TB-Profiler result

Run: SRR8217918

Summary

Run ID: SRR8217918

Sample name:

Date: 2024-04-15T15:29:38.475859

Number of reads: 1214598

Percentage reads mapped: 32.65

Median coverage: 22.0

Strain: lineage4.9

Spoligotype:

Drug-resistance: HR-TB


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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage1.2.1.2 Indo-Oceanic RD239 0.08
lineage2.2 East-Asian (Beijing) RD105;RD207 0.99
lineage4.9 Euro-American (H37Rv-like) None 0.4
lineage2.2.1.1 East-Asian (Beijing) RD105;RD207;RD181;RD150 0.93
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid katG p.Ile335Thr Mutation from literature
p.Ile317Leu Mutation from literature
ethambutol
pyrazinamide
streptomycin
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid fgd1 c.196_198delAACinsGG Assoc w R - Interim Confers DLM-PMD cross-resistance
c.202_204delCTGinsAT Assoc w R - Interim Confers DLM-PMD cross-resistance
c.280_282delGGAinsAC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.301_303delGTTinsAC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.394_396delCTGinsTA Assoc w R - Interim Confers DLM-PMD cross-resistance
c.409_411delGGGinsCC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.730_732delAACinsGG Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC c.729delTinsCAC Assoc w R - Interim Confers DLM-PMD cross-resistance
c.1741_1742delGTinsACGG Assoc w R - Interim Confers DLM-PMD cross-resistance
c.1748_1749delAG Assoc w R - Interim Confers DLM-PMD cross-resistance
c.1825_1827delCTAinsTG Assoc w R - Interim Confers DLM-PMD cross-resistance
c.1963_1965delGGCinsAT Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiA c.166_168delCTGinsGA Assoc w R - Interim Confers DLM-PMD cross-resistance
c.337_339delCTGinsTA Assoc w R - Interim Confers DLM-PMD cross-resistance
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
fgd1 490978 c.196_198delAACinsGG frameshift_variant&missense_variant 0.65 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 490984 c.202_204delCTGinsAT frameshift_variant&missense_variant 0.7 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491062 c.280_282delGGAinsAC frameshift_variant&missense_variant 0.69 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491083 c.301_303delGTTinsAC frameshift_variant&missense_variant 0.68 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491176 c.394_396delCTGinsTA frameshift_variant&stop_gained 0.84 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491191 c.409_411delGGGinsCC frameshift_variant&missense_variant 0.85 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fgd1 491512 c.730_732delAACinsGG frameshift_variant&missense_variant 0.81 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1303659 c.729delTinsCAC frameshift_variant&synonymous_variant 0.52 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1304671 c.1741_1742delGTinsACGG frameshift_variant&missense_variant 0.58 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1304674 c.1748_1749delAG frameshift_variant 0.6 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1304755 c.1825_1827delCTAinsTG frameshift_variant&stop_gained 0.65 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiC 1304893 c.1963_1965delGGCinsAT frameshift_variant&missense_variant 0.42 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
katG 2155108 p.Ile335Thr missense_variant 0.57 isoniazid Mutation from literature
katG 2155163 p.Ile317Leu missense_variant 0.35 isoniazid Mutation from literature
fbiA 3640708 c.166_168delCTGinsGA frameshift_variant&missense_variant 0.29 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
fbiA 3640879 c.337_339delCTGinsTA frameshift_variant&stop_gained 0.38 delamanid Assoc w R - Interim Confers DLM-PMD cross-resistance
pretomanid Assoc w R - Interim Confers DLM-PMD cross-resistance
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
dnaA 579 c.579C>T synonymous_variant 0.64 isoniazid
dnaA 582 c.582A>T synonymous_variant 0.64 isoniazid
dnaA 585 c.585A>G synonymous_variant 0.62 isoniazid
dnaA 591 c.591C>G synonymous_variant 0.69 isoniazid
dnaA 600 c.600T>C synonymous_variant 0.71 isoniazid
dnaA 609 c.609C>G synonymous_variant 0.72 isoniazid
dnaA 610 c.610C>T synonymous_variant 0.72 isoniazid
dnaA 633 c.633T>A synonymous_variant 0.74 isoniazid
dnaA 636 c.636C>G synonymous_variant 0.71 isoniazid
dnaA 651 c.651G>C synonymous_variant 0.69 isoniazid
dnaA 654 c.654A>G synonymous_variant 0.67 isoniazid
dnaA 657 c.657C>T synonymous_variant 0.67 isoniazid Not assoc w R - Interim
dnaA 663 c.663A>C synonymous_variant 0.68 isoniazid
dnaA 672 c.672T>C synonymous_variant 0.64 isoniazid Not assoc w R - Interim
dnaA 678 c.678A>G synonymous_variant 0.6 isoniazid Not assoc w R - Interim
dnaA 681 c.681G>A synonymous_variant 0.6 isoniazid
dnaA 682 c.682_684delTTGinsCC frameshift_variant&missense_variant 0.6 isoniazid Uncertain significance
dnaA 690 c.690G>C synonymous_variant 0.62 isoniazid
dnaA 693 c.693A>C synonymous_variant 0.62 isoniazid
dnaA 699 c.699G>C synonymous_variant 0.65 isoniazid Not assoc w R - Interim
dnaA 705 c.705A>G synonymous_variant 0.62 isoniazid
dnaA 708 c.708T>C synonymous_variant 0.62 isoniazid
dnaA 720 c.720G>A synonymous_variant 0.62 isoniazid
dnaA 723 c.723A>G synonymous_variant 0.62 isoniazid
dnaA 741 c.741T>C synonymous_variant 0.65 isoniazid Not assoc w R - Interim
dnaA 747 c.747G>A synonymous_variant 0.65 isoniazid
dnaA 750 c.750C>G synonymous_variant 0.67 isoniazid
dnaA 768 c.768C>G synonymous_variant 0.74 isoniazid
dnaA 771 c.771A>C synonymous_variant 0.74 isoniazid
dnaA 795 c.795A>G synonymous_variant 0.72 isoniazid
dnaA 801 c.801G>C synonymous_variant 0.72 isoniazid
dnaA 802 c.802C>T synonymous_variant 0.72 isoniazid
dnaA 805 c.805_807delTTGinsCC frameshift_variant&missense_variant 0.72 isoniazid Uncertain significance
dnaA 819 c.819C>T synonymous_variant 0.76 isoniazid
dnaA 822 c.822A>G synonymous_variant 0.76 isoniazid
dnaA 828 c.828T>C synonymous_variant 0.76 isoniazid Not assoc w R - Interim
dnaA 831 c.831A>G synonymous_variant 0.76 isoniazid
gyrB 6046 c.807C>T synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6047 p.Ala270Ser missense_variant 0.56 levofloxacin
moxifloxacin
gyrB 6052 c.813T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrB 6055 c.816T>C synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrB 6067 c.828G>C synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrB 6073 c.834T>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrB 6086 c.847_849delACCinsCG frameshift_variant&missense_variant 0.67 levofloxacin Uncertain significance
moxifloxacin
gyrB 6091 c.852G>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrB 6100 c.861G>C synonymous_variant 0.71 levofloxacin
moxifloxacin
gyrB 6109 c.870G>C synonymous_variant 0.74 levofloxacin
moxifloxacin
gyrB 6115 c.876A>G synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrB 6127 c.888G>C synonymous_variant 0.77 levofloxacin
moxifloxacin
gyrB 6148 c.909C>G synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrB 6169 c.930C>G synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrB 6214 c.975G>C synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrB 6217 c.978G>C synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 6565 c.-737G>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 6571 c.-731T>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrB 6577 c.1338T>C synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6583 c.-719G>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 6592 c.-710C>T upstream_gene_variant 0.71 levofloxacin
moxifloxacin
gyrA 6598 c.-704C>G upstream_gene_variant 0.75 levofloxacin
moxifloxacin
gyrA 6610 c.-692C>G upstream_gene_variant 0.81 levofloxacin
moxifloxacin
gyrA 6616 c.-686A>G upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrA 6622 c.-680C>T upstream_gene_variant 0.87 levofloxacin
