
rpoC 763468 c.99G>C synonymous_variant 0.55
rpoC 763486 c.117T>C synonymous_variant 0.52
rpoC 763489 c.120G>A synonymous_variant 0.52
rpoC 763528 c.159G>A synonymous_variant 0.52
rpoC 763546 c.177A>G synonymous_variant 0.53
rpoC 763552 c.183C>T synonymous_variant 0.59
rpoC 763561 c.192G>A synonymous_variant 0.61
rpoC 763570 c.201G>T synonymous_variant 0.62
rpoC 763573 c.204G>C synonymous_variant 0.62
rpoC 763594 c.225C>T synonymous_variant 0.58
rpoC 763606 c.237C>A synonymous_variant 0.54
rpoC 763609 c.240C>G synonymous_variant 0.52
rpoC 763615 c.246G>C synonymous_variant 0.53
rpoC 763633 c.264T>C synonymous_variant 0.5
rpoC 763636 c.267T>C synonymous_variant 0.52
rpoC 763654 c.285C>T synonymous_variant 0.46
rpoC 763660 c.291T>G synonymous_variant 0.4
rpoC 763666 c.297G>A synonymous_variant 0.39
rpoC 763669 c.300C>G synonymous_variant 0.42
rpoC 763696 c.327T>C synonymous_variant 0.48
rpoC 763702 c.333C>T synonymous_variant 0.46
rpoC 763723 c.354G>C synonymous_variant 0.39
rpoC 763726 c.357C>T synonymous_variant 0.39
rpoC 763727 c.358C>T synonymous_variant 0.39
rpoC 763732 c.363C>G synonymous_variant 0.38
rpoC 763735 c.366G>C synonymous_variant 0.38
rpoC 763741 c.372C>T synonymous_variant 0.38
rpoC 763765 c.396T>G synonymous_variant 0.37
rpoC 763768 c.399C>G synonymous_variant 0.35
rpoC 763771 c.402C>T synonymous_variant 0.35
rpoC 763774 c.405G>C synonymous_variant 0.35
rpoC 763781 p.Ser138Asp missense_variant 0.37
rpoC 763796 p.Met143Leu missense_variant 0.39
rpoC 763807 c.438T>C synonymous_variant 0.4
rpoC 763813 c.444C>G synonymous_variant 0.45
rpoC 763825 c.456G>A synonymous_variant 0.28
rpoC 763831 c.462A>G synonymous_variant 0.28
rpoC 763872 p.Gly168Ala missense_variant 0.22
rpoC 763876 c.507A>G synonymous_variant 0.23
rpoC 763879 c.510A>G synonymous_variant 0.23
rpoC 763885 c.516C>G synonymous_variant 0.23
rpoC 763888 c.519G>T synonymous_variant 0.23
rpoC 763891 c.522G>C synonymous_variant 0.23
rpoC 763894 c.525A>G synonymous_variant 0.22
rpoC 763903 c.534G>A synonymous_variant 0.25
rpoC 763916 p.Glu183Gln missense_variant 0.25
rpoC 763933 c.564C>T synonymous_variant 0.3
rpoC 763939 c.570G>A synonymous_variant 0.32
rpoC 763978 c.609C>G synonymous_variant 0.49
rpoC 763996 c.627T>C synonymous_variant 0.5
rpoC 764024 c.655T>C synonymous_variant 0.51
rpoC 764027 p.Glu220Gln missense_variant 0.52
rpoC 764032 p.Asp221Glu missense_variant 0.49
rpoC 764039 p.Ser224Asp missense_variant 0.47
rpoC 764044 c.675T>C synonymous_variant 0.49
rpoC 764059 c.690G>C synonymous_variant 0.5
rpoC 764068 c.699G>A synonymous_variant 0.46
rpoC 764071 c.702G>C synonymous_variant 0.44
rpoC 764083 c.714A>G synonymous_variant 0.49
rpoC 764101 c.732C>G synonymous_variant 0.46
rpoC 764131 c.762T>C synonymous_variant 0.49
rpoC 764140 c.771C>T synonymous_variant 0.52
rpoC 764147 p.Ser260Ala missense_variant 0.48
rpoC 764161 c.792G>C synonymous_variant 0.49
rpoC 764195 p.Ser276Ala missense_variant 0.55
rpoC 764203 c.834G>C synonymous_variant 0.55
rpoC 764206 p.Asp279Glu missense_variant 0.54
rpoC 764209 c.840C>T synonymous_variant 0.53
rpoC 764245 c.876C>T synonymous_variant 0.54
rpoC 764255 c.886C>T synonymous_variant 0.5
rpoC 764266 c.897T>G synonymous_variant 0.52
rpoC 764269 c.900G>T synonymous_variant 0.49
rpoC 764278 c.909A>G synonymous_variant 0.46
rpoC 764285 p.Gly306Ser missense_variant 0.43
rpoC 764317 c.948C>A synonymous_variant 0.33
rpoC 764320 c.951C>G synonymous_variant 0.31
rpoC 764338 c.969G>A synonymous_variant 0.27
rpoC 764344 c.975C>G synonymous_variant 0.27
rpoC 764365 c.996C>T synonymous_variant 0.24
rpoC 764428 c.1059G>C synonymous_variant 0.27
rpoC 764431 c.1062G>C synonymous_variant 0.27
rpoC 764434 c.1065A>G synonymous_variant 0.27
rpoC 764435 c.1066A>C synonymous_variant 0.27
rpoC 764449 c.1080G>C synonymous_variant 0.29
rpoC 764452 c.1083T>C synonymous_variant 0.31
rpoC 764455 c.1086G>C synonymous_variant 0.32
rpoC 764458 c.1089G>C synonymous_variant 0.32
rpoC 764461 c.1092A>G synonymous_variant 0.35
rpoC 764497 c.1128A>G synonymous_variant 0.4
rpoC 764500 c.1131C>G synonymous_variant 0.39
rpoC 764521 c.1152T>C synonymous_variant 0.44
rpoC 764536 c.1167G>C synonymous_variant 0.46
rpoC 764539 c.1170C>G synonymous_variant 0.46
rpoC 764554 c.1185C>T synonymous_variant 0.43
rpoC 764560 c.1191T>C synonymous_variant 0.39
rpoC 764566 c.1197C>G synonymous_variant 0.38
rpoC 764570 c.1203_1204delGC frameshift_variant 0.39
rpoC 764611 c.1242G>T synonymous_variant 0.47
rpoC 764632 c.1263T>C synonymous_variant 0.41
rpoC 764650 c.1281G>C synonymous_variant 0.38
rpoC 764656 c.1287C>G synonymous_variant 0.39
rpoC 764680 c.1311G>A synonymous_variant 0.36
rpoC 764695 c.1326T>C synonymous_variant 0.4
rpoC 764713 c.1344G>A synonymous_variant 0.45
rpoC 764716 c.1347G>C synonymous_variant 0.46
rpoC 764752 c.1383G>C synonymous_variant 0.49
rpoC 764755 c.1386C>T synonymous_variant 0.49
rpoC 764764 c.1395T>C synonymous_variant 0.49
rpoC 764770 c.1401G>A synonymous_variant 0.49
rpoC 764782 c.1413C>T synonymous_variant 0.5
rpoC 764791 c.1422C>G synonymous_variant 0.56
rpoC 764803 c.1434C>T synonymous_variant 0.55
rpoC 764812 c.1443C>G synonymous_variant 0.53
rpoC 764858 c.1489T>C synonymous_variant 0.53
rpoC 764861 c.1492C>T synonymous_variant 0.54
rpoC 764875 c.1506C>G synonymous_variant 0.52
rpoC 764888 c.1519T>C synonymous_variant 0.48
rpoC 764893 c.1524T>C synonymous_variant 0.48
rpoC 764902 c.1533C>T synonymous_variant 0.46
rpoC 764918 p.Val517Ile missense_variant 0.41
rpoC 764932 c.1563C>G synonymous_variant 0.43
rpoC 764948 c.1579T>C synonymous_variant 0.4
rpoC 764968 c.1599T>C synonymous_variant 0.4
rpoC 764986 c.1617C>T synonymous_variant 0.4
rpoC 764995 c.1626C>G synonymous_variant 0.38
rpoC 765007 c.1638T>G synonymous_variant 0.31
rpoC 765019 c.1650A>G synonymous_variant 0.33
rpoC 765034 c.1665T>C synonymous_variant 0.36
rpoC 765040 c.1671T>C synonymous_variant 0.35
rpoC 765041 c.1672T>C synonymous_variant 0.35
rpoC 765047 c.1678T>C synonymous_variant 0.34
rpoC 765052 c.1683C>G synonymous_variant 0.34
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.33
rpoC 765076 c.1707A>G synonymous_variant 0.37
rpoC 765079 c.1710T>G synonymous_variant 0.36
rpoC 765082 c.1713G>C synonymous_variant 0.35
rpoC 765089 c.1720T>C synonymous_variant 0.35
rpoC 765122 c.1753C>T synonymous_variant 0.29
rpoC 765145 c.1776C>G synonymous_variant 0.18
rpoC 765361 c.1992C>G synonymous_variant 0.18
rpoC 765391 c.2022C>T synonymous_variant 0.38
rpoC 765394 c.2025G>A synonymous_variant 0.39
rpoC 765404 p.Leu679Met missense_variant 0.37
rpoC 765412 c.2043T>C synonymous_variant 0.33
rpoC 765415 c.2046G>C synonymous_variant 0.33
rpoC 765452 p.Ala695Thr missense_variant 0.43
rpoC 765478 c.2109T>C synonymous_variant 0.51
rpoC 765544 c.2175C>G synonymous_variant 0.53
rpoC 765547 c.2178C>A synonymous_variant 0.54
rpoC 765548 c.2179_2180delAGinsTC synonymous_variant 0.56
rpoC 765553 c.2184C>T synonymous_variant 0.57
rpoC 765590 p.Arg741Asn missense_variant 0.65
rpoC 765596 p.Lys743Gln missense_variant 0.65
rpoC 765611 p.His748Ala missense_variant 0.61
rpoC 765625 c.2256C>G synonymous_variant 0.58
rpoC 765628 c.2259G>C synonymous_variant 0.58
rpoC 765655 c.2286T>A synonymous_variant 0.57
rpoC 765700 c.2331T>C synonymous_variant 0.58
rpoC 765724 c.2355C>G synonymous_variant 0.56
rpoC 765734 c.2365T>C synonymous_variant 0.52
rpoC 765739 c.2370G>C synonymous_variant 0.52
rpoC 765751 c.2382C>G synonymous_variant 0.51
rpoC 765772 c.2403C>G synonymous_variant 0.52
rpoC 765781 p.Asp804Glu missense_variant 0.53
rpoC 765787 c.2418C>T synonymous_variant 0.52
rpoC 765796 c.2427C>T synonymous_variant 0.52
rpoC 765811 c.2442T>C synonymous_variant 0.5
rpoC 765814 c.2445A>C synonymous_variant 0.48
rpoC 765823 c.2454C>G synonymous_variant 0.48
rpoC 765826 c.2457T>G synonymous_variant 0.46
rpoC 765835 c.2466C>A synonymous_variant 0.45
rpoC 765836 c.2467C>T synonymous_variant 0.45
rpoC 765865 c.2496C>T synonymous_variant 0.41
rpoC 765871 c.2502T>C synonymous_variant 0.4
rpoC 765875 p.Val836Ile missense_variant 0.39
rpoC 765883 c.2514C>G synonymous_variant 0.36
rpoC 765886 c.2517C>G synonymous_variant 0.35
rpoC 765908 c.2539C>T synonymous_variant 0.3
rpoC 765937 c.2568T>G synonymous_variant 0.2
rpoC 765940 c.2571A>G synonymous_variant 0.2
rpoC 765943 c.2574G>A synonymous_variant 0.2
rpoC 765952 c.2583G>C synonymous_variant 0.19
rpoC 766189 c.2820T>C synonymous_variant 0.22
rpoC 766194 p.Gln942Arg missense_variant 0.23
rpoC 766207 c.2838T>C synonymous_variant 0.22
rpoC 766381 c.3012C>T synonymous_variant 0.19
rpoC 766384 c.3015A>G synonymous_variant 0.19
rpoC 766387 c.3018C>G synonymous_variant 0.2
rpoC 766393 c.3024C>G synonymous_variant 0.29
rpoC 766402 c.3033C>T synonymous_variant 0.3
rpoC 766411 c.3042C>G synonymous_variant 0.36
rpoC 766426 c.3057C>T synonymous_variant 0.4
rpoC 766442 p.Thr1025Val missense_variant 0.39
rpoC 766445 p.Gly1026Ser missense_variant 0.38
