Rv1221 - c.607C>T
Drug resistance types
5 Sensitive
0 RR-TB
10 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.9 | 6 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage5.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 27 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR5341330 | Other | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| SRR6044942 | HR-TB | lineage4.9 | None |
| ERR439952 | Sensitive | lineage5.3 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR4796612 | Pre-XDR-TB | lineage3 | in |
| ERR387051 | Other | lineage4.9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| SRR29017081 | Sensitive | lineage4.9 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR28351584 | HR-TB | lineage2.2.1 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