moxifloxacin
gyrA 6628 c.-674C>G upstream_gene_variant 0.84 levofloxacin
moxifloxacin
gyrA 6634 c.-668T>C upstream_gene_variant 0.84 levofloxacin
moxifloxacin
gyrA 6637 c.-665T>A upstream_gene_variant 0.84 levofloxacin
moxifloxacin
gyrA 6640 c.-662A>C upstream_gene_variant 0.84 levofloxacin
moxifloxacin
gyrA 6646 c.-656C>T upstream_gene_variant 0.84 levofloxacin
moxifloxacin
gyrA 6673 c.-629A>C upstream_gene_variant 0.89 levofloxacin
moxifloxacin
gyrA 6676 c.-626T>C upstream_gene_variant 0.9 levofloxacin
moxifloxacin
gyrB 6680 c.1441C>T synonymous_variant 0.9 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6685 c.-617C>G upstream_gene_variant 0.9 levofloxacin
moxifloxacin
gyrA 6700 c.-602T>C upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrA 6703 c.-599G>C upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrA 6709 c.-593A>G upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrA 6712 c.-590G>C upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrB 6715 c.1476C>T synonymous_variant 0.97 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrA 6724 c.-578G>C upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrB 6727 c.1488G>A synonymous_variant 0.97 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6730 c.-572A>G upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrA 6742 c.-560A>G upstream_gene_variant 0.97 levofloxacin
moxifloxacin
gyrB 6745 c.1506T>C synonymous_variant 0.96 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6760 c.-542G>C upstream_gene_variant 0.95 levofloxacin
moxifloxacin
gyrA 6763 c.-539G>A upstream_gene_variant 0.95 levofloxacin
moxifloxacin
gyrB 6775 c.1536G>A synonymous_variant 0.94 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 6778 c.-524C>T upstream_gene_variant 1.0 levofloxacin
moxifloxacin
gyrA 6787 c.-515G>A upstream_gene_variant 1.0 levofloxacin
moxifloxacin
gyrB 6793 c.1554T>C synonymous_variant 1.0 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6797 p.Gly520Thr missense_variant 1.0 levofloxacin
moxifloxacin
gyrA 6820 c.-482C>T upstream_gene_variant 0.9 levofloxacin
moxifloxacin
gyrA 7066 c.-236G>T upstream_gene_variant 0.6 levofloxacin
moxifloxacin
gyrA 7078 c.-224A>C upstream_gene_variant 0.62 levofloxacin
moxifloxacin
gyrB 7093 c.1854T>C synonymous_variant 0.74 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 7100 c.1861T>C synonymous_variant 0.76 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7108 c.-194G>A upstream_gene_variant 0.77 levofloxacin
moxifloxacin
gyrA 7114 c.-188C>A upstream_gene_variant 0.8 levofloxacin
moxifloxacin
gyrA 7120 c.-182T>C upstream_gene_variant 0.8 levofloxacin
moxifloxacin
gyrA 7123 c.-179C>A upstream_gene_variant 0.8 levofloxacin
moxifloxacin
gyrA 7132 c.-170T>G upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrA 7136 c.-166T>C upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrA 7141 c.-161T>C upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrA 7144 c.-158A>G upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrA 7150 c.-152G>T upstream_gene_variant 0.86 levofloxacin
moxifloxacin
gyrB 7153 c.1914G>C synonymous_variant 0.83 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7165 c.-137C>T upstream_gene_variant 0.82 levofloxacin
moxifloxacin
gyrB 7186 c.1947C>G synonymous_variant 0.75 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 7187 c.1948_1950delATCinsGT frameshift_variant&missense_variant 0.75 levofloxacin Uncertain significance
moxifloxacin
gyrB 7198 c.1959C>T synonymous_variant 0.75 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7201 c.-101G>A upstream_gene_variant 0.75 levofloxacin
moxifloxacin
gyrB 7210 p.Asp657Glu missense_variant 0.74 levofloxacin
moxifloxacin
gyrA 7216 c.-86G>T upstream_gene_variant 0.72 levofloxacin
moxifloxacin
gyrB 7219 c.1980C>T synonymous_variant 0.71 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7225 c.-77T>C upstream_gene_variant 0.7 levofloxacin
moxifloxacin
gyrB 7234 c.1995C>T synonymous_variant 0.69 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7243 c.-59G>A upstream_gene_variant 0.5 levofloxacin
moxifloxacin
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7394 c.93T>C synonymous_variant 0.3 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7397 c.96G>C synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7406 c.105G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7415 c.114C>T synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrA 7418 c.117C>T synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 7430 c.129G>A synonymous_variant 0.43 levofloxacin
moxifloxacin
gyrA 7442 c.141G>A synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 7472 c.171T>C synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7475 c.174A>G synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7484 c.183T>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7490 c.189C>G synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 7499 c.198G>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7763 c.462T>G synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 7784 c.483A>G synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrA 7796 c.495G>A synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 7799 c.498A>G synonymous_variant 0.53 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7802 c.501C>G synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 7817 c.516C>T synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 7835 c.534A>G synonymous_variant 0.42 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7859 c.558A>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 8126 c.825G>C synonymous_variant 0.52 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8156 c.855T>C synonymous_variant 0.59 levofloxacin
moxifloxacin
gyrA 8168 c.867A>G synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 8171 c.870G>A synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 8174 c.873C>G synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8177 c.876A>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8186 c.885G>A synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8189 c.888G>C synonymous_variant 0.61 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8198 c.897T>C synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8199 p.Ser300Ala missense_variant 0.62 levofloxacin
moxifloxacin
gyrA 8204 c.903C>T synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 8217 c.916_918delTCTinsAGC synonymous_variant 0.64 levofloxacin
moxifloxacin
gyrA 8231 c.930C>T synonymous_variant 0.65 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8234 c.933T>G synonymous_variant 0.64 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8235 c.934_936delTTAinsCG frameshift_variant&missense_variant 0.64 levofloxacin
moxifloxacin
gyrA 8253 p.Ile318Leu missense_variant 0.71 levofloxacin
moxifloxacin
gyrA 8264 c.963T>C synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 8283 c.982_984delATCinsCG frameshift_variant&missense_variant 0.5 levofloxacin
moxifloxacin
gyrA 8288 c.987T>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8294 c.993T>C synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8318 c.1017C>G synonymous_variant 0.71 levofloxacin
moxifloxacin
gyrA 8339 c.1038A>G synonymous_variant 0.74 levofloxacin
moxifloxacin
gyrA 8351 c.1050C>T synonymous_variant 0.77 levofloxacin
moxifloxacin
gyrA 8367 c.1066C>T synonymous_variant 0.79 levofloxacin
moxifloxacin
gyrA 8375 c.1074G>T synonymous_variant 0.76 levofloxacin
moxifloxacin
gyrA 8390 c.1089C>G synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 8391 c.1090_1092delTATinsCC frameshift_variant&missense_variant 0.68 levofloxacin
moxifloxacin
gyrA 8399 c.1098T>G synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 8400 p.Asp367Asn missense_variant 0.69 levofloxacin