rpoC 766456 c.3087C>G synonymous_variant 0.45
rpoC 766484 p.Val1039Ile missense_variant 0.47
rpoC 766492 c.3123T>C synonymous_variant 0.51
rpoC 766518 p.Thr1050Ser missense_variant 0.53
rpoC 766522 c.3153C>A synonymous_variant 0.55
rpoC 766528 c.3159T>G synonymous_variant 0.52
rpoC 766534 c.3165C>G synonymous_variant 0.54
rpoC 766540 p.Asp1057Glu missense_variant 0.52
rpoC 766546 p.Glu1059Asp missense_variant 0.54
rpoC 766549 c.3180G>C synonymous_variant 0.55
rpoC 766570 c.3201T>C synonymous_variant 0.63
rpoC 766573 c.3204T>C synonymous_variant 0.63
rpoC 766585 c.3216T>C synonymous_variant 0.56
rpoC 766597 c.3228C>G synonymous_variant 0.63
rpoC 766607 p.Ile1080Leu missense_variant 0.63
rpoC 766618 c.3249G>C synonymous_variant 0.67
rpoC 766633 c.3264G>C synonymous_variant 0.69
rpoC 766645 p.Glu1092Asp missense_variant 0.34
rpoC 766651 c.3282T>C synonymous_variant 0.56
rpoC 766652 p.Ser1095Thr missense_variant 0.56
rpoC 766667 p.Ser1100Ala missense_variant 0.56
rpoC 766672 c.3303T>C synonymous_variant 0.57
rpoC 766684 c.3315C>G synonymous_variant 0.52
rpoC 766726 c.3357T>C synonymous_variant 0.43
rpoC 766750 c.3381C>G synonymous_variant 0.42
rpoC 766765 c.3396A>C synonymous_variant 0.35
rpoC 766774 c.3405T>C synonymous_variant 0.28
rpoC 766775 p.Arg1136Lys missense_variant 0.28
rpoC 766787 p.Glu1140Gln missense_variant 0.33
rpoC 766798 c.3429C>G synonymous_variant 0.34
rpoC 766801 c.3432C>G synonymous_variant 0.35
rpoC 766804 c.3435A>G synonymous_variant 0.35
rpoC 766807 c.3438T>C synonymous_variant 0.35
rpoC 766834 c.3465G>A synonymous_variant 0.42
rpoC 766843 c.3474T>G synonymous_variant 0.44
rpoC 766867 c.3498C>G synonymous_variant 0.46
rpoC 766894 c.3525T>C synonymous_variant 0.52
rpoC 766895 c.3526T>C synonymous_variant 0.51
rpoC 766900 c.3531T>C synonymous_variant 0.51
rpoC 766903 c.3534C>T synonymous_variant 0.5
rpoC 766918 c.3549C>G synonymous_variant 0.53
rpoC 766921 c.3552G>C synonymous_variant 0.5
rpoC 766933 c.3564A>C synonymous_variant 0.5
rpoC 766942 c.3573C>A synonymous_variant 0.5
rpoC 766945 c.3576A>G synonymous_variant 0.51
rpoC 766963 c.3594T>C synonymous_variant 0.5
rpoC 766972 c.3603G>C synonymous_variant 0.51
rpoC 766988 c.3619C>T synonymous_variant 0.47
rpoC 766996 c.3627C>G synonymous_variant 0.5
rpoC 767002 c.3633G>C synonymous_variant 0.47
rpoC 767059 c.3690T>G synonymous_variant 0.59
rpoC 767062 c.3693C>A synonymous_variant 0.59
rpoC 767066 c.3697C>T synonymous_variant 0.62
rpoC 767098 c.3729T>C synonymous_variant 0.61
rpoC 767119 c.3750A>G synonymous_variant 0.54
rpoC 767158 c.3789T>A synonymous_variant 0.57
rpoC 767162 p.Asn1265Ala missense_variant 0.54
rpoC 767180 p.Ala1271Gln missense_variant 0.54
rpoC 767191 c.3822C>G synonymous_variant 0.49
rpoC 767206 c.3837C>G synonymous_variant 0.45
rpoC 767209 c.3840T>C synonymous_variant 0.45
rpoC 767221 c.3852C>G synonymous_variant 0.36
rpoC 767233 c.3864T>C synonymous_variant 0.37
rpoC 767239 c.3870T>C synonymous_variant 0.39
rpoC 767263 c.3894T>C synonymous_variant 0.3
rpoC 767264 p.Ala1299Gln missense_variant 0.3
rpoC 767278 c.3909T>C synonymous_variant 0.28
rpoC 767281 c.3912C>G synonymous_variant 0.28
rpoC 767302 c.3933C>T synonymous_variant 0.23
rpoC 767306 p.Ser1313Gly missense_variant 0.2
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776009 c.2472A>G synonymous_variant 0.23
mmpL5 776024 c.2457G>C synonymous_variant 0.22
mmpL5 776030 c.2451G>A synonymous_variant 0.21
mmpL5 776038 p.Ser815Ala missense_variant 0.22
mmpL5 776040 p.Ala814Ser missense_variant 0.21
mmpL5 776056 p.Val809Leu missense_variant 0.23
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpS5 778588 p.Gln106His missense_variant 0.44
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781608 p.Ser17Gly missense_variant 0.17
rpsL 781622 c.63C>T synonymous_variant 0.29
rpsL 781628 c.69T>C synonymous_variant 0.28
rpsL 781634 c.75G>A synonymous_variant 0.32
rpsL 781649 c.90T>C synonymous_variant 0.33
rpsL 781652 c.93T>C synonymous_variant 0.3
rpsL 781655 c.96T>C synonymous_variant 0.29
rpsL 781658 c.99A>G synonymous_variant 0.29
rpsL 781682 c.123T>C synonymous_variant 0.34
rpsL 781703 c.144G>A synonymous_variant 0.39
rpsL 781715 c.156T>G synonymous_variant 0.42
rpsL 781718 c.159C>G synonymous_variant 0.43
rpsL 781724 c.165G>C synonymous_variant 0.42
rpsL 781728 c.169T>C synonymous_variant 0.41
rpsL 781733 c.174G>C synonymous_variant 0.41
rpsL 781736 c.177T>C synonymous_variant 0.42
rpsL 781742 c.183C>T synonymous_variant 0.42
rpsL 781751 c.192G>C synonymous_variant 0.42
rpsL 781754 c.195G>C synonymous_variant 0.43
rpsL 781778 c.219C>T synonymous_variant 0.4
rpsL 781779 c.220C>T synonymous_variant 0.42
rpsL 781799 c.240G>C synonymous_variant 0.41
rpsL 781820 c.261G>C synonymous_variant 0.49
rpsL 781826 c.267C>T synonymous_variant 0.46
rpsL 781832 c.273T>C synonymous_variant 0.47
rpsL 781841 c.282C>G synonymous_variant 0.5
rpsL 781856 c.297C>G synonymous_variant 0.44
rpsL 781859 c.300T>C synonymous_variant 0.42
rpsL 781865 c.306G>C synonymous_variant 0.42
rpsL 781868 c.309T>C synonymous_variant 0.42
rpsL 781871 c.312G>C synonymous_variant 0.43
rpsL 781877 c.318T>G synonymous_variant 0.46
rpsL 781892 c.333A>G synonymous_variant 0.47
rpsL 781898 c.339A>T synonymous_variant 0.48
rpsL 781907 c.348T>C synonymous_variant 0.47
rpsL 781916 c.357T>C synonymous_variant 0.48
rplC 800612 c.-197A>G upstream_gene_variant 0.31
rplC 800618 c.-191T>C upstream_gene_variant 0.32
rplC 800630 c.-179G>C upstream_gene_variant 0.26
rplC 800633 c.-176T>C upstream_gene_variant 0.26
rplC 800648 c.-161A>G upstream_gene_variant 0.29
rplC 800654 c.-155T>C upstream_gene_variant 0.28
rplC 800657 c.-152G>A upstream_gene_variant 0.28
rplC 800693 c.-116A>C upstream_gene_variant 0.28
rplC 800703 c.-106T>C upstream_gene_variant 0.27
rplC 800715 c.-94A>C upstream_gene_variant 0.24
rplC 800723 c.-86C>G upstream_gene_variant 0.23
rplC 800726 c.-83G>A upstream_gene_variant 0.23
rplC 801171 c.363A>G synonymous_variant 0.2
rplC 801174 c.366T>C synonymous_variant 0.24
rplC 801195 c.387G>C synonymous_variant 0.28
rplC 801201 c.393C>T synonymous_variant 0.27
rplC 801210 c.402T>G synonymous_variant 0.24
rplC 801216 c.408C>T synonymous_variant 0.23
rplC 801222 c.414T>C synonymous_variant 0.23
rplC 801228 c.420T>C synonymous_variant 0.23
rplC 801231 c.423C>T synonymous_variant 0.23
rplC 801234 c.426G>A synonymous_variant 0.22
rplC 801237 c.429G>C synonymous_variant 0.23
rplC 801246 c.438C>A synonymous_variant 0.21
rplC 801249 c.441T>C synonymous_variant 0.22
rplC 801252 c.444G>C synonymous_variant 0.22
rplC 801255 c.447C>T synonymous_variant 0.23
rplC 801258 c.450C>G synonymous_variant 0.23
rplC 801264 c.456C>G synonymous_variant 0.21
rplC 801267 c.459A>C synonymous_variant 0.21
rplC 801270 c.462T>C synonymous_variant 0.22
rplC 801276 c.468G>A synonymous_variant 0.24
rplC 801282 c.474G>C synonymous_variant 0.25
rplC 801321 c.513C>T synonymous_variant 0.19
fbiC 1303464 c.534A>G synonymous_variant 0.29
fbiC 1303470 c.540T>C synonymous_variant 0.28
fbiC 1303476 c.546G>C synonymous_variant 0.29
fbiC 1303480 p.Gln184Glu missense_variant 0.3
fbiC 1303488 c.558G>C synonymous_variant 0.34
fbiC 1303509 c.579G>C synonymous_variant 0.37
fbiC 1303512 c.582T>G synonymous_variant 0.37
fbiC 1303557 c.627G>T synonymous_variant 0.41
fbiC 1303581 c.651G>C synonymous_variant 0.39
fbiC 1303584 c.654C>G synonymous_variant 0.39
fbiC 1303590 c.660A>G synonymous_variant 0.37
fbiC 1303602 c.672A>G synonymous_variant 0.32
fbiC 1303608 c.678G>A synonymous_variant 0.29
fbiC 1303611 c.681G>T synonymous_variant 0.23
fbiC 1303614 c.684C>G synonymous_variant 0.23
fbiC 1303615 p.Ala229Pro missense_variant 0.23
fbiC 1303632 c.702T>C synonymous_variant 0.21
fbiC 1303803 c.873C>A synonymous_variant 0.23
fbiC 1303818 c.888C>G synonymous_variant 0.25
fbiC 1303827 c.897A>G synonymous_variant 0.25
fbiC 1303843 p.Ala305Ser missense_variant 0.3
fbiC 1303846 p.Phe306Thr missense_variant 0.3
fbiC 1303857 c.927C>G synonymous_variant 0.28
fbiC 1303860 c.930A>C synonymous_variant 0.28
fbiC 1303861 p.Ile311Phe missense_variant 0.28
fbiC 1303866 p.Glu312Asp missense_variant 0.29
fbiC 1303869 c.939T>C synonymous_variant 0.29
fbiC 1303871 p.Tyr314Leu missense_variant 0.29
fbiC 1303884 c.954T>G synonymous_variant 0.32
fbiC 1303890 c.960G>C synonymous_variant 0.33
fbiC 1303905 c.975G>C synonymous_variant 0.3
fbiC 1303914 c.984C>A synonymous_variant 0.34
fbiC 1303929 c.999G>T synonymous_variant 0.33
fbiC 1303947 c.1017T>G synonymous_variant 0.26
fbiC 1303948 p.Gly340Arg missense_variant 0.25
fbiC 1303951 p.Asp341Gln missense_variant 0.27
fbiC 1303961 p.Arg344Leu missense_variant 0.27
fbiC 1303966 c.1036C>T synonymous_variant 0.26
fbiC 1303969 p.Val347Ile missense_variant 0.26
fbiC 1303974 c.1044C>G synonymous_variant 0.31
fbiC 1303980 c.1050G>T synonymous_variant 0.33
fbiC 1304008 c.1078T>C synonymous_variant 0.38
fbiC 1304013 c.1083G>C synonymous_variant 0.42