moxifloxacin
gyrA 8408 c.1107A>G synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrA 8411 c.1110C>G synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrA 8420 c.1119T>C synonymous_variant 0.78 levofloxacin
moxifloxacin
gyrA 8453 c.1152A>C synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrA 8459 c.1158G>A synonymous_variant 0.72 levofloxacin
moxifloxacin
gyrA 8462 c.1161A>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8468 c.1167C>T synonymous_variant 0.65 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8472 c.1171C>T synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 8480 c.1179C>A synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 8486 c.1185T>C synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8489 c.1188A>G synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 8501 c.1200G>C synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8504 c.1203G>C synonymous_variant 0.43 levofloxacin
moxifloxacin
gyrA 8507 c.1206C>T synonymous_variant 0.43 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8510 c.1209G>A synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8513 c.1212C>G synonymous_variant 0.43 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8516 c.1215T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 8519 c.1218A>C synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 8531 c.1230G>C synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 8534 c.1233G>A synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8537 c.1236G>A synonymous_variant 0.65 levofloxacin
moxifloxacin
gyrA 8555 c.1254G>A synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8556 p.Ala419Gln missense_variant 0.62 levofloxacin
moxifloxacin
gyrA 8561 c.1260A>T synonymous_variant 0.64 levofloxacin
moxifloxacin
gyrA 8580 p.Ile427Val missense_variant 0.71 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8597 c.1296C>G synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8603 c.1302A>G synonymous_variant 0.75 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8619 c.1318T>C synonymous_variant 0.89 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8624 c.1323G>C synonymous_variant 0.89 levofloxacin
moxifloxacin
gyrA 8633 c.1332C>T synonymous_variant 0.91 levofloxacin
moxifloxacin
gyrA 8636 c.1335A>G synonymous_variant 0.91 levofloxacin
moxifloxacin
gyrA 8637 c.1336C>T synonymous_variant 0.9 levofloxacin
moxifloxacin
gyrA 8642 c.1341A>G synonymous_variant 0.89 levofloxacin
moxifloxacin
gyrA 8672 c.1371A>G synonymous_variant 0.88 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8693 c.1392T>C synonymous_variant 0.88 levofloxacin
moxifloxacin
gyrA 8705 c.1404C>T synonymous_variant 0.87 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8706 c.1405C>T synonymous_variant 0.87 levofloxacin
moxifloxacin
gyrA 8711 c.1410A>C synonymous_variant 0.87 levofloxacin
moxifloxacin
gyrA 8717 c.1416C>G synonymous_variant 0.86 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8723 c.1422G>A synonymous_variant 0.84 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8729 c.1428T>C synonymous_variant 0.83 levofloxacin
moxifloxacin
gyrA 8730 c.1429_1431delGGGinsCC frameshift_variant&missense_variant 0.83 levofloxacin
moxifloxacin
gyrA 8740 p.Arg480His missense_variant 0.83 levofloxacin
moxifloxacin
gyrA 8751 p.Ala484Lys missense_variant 0.76 levofloxacin
moxifloxacin
gyrA 8756 c.1455A>G synonymous_variant 0.74 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8762 c.1461G>C synonymous_variant 0.73 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8767 p.Arg489Lys missense_variant 0.74 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8783 c.1482G>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8786 c.1485T>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8792 c.1491G>C synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 8796 c.1495_1497delATCinsGG frameshift_variant&missense_variant 0.63 levofloxacin
moxifloxacin
gyrA 8801 c.1500G>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8813 c.1512C>T synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 8829 c.1528T>C synonymous_variant 0.4 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8846 c.1545C>T synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 8852 c.1551T>C synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 8858 c.1557T>G synonymous_variant 0.42 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8867 c.1566A>G synonymous_variant 0.5 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8870 c.1569G>C synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8873 c.1572A>G synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8897 c.1596T>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8900 c.1599G>C synonymous_variant 0.54 levofloxacin
moxifloxacin
gyrA 8903 c.1602T>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8915 c.1614A>G synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8933 c.1632G>C synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 8936 c.1635G>A synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 8939 c.1638T>G synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8945 c.1644G>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 8946 c.1645_1647delTTGinsCC frameshift_variant&missense_variant 0.62 levofloxacin
moxifloxacin
gyrA 8966 c.1665C>T synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8967 p.Ala556Arg missense_variant 0.68 levofloxacin
moxifloxacin
gyrA 8987 c.1686C>G synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 8990 c.1689C>A synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8996 c.1695T>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8998 p.Leu566Trp missense_variant 0.74 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9023 c.1722A>C synonymous_variant 0.74 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9029 c.1728T>C synonymous_variant 0.73 levofloxacin
moxifloxacin
gyrA 9038 c.1737C>T synonymous_variant 0.75 levofloxacin
moxifloxacin
gyrA 9044 c.1743C>G synonymous_variant 0.72 levofloxacin
moxifloxacin
gyrA 9051 c.1750T>C synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 9056 c.1755C>G synonymous_variant 0.7 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9080 c.1779G>A synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 9089 c.1788G>C synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 9092 c.1791C>G synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 9101 c.1800A>G synonymous_variant 0.59 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9119 c.1818A>G synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 9131 c.1830G>A synonymous_variant 0.43 levofloxacin
moxifloxacin
gyrA 9218 c.1917C>T synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9230 c.1929T>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 9233 c.1932C>G synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 9236 c.1935G>C synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 9248 c.1947G>C synonymous_variant 0.65 levofloxacin
moxifloxacin
gyrA 9251 c.1950G>A synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 9254 c.1953C>G synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 9263 c.1962C>G synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9266 c.1965C>T synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 9267 p.Asn656Gly missense_variant 0.68 levofloxacin
moxifloxacin
gyrA 9275 c.1974G>A synonymous_variant 0.71 levofloxacin
moxifloxacin
gyrA 9284 c.1983T>C synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 9287 c.1986G>C synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 9304 p.Gly668Asp missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 9308 p.Asp669Glu missense_variant 0.69 levofloxacin
moxifloxacin
gyrA 9335 c.2034G>C synonymous_variant 0.69 levofloxacin
moxifloxacin
gyrA 9341 c.2040C>G synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 9345 c.2044A>C synonymous_variant 0.67 levofloxacin
moxifloxacin
gyrA 9356 c.2055G>A synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrA 9365 c.2064G>A synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 9368 c.2067G>A synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 9374 c.2073G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9383 c.2082T>A synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 9386 c.2085T>C synonymous_variant 0.5 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9392 c.2091C>T synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 9395 c.2094G>C synonymous_variant 0.51 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9419 c.2118T>C synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 9420 p.Ile707Ala missense_variant 0.43 levofloxacin
moxifloxacin
gyrA 9429 p.Arg710Tyr missense_variant 0.44 levofloxacin
moxifloxacin
gyrA 9437 c.2136G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9441 c.2140C>T synonymous_variant 0.47 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9449 c.2148C>G synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9452 c.2151G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9455 c.2154T>G synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 9464 c.2163C>A synonymous_variant 0.46 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9482 c.2181G>A synonymous_variant 0.41 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrA 9485 c.2184A>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9488 c.2187G>C synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 9494 c.2193T>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9497 c.2196G>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9500 c.2199A>G synonymous_variant 0.39 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9503 c.2202T>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9518 c.2217A>G synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 9605 c.2304C>T synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 9608 c.2307C>T synonymous_variant 0.32 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9621 p.Leu774Val missense_variant 0.49 levofloxacin
moxifloxacin
gyrA 9630 p.Val777Ile missense_variant 0.55 levofloxacin
moxifloxacin
gyrA 9635 c.2334T>C synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 9644 c.2343T>C synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 9647 c.2346C>G synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 9650 c.2349G>A synonymous_variant 0.55 levofloxacin
moxifloxacin
gyrA 9659 c.2358C>G synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrA 9665 c.2364A>G synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 9668 c.2367C>G synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 9674 c.2373T>C synonymous_variant 0.6 levofloxacin
moxifloxacin
gyrA 9677 c.2376C>T synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 9683 c.2382G>C synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 9686 c.2385A>T synonymous_variant 0.62 levofloxacin
moxifloxacin
gyrA 9701 c.2400T>C synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9716 c.2415T>C synonymous_variant 0.59 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9717 c.2416C>T synonymous_variant 0.59 levofloxacin
moxifloxacin
gyrA 9740 c.2439G>A synonymous_variant 0.57 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9749 c.2448G>A synonymous_variant 0.48 levofloxacin
moxifloxacin
gyrA 9755 c.2454C>T synonymous_variant 0.43 levofloxacin
moxifloxacin
fgd1 490809 c.27A>G synonymous_variant 0.43 clofazimine
pretomanid
delamanid
fgd1 490818 c.36C>G synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 490830 c.48A>G synonymous_variant 0.52 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 490836 c.54C>G synonymous_variant 0.52 clofazimine
pretomanid
delamanid
fgd1 490848 c.66A>G synonymous_variant 0.48 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 490851 c.69A>G synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 490854 c.72C>G synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 490857 c.75C>T synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 490866 c.84A>G synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 490869 c.87C>T synonymous_variant 0.48 clofazimine
pretomanid
delamanid
fgd1 490875 c.93C>T synonymous_variant 0.45 clofazimine
pretomanid
delamanid
fgd1 490881 c.99C>T synonymous_variant 0.45 clofazimine
pretomanid
delamanid
fgd1 490887 c.105G>C synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fgd1 490890 c.108C>G synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fgd1 490902 c.120T>C synonymous_variant 0.57 clofazimine
pretomanid
delamanid
fgd1 490911 c.129T>A synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fgd1 490917 c.135C>G synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fgd1 490921 p.Gln47Glu missense_variant 0.62 clofazimine
pretomanid
delamanid
fgd1 490929 c.147C>G synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fgd1 490935 c.153C>G synonymous_variant 0.66 clofazimine
pretomanid
delamanid
fgd1 490962 c.180T>G synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fgd1 490968 c.186C>T synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fgd1 490971 c.189A>G synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fgd1 490974 c.192T>C synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fgd1 490983 c.201G>C synonymous_variant 0.7 clofazimine
pretomanid
delamanid
fgd1 490998 c.216T>C synonymous_variant 0.69 clofazimine
pretomanid
delamanid
fgd1 491001 c.219G>A synonymous_variant 0.69 clofazimine
pretomanid
delamanid
fgd1 491004 c.222G>A synonymous_variant 0.69 clofazimine
pretomanid
delamanid
fgd1 491013 c.231C>G synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fgd1 491038 p.Ile86Val missense_variant 0.77 clofazimine
pretomanid
delamanid
fgd1 491043 c.261T>G synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fgd1 491049 c.267T>A synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fgd1 491067 c.285C>T synonymous_variant 0.72 clofazimine Not assoc w R - Interim
pretomanid
delamanid
fgd1 491077 p.Asn99Gly missense_variant 0.68 clofazimine
pretomanid
delamanid
fgd1 491082 c.300T>C synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fgd1 491091 c.309T>G synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fgd1 491097 c.315G>A synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fgd1 491106 c.324T>G synonymous_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491109 c.327G>A synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fgd1 491113 c.331C>T synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491121 c.339A>G synonymous_variant 0.9 clofazimine
pretomanid
delamanid
fgd1 491144 p.Ala121Asp missense_variant 0.9 clofazimine
pretomanid
delamanid
fgd1 491166 c.384G>C synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491181 c.399T>C synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fgd1 491187 c.405G>A synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491196 c.414A>G synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491202 c.420G>C synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491203 p.Gln141Glu missense_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491206 c.424C>T synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491212 p.Ser144Arg missense_variant 0.86 clofazimine
pretomanid
delamanid
fgd1 491217 c.435T>C synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fgd1 491223 c.441C>G synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fgd1 491232 c.450T>C synonymous_variant 0.87 clofazimine
pretomanid
delamanid
fgd1 491244 c.462T>C synonymous_variant 0.89 clofazimine