fbiC 1304020 p.His364Tyr missense_variant 0.42
fbiC 1304040 c.1110C>G synonymous_variant 0.39
fbiC 1304055 c.1125C>T synonymous_variant 0.39
fbiC 1304058 c.1128G>A synonymous_variant 0.38
fbiC 1304064 c.1134G>C synonymous_variant 0.36
fbiC 1304067 c.1137G>C synonymous_variant 0.35
fbiC 1304070 c.1140C>G synonymous_variant 0.33
fbiC 1304085 c.1155C>A synonymous_variant 0.35
fbiC 1304092 p.Met388Leu missense_variant 0.35
fbiC 1304099 p.Gln390Pro missense_variant 0.37
fbiC 1304104 c.1174C>T synonymous_variant 0.39
fbiC 1304111 p.Ala394Val missense_variant 0.42
fbiC 1304115 c.1185A>G synonymous_variant 0.41
fbiC 1304127 c.1197A>G synonymous_variant 0.38
fbiC 1304130 c.1200G>A synonymous_variant 0.36
fbiC 1304133 c.1203G>C synonymous_variant 0.39
fbiC 1304142 c.1212G>A synonymous_variant 0.5
fbiC 1304157 c.1227G>A synonymous_variant 0.47
fbiC 1304163 c.1233G>T synonymous_variant 0.41
fbiC 1304166 c.1236A>G synonymous_variant 0.35
fbiC 1304172 c.1242G>C synonymous_variant 0.32
fbiC 1304173 p.Val415Thr missense_variant 0.32
fbiC 1304184 c.1254G>C synonymous_variant 0.33
fbiC 1304192 p.Ala421Val missense_variant 0.3
fbiC 1304205 c.1275C>G synonymous_variant 0.32
fbiC 1304214 c.1284C>G synonymous_variant 0.25
fbiC 1304217 p.Asn429Lys missense_variant 0.23
fbiC 1304226 c.1296C>A synonymous_variant 0.24
fbiC 1304230 p.Pro434Val missense_variant 0.23
fbiC 1304481 c.1551T>G synonymous_variant 0.25
fbiC 1304496 c.1566T>C synonymous_variant 0.24
fbiC 1304511 c.1581C>G synonymous_variant 0.32
fbiC 1304517 c.1587C>A synonymous_variant 0.33
fbiC 1304520 c.1590A>G synonymous_variant 0.33
fbiC 1304526 c.1596T>A synonymous_variant 0.33
fbiC 1304532 c.1602G>A synonymous_variant 0.33
fbiC 1304533 c.1603T>C synonymous_variant 0.33
fbiC 1304538 c.1608C>T synonymous_variant 0.31
fbiC 1304545 p.Val539Thr missense_variant 0.34
fbiC 1304559 p.Glu543Asp missense_variant 0.38
fbiC 1304568 c.1638T>C synonymous_variant 0.4
fbiC 1304571 c.1641G>C synonymous_variant 0.38
fbiC 1304574 c.1644C>G synonymous_variant 0.4
fbiC 1304580 c.1650T>C synonymous_variant 0.42
fbiC 1304613 c.1683T>G synonymous_variant 0.49
fbiC 1304634 c.1704C>G synonymous_variant 0.5
fbiC 1304640 c.1710A>C synonymous_variant 0.48
fbiC 1304646 c.1716T>C synonymous_variant 0.47
fbiC 1304650 p.Ala574Pro missense_variant 0.46
fbiC 1304655 c.1725C>T synonymous_variant 0.47
fbiC 1304661 c.1731C>T synonymous_variant 0.44
fbiC 1304665 c.1735C>T synonymous_variant 0.44
fbiC 1304673 c.1743C>G synonymous_variant 0.4
fbiC 1304675 p.Gly582Ala missense_variant 0.4
fbiC 1304682 c.1752C>G synonymous_variant 0.4
fbiC 1304688 p.Asp586Glu missense_variant 0.41
fbiC 1304698 p.Glu590Gln missense_variant 0.38
fbiC 1304711 p.Ala594Glu missense_variant 0.36
fbiC 1304715 c.1785G>C synonymous_variant 0.36
fbiC 1304724 c.1794A>G synonymous_variant 0.35
fbiC 1304742 c.1812T>C synonymous_variant 0.22
fbiC 1304949 c.2019C>T synonymous_variant 0.19
fbiC 1304958 c.2028T>G synonymous_variant 0.25
fbiC 1304970 c.2040G>C synonymous_variant 0.31
fbiC 1304983 c.2053C>T synonymous_variant 0.23
fbiC 1304988 c.2058G>C synonymous_variant 0.24
fbiC 1304991 c.2061G>A synonymous_variant 0.23
fbiC 1304994 c.2064A>G synonymous_variant 0.21
fbiC 1304995 p.Leu689Met missense_variant 0.21
fbiC 1305001 p.Ile691Val missense_variant 0.25
fbiC 1305006 c.2076A>G synonymous_variant 0.25
fbiC 1305012 c.2082G>C synonymous_variant 0.3
fbiC 1305015 c.2085G>C synonymous_variant 0.34
fbiC 1305021 c.2091C>G synonymous_variant 0.34
fbiC 1305024 c.2094C>T synonymous_variant 0.33
fbiC 1305030 c.2100G>C synonymous_variant 0.37
fbiC 1305043 c.2113_2115delTCAinsAGC synonymous_variant 0.37
fbiC 1305066 c.2136T>C synonymous_variant 0.41
fbiC 1305069 c.2139G>C synonymous_variant 0.4
fbiC 1305075 c.2145T>C synonymous_variant 0.37
fbiC 1305078 c.2148A>G synonymous_variant 0.36
fbiC 1305081 c.2151G>A synonymous_variant 0.35
fbiC 1305090 c.2160C>G synonymous_variant 0.42
fbiC 1305096 c.2166T>C synonymous_variant 0.37
fbiC 1305099 c.2169T>C synonymous_variant 0.37
fbiC 1305114 c.2184T>C synonymous_variant 0.4
fbiC 1305117 c.2187T>C synonymous_variant 0.35
fbiC 1305126 c.2196T>A synonymous_variant 0.37
fbiC 1305135 c.2205C>T synonymous_variant 0.41
fbiC 1305150 c.2220C>G synonymous_variant 0.34
fbiC 1305162 c.2232C>T synonymous_variant 0.31
fbiC 1305174 c.2244T>C synonymous_variant 0.3
fbiC 1305177 c.2247A>G synonymous_variant 0.3
fbiC 1305181 c.2251T>C synonymous_variant 0.29
fbiC 1305186 c.2256C>T synonymous_variant 0.29
fbiC 1305195 c.2265T>C synonymous_variant 0.31
fbiC 1305204 c.2274C>G synonymous_variant 0.29
fbiC 1305210 c.2280G>C synonymous_variant 0.3
fbiC 1305234 c.2304G>C synonymous_variant 0.31
fbiC 1305237 c.2307A>G synonymous_variant 0.28
fbiC 1305243 c.2313T>G synonymous_variant 0.3
fbiC 1305270 c.2340C>G synonymous_variant 0.34
fbiC 1305276 c.2346G>T synonymous_variant 0.33
fbiC 1305282 c.2352T>C synonymous_variant 0.31
fbiC 1305297 c.2367G>C synonymous_variant 0.28
fbiC 1305300 c.2370A>G synonymous_variant 0.27
fbiC 1305303 c.2373T>C synonymous_variant 0.28
fbiC 1305306 c.2376A>G synonymous_variant 0.28
fbiC 1305311 p.Arg794Gln missense_variant 0.28
fbiC 1305313 p.Arg795Gly missense_variant 0.27
fbiC 1305324 c.2394G>C synonymous_variant 0.28
fbiC 1305331 p.Glu801Asn missense_variant 0.3
fbiC 1305336 c.2406T>C synonymous_variant 0.28
fbiC 1305393 c.2463T>C synonymous_variant 0.25
fbiC 1305405 c.2475A>G synonymous_variant 0.23
fbiC 1305408 c.2478G>C synonymous_variant 0.21
fbiC 1305420 c.2490C>G synonymous_variant 0.2
fbiC 1305421 p.Ala831Pro missense_variant 0.2
fbiC 1305427 c.2497C>T synonymous_variant 0.21
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.33
rrs 1471929 n.84C>T non_coding_transcript_exon_variant 0.29
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.29
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.29
rrs 1471936 n.91A>G non_coding_transcript_exon_variant 0.29
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 0.28
rrl 1473768 n.111A>G non_coding_transcript_exon_variant 0.2
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.2
rrl 1473782 n.125A>T non_coding_transcript_exon_variant 0.2
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.25
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.23
rrl 1473807 n.150T>C non_coding_transcript_exon_variant 0.23
rrl 1475811 n.2154A>G non_coding_transcript_exon_variant 0.2
rrl 1475883 n.2226A>C non_coding_transcript_exon_variant 0.22
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.25
rrl 1475989 n.2332T>A non_coding_transcript_exon_variant 0.25
rrl 1475992 n.2335T>C non_coding_transcript_exon_variant 0.25
rrl 1475997 n.2340A>G non_coding_transcript_exon_variant 0.25
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 0.25
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.22
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.2
rrl 1476165 n.2508T>G non_coding_transcript_exon_variant 0.2
rrl 1476523 n.2866T>C non_coding_transcript_exon_variant 0.5
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.44
rrl 1476531 n.2874T>C non_coding_transcript_exon_variant 0.44
inhA 1673916 c.-286A>T upstream_gene_variant 0.23
inhA 1673917 c.-285G>T upstream_gene_variant 0.23
inhA 1673922 c.-280T>C upstream_gene_variant 0.26
inhA 1673925 c.-277C>G upstream_gene_variant 0.29
inhA 1673946 c.-256C>G upstream_gene_variant 0.35
inhA 1673961 c.-241A>C upstream_gene_variant 0.5
inhA 1673973 c.-229G>C upstream_gene_variant 0.5
inhA 1674033 c.-169T>C upstream_gene_variant 0.36
inhA 1674036 c.-166G>A upstream_gene_variant 0.38
fabG1 1674037 p.Gln200Lys missense_variant 0.38
inhA 1674042 c.-160G>C upstream_gene_variant 0.39
inhA 1674045 c.-157G>A upstream_gene_variant 0.36
fabG1 1674049 p.Gln204Glu missense_variant 0.36
inhA 1674054 c.-148T>C upstream_gene_variant 0.36
inhA 1674060 c.-142A>G upstream_gene_variant 0.38
fabG1 1674070 p.Val211Ile missense_variant 0.35
fabG1 1674079 p.Pro214Ala missense_variant 0.32
inhA 1674096 c.-106G>T upstream_gene_variant 0.24
inhA 1674099 c.-103G>C upstream_gene_variant 0.24
inhA 1674256 p.Ser19Ala missense_variant 0.2
inhA 1674279 c.78A>C synonymous_variant 0.2
inhA 1674303 c.102C>A synonymous_variant 0.22
inhA 1674312 c.111G>C synonymous_variant 0.22
inhA 1674313 p.Leu38Cys missense_variant 0.22
inhA 1674321 c.120G>T synonymous_variant 0.22
inhA 1674342 c.141T>C synonymous_variant 0.22
inhA 1674343 p.Gln48Glu missense_variant 0.22
inhA 1674353 p.Thr51Ile missense_variant 0.18
inhA 1674756 c.555T>A synonymous_variant 0.18
inhA 1674762 c.561T>C synonymous_variant 0.19
inhA 1674765 c.564C>T synonymous_variant 0.19
inhA 1674774 c.573A>C synonymous_variant 0.2
inhA 1674789 c.588G>A synonymous_variant 0.32
inhA 1674790 c.589C>T synonymous_variant 0.32
inhA 1674801 c.600T>C synonymous_variant 0.26
inhA 1674813 c.612C>T synonymous_variant 0.24
inhA 1674934 p.Leu245Val missense_variant 0.26
inhA 1674949 c.748C>T synonymous_variant 0.21