pretomanid
delamanid
fgd1 491259 c.477T>C synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491283 p.Asp167Glu missense_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491286 c.504G>C synonymous_variant 0.8 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 491289 c.507C>G synonymous_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491295 c.513C>G synonymous_variant 0.8 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 491296 p.Val172Ile missense_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491322 c.540G>T synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fgd1 491337 c.555C>G synonymous_variant 0.85 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 491340 c.558C>G synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fgd1 491343 c.561C>G synonymous_variant 0.86 clofazimine
pretomanid
delamanid
fgd1 491364 c.582T>C synonymous_variant 0.8 clofazimine
pretomanid
delamanid
fgd1 491367 c.585G>C synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fgd1 491379 c.597C>T synonymous_variant 0.73 clofazimine
pretomanid
delamanid
fgd1 491472 c.690A>G synonymous_variant 0.74 clofazimine
pretomanid
delamanid
fgd1 491490 c.708C>T synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fgd1 491508 c.726A>G synonymous_variant 0.81 clofazimine
pretomanid
delamanid
fgd1 491509 c.727T>C synonymous_variant 0.81 clofazimine
pretomanid
delamanid
fgd1 491523 c.741G>A synonymous_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491526 c.744T>C synonymous_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491542 c.760T>C synonymous_variant 0.86 clofazimine
pretomanid
delamanid
fgd1 491547 c.765A>C synonymous_variant 0.86 clofazimine
pretomanid
delamanid
fgd1 491550 c.768T>C synonymous_variant 0.89 clofazimine
pretomanid
delamanid
fgd1 491556 c.774G>A synonymous_variant 0.86 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 491583 c.801G>A synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fgd1 491601 c.819T>C synonymous_variant 0.81 clofazimine
pretomanid
delamanid
fgd1 491603 p.Ala274Glu missense_variant 0.81 clofazimine
pretomanid
delamanid
fgd1 491610 c.828A>G synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fgd1 491620 p.Ile280Val missense_variant 0.82 clofazimine
pretomanid
delamanid
fgd1 491628 c.846G>A synonymous_variant 0.8 clofazimine
pretomanid
delamanid
fgd1 491649 c.867C>T synonymous_variant 0.78 clofazimine
pretomanid
delamanid
fgd1 491658 c.876A>G synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fgd1 491673 c.891A>C synonymous_variant 0.75 clofazimine
pretomanid
delamanid
fgd1 491676 c.894T>C synonymous_variant 0.75 clofazimine
pretomanid
delamanid
fgd1 491679 c.897A>G synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fgd1 491685 c.903G>C synonymous_variant 0.72 clofazimine
pretomanid
delamanid
fgd1 491688 c.906A>G synonymous_variant 0.72 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fgd1 491697 c.915G>C synonymous_variant 0.74 clofazimine
pretomanid
delamanid
fgd1 491709 c.927A>G synonymous_variant 0.52 clofazimine
pretomanid
delamanid
fgd1 491712 c.930T>C synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fgd1 491718 c.936A>G synonymous_variant 0.43 clofazimine
pretomanid
delamanid
fgd1 491721 c.939A>C synonymous_variant 0.43 clofazimine
pretomanid
delamanid
fgd1 491724 c.942A>T synonymous_variant 0.42 clofazimine
pretomanid
delamanid
fgd1 491727 c.945T>C synonymous_variant 0.43 clofazimine
pretomanid
delamanid
fgd1 491742 c.960T>C synonymous_variant 1.0 clofazimine Not assoc w R
pretomanid
delamanid Not assoc w R - Interim
mshA 574616 c.-732G>C upstream_gene_variant 0.38 ethionamide
isoniazid
mshA 574622 c.-726C>T upstream_gene_variant 0.52 ethionamide
isoniazid
mshA 574629 c.-719G>A upstream_gene_variant 0.53 ethionamide
isoniazid
mshA 574637 c.-711C>G upstream_gene_variant 0.58 ethionamide
isoniazid
mshA 574640 c.-708G>C upstream_gene_variant 0.58 ethionamide
isoniazid
mshA 574647 c.-701C>T upstream_gene_variant 0.62 ethionamide
isoniazid
mshA 574650 c.-698A>C upstream_gene_variant 0.62 ethionamide
isoniazid
mshA 574664 c.-684G>C upstream_gene_variant 0.62 ethionamide
isoniazid
mshA 574670 c.-678C>G upstream_gene_variant 0.64 ethionamide
isoniazid
mshA 574673 c.-675A>C upstream_gene_variant 0.66 ethionamide
isoniazid
mshA 574674 c.-674_-672delCCGinsGC upstream_gene_variant 0.66 ethionamide
isoniazid
mshA 574680 c.-668_-666delTCGinsAC upstream_gene_variant 0.64 ethionamide
isoniazid
mshA 574688 c.-660G>C upstream_gene_variant 0.64 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 574718 c.-630A>G upstream_gene_variant 0.64 ethionamide
isoniazid
mshA 574721 c.-627C>G upstream_gene_variant 0.64 ethionamide
isoniazid
mshA 574739 c.-609T>C upstream_gene_variant 0.62 ethionamide
isoniazid
mshA 574742 c.-606G>A upstream_gene_variant 0.65 ethionamide
isoniazid
mshA 574752 c.-596_-594delTGCinsAT upstream_gene_variant 0.5 ethionamide
isoniazid
mshA 575713 c.366G>A synonymous_variant 0.55 ethionamide
isoniazid
mshA 575732 c.385_387delCTTinsTG frameshift_variant&missense_variant 0.66 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575737 c.390T>C synonymous_variant 0.64 ethionamide
isoniazid
mshA 575755 c.408G>A synonymous_variant 0.66 ethionamide
isoniazid
mshA 575767 c.420G>A synonymous_variant 0.67 ethionamide
isoniazid
mshA 575770 c.423G>C synonymous_variant 0.68 ethionamide
isoniazid
mshA 575772 p.Val142Ala missense_variant 0.69 ethionamide
isoniazid
mshA 575785 c.438T>C synonymous_variant 0.68 ethionamide
isoniazid
mshA 575812 c.465C>T synonymous_variant 0.73 ethionamide
isoniazid
mshA 575824 c.477T>G synonymous_variant 0.71 ethionamide
isoniazid
mshA 575842 c.495G>C synonymous_variant 0.73 ethionamide
isoniazid
mshA 575864 c.517T>C synonymous_variant 0.67 ethionamide
isoniazid
mshA 575872 c.525C>T synonymous_variant 0.69 ethionamide
isoniazid
mshA 575878 c.531A>G synonymous_variant 0.65 ethionamide
isoniazid
mshA 575890 c.543C>T synonymous_variant 0.66 ethionamide
isoniazid
mshA 575893 c.546C>G synonymous_variant 0.61 ethionamide
isoniazid
mshA 575896 c.549G>C synonymous_variant 0.62 ethionamide
isoniazid
mshA 575903 p.Ala186Ser missense_variant 0.63 ethionamide
isoniazid
mshA 575907 p.Ala187Val missense_variant 0.38 ethionamide Not assoc w R
isoniazid Not assoc w R
mshA 575920 c.573C>T synonymous_variant 0.62 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
mshA 575923 c.576C>T synonymous_variant 0.61 ethionamide
isoniazid
mshA 575925 p.Gly193Ala missense_variant 0.61 ethionamide
isoniazid
mshA 575935 c.588G>T synonymous_variant 0.59 ethionamide
isoniazid
mshA 575944 c.597T>C synonymous_variant 0.6 ethionamide
isoniazid
mshA 575945 c.598_600delACGinsTT frameshift_variant&missense_variant 0.6 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575953 c.606G>C synonymous_variant 0.62 ethionamide
isoniazid
mshA 575965 c.618C>T synonymous_variant 0.61 ethionamide
isoniazid
mshA 575977 c.630G>C synonymous_variant 0.43 ethionamide
isoniazid
mshA 575980 c.633T>C synonymous_variant 0.43 ethionamide
isoniazid
ccsA 619601 c.-290G>A upstream_gene_variant 0.38 capreomycin
amikacin
kanamycin
ccsA 619634 c.-257_-256delTCinsGT upstream_gene_variant 0.47 capreomycin
amikacin
kanamycin
ccsA 619648 c.-243C>G upstream_gene_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 619650 c.-241_-240delTCinsCG upstream_gene_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 619654 c.-237A>G upstream_gene_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 619669 c.-222G>C upstream_gene_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 619672 c.-219A>G upstream_gene_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 619696 c.-195C>A upstream_gene_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 619697 c.-194A>C upstream_gene_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 619702 c.-189C>G upstream_gene_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 619708 c.-183G>C upstream_gene_variant 0.57 capreomycin
amikacin
kanamycin
ccsA 620169 c.279G>C synonymous_variant 0.6 capreomycin
amikacin
kanamycin
ccsA 620173 p.Val95Ile missense_variant 0.65 capreomycin
amikacin
kanamycin
ccsA 620184 c.294C>T synonymous_variant 0.69 capreomycin
amikacin
kanamycin
ccsA 620197 p.Gln103Ala missense_variant 0.71 capreomycin
amikacin
kanamycin
ccsA 620247 p.Leu119Phe missense_variant 0.69 capreomycin
amikacin
kanamycin
ccsA 620249 p.Ser120Cys missense_variant 0.66 capreomycin
amikacin
kanamycin
ccsA 620253 c.363G>C synonymous_variant 0.64 capreomycin
amikacin
kanamycin
ccsA 620254 c.364_366delCTCinsTG frameshift_variant&missense_variant 0.64 capreomycin
amikacin
kanamycin
ccsA 620275 c.385C>T synonymous_variant 0.58 capreomycin
amikacin
kanamycin
ccsA 620283 c.393T>A synonymous_variant 0.58 capreomycin
amikacin
kanamycin
ccsA 620284 p.Ala132Pro missense_variant 0.58 capreomycin
amikacin
kanamycin
ccsA 620288 p.Arg133Gln missense_variant 0.58 capreomycin
amikacin
kanamycin
ccsA 620295 c.405G>C synonymous_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 620298 c.408G>A synonymous_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 620314 c.424C>T synonymous_variant 0.56 capreomycin
amikacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
ccsA 620317 c.427_429delGTCinsCG frameshift_variant&missense_variant 0.52 capreomycin
amikacin
kanamycin
ccsA 620337 c.447C>G synonymous_variant 0.39 capreomycin
amikacin
kanamycin
ccsA 620338 c.448_450delACCinsGG frameshift_variant&missense_variant 0.39 capreomycin
amikacin
kanamycin
ccsA 620351 p.Arg154His missense_variant 0.35 capreomycin
amikacin
kanamycin
ccsA 620358 c.468C>G synonymous_variant 0.34 capreomycin
amikacin
kanamycin
ccsA 620367 c.477T>C synonymous_variant 0.3 capreomycin
amikacin
kanamycin
ccsA 620604 c.714C>G synonymous_variant 0.54 capreomycin
amikacin
kanamycin
ccsA 620607 c.717T>C synonymous_variant 0.56 capreomycin
amikacin
kanamycin
ccsA 620625 p.Ile245Met missense_variant 0.45 capreomycin Not assoc w R
amikacin Not assoc w R
kanamycin Uncertain significance
ccsA 620631 c.741T>C synonymous_variant 0.52 capreomycin
amikacin
kanamycin
ccsA 620634 c.744C>A synonymous_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 620643 c.753C>T synonymous_variant 0.52 capreomycin
amikacin
kanamycin
ccsA 620661 c.771C>G synonymous_variant 0.47 capreomycin
amikacin
kanamycin
ccsA 620664 c.774C>T synonymous_variant 0.47 capreomycin
amikacin
kanamycin
ccsA 620676 c.786C>T synonymous_variant 0.49 capreomycin
amikacin
kanamycin
ccsA 620685 c.795G>A synonymous_variant 0.49 capreomycin Not assoc w R - Interim
amikacin
kanamycin Not assoc w R - Interim
ccsA 620692 p.Ser268Ala missense_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 620698 p.Val270Ile missense_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 620703 c.813G>C synonymous_variant 0.55 capreomycin
amikacin
kanamycin
ccsA 620718 c.828G>C synonymous_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 620721 c.831G>C synonymous_variant 0.5 capreomycin
amikacin
kanamycin
ccsA 620733 c.843G>C synonymous_variant 0.47 capreomycin
amikacin
kanamycin
ccsA 620734 c.844C>A synonymous_variant 0.49 capreomycin
amikacin
kanamycin
ccsA 620739 c.849A>G synonymous_variant 0.49 capreomycin
amikacin
kanamycin
ccsA 620748 c.858T>C synonymous_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 620758 c.868_870delCGCinsAG frameshift_variant&missense_variant 0.52 capreomycin
amikacin
kanamycin
ccsA 620763 c.873G>A synonymous_variant 0.52 capreomycin
amikacin
kanamycin
ccsA 620778 c.888T>C synonymous_variant 0.53 capreomycin
amikacin
kanamycin
ccsA 620781 c.891C>G synonymous_variant 0.59 capreomycin
amikacin
kanamycin
ccsA 620783 p.Ala298Val missense_variant 0.59 capreomycin
amikacin
kanamycin
ccsA 620790 c.900C>T synonymous_variant 0.62 capreomycin
amikacin
kanamycin
ccsA 620796 c.906C>G synonymous_variant 0.62 capreomycin
amikacin
kanamycin
ccsA 620802 c.912C>G synonymous_variant 0.62 capreomycin
amikacin
kanamycin
ccsA 620808 c.918T>C synonymous_variant 0.64 capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
ccsA 620814 c.924C>T synonymous_variant 0.75 capreomycin
amikacin Not assoc w R - Interim
kanamycin
ccsA 620820 c.930T>C synonymous_variant 0.75 capreomycin
amikacin
kanamycin
ccsA 620823 c.933C>T synonymous_variant 0.75 capreomycin
amikacin
kanamycin
ccsA 620847 c.957G>C synonymous_variant 0.65 capreomycin
amikacin
kanamycin
ccsA 620853 c.963G>C synonymous_variant 0.53 capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
kanamycin Not assoc w R - Interim
Rv0565c 656532 c.939C>A synonymous_variant 0.42 ethionamide
Rv0565c 656535 c.936C>A synonymous_variant 0.42 ethionamide
Rv0565c 656538 p.Ser311Glu missense_variant 0.4 ethionamide
Rv0565c 656542 p.Thr310Ser missense_variant 0.4 ethionamide
Rv0565c 656547 c.924C>G synonymous_variant 0.4 ethionamide
Rv0565c 656551 p.Asn307Val missense_variant 0.43 ethionamide
Rv0565c 656556 c.915G>C synonymous_variant 0.38 ethionamide Not assoc w R - Interim
Rv0565c 656568 c.903G>C synonymous_variant 0.4 ethionamide
Rv0565c 656571 c.900C>T synonymous_variant 0.42 ethionamide
Rv0565c 656577 c.894C>T synonymous_variant 0.42 ethionamide Not assoc w R - Interim
Rv0565c 656583 c.888A>G synonymous_variant 0.42 ethionamide
Rv0565c 656589 c.882T>C synonymous_variant 0.42 ethionamide
Rv0565c 656604 c.867G>C synonymous_variant 0.45 ethionamide
Rv0565c 656611 p.Thr287Lys missense_variant 0.45 ethionamide
Rv0565c 656922 p.Ile183Met missense_variant 0.36 ethionamide
Rv0565c 656943 c.528G>C synonymous_variant 0.36 ethionamide
Rv0565c 656946 c.525T>C synonymous_variant 0.38 ethionamide
Rv0565c 656952 c.519A>G synonymous_variant 0.38 ethionamide
Rv0565c 656964 c.507C>G synonymous_variant 0.4 ethionamide
Rv0565c 656973 c.498A>C synonymous_variant 0.44 ethionamide
Rv0565c 656976 c.493_495delGCGinsAC frameshift_variant&missense_variant 0.5 ethionamide Uncertain significance
Rv0565c 656985 c.486T>C synonymous_variant 0.53 ethionamide
Rv0565c 656990 p.Lys161Gln missense_variant 0.53 ethionamide
Rv0565c 656994 c.475_477delATCinsCT frameshift_variant&missense_variant 0.57 ethionamide Uncertain significance
Rv0565c 657000 p.Gly157Pro missense_variant 0.57 ethionamide
Rv0565c 657006 p.Asp155Glu missense_variant 0.57 ethionamide Uncertain significance
Rv0565c 657009 c.462C>G synonymous_variant 0.6 ethionamide
Rv0565c 657027 c.444T>C synonymous_variant 0.55 ethionamide
Rv0565c 657043 c.427_428delAGinsTC synonymous_variant 0.55 ethionamide
Rv0565c 657065 p.Ser136Gly missense_variant 0.5 ethionamide
Rv0565c 657073 p.His133Thr missense_variant 0.38 ethionamide
Rv0565c 657076 p.Lys132Thr missense_variant 0.4 ethionamide
Rv0565c 657078 p.His131Pro missense_variant 0.4 ethionamide
Rv0565c 657089 p.Asn128Asp missense_variant 0.38 ethionamide
Rv0565c 657097 p.Phe125Ala missense_variant 0.35 ethionamide
Rv0565c 657105 c.366C>G synonymous_variant 0.35 ethionamide
Rv0565c 657114 c.357T>C synonymous_variant 0.32 ethionamide Not assoc w R - Interim
Rv0565c 657123 c.348A>C synonymous_variant 0.33 ethionamide
Rv0565c 657135 c.336G>C synonymous_variant 0.3 ethionamide
Rv0565c 657138 c.331_333delGCAinsTG frameshift_variant&missense_variant 0.3 ethionamide Uncertain significance
Rv0565c 657142 p.Arg110His missense_variant 0.7 ethionamide Uncertain significance
Rv0565c 657144 c.327T>C synonymous_variant 0.32 ethionamide
Rv0565c 657147 c.324C>T synonymous_variant 0.32 ethionamide
Rv0565c 657291 c.180C>G synonymous_variant 0.59 ethionamide
Rv0565c 657318 c.153T>C synonymous_variant 0.62 ethionamide
Rv0565c 657336 p.Arg45Gln missense_variant 0.52 ethionamide Uncertain significance