inhA 1674957 c.756G>C synonymous_variant 0.21
inhA 1674963 c.762G>C synonymous_variant 0.24
inhA 1674966 c.765T>G synonymous_variant 0.24
inhA 1674990 c.789C>T synonymous_variant 0.26
inhA 1674993 c.792G>C synonymous_variant 0.25
inhA 1674996 c.795C>T synonymous_variant 0.24
inhA 1675002 c.801A>G synonymous_variant 0.24
rpsA 1833554 p.Thr5Ala missense_variant 0.3
rpsA 1833559 c.18C>T synonymous_variant 0.31
rpsA 1833560 p.Thr7Ser missense_variant 0.29
rpsA 1833568 c.27G>C synonymous_variant 0.35
rpsA 1833589 c.48A>C synonymous_variant 0.32
rpsA 1833595 c.54T>G synonymous_variant 0.31
rpsA 1833616 c.75A>C synonymous_variant 0.32
rpsA 1833619 c.78A>C synonymous_variant 0.31
rpsA 1833625 c.84A>G synonymous_variant 0.31
rpsA 1833628 c.87G>C synonymous_variant 0.3
rpsA 1833658 c.117C>G synonymous_variant 0.23
rpsA 1833661 c.120A>G synonymous_variant 0.23
rpsA 1833664 c.123C>G synonymous_variant 0.24
rpsA 1833676 c.135A>G synonymous_variant 0.22
rpsA 1833679 c.138G>T synonymous_variant 0.24
rpsA 1833688 c.147C>T synonymous_variant 0.26
rpsA 1833697 c.156C>G synonymous_variant 0.23
rpsA 1833802 c.261A>G synonymous_variant 0.2
rpsA 1833811 c.270G>T synonymous_variant 0.23
rpsA 1833829 c.288A>G synonymous_variant 0.27
rpsA 1833832 p.Glu97Asp missense_variant 0.26
rpsA 1833838 c.297G>C synonymous_variant 0.26
rpsA 1833841 c.300C>G synonymous_variant 0.26
rpsA 1833847 c.306C>G synonymous_variant 0.28
rpsA 1833850 c.309C>G synonymous_variant 0.28
rpsA 1833871 c.330G>A synonymous_variant 0.27
rpsA 1833874 c.333T>G synonymous_variant 0.29
rpsA 1833892 c.351G>A synonymous_variant 0.33
rpsA 1833901 c.360G>A synonymous_variant 0.34
rpsA 1833904 c.363G>A synonymous_variant 0.36
rpsA 1833916 c.375C>G synonymous_variant 0.38
rpsA 1833922 c.381G>A synonymous_variant 0.44
rpsA 1833928 c.387G>C synonymous_variant 0.44
rpsA 1833937 c.396G>A synonymous_variant 0.48
rpsA 1833949 c.408T>A synonymous_variant 0.48
rpsA 1833952 c.411C>G synonymous_variant 0.49
rpsA 1833979 c.438T>C synonymous_variant 0.56
rpsA 1833988 c.447C>G synonymous_variant 0.55
rpsA 1834000 c.459G>C synonymous_variant 0.55
rpsA 1834009 c.468C>G synonymous_variant 0.53
rpsA 1834015 c.474G>C synonymous_variant 0.42
rpsA 1834018 c.477C>T synonymous_variant 0.36
rpsA 1834021 c.480C>T synonymous_variant 0.37
rpsA 1834046 p.Ile169Leu missense_variant 0.29
rpsA 1834096 c.555G>C synonymous_variant 0.3
rpsA 1834102 c.561T>C synonymous_variant 0.31
rpsA 1834150 c.609G>C synonymous_variant 0.33
rpsA 1834153 c.612T>C synonymous_variant 0.32
rpsA 1834154 p.Asn205Gln missense_variant 0.33
rpsA 1834157 c.616T>C synonymous_variant 0.33
rpsA 1834165 c.624A>G synonymous_variant 0.33
rpsA 1834169 p.Thr210Ala missense_variant 0.33
rpsA 1834174 c.633C>T synonymous_variant 0.31
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834183 c.642T>C synonymous_variant 0.32
rpsA 1834186 c.645C>G synonymous_variant 0.32
rpsA 1834222 c.681T>C synonymous_variant 0.42
rpsA 1834234 c.693G>C synonymous_variant 0.4
rpsA 1834237 c.696C>T synonymous_variant 0.43
rpsA 1834240 c.699T>C synonymous_variant 0.46
rpsA 1834249 c.708T>C synonymous_variant 0.44
rpsA 1834252 c.711C>G synonymous_variant 0.44
rpsA 1834258 c.717G>A synonymous_variant 0.46
rpsA 1834261 c.720A>G synonymous_variant 0.45
rpsA 1834285 c.744G>A synonymous_variant 0.44
rpsA 1834297 c.756C>G synonymous_variant 0.46
rpsA 1834303 c.762T>C synonymous_variant 0.48
rpsA 1834306 c.765T>C synonymous_variant 0.48
rpsA 1834348 c.807T>C synonymous_variant 0.51
rpsA 1834351 c.810G>A synonymous_variant 0.52
rpsA 1834366 c.825A>G synonymous_variant 0.5
rpsA 1834381 c.840G>A synonymous_variant 0.5
rpsA 1834411 c.870T>G synonymous_variant 0.48
rpsA 1834414 c.873C>T synonymous_variant 0.45
rpsA 1834423 c.882G>C synonymous_variant 0.46
rpsA 1834451 c.910T>C synonymous_variant 0.47
rpsA 1834456 c.915T>G synonymous_variant 0.46
rpsA 1834465 c.924T>C synonymous_variant 0.43
rpsA 1834468 c.927A>G synonymous_variant 0.41
rpsA 1834489 c.948T>C synonymous_variant 0.43
rpsA 1834495 c.954G>A synonymous_variant 0.39
rpsA 1834519 c.978G>C synonymous_variant 0.48
rpsA 1834520 p.Ala327Ser missense_variant 0.48
rpsA 1834528 c.987T>G synonymous_variant 0.47
rpsA 1834532 p.Val331Ile missense_variant 0.47
rpsA 1834540 c.999G>C synonymous_variant 0.45
rpsA 1834541 p.Pro334Ala missense_variant 0.45
rpsA 1834555 c.1014T>C synonymous_variant 0.48
rpsA 1834557 p.Ala339Gly missense_variant 0.5
rpsA 1834561 c.1020C>G synonymous_variant 0.49
rpsA 1834570 p.Asp343Glu missense_variant 0.52
rpsA 1834572 p.Ala344Val missense_variant 0.51
rpsA 1834603 c.1062G>A synonymous_variant 0.54
rpsA 1834609 c.1068T>C synonymous_variant 0.55
rpsA 1834612 c.1071G>C synonymous_variant 0.55
rpsA 1834619 c.1078T>C synonymous_variant 0.57
rpsA 1834633 c.1092A>G synonymous_variant 0.55
rpsA 1834639 c.1098T>C synonymous_variant 0.52
rpsA 1834654 c.1113G>A synonymous_variant 0.51
rpsA 1834666 c.1125G>C synonymous_variant 0.49
rpsA 1834669 c.1128G>C synonymous_variant 0.48
rpsA 1834690 c.1149T>C synonymous_variant 0.56
rpsA 1834702 p.Gln387His missense_variant 0.57
rpsA 1834720 c.1179C>G synonymous_variant 0.58
rpsA 1834732 c.1191T>C synonymous_variant 0.52
rpsA 1834733 p.Ala398Pro missense_variant 0.52
rpsA 1834753 c.1212T>C synonymous_variant 0.5
rpsA 1834759 c.1218A>C synonymous_variant 0.48
rpsA 1834761 p.Phe407Tyr missense_variant 0.47
rpsA 1834789 c.1248T>C synonymous_variant 0.47
rpsA 1834792 c.1251G>C synonymous_variant 0.47
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2102821 c.222C>G synonymous_variant 0.18
ndh 2102827 c.216C>G synonymous_variant 0.21
ndh 2102836 c.207T>C synonymous_variant 0.31
ndh 2102842 c.201A>G synonymous_variant 0.34
ndh 2102848 c.195G>A synonymous_variant 0.35
ndh 2102857 c.186T>C synonymous_variant 0.39
ndh 2102863 c.180C>G synonymous_variant 0.41
ndh 2102866 c.177C>G synonymous_variant 0.42
ndh 2102869 c.174G>T synonymous_variant 0.42
ndh 2102872 c.171A>G synonymous_variant 0.42
ndh 2102875 c.168C>T synonymous_variant 0.4
ndh 2102890 c.153C>T synonymous_variant 0.44
ndh 2102911 c.132G>C synonymous_variant 0.43
ndh 2102929 c.114T>C synonymous_variant 0.4
ndh 2102940 c.103C>A synonymous_variant 0.4
ndh 2102953 c.90A>C synonymous_variant 0.4
ndh 2102962 c.81A>C synonymous_variant 0.32
ndh 2102965 c.78G>A synonymous_variant 0.32
ndh 2102974 c.69G>A synonymous_variant 0.31
ndh 2102977 c.66T>C synonymous_variant 0.28
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155673 c.439C>T synonymous_variant 0.2
katG 2155689 c.421_423delTTGinsCTC synonymous_variant 0.22
katG 2155713 c.399C>T synonymous_variant 0.21
katG 2155716 c.396T>C synonymous_variant 0.2
katG 2155719 c.393G>C synonymous_variant 0.2
katG 2155722 c.390G>T synonymous_variant 0.2
katG 2155728 c.384G>C synonymous_variant 0.21
katG 2155734 p.Met126Ala missense_variant 0.21
katG 2155740 p.Gly124Glu missense_variant 0.23
katG 2155743 c.369G>C synonymous_variant 0.26
katG 2155747 p.Ala122Gly missense_variant 0.25
katG 2155755 c.357C>T synonymous_variant 0.28
katG 2155785 c.327T>C synonymous_variant 0.4
katG 2155788 c.324C>T synonymous_variant 0.4
katG 2155794 p.Ala106Ser missense_variant 0.4
katG 2155806 c.306T>C synonymous_variant 0.32
katG 2155845 c.267G>C synonymous_variant 0.2
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2170066 p.Ala183Thr missense_variant 0.15
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517938 c.-177C>G upstream_gene_variant 0.49
kasA 2517941 c.-174C>G upstream_gene_variant 0.47
kasA 2517968 c.-147T>G upstream_gene_variant 0.39
kasA 2517974 c.-141T>C upstream_gene_variant 0.37
kasA 2517983 c.-132T>C upstream_gene_variant 0.34
kasA 2517989 c.-126T>C upstream_gene_variant 0.32
kasA 2517994 c.-121_-120delCCinsAA upstream_gene_variant 0.32
kasA 2518025 c.-90G>C upstream_gene_variant 0.31
kasA 2518162 c.48G>C synonymous_variant 0.25
kasA 2518180 c.66G>A synonymous_variant 0.31
kasA 2518190 p.Ser26Ala missense_variant 0.31
kasA 2518193 p.Pro27Ala missense_variant 0.31
kasA 2518204 c.90G>A synonymous_variant 0.36
kasA 2518220 c.106_108delCTGinsTTA synonymous_variant 0.34
kasA 2518223 c.109T>C synonymous_variant 0.35
kasA 2518234 c.120G>A synonymous_variant 0.34
kasA 2518248 p.Ala45Val missense_variant 0.33
kasA 2518270 c.156C>G synonymous_variant 0.33
kasA 2518282 c.168A>G synonymous_variant 0.29
kasA 2518283 p.Ala57Pro missense_variant 0.29
kasA 2518300 c.186T>C synonymous_variant 0.26
kasA 2518303 c.189C>T synonymous_variant 0.3
kasA 2518306 c.192C>G synonymous_variant 0.3
kasA 2518316 p.Val68Ile missense_variant 0.27
kasA 2518322 p.Ser70Ala missense_variant 0.27
kasA 2518336 c.222A>G synonymous_variant 0.22
kasA 2518339 c.225C>G synonymous_variant 0.22
kasA 2518343 p.Met77Leu missense_variant 0.22
kasA 2518348 c.234A>G synonymous_variant 0.21
kasA 2518360 c.246C>T synonymous_variant 0.29
kasA 2518374 p.Gly87Ala missense_variant 0.33
kasA 2518379 c.265T>C synonymous_variant 0.35