Rv0565c 657340 p.Ala44Glu missense_variant 0.52 ethionamide
Rv0565c 657345 c.124_126delAGGinsCC frameshift_variant&missense_variant 0.5 ethionamide Uncertain significance
Rv0565c 657348 c.123A>G synonymous_variant 0.5 ethionamide
Rv0565c 657353 c.118C>T synonymous_variant 0.5 ethionamide
Rv0565c 657358 p.Thr38Val missense_variant 0.55 ethionamide
Rv0565c 657364 p.Thr36Ser missense_variant 0.55 ethionamide
Rv0565c 657369 c.100_102delCAGinsGT frameshift_variant&missense_variant 0.55 ethionamide Uncertain significance
Rv0565c 657385 p.Ile29Thr missense_variant 0.5 ethionamide
Rv0565c 657389 p.Ile28Leu missense_variant 0.48 ethionamide
Rv0565c 657408 c.63A>T synonymous_variant 0.5 ethionamide
Rv0565c 657414 c.57C>T synonymous_variant 0.48 ethionamide
Rv0565c 657417 c.54C>G synonymous_variant 0.43 ethionamide
Rv0565c 657572 c.-102A>G upstream_gene_variant 0.47 ethionamide
Rv0565c 657575 c.-105G>C upstream_gene_variant 0.47 ethionamide
Rv0565c 657578 c.-108T>C upstream_gene_variant 0.53 ethionamide
Rv0565c 657581 c.-111G>C upstream_gene_variant 0.53 ethionamide
Rv0565c 657592 c.-122A>G upstream_gene_variant 0.59 ethionamide
Rv0565c 657593 c.-123G>A upstream_gene_variant 0.59 ethionamide
Rv0565c 657629 c.-159G>A upstream_gene_variant 0.65 ethionamide
Rv0565c 657640 c.-170A>T upstream_gene_variant 0.61 ethionamide
Rv0565c 657641 c.-171C>G upstream_gene_variant 0.61 ethionamide
Rv0565c 657670 c.-200A>T upstream_gene_variant 0.7 ethionamide
Rv0565c 657671 c.-201A>G upstream_gene_variant 0.7 ethionamide
Rv0565c 657689 c.-220_-219delCAinsAG upstream_gene_variant 0.74 ethionamide
Rv0565c 657701 c.-231C>G upstream_gene_variant 0.8 ethionamide
Rv0565c 657732 c.-263_-262delAGinsTC upstream_gene_variant 0.73 ethionamide
hadA 731687 c.-243G>A upstream_gene_variant 0.66 isoniazid
hadA 731694 c.-236T>A upstream_gene_variant 0.59 isoniazid
hadA 731695 c.-235C>T upstream_gene_variant 0.56 isoniazid
hadA 731697 c.-233T>A upstream_gene_variant 0.56 isoniazid
hadA 731698 c.-232T>G upstream_gene_variant 0.59 isoniazid
hadA 731700 c.-230G>A upstream_gene_variant 0.58 isoniazid
hadA 731706 c.-224_-223insG upstream_gene_variant 0.61 isoniazid
hadA 731711 c.-219T>C upstream_gene_variant 0.61 isoniazid
hadA 731712 c.-218A>G upstream_gene_variant 0.61 isoniazid
hadA 731717 c.-213T>C upstream_gene_variant 0.67 isoniazid
hadA 731729 c.-201C>T upstream_gene_variant 0.66 isoniazid
hadA 731732 c.-198G>A upstream_gene_variant 0.66 isoniazid
hadA 731753 c.-177A>G upstream_gene_variant 0.69 isoniazid
hadA 731774 c.-156T>C upstream_gene_variant 0.54 isoniazid
hadA 731789 c.-141A>G upstream_gene_variant 0.5 isoniazid
hadA 731795 c.-135C>T upstream_gene_variant 0.47 isoniazid
hadA 731804 c.-126C>T upstream_gene_variant 0.42 isoniazid
hadA 731807 c.-123C>T upstream_gene_variant 0.39 isoniazid
hadA 731810 c.-120G>C upstream_gene_variant 0.39 isoniazid
hadA 731813 c.-117C>T upstream_gene_variant 0.39 isoniazid
hadA 731819 c.-111G>C upstream_gene_variant 0.4 isoniazid
hadA 731822 c.-108G>A upstream_gene_variant 0.4 isoniazid
nusG 734384 p.Ser44Thr missense_variant 0.5 rifampicin
nusG 734388 c.135G>A synonymous_variant 0.51 rifampicin Not assoc w R - Interim
nusG 734407 c.154_156delGTTinsAC frameshift_variant&missense_variant 0.57 rifampicin
nusG 734421 c.168A>C synonymous_variant 0.65 rifampicin
nusG 734424 c.171G>C synonymous_variant 0.63 rifampicin
nusG 734442 c.189G>A synonymous_variant 0.72 rifampicin
nusG 734451 c.198G>C synonymous_variant 0.74 rifampicin
nusG 734454 c.201A>G synonymous_variant 0.74 rifampicin
nusG 734460 c.207G>C synonymous_variant 0.75 rifampicin
nusG 734472 c.219T>C synonymous_variant 0.79 rifampicin
nusG 734475 c.222T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
nusG 734502 c.249G>A synonymous_variant 0.86 rifampicin
nusG 734526 c.273G>A synonymous_variant 0.83 rifampicin
nusG 734532 c.279A>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
nusG 734538 c.285C>T synonymous_variant 0.81 rifampicin Not assoc w R - Interim
nusG 734541 c.288A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
nusG 734556 c.303C>T synonymous_variant 0.8 rifampicin
nusG 734559 c.306T>C synonymous_variant 0.8 rifampicin
nusG 734571 c.318C>G synonymous_variant 0.79 rifampicin
nusG 734580 c.327T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
nusG 734586 c.333G>C synonymous_variant 0.78 rifampicin
nusG 734589 c.336G>C synonymous_variant 0.76 rifampicin
nusG 734610 c.357C>G synonymous_variant 0.66 rifampicin
nusG 734614 p.Ala121Ser missense_variant 0.66 rifampicin
nusG 734625 c.372T>C synonymous_variant 0.62 rifampicin
nusG 734631 c.378G>C synonymous_variant 0.55 rifampicin
nusG 734637 c.384G>T synonymous_variant 0.57 rifampicin
nusG 734814 c.561G>C synonymous_variant 0.64 rifampicin
nusG 734826 c.573A>C synonymous_variant 0.62 rifampicin
nusG 734829 c.576C>G synonymous_variant 0.61 rifampicin Not assoc w R - Interim
nusG 734832 c.579C>G synonymous_variant 0.6 rifampicin
nusG 734847 c.594T>C synonymous_variant 0.62 rifampicin
nusG 734853 c.600A>G synonymous_variant 0.65 rifampicin
nusG 734854 c.601T>C synonymous_variant 0.62 rifampicin
nusG 734859 c.606G>C synonymous_variant 0.61 rifampicin
nusG 734863 c.610_612delACGinsTC frameshift_variant&missense_variant 0.67 rifampicin
nusG 734889 c.636G>A synonymous_variant 0.71 rifampicin
nusG 734892 c.639G>A synonymous_variant 0.68 rifampicin
nusG 734895 c.642A>G synonymous_variant 0.71 rifampicin
nusG 734910 c.657C>G synonymous_variant 0.67 rifampicin
nusG 734922 c.669C>T synonymous_variant 0.67 rifampicin
nusG 734934 c.681G>T synonymous_variant 0.6 rifampicin Not assoc w R - Interim
nusG 734940 c.687G>A synonymous_variant 0.48 rifampicin
rpoB 759604 c.-203A>T upstream_gene_variant 0.62 rifampicin
rpoB 759606 c.-201T>C upstream_gene_variant 0.64 rifampicin
rpoB 759629 c.-178T>C upstream_gene_variant 0.73 rifampicin
rpoB 759643 c.-164T>C upstream_gene_variant 0.68 rifampicin
rpoB 759647 c.-160T>C upstream_gene_variant 0.65 rifampicin Uncertain significance
rpoB 759656 c.-151_-149delAGTinsG upstream_gene_variant 0.6 rifampicin
rpoB 759661 c.-146G>C upstream_gene_variant 0.6 rifampicin
rpoB 759672 c.-135G>A upstream_gene_variant 0.55 rifampicin
rpoB 759674 c.-133T>C upstream_gene_variant 0.55 rifampicin
rpoB 759678 c.-129T>C upstream_gene_variant 0.55 rifampicin
rpoB 759691 c.-116A>T upstream_gene_variant 0.57 rifampicin
rpoB 759693 c.-114C>T upstream_gene_variant 0.57 rifampicin
rpoB 759701 c.-106A>T upstream_gene_variant 0.55 rifampicin
rpoB 760070 c.264T>G synonymous_variant 0.37 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760101 c.295T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 760106 c.300G>C synonymous_variant 0.5 rifampicin
rpoB 760112 c.306T>C synonymous_variant 0.59 rifampicin
rpoB 760115 c.309C>T synonymous_variant 0.58 rifampicin Not assoc w R
rpoB 760118 c.312T>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 760121 c.315T>G synonymous_variant 0.63 rifampicin
rpoB 760130 p.Asp108Glu missense_variant 0.64 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 760181 c.375T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 760223 c.417T>C synonymous_variant 0.85 rifampicin
rpoB 760226 c.420G>A synonymous_variant 0.85 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 760253 c.447T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.77 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.77 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.78 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.78 rifampicin
rpoB 760340 c.534G>C synonymous_variant 0.79 rifampicin
rpoB 760361 c.555T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760376 p.Asp190Glu missense_variant 0.7 rifampicin Uncertain significance
rpoB 760382 c.576G>C synonymous_variant 0.68 rifampicin
rpoB 760388 c.582C>T synonymous_variant 0.64 rifampicin