kasA 2518386 p.Gly91Ala missense_variant 0.33
kasA 2518390 c.276A>T synonymous_variant 0.35
kasA 2518396 c.282A>C synonymous_variant 0.28
kasA 2518403 p.Ser97Ala missense_variant 0.29
kasA 2518413 p.Ser100Thr missense_variant 0.31
kasA 2518429 c.315A>G synonymous_variant 0.3
kasA 2518439 p.Ala109Ser missense_variant 0.29
kasA 2518444 c.330T>G synonymous_variant 0.29
kasA 2518447 c.333T>C synonymous_variant 0.29
kasA 2518448 p.Val112Ile missense_variant 0.29
kasA 2518459 c.345T>C synonymous_variant 0.26
kasA 2518462 c.348A>G synonymous_variant 0.26
kasA 2518465 c.351T>C synonymous_variant 0.28
kasA 2518468 c.354A>C synonymous_variant 0.29
kasA 2518475 c.361_363delAGGinsCGA synonymous_variant 0.29
kasA 2518480 c.366T>C synonymous_variant 0.28
kasA 2518486 c.372G>A synonymous_variant 0.3
kasA 2518506 p.Ala131Glu missense_variant 0.33
kasA 2518513 c.399C>G synonymous_variant 0.26
kasA 2518519 c.405G>C synonymous_variant 0.25
kasA 2518528 c.414C>T synonymous_variant 0.26
kasA 2518531 c.417G>C synonymous_variant 0.28
kasA 2518537 c.423C>G synonymous_variant 0.28
kasA 2518560 c.447_449delTGC disruptive_inframe_deletion 0.25
kasA 2518565 p.Ala151Ser missense_variant 0.25
kasA 2518572 p.Val153Ala missense_variant 0.26
kasA 2518574 c.460_461insCCG disruptive_inframe_insertion 0.28
kasA 2518579 c.465T>C synonymous_variant 0.26
kasA 2518588 c.474T>G synonymous_variant 0.32
kasA 2518610 p.Thr166Ala missense_variant 0.44
kasA 2518624 c.510C>G synonymous_variant 0.4
kasA 2518627 c.513T>C synonymous_variant 0.4
kasA 2518630 c.516G>A synonymous_variant 0.43
kasA 2518636 c.522C>T synonymous_variant 0.44
kasA 2518645 c.531G>C synonymous_variant 0.46
kasA 2518654 c.540C>T synonymous_variant 0.44
kasA 2518663 c.549T>G synonymous_variant 0.43
kasA 2518670 p.Val186Ile missense_variant 0.42
kasA 2518673 p.Met187Leu missense_variant 0.42
kasA 2518688 p.Val192Ile missense_variant 0.48
kasA 2518693 c.579C>G synonymous_variant 0.47
kasA 2518714 c.600A>C synonymous_variant 0.45
kasA 2518715 p.Pro201Gly missense_variant 0.45
kasA 2518780 p.Glu222Asp missense_variant 0.31
kasA 2518783 c.669T>G synonymous_variant 0.3
kasA 2518786 c.672G>A synonymous_variant 0.31
kasA 2518787 p.Arg225Gly missense_variant 0.29
kasA 2518792 c.678C>A synonymous_variant 0.29
kasA 2518798 c.684G>A synonymous_variant 0.29
kasA 2518816 c.702C>G synonymous_variant 0.32
kasA 2518822 c.708C>G synonymous_variant 0.3
kasA 2518825 c.711T>C synonymous_variant 0.3
kasA 2518828 c.714G>C synonymous_variant 0.3
kasA 2518834 c.720C>T synonymous_variant 0.3
kasA 2518837 c.723G>A synonymous_variant 0.3
kasA 2518843 c.729T>G synonymous_variant 0.29
kasA 2518849 c.735G>C synonymous_variant 0.24
kasA 2518853 p.Leu247Val missense_variant 0.26
kasA 2518861 c.747G>A synonymous_variant 0.28
kasA 2518864 c.750G>C synonymous_variant 0.26
kasA 2518867 c.753G>A synonymous_variant 0.22
kasA 2518879 c.765A>G synonymous_variant 0.24
kasA 2519194 c.1080G>C synonymous_variant 0.24
kasA 2519197 c.1083G>C synonymous_variant 0.26
kasA 2519203 c.1089C>G synonymous_variant 0.31
kasA 2519212 c.1098C>T synonymous_variant 0.33
kasA 2519221 c.1107G>C synonymous_variant 0.33
kasA 2519224 c.1110C>G synonymous_variant 0.33
kasA 2519257 c.1143C>T synonymous_variant 0.35
kasA 2519260 c.1146T>C synonymous_variant 0.33
kasA 2519264 p.Val384Ile missense_variant 0.35
kasA 2519269 c.1155C>G synonymous_variant 0.38
kasA 2519275 c.1161C>A synonymous_variant 0.38
kasA 2519281 c.1167G>C synonymous_variant 0.38
kasA 2519287 c.1173T>C synonymous_variant 0.38
kasA 2519291 p.Asp393Asn missense_variant 0.37
kasA 2519298 p.Arg395Gln missense_variant 0.31
kasA 2519305 c.1191A>G synonymous_variant 0.31
kasA 2519306 p.Val398Ile missense_variant 0.31
kasA 2519323 c.1209G>C synonymous_variant 0.28
kasA 2519332 c.1218C>G synonymous_variant 0.25
kasA 2519338 c.1224T>C synonymous_variant 0.18
ahpC 2726233 p.Gln14Arg missense_variant 0.17
ahpC 2726243 c.51T>G synonymous_variant 0.19
ahpC 2726252 c.60C>T synonymous_variant 0.27
ahpC 2726258 c.66C>T synonymous_variant 0.4
ahpC 2726264 c.72C>G synonymous_variant 0.44
ahpC 2726303 c.111T>C synonymous_variant 0.57
ahpC 2726307 p.Thr39Ser missense_variant 0.5
ahpC 2726312 c.120T>C synonymous_variant 0.52
ahpC 2726318 p.Glu42Asp missense_variant 0.52
ahpC 2726319 p.His43Tyr missense_variant 0.52
ahpC 2726324 c.132A>G synonymous_variant 0.52
ahpC 2726338 p.Val49Gly missense_variant 0.3
ahpC 2726340 p.Val50Ile missense_variant 0.41
ahpC 2726348 c.156T>C synonymous_variant 0.39
ahpC 2726354 c.162G>C synonymous_variant 0.44
ahpC 2726357 c.165A>G synonymous_variant 0.44
ahpC 2726363 c.171C>T synonymous_variant 0.39
ahpC 2726378 c.186T>G synonymous_variant 0.33
ahpC 2726381 c.189C>A synonymous_variant 0.32
ahpC 2726391 p.Ala67Thr missense_variant 0.3
ahpC 2726397 p.Ser69Gly missense_variant 0.26
ahpC 2726408 c.216T>C synonymous_variant 0.21
Rv2752c 3064899 c.1293G>C synonymous_variant 0.2
Rv2752c 3064908 c.1284C>T synonymous_variant 0.2
Rv2752c 3064932 c.1260T>C synonymous_variant 0.27
Rv2752c 3064935 c.1257A>G synonymous_variant 0.27
Rv2752c 3064941 c.1251A>G synonymous_variant 0.27
Rv2752c 3064947 c.1245A>G synonymous_variant 0.26
Rv2752c 3064950 c.1242C>G synonymous_variant 0.25
Rv2752c 3064956 p.Ser412Arg missense_variant 0.24
Rv2752c 3064968 p.Lys408Ala missense_variant 0.24
Rv2752c 3064974 c.1218T>C synonymous_variant 0.26
Rv2752c 3064998 c.1194A>C synonymous_variant 0.25
Rv2752c 3065004 p.Val396Ile missense_variant 0.24
Rv2752c 3065013 c.1179G>C synonymous_variant 0.29
Rv2752c 3065016 c.1176C>T synonymous_variant 0.34
Rv2752c 3065055 c.1137T>C synonymous_variant 0.41
Rv2752c 3065058 c.1134C>G synonymous_variant 0.42
Rv2752c 3065061 c.1131C>T synonymous_variant 0.41
Rv2752c 3065073 c.1119C>G synonymous_variant 0.36
Rv2752c 3065087 c.1105A>C synonymous_variant 0.38
Rv2752c 3065088 c.1104A>G synonymous_variant 0.38
Rv2752c 3065094 c.1098C>T synonymous_variant 0.38
Rv2752c 3065097 c.1095C>T synonymous_variant 0.38
Rv2752c 3065106 c.1086C>T synonymous_variant 0.39
Rv2752c 3065109 c.1081_1083delAGAinsCGC synonymous_variant 0.38
Rv2752c 3065127 c.1065G>T synonymous_variant 0.34
Rv2752c 3065131 p.Ala354Glu missense_variant 0.33
Rv2752c 3065133 c.1059T>C synonymous_variant 0.33
Rv2752c 3065142 c.1050A>C synonymous_variant 0.35
Rv2752c 3065146 p.Phe349Tyr missense_variant 0.35
Rv2752c 3065151 c.1041G>C synonymous_variant 0.33
Rv2752c 3065154 c.1038G>A synonymous_variant 0.33
Rv2752c 3065166 c.1026C>G synonymous_variant 0.24
Rv2752c 3065169 c.1023C>A synonymous_variant 0.24
Rv2752c 3065174 c.1018C>T synonymous_variant 0.24
Rv2752c 3065178 c.1014G>A synonymous_variant 0.21
Rv2752c 3065562 c.630T>C synonymous_variant 0.19
Rv2752c 3065571 c.621G>A synonymous_variant 0.22
Rv2752c 3065576 p.Ala206Ser missense_variant 0.22
Rv2752c 3065595 p.Leu199Phe missense_variant 0.21
Rv2752c 3065598 c.594G>T synonymous_variant 0.21
Rv2752c 3065612 p.Thr194Ala missense_variant 0.19
Rv2752c 3065619 c.573C>G synonymous_variant 0.19
Rv2752c 3065634 c.558G>C synonymous_variant 0.23
Rv2752c 3065637 c.555A>G synonymous_variant 0.24
Rv2752c 3065640 c.552T>C synonymous_variant 0.26
Rv2752c 3065658 p.Pro178Leu missense_variant 0.26
Rv2752c 3065661 c.531A>G synonymous_variant 0.26
Rv2752c 3065664 c.526_528delTTGinsCTT synonymous_variant 0.26
Rv2752c 3065667 c.525A>G synonymous_variant 0.26
Rv2752c 3065675 p.Phe173Leu missense_variant 0.26
Rv2752c 3065699 p.Ile165Val missense_variant 0.22
Rv2752c 3065709 c.483C>A synonymous_variant 0.19
Rv2752c 3065979 c.213T>C synonymous_variant 0.19
Rv2752c 3065993 p.Val67Ile missense_variant 0.21
Rv2752c 3065994 c.198T>C synonymous_variant 0.21
Rv2752c 3066002 p.Met64Leu missense_variant 0.29
Rv2752c 3066018 c.174T>C synonymous_variant 0.28
Rv2752c 3066030 c.162G>A synonymous_variant 0.22
Rv2752c 3066041 p.Gly51Ser missense_variant 0.19
Rv2752c 3066042 c.150T>C synonymous_variant 0.19
Rv2752c 3066118 p.Asn25Ser missense_variant 0.19
Rv2752c 3067002 c.-811G>C upstream_gene_variant 0.2
Rv2752c 3067008 c.-817C>T upstream_gene_variant 0.19
Rv2752c 3067020 c.-829G>C upstream_gene_variant 0.2
Rv2752c 3067062 c.-871A>C upstream_gene_variant 0.19
thyX 3067250 p.Val232Ile missense_variant 0.25
thyX 3067253 c.693G>A synonymous_variant 0.25
thyX 3067268 c.678G>C synonymous_variant 0.26
thyX 3067271 c.675G>C synonymous_variant 0.26
thyX 3067280 p.Val222Ile missense_variant 0.23
thyX 3067284 p.Ala221Asp missense_variant 0.23
thyX 3067287 p.Ala220Ile missense_variant 0.24
thyX 3067289 c.657C>G synonymous_variant 0.25
thyX 3067304 p.Glu214Ala missense_variant 0.25
thyX 3067310 c.636C>G synonymous_variant 0.27
thyX 3067313 c.633G>C synonymous_variant 0.27
thyX 3067316 c.630A>G synonymous_variant 0.26
thyX 3067355 c.591A>G synonymous_variant 0.27
thyX 3067373 c.573C>G synonymous_variant 0.21
thyX 3067376 c.570G>T synonymous_variant 0.18
thyA 3073839 c.633T>C synonymous_variant 0.2
thyA 3073935 c.537C>T synonymous_variant 0.18
thyA 3074285 c.187T>C synonymous_variant 0.26
thyA 3074298 c.174G>A synonymous_variant 0.27
thyA 3074305 p.Ala56Val missense_variant 0.26
thyA 3074307 c.165A>G synonymous_variant 0.24
thyA 3074314 p.Lys53Arg missense_variant 0.23
thyA 3074318 p.Phe52Val missense_variant 0.22
thyA 3074319 c.153T>C synonymous_variant 0.22
thyA 3074322 c.150C>G synonymous_variant 0.23
thyA 3074325 c.147A>G synonymous_variant 0.23
thyA 3074334 c.138T>C synonymous_variant 0.2
thyA 3074339 p.Leu45Ile missense_variant 0.23
thyA 3074349 c.123T>C synonymous_variant 0.23
thyA 3074361 c.111T>C synonymous_variant 0.21
thyA 3074364 c.108T>C synonymous_variant 0.21
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087635 c.816C>T synonymous_variant 0.21
ald 3087641 c.822T>C synonymous_variant 0.22
ald 3087647 c.828A>G synonymous_variant 0.21
ald 3087649 p.Gly277Asp missense_variant 0.2
ald 3087653 c.834A>G synonymous_variant 0.2
ald 3087656 c.837A>G synonymous_variant 0.19
ald 3087710 c.891C>T synonymous_variant 0.19
ald 3087713 c.894G>C synonymous_variant 0.19
ald 3087714 p.Ala299Thr missense_variant 0.19
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474180 c.174C>G synonymous_variant 0.22
fprA 3474204 c.198A>G synonymous_variant 0.33
fprA 3474216 c.210G>C synonymous_variant 0.32
fprA 3474222 c.216G>A synonymous_variant 0.3
fprA 3474228 c.222C>A synonymous_variant 0.31
fprA 3474231 c.225C>G synonymous_variant 0.3
fprA 3474240 c.234C>T synonymous_variant 0.33
fprA 3474252 c.246G>C synonymous_variant 0.35
fprA 3474264 c.258A>G synonymous_variant 0.25
fprA 3474270 c.264C>T synonymous_variant 0.24
fprA 3474274 p.Pro90Ala missense_variant 0.24
fprA 3474278 p.Gly91Ala missense_variant 0.26
fprA 3474282 c.276G>A synonymous_variant 0.26
fprA 3474285 c.279C>G synonymous_variant 0.25
fprA 3474286 p.Ser94Ala missense_variant 0.25
fprA 3474297 c.291C>T synonymous_variant 0.29
fprA 3474312 c.306C>T synonymous_variant 0.24
fprA 3474315 c.309C>G synonymous_variant 0.21
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
fbiB 3642581 c.1047A>C synonymous_variant 0.26
fbiB 3642593 c.1059G>T synonymous_variant 0.26
fbiB 3642602 c.1068A>C synonymous_variant 0.26
fbiB 3642611 c.1077C>T synonymous_variant 0.23
fbiB 3642614 c.1080C>T synonymous_variant 0.26
fbiB 3642623 c.1089C>T synonymous_variant 0.2
fbiB 3642634 p.Asp367Ala missense_variant 0.23
fbiB 3642656 c.1122G>C synonymous_variant 0.22
fbiB 3642668 c.1134A>T synonymous_variant 0.21
rpoA 3877782 c.726T>C synonymous_variant 0.18
rpoA 3877791 c.717C>G synonymous_variant 0.3
rpoA 3877800 c.708G>A synonymous_variant 0.32
rpoA 3877824 c.684G>A synonymous_variant 0.37
rpoA 3877839 c.669G>C synonymous_variant 0.4
rpoA 3877848 c.660C>G synonymous_variant 0.43
rpoA 3877857 c.651G>A synonymous_variant 0.42
rpoA 3877872 c.636C>T synonymous_variant 0.41
rpoA 3877875 c.633T>C synonymous_variant 0.4
rpoA 3877881 c.627G>C synonymous_variant 0.42
rpoA 3877884 c.624G>C synonymous_variant 0.42
rpoA 3877890 c.618C>T synonymous_variant 0.4
rpoA 3877893 c.615C>G synonymous_variant 0.4
rpoA 3877900 p.Ser203Thr missense_variant 0.41
rpoA 3877905 c.603A>G synonymous_variant 0.38
rpoA 3877909 p.Asn200Ser missense_variant 0.42
rpoA 3877920 c.588G>C synonymous_variant 0.47
rpoA 3877971 p.Asp179Glu missense_variant 0.43
rpoA 3877986 c.522G>C synonymous_variant 0.41
rpoA 3877989 c.519A>G synonymous_variant 0.39
rpoA 3878001 c.507A>G synonymous_variant 0.31
rpoA 3878022 c.486T>C synonymous_variant 0.34
rpoA 3878028 c.480G>T synonymous_variant 0.33
rpoA 3878031 c.477T>C synonymous_variant 0.33
rpoA 3878037 c.471C>G synonymous_variant 0.34
rpoA 3878046 c.462T>G synonymous_variant 0.33
rpoA 3878050 p.Arg153Lys missense_variant 0.33
rpoA 3878055 c.453A>G synonymous_variant 0.31
rpoA 3878064 c.444G>A synonymous_variant 0.32
rpoA 3878067 c.441C>G synonymous_variant 0.32
rpoA 3878079 c.429C>G synonymous_variant 0.39
rpoA 3878082 c.426T>C synonymous_variant 0.39
rpoA 3878085 c.423G>A synonymous_variant 0.36
rpoA 3878094 c.414C>T synonymous_variant 0.42
rpoA 3878102 p.Val136Ile missense_variant 0.32
rpoA 3878103 c.405A>G synonymous_variant 0.32
rpoA 3878106 c.402G>C synonymous_variant 0.31
rpoA 3878118 c.390T>C synonymous_variant 0.29
rpoA 3878130 c.378C>G synonymous_variant 0.3
rpoA 3878143 p.Gly122Asp missense_variant 0.26
rpoA 3878163 c.345C>T synonymous_variant 0.24
rpoA 3878169 c.339G>A synonymous_variant 0.27
rpoA 3878184 c.324C>T synonymous_variant 0.27
rpoA 3878193 c.315T>C synonymous_variant 0.21
rpoA 3878202 c.306G>C synonymous_variant 0.19
rpoA 3878271 c.237T>C synonymous_variant 0.21
rpoA 3878276 c.232C>T synonymous_variant 0.23
rpoA 3878283 p.Glu75Asp missense_variant 0.25
rpoA 3878292 c.216T>C synonymous_variant 0.31
rpoA 3878298 c.210A>G synonymous_variant 0.36
rpoA 3878304 c.204G>T synonymous_variant 0.35
rpoA 3878322 c.186A>G synonymous_variant 0.49
rpoA 3878331 c.177A>G synonymous_variant 0.47
rpoA 3878334 c.174T>C synonymous_variant 0.48
rpoA 3878343 c.165C>T synonymous_variant 0.52
rpoA 3878346 c.162T>C synonymous_variant 0.55
rpoA 3878364 c.144A>C synonymous_variant 0.6
rpoA 3878385 c.123C>G synonymous_variant 0.58
rpoA 3878391 c.117T>G synonymous_variant 0.6
rpoA 3878400 c.108T>C synonymous_variant 0.55
rpoA 3878403 c.105C>T synonymous_variant 0.54
rpoA 3878406 c.102G>C synonymous_variant 0.53
rpoA 3878409 c.99C>G synonymous_variant 0.54
rpoA 3878430 c.78G>C synonymous_variant 0.51
rpoA 3878436 c.72A>G synonymous_variant 0.51
rpoA 3878442 c.66G>C synonymous_variant 0.5
rpoA 3878451 c.57C>G synonymous_variant 0.48
rpoA 3878454 c.54A>T synonymous_variant 0.49
rpoA 3878468 p.Leu14Ile missense_variant 0.44
rpoA 3878472 p.Asp12Glu missense_variant 0.42
rpoA 3878475 c.33G>A synonymous_variant 0.42
rpoA 3878487 c.21C>A synonymous_variant 0.44
rpoA 3878490 c.18C>A synonymous_variant 0.42
ddn 3986648 c.-196C>G upstream_gene_variant 0.49
ddn 3986656 c.-188C>G upstream_gene_variant 0.45
ddn 3986665 c.-179G>A upstream_gene_variant 0.42
ddn 3986667 c.-177_-176delCTinsAC upstream_gene_variant 0.35
ddn 3986673 c.-171C>T upstream_gene_variant 0.34
ddn 3986681 c.-163C>G upstream_gene_variant 0.29
ddn 3986687 c.-157C>T upstream_gene_variant 0.25
clpC1 4038222 p.Ala828Val missense_variant 0.19
clpC1 4038239 c.2466T>A synonymous_variant 0.31
clpC1 4038248 c.2457C>G synonymous_variant 0.31
clpC1 4038254 c.2451G>A synonymous_variant 0.36
clpC1 4038266 c.2439C>T synonymous_variant 0.36
clpC1 4038275 c.2430A>G synonymous_variant 0.41
clpC1 4038278 c.2427T>C synonymous_variant 0.41
clpC1 4038302 c.2403C>G synonymous_variant 0.46
clpC1 4038308 c.2397G>C synonymous_variant 0.46
clpC1 4038314 c.2391T>C synonymous_variant 0.45
clpC1 4038320 c.2385G>C synonymous_variant 0.47
clpC1 4038338 c.2367C>T synonymous_variant 0.51
clpC1 4038354 p.Gln784Ala missense_variant 0.49
clpC1 4038356 c.2349T>C synonymous_variant 0.48
clpC1 4038368 c.2337T>C synonymous_variant 0.52
clpC1 4038374 c.2331C>T synonymous_variant 0.5
clpC1 4038388 c.2317T>C synonymous_variant 0.43
clpC1 4038395 c.2310C>T synonymous_variant 0.4
clpC1 4038398 c.2307G>T synonymous_variant 0.42
clpC1 4038419 c.2286T>C synonymous_variant 0.46
clpC1 4038433 c.2272C>T synonymous_variant 0.52
clpC1 4038444 p.Ala754Lys missense_variant 0.55
clpC1 4038446 c.2259T>C synonymous_variant 0.55
clpC1 4038456 p.Val750Glu missense_variant 0.58
clpC1 4038463 p.Ala748Thr missense_variant 0.57
clpC1 4038485 p.Gly740Ala missense_variant 0.48
clpC1 4038488 c.2217C>T synonymous_variant 0.49
clpC1 4038491 c.2214C>T synonymous_variant 0.5
clpC1 4038494 c.2211G>C synonymous_variant 0.52
clpC1 4038509 p.Asp732Glu missense_variant 0.54
clpC1 4038512 c.2193C>G synonymous_variant 0.56
clpC1 4038527 c.2178G>A synonymous_variant 0.56
clpC1 4038530 c.2175G>A synonymous_variant 0.55
clpC1 4038533 p.Arg724Gln missense_variant 0.55
clpC1 4038536 c.2169C>G synonymous_variant 0.59
clpC1 4038551 c.2154C>G synonymous_variant 0.57
clpC1 4038569 c.2136C>T synonymous_variant 0.58
clpC1 4038596 c.2109A>G synonymous_variant 0.51
clpC1 4038623 c.2082A>G synonymous_variant 0.49
clpC1 4038640 p.Asp689Asn missense_variant 0.53
clpC1 4038647 c.2058T>G synonymous_variant 0.52
clpC1 4038657 p.Lys683Pro missense_variant 0.45
clpC1 4038660 c.2044_2045delTCinsAG synonymous_variant 0.45
clpC1 4038671 c.2034T>G synonymous_variant 0.52
clpC1 4038683 c.2022T>C synonymous_variant 0.53
clpC1 4038694 p.Ser671Ala missense_variant 0.51
clpC1 4038698 c.2007C>T synonymous_variant 0.47
clpC1 4038701 c.2004G>C synonymous_variant 0.47
clpC1 4038704 c.2001T>C synonymous_variant 0.48
clpC1 4038713 c.1992T>C synonymous_variant 0.46
clpC1 4038740 c.1965G>C synonymous_variant 0.55
clpC1 4038773 c.1932T>C synonymous_variant 0.53
clpC1 4038812 c.1893T>C synonymous_variant 0.58
clpC1 4038821 c.1884G>A synonymous_variant 0.53
clpC1 4038875 c.1830C>G synonymous_variant 0.57
clpC1 4038878 c.1827A>G synonymous_variant 0.56
clpC1 4038905 c.1800A>C synonymous_variant 0.42
clpC1 4038908 c.1797C>G synonymous_variant 0.43
clpC1 4038920 c.1785C>T synonymous_variant 0.36
clpC1 4038923 c.1782A>C synonymous_variant 0.36
clpC1 4038956 c.1749T>C synonymous_variant 0.41
clpC1 4038965 c.1740T>C synonymous_variant 0.39
clpC1 4038971 c.1734T>C synonymous_variant 0.36
clpC1 4038974 c.1731T>G synonymous_variant 0.37
clpC1 4038989 c.1716T>C synonymous_variant 0.36
clpC1 4038997 c.1708T>C synonymous_variant 0.3
clpC1 4039001 p.Asn568Glu missense_variant 0.28
clpC1 4039004 c.1701C>G synonymous_variant 0.31
clpC1 4039009 c.1696C>T synonymous_variant 0.3
clpC1 4039022 c.1683A>G synonymous_variant 0.33
clpC1 4039031 c.1674T>C synonymous_variant 0.34
clpC1 4039034 c.1671C>G synonymous_variant 0.34
clpC1 4039037 c.1668T>G synonymous_variant 0.33
clpC1 4039043 c.1662G>C synonymous_variant 0.35
clpC1 4039064 c.1641C>T synonymous_variant 0.38
clpC1 4039090 c.1615C>T synonymous_variant 0.33
clpC1 4039097 c.1608G>C synonymous_variant 0.37
clpC1 4039103 c.1602T>C synonymous_variant 0.39
clpC1 4039112 c.1593C>G synonymous_variant 0.35
clpC1 4039121 c.1584T>C synonymous_variant 0.37
clpC1 4039142 c.1563A>G synonymous_variant 0.4
clpC1 4039145 c.1560G>T synonymous_variant 0.41
clpC1 4039166 c.1539G>A synonymous_variant 0.43
clpC1 4039169 c.1536A>G synonymous_variant 0.42
clpC1 4039178 c.1527G>C synonymous_variant 0.5
clpC1 4039187 c.1518G>C synonymous_variant 0.51
clpC1 4039190 c.1515C>G synonymous_variant 0.51
clpC1 4039208 c.1497C>G synonymous_variant 0.45
clpC1 4039226 c.1479T>C synonymous_variant 0.41
clpC1 4039243 c.1462C>T synonymous_variant 0.48
clpC1 4039247 c.1458G>A synonymous_variant 0.44
clpC1 4039274 c.1431G>C synonymous_variant 0.52
clpC1 4039277 c.1428C>G synonymous_variant 0.52
clpC1 4039283 c.1422C>T synonymous_variant 0.48
clpC1 4039286 c.1419T>G synonymous_variant 0.48
clpC1 4039304 c.1401G>A synonymous_variant 0.42
clpC1 4039334 c.1371G>C synonymous_variant 0.33
clpC1 4039337 p.Thr456Gln missense_variant 0.31
clpC1 4039343 c.1362G>A synonymous_variant 0.32
clpC1 4039349 c.1356C>T synonymous_variant 0.37
clpC1 4039358 p.Ser449Ala missense_variant 0.38
clpC1 4039382 c.1323C>G synonymous_variant 0.39
clpC1 4039391 c.1314T>G synonymous_variant 0.39
clpC1 4039397 c.1308A>G synonymous_variant 0.37
clpC1 4039409 c.1296T>C synonymous_variant 0.35
clpC1 4039412 c.1293T>G synonymous_variant 0.3
clpC1 4039427 c.1278G>A synonymous_variant 0.37
clpC1 4039430 c.1275T>C synonymous_variant 0.37
clpC1 4039442 c.1263A>G synonymous_variant 0.38
clpC1 4039454 c.1251A>T synonymous_variant 0.44
clpC1 4039457 c.1248C>G synonymous_variant 0.44
clpC1 4039463 c.1242C>G synonymous_variant 0.44
clpC1 4039466 c.1239T>C synonymous_variant 0.45
clpC1 4039469 c.1236T>C synonymous_variant 0.48
clpC1 4039481 c.1224T>G synonymous_variant 0.46
clpC1 4039484 c.1221T>C synonymous_variant 0.42
clpC1 4039487 c.1218G>C synonymous_variant 0.42
clpC1 4039556 c.1149G>C synonymous_variant 0.46
clpC1 4039559 c.1146C>G synonymous_variant 0.47
clpC1 4039574 p.Ala377Gly missense_variant 0.43
clpC1 4039577 c.1128T>C synonymous_variant 0.43
clpC1 4039601 c.1104G>T synonymous_variant 0.43
clpC1 4039610 c.1095G>T synonymous_variant 0.48
clpC1 4039616 c.1089G>C synonymous_variant 0.47
clpC1 4039625 c.1080G>A synonymous_variant 0.46
clpC1 4039649 c.1056G>C synonymous_variant 0.36
clpC1 4039661 c.1044T>C synonymous_variant 0.34
clpC1 4039664 c.1041G>C synonymous_variant 0.34
clpC1 4039673 c.1032G>C synonymous_variant 0.38
clpC1 4039724 c.981A>G synonymous_variant 0.33
clpC1 4039748 c.957G>C synonymous_variant 0.27
clpC1 4039751 c.954A>G synonymous_variant 0.24
clpC1 4039756 c.949C>T synonymous_variant 0.23
clpC1 4039757 c.948A>G synonymous_variant 0.23
clpC1 4039760 c.945T>C synonymous_variant 0.24
clpC1 4039766 c.939T>C synonymous_variant 0.22
clpC1 4039769 c.936C>G synonymous_variant 0.22
clpC1 4039775 c.930G>C synonymous_variant 0.22
clpC1 4039778 c.927A>G synonymous_variant 0.22
clpC1 4039790 c.915C>G synonymous_variant 0.26
clpC1 4039805 c.900C>T synonymous_variant 0.3
clpC1 4039808 c.897G>A synonymous_variant 0.3
clpC1 4039817 c.888A>C synonymous_variant 0.33
clpC1 4039820 c.885T>C synonymous_variant 0.31
clpC1 4039831 c.874T>C synonymous_variant 0.34
clpC1 4039832 c.873C>A synonymous_variant 0.34
clpC1 4039840 c.865C>T synonymous_variant 0.38
clpC1 4039850 c.855T>C synonymous_variant 0.39
clpC1 4039855 c.850C>T synonymous_variant 0.39
clpC1 4039865 c.840T>C synonymous_variant 0.43
clpC1 4039886 c.819C>G synonymous_variant 0.47
clpC1 4039898 c.805_807delCTCinsTTG synonymous_variant 0.47
clpC1 4039904 c.801A>G synonymous_variant 0.49
clpC1 4039907 c.798G>A synonymous_variant 0.49
clpC1 4039913 c.792C>T synonymous_variant 0.51
clpC1 4039931 c.774T>C synonymous_variant 0.54
clpC1 4039934 c.771G>C synonymous_variant 0.5
clpC1 4039937 c.768G>T synonymous_variant 0.52
clpC1 4039943 c.762G>C synonymous_variant 0.55
clpC1 4039946 c.759A>T synonymous_variant 0.55
clpC1 4039952 c.753T>C synonymous_variant 0.55
clpC1 4039979 c.726C>G synonymous_variant 0.6
clpC1 4039988 c.717C>G synonymous_variant 0.56
clpC1 4039991 c.714G>T synonymous_variant 0.56
clpC1 4039994 p.Glu237Asp missense_variant 0.54
clpC1 4040009 p.Ala232Lys missense_variant 0.45
clpC1 4040015 c.690G>C synonymous_variant 0.44
clpC1 4040020 c.685C>T synonymous_variant 0.44
clpC1 4040021 c.684A>C synonymous_variant 0.44
clpC1 4040024 c.681A>G synonymous_variant 0.47
clpC1 4040051 c.654C>G synonymous_variant 0.5
clpC1 4040090 c.615T>G synonymous_variant 0.44
clpC1 4040093 c.612C>G synonymous_variant 0.4
clpC1 4040168 c.537G>C synonymous_variant 0.18
clpC1 4040171 c.534C>G synonymous_variant 0.18
clpC1 4040177 c.528C>G synonymous_variant 0.22
clpC1 4040183 c.522C>T synonymous_variant 0.26
clpC1 4040201 c.504C>G synonymous_variant 0.2
clpC1 4040207 c.498T>G synonymous_variant 0.2
clpC1 4040219 c.486C>G synonymous_variant 0.21
clpC1 4040225 c.480A>G synonymous_variant 0.23
clpC1 4040228 c.477G>C synonymous_variant 0.25
clpC1 4040234 c.471C>T synonymous_variant 0.44
clpC1 4040240 c.465C>T synonymous_variant 0.45
clpC1 4040249 c.456A>G synonymous_variant 0.45
clpC1 4040252 c.453C>T synonymous_variant 0.45
clpC1 4040257 p.Ala150Thr missense_variant 0.49
clpC1 4040267 c.438A>G synonymous_variant 0.53
clpC1 4040270 c.435C>T synonymous_variant 0.52
clpC1 4040273 c.432T>C synonymous_variant 0.52
clpC1 4040279 c.426C>G synonymous_variant 0.52
clpC1 4040306 c.399G>C synonymous_variant 0.55
clpC1 4040314 c.391C>T synonymous_variant 0.56
clpC1 4040318 c.387C>G synonymous_variant 0.53
clpC1 4040324 c.381G>C synonymous_variant 0.49
clpC1 4040333 c.372G>A synonymous_variant 0.45
clpC1 4040336 c.369G>T synonymous_variant 0.44
clpC1 4040351 c.354C>T synonymous_variant 0.41
clpC1 4040354 c.351A>G synonymous_variant 0.42
clpC1 4040357 c.348T>C synonymous_variant 0.42
clpC1 4040363 c.342A>C synonymous_variant 0.47
clpC1 4040369 c.336C>G synonymous_variant 0.42
clpC1 4040380 c.325T>C synonymous_variant 0.33
clpC1 4040381 c.324T>C synonymous_variant 0.31
clpC1 4040387 c.318A>G synonymous_variant 0.3
clpC1 4040393 c.312G>C synonymous_variant 0.3
clpC1 4040465 c.240T>C synonymous_variant 0.24
clpC1 4040468 c.237G>C synonymous_variant 0.27
clpC1 4040471 c.234T>C synonymous_variant 0.3
clpC1 4040480 c.225T>G synonymous_variant 0.3
clpC1 4040522 c.183T>C synonymous_variant 0.34
clpC1 4040528 c.177G>C synonymous_variant 0.38
clpC1 4040531 c.174T>C synonymous_variant 0.39
clpC1 4040534 c.171A>G synonymous_variant 0.42
clpC1 4040540 c.165G>A synonymous_variant 0.43
clpC1 4040546 c.159G>C synonymous_variant 0.42
clpC1 4040551 c.154T>C synonymous_variant 0.43
clpC1 4040561 c.144A>G synonymous_variant 0.42
clpC1 4040567 c.138C>A synonymous_variant 0.44
clpC1 4040573 c.132T>A synonymous_variant 0.45
clpC1 4040582 c.123G>C synonymous_variant 0.48
clpC1 4040585 c.120A>G synonymous_variant 0.48
clpC1 4040588 c.117T>C synonymous_variant 0.49
clpC1 4040600 c.105A>G synonymous_variant 0.44
clpC1 4040603 c.102T>G synonymous_variant 0.43
clpC1 4040606 c.99T>C synonymous_variant 0.42
clpC1 4040644 c.61A>C synonymous_variant 0.5
clpC1 4040654 c.51G>A synonymous_variant 0.48
clpC1 4040657 c.48T>G synonymous_variant 0.47
clpC1 4040681 c.24T>C synonymous_variant 0.45
clpC1 4040695 c.10C>A synonymous_variant 0.41
clpC1 4040696 c.9A>G synonymous_variant 0.41
clpC1 4040699 c.6C>T synonymous_variant 0.41
clpC1 4040711 c.-7G>A upstream_gene_variant 0.4
clpC1 4040734 c.-31delT upstream_gene_variant 0.25
clpC1 4040744 c.-41delG upstream_gene_variant 0.24
clpC1 4040747 c.-43T>C upstream_gene_variant 0.23
clpC1 4040750 c.-46G>A upstream_gene_variant 0.24
clpC1 4040762 c.-58G>A upstream_gene_variant 0.18
clpC1 4040763 c.-59C>T upstream_gene_variant 0.18
embC 4240717 p.His285Gln missense_variant 0.27
embC 4240726 c.864G>C synonymous_variant 0.3
embC 4240736 p.Ser292Ala missense_variant 0.31
embC 4240777 c.915G>A synonymous_variant 0.44
embC 4240780 c.918T>C synonymous_variant 0.44
embC 4240783 c.921G>C synonymous_variant 0.44
embC 4240789 c.927T>C synonymous_variant 0.44
embC 4240831 c.969T>G synonymous_variant 0.51
embC 4240859 c.997C>T synonymous_variant 0.46
embC 4240867 c.1005T>G synonymous_variant 0.43
embC 4240870 c.1008T>C synonymous_variant 0.42
embC 4240875 p.Ser338Thr missense_variant 0.4
embC 4240885 c.1023T>C synonymous_variant 0.42
embC 4240900 c.1038A>G synonymous_variant 0.3
embC 4240903 c.1041C>G synonymous_variant 0.3
embC 4240910 p.Ala350Leu missense_variant 0.26
embC 4240921 c.1059C>G synonymous_variant 0.27
embC 4240936 c.1074A>G synonymous_variant 0.23
embC 4241017 c.1155T>C synonymous_variant 0.23
embC 4241023 c.1161T>G synonymous_variant 0.22
embC 4241030 c.1168C>T synonymous_variant 0.24
embC 4241039 p.Asp393Asn missense_variant 0.28
embC 4241047 c.1185C>G synonymous_variant 0.26
embC 4241050 c.1188T>G synonymous_variant 0.26
embC 4241053 c.1191G>A synonymous_variant 0.24
embC 4241071 c.1209C>G synonymous_variant 0.3
embC 4241077 c.1215C>A synonymous_variant 0.29
embC 4241080 c.1218C>T synonymous_variant 0.29
embC 4241095 c.1233C>T synonymous_variant 0.34
embC 4241101 c.1239G>C synonymous_variant 0.39
embC 4241104 c.1242G>A synonymous_variant 0.4
embC 4241125 c.1263G>C synonymous_variant 0.37
embC 4241140 c.1278A>G synonymous_variant 0.37
embC 4241158 c.1296T>C synonymous_variant 0.29
embC 4241161 c.1299C>G synonymous_variant 0.29
embC 4241162 c.1300T>C synonymous_variant 0.29
embC 4241168 c.1306C>T synonymous_variant 0.31
embC 4241173 c.1311C>T synonymous_variant 0.31
embC 4241182 c.1320G>C synonymous_variant 0.31
embC 4241185 c.1323G>C synonymous_variant 0.31
embC 4241188 c.1326C>A synonymous_variant 0.3
embC 4241203 c.1341T>G synonymous_variant 0.32
embC 4241215 c.1353C>G synonymous_variant 0.31
embC 4241224 c.1362G>C synonymous_variant 0.21
embC 4241230 c.1368A>G synonymous_variant 0.19
embC 4241233 c.1371G>C synonymous_variant 0.17
embC 4241453 p.Ile531Val missense_variant 0.19
embC 4241479 c.1617C>G synonymous_variant 0.2
embC 4241497 c.1635G>C synonymous_variant 0.24
embC 4241500 c.1638A>G synonymous_variant 0.25
embC 4241518 c.1656A>G synonymous_variant 0.3
embC 4241521 c.1659T>C synonymous_variant 0.3
embC 4241528 c.1666_1668delCGCinsAGG synonymous_variant 0.3
embC 4241536 c.1674A>G synonymous_variant 0.26
embC 4241539 c.1677T>C synonymous_variant 0.27
embC 4241545 c.1683T>G synonymous_variant 0.27
embC 4241548 c.1686T>C synonymous_variant 0.27
embC 4241560 c.1698C>G synonymous_variant 0.26
embC 4241578 c.1716G>C synonymous_variant 0.21
embC 4241587 c.1725C>G synonymous_variant 0.19
embC 4241591 p.Leu577Ile missense_variant 0.2
embC 4241614 c.1752A>C synonymous_variant 0.18
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4245125 c.1893G>T synonymous_variant 0.2
embA 4245135 p.Tyr635Arg missense_variant 0.22
embA 4245189 p.Leu653Ala missense_variant 0.26
embA 4245198 p.Leu656Ala missense_variant 0.28
embA 4245215 c.1983A>C synonymous_variant 0.4
embA 4245222 p.Tyr664Gln missense_variant 0.39
embA 4245234 p.Met668Leu missense_variant 0.39
embA 4245257 c.2025A>G synonymous_variant 0.31
embA 4245264 p.Asp678Pro missense_variant 0.21
embA 4245268 p.Asn679Thr missense_variant 0.22
embA 4245272 c.2040G>C synonymous_variant 0.21
embA 4245281 c.2049C>G synonymous_variant 0.2
embA 4245284 c.2052C>T synonymous_variant 0.2
embA 4245285 c.2053T>C synonymous_variant 0.2
embA 4245290 c.2058C>G synonymous_variant 0.19
embA 4245296 c.2064G>C synonymous_variant 0.21
embA 4245299 c.2067A>G synonymous_variant 0.21
embB 4246250 c.-264G>C upstream_gene_variant 0.17
embA 4246309 p.Thr1026Asn missense_variant 0.19
embB 4246316 c.-198T>G upstream_gene_variant 0.24
embB 4246323 c.-191C>T upstream_gene_variant 0.23
embB 4246352 c.-162G>C upstream_gene_variant 0.23
embA 4246359 p.Ala1043Pro missense_variant 0.23
embB 4246367 c.-147C>T upstream_gene_variant 0.23
embB 4246373 c.-141T>C upstream_gene_variant 0.23
embB 4246376 c.-138G>C upstream_gene_variant 0.23
embB 4246388 c.-126C>A upstream_gene_variant 0.21
embB 4247380 c.867C>G synonymous_variant 0.23
embB 4247389 c.876C>G synonymous_variant 0.29
embB 4247395 c.882C>T synonymous_variant 0.29
embB 4247401 c.888T>C synonymous_variant 0.29
embB 4247404 c.891G>T synonymous_variant 0.29
embB 4247407 c.894G>C synonymous_variant 0.3
embB 4247437 c.924A>C synonymous_variant 0.29
embB 4247470 c.957T>C synonymous_variant 0.31
embB 4247491 c.978G>C synonymous_variant 0.27
embB 4247500 c.987C>G synonymous_variant 0.29
embB 4247512 c.999T>C synonymous_variant 0.27
embB 4247684 c.1171T>C synonymous_variant 0.18
embB 4248085 c.1572T>C synonymous_variant 0.2
embB 4248097 c.1584C>G synonymous_variant 0.28
embB 4248101 c.1588C>T synonymous_variant 0.31
embB 4248118 c.1605T>G synonymous_variant 0.37
embB 4248127 c.1614G>A synonymous_variant 0.38
embB 4248130 c.1617G>T synonymous_variant 0.38
embB 4248133 c.1620C>G synonymous_variant 0.38
embB 4248139 c.1626C>G synonymous_variant 0.39
embB 4248142 c.1629T>C synonymous_variant 0.39
embB 4248157 c.1644A>G synonymous_variant 0.39
embB 4248161 c.1648_1650delCTGinsTTA synonymous_variant 0.39
embB 4248166 c.1653C>T synonymous_variant 0.4
embB 4248167 p.Thr552Ala missense_variant 0.42
embB 4248178 c.1665C>T synonymous_variant 0.48
embB 4248199 c.1686A>G synonymous_variant 0.45
embB 4248200 p.Ile563Val missense_variant 0.45
embB 4248205 c.1692C>T synonymous_variant 0.45
embB 4248206 p.Ser565Gly missense_variant 0.45
embB 4248226 c.1713G>C synonymous_variant 0.51
embB 4248241 c.1728C>T synonymous_variant 0.45
embB 4248266 c.1753C>T synonymous_variant 0.55
embB 4248277 c.1764G>C synonymous_variant 0.55
embB 4248301 c.1788C>T synonymous_variant 0.51
embB 4248305 c.1792C>T synonymous_variant 0.53
embB 4248316 c.1803C>G synonymous_variant 0.5
embB 4248322 c.1809G>T synonymous_variant 0.56
embB 4248334 c.1821C>G synonymous_variant 0.46
embB 4248340 c.1827G>C synonymous_variant 0.46
embB 4248350 c.1837T>C synonymous_variant 0.47
embB 4248355 c.1842A>G synonymous_variant 0.47
embB 4248358 c.1845C>G synonymous_variant 0.47
embB 4248361 c.1848A>G synonymous_variant 0.46
embB 4248362 p.Ser617Lys missense_variant 0.46
embB 4248403 c.1890G>T synonymous_variant 0.33
embB 4248407 c.1894_1896delTTAinsCTG synonymous_variant 0.3
embB 4248410 p.Phe633Met missense_variant 0.3
embB 4248424 c.1911G>A synonymous_variant 0.34
embB 4248425 c.1912T>C synonymous_variant 0.34
embB 4248430 c.1917T>C synonymous_variant 0.33
embB 4248432 p.Trp640Phe missense_variant 0.33
embB 4248448 c.1935C>G synonymous_variant 0.29
embB 4248460 c.1947C>G synonymous_variant 0.25
embB 4249369 c.2856T>C synonymous_variant 0.19
embB 4249381 c.2868A>G synonymous_variant 0.19
embB 4249417 c.2904A>G synonymous_variant 0.3
embB 4249420 c.2907G>T synonymous_variant 0.3
embB 4249432 c.2919A>G synonymous_variant 0.3
embB 4249441 c.2928A>G synonymous_variant 0.26
embB 4249444 c.2931T>C synonymous_variant 0.27
embB 4249447 c.2934G>C synonymous_variant 0.26
embB 4249453 c.2940G>C synonymous_variant 0.23
embB 4249454 p.Thr981Ser missense_variant 0.2
embB 4249466 c.2953C>T synonymous_variant 0.24
embB 4249469 p.Leu986Met missense_variant 0.24
embB 4249480 c.2967G>T synonymous_variant 0.2
embB 4249558 c.3045A>C synonymous_variant 0.17
embB 4249581 p.Leu1023Gln missense_variant 0.2
embB 4249594 c.3081G>C synonymous_variant 0.22
embB 4249640 c.3127T>C synonymous_variant 0.21
embB 4249686 p.Ala1058Gly missense_variant 0.19
aftB 4267647 p.Asp397Gly missense_variant 0.91
aftB 4268994 c.-158T>C upstream_gene_variant 0.21
ubiA 4269006 p.Asp276Glu missense_variant 0.25
aftB 4269012 c.-176G>C upstream_gene_variant 0.26
aftB 4269015 c.-179G>A upstream_gene_variant 0.3
aftB 4269027 c.-191C>G upstream_gene_variant 0.37
aftB 4269033 c.-197T>C upstream_gene_variant 0.38
aftB 4269042 c.-206G>C upstream_gene_variant 0.39
aftB 4269048 c.-212C>T upstream_gene_variant 0.43
aftB 4269051 c.-215C>T upstream_gene_variant 0.45
ubiA 4269075 p.Ile253Val missense_variant 0.55
ubiA 4269088 p.Ala249Val missense_variant 0.57
aftB 4269090 c.-254C>T upstream_gene_variant 0.57
aftB 4269096 c.-260C>A upstream_gene_variant 0.6
ubiA 4269103 p.Ser244Ala missense_variant 0.58
aftB 4269114 c.-278C>T upstream_gene_variant 0.61
aftB 4269123 c.-287T>G upstream_gene_variant 0.61
ubiA 4269143 p.Leu231Val missense_variant 0.6
aftB 4269144 c.-308C>G upstream_gene_variant 0.6
ubiA 4269164 p.Leu224Met missense_variant 0.59
aftB 4269171 c.-335C>G upstream_gene_variant 0.58
ubiA 4269199 p.Ser212Thr missense_variant 0.53
aftB 4269210 c.-374G>A upstream_gene_variant 0.53
ubiA 4269219 p.Ala205Asn missense_variant 0.5
aftB 4269222 c.-386T>C upstream_gene_variant 0.47
aftB 4269234 c.-398A>G upstream_gene_variant 0.47
ubiA 4269243 p.His197Val missense_variant 0.42
aftB 4269270 c.-434G>C upstream_gene_variant 0.3
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0