rpoB 760389 c.583_585delAGCinsTCG synonymous_variant 0.66 rifampicin
rpoB 760418 c.612G>C synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760424 c.618C>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 760457 c.651C>G synonymous_variant 0.71 rifampicin
rpoB 760478 c.672C>T synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>T synonymous_variant 0.7 rifampicin
rpoB 760484 c.678A>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 760490 c.684C>G synonymous_variant 0.74 rifampicin
rpoB 760520 c.714C>G synonymous_variant 0.77 rifampicin
rpoB 760521 p.Ser239Ala missense_variant 0.78 rifampicin
rpoB 760532 c.726T>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 760533 p.Val243Thr missense_variant 0.78 rifampicin
rpoB 760547 c.741G>C synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 760563 p.Arg253Met missense_variant 0.88 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.86 rifampicin
rpoB 760611 c.805T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 760622 c.816C>T synonymous_variant 0.78 rifampicin
rpoB 760634 c.828T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 760649 c.843G>C synonymous_variant 0.74 rifampicin
rpoB 760655 c.849A>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.72 rifampicin
rpoB 760671 c.865C>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760674 c.868T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760724 c.918T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760730 c.924T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760796 c.990A>G synonymous_variant 0.37 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.58 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 0.67 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 0.7 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 760830 c.1024T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 760845 p.Thr347Pro missense_variant 0.77 rifampicin
rpoB 760859 c.1053T>C synonymous_variant 0.79 rifampicin
rpoB 760916 c.1110C>G synonymous_variant 0.82 rifampicin
rpoB 760919 c.1113C>G synonymous_variant 0.82 rifampicin
rpoB 760925 c.1119T>C synonymous_variant 0.82 rifampicin
rpoB 760934 c.1128C>T synonymous_variant 0.83 rifampicin
rpoB 760946 c.1140A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 760970 c.1164G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>C synonymous_variant 0.84 rifampicin
rpoB 761006 c.1200C>T synonymous_variant 0.85 rifampicin
rpoB 761015 c.1209G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761027 c.1221A>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761051 c.1245G>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761066 c.1260G>C synonymous_variant 0.85 rifampicin
rpoB 761096 c.1290G>C synonymous_variant 0.85 rifampicin
rpoB 761097 c.1291_1292delAGinsTC synonymous_variant 0.83 rifampicin
rpoB 761102 c.1296A>G synonymous_variant 0.82 rifampicin
rpoB 761132 c.1326G>T synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 761165 c.1359G>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 761168 c.1362C>G synonymous_variant 0.72 rifampicin
rpoB 761180 c.1374A>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 761217 c.1411_1413delCCGinsTC frameshift_variant&missense_variant 0.68 rifampicin
rpoB 761220 c.1414_1416delTCGinsAGC synonymous_variant 0.68 rifampicin
rpoB 761249 c.1443A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 761252 c.1446C>G synonymous_variant 0.69 rifampicin
rpoB 761255 c.1449T>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 761258 c.1452G>A synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 761264 c.1458C>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 761300 c.1494G>A synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 761318 c.1512G>T synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 761327 c.1521A>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761345 c.1539G>T synonymous_variant 0.52 rifampicin
rpoB 761346 p.Val514Arg missense_variant 0.5 rifampicin
rpoB 761353 p.Gly516Ala missense_variant 0.52 rifampicin
rpoB 761357 c.1551G>C synonymous_variant 0.52 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.55 rifampicin
rpoB 761374 p.Val523Glu missense_variant 0.55 rifampicin
rpoB 761384 c.1578C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 761396 c.1590G>A synonymous_variant 0.63 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoB 761423 c.1617T>C synonymous_variant 0.56 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.48 rifampicin
rpoB 761437 p.Ala544Asp missense_variant 0.48 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 0.48 rifampicin
rpoB 761447 c.1641C>G synonymous_variant 0.48 rifampicin
rpoB 761451 p.Val549Thr missense_variant 0.45 rifampicin
rpoB 761457 c.1651_1653delCCGinsGC frameshift_variant&missense_variant 0.45 rifampicin
rpoB 761462 c.1656C>G synonymous_variant 0.52 rifampicin
rpoB 761471 c.1665C>G synonymous_variant 0.63 rifampicin
rpoB 761482 p.Ala559Gly missense_variant 0.7 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.73 rifampicin
rpoB 761502 p.Pro566Ser missense_variant 0.79 rifampicin
rpoB 761508 c.1702_1704delTCTinsGC frameshift_variant&missense_variant 0.79 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761600 c.1794T>C synonymous_variant 0.86 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.84 rifampicin
rpoB 761612 c.1806G>T synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 761645 c.1839C>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 761648 c.1842T>C synonymous_variant 0.82 rifampicin
rpoB 761657 c.1851C>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761675 c.1869G>C synonymous_variant 0.84 rifampicin
rpoB 761690 c.1884G>C synonymous_variant 0.86 rifampicin
rpoB 761723 p.Glu639Asp missense_variant 0.86 rifampicin Not assoc w R
rpoB 761724 c.1918_1920delGAAinsAG frameshift_variant&missense_variant 0.87 rifampicin
rpoB 761735 c.1929C>A synonymous_variant 0.87 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.77 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.76 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.8 rifampicin
rpoB 761791 p.Arg662Gln missense_variant 0.73 rifampicin
rpoB 761819 c.2013G>A synonymous_variant 0.68 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.51 rifampicin
rpoB 761846 c.2040G>A synonymous_variant 0.41 rifampicin
rpoB 761847 c.2041_2043delTGCinsCT frameshift_variant&missense_variant 0.4 rifampicin
rpoB 761852 c.2046C>G synonymous_variant 0.39 rifampicin
rpoB 761855 p.Ile683Met missense_variant 0.38 rifampicin
rpoB 761858 c.2052G>C synonymous_variant 0.36 rifampicin
rpoB 761864 c.2058G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoB 761867 c.2061C>G synonymous_variant 0.36 rifampicin
rpoB 761868 c.2062_2064delGACinsCG frameshift_variant&missense_variant 0.36 rifampicin
rpoB 761873 c.2067A>G synonymous_variant 0.4 rifampicin
rpoB 761876 c.2070C>G synonymous_variant 0.42 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 0.49 rifampicin
rpoB 761891 c.2085G>C synonymous_variant 0.46 rifampicin
rpoB 761892 p.Ile696Val missense_variant 0.47 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.54 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.56 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.59 rifampicin
rpoB 761916 p.Asp704Asn missense_variant 0.59 rifampicin
rpoB 761954 c.2148C>G synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 761972 c.2166C>T synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 762011 c.2205G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 762017 c.2211A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 762029 c.2223C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 762056 c.2250G>A synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>T synonymous_variant 0.84 rifampicin
rpoB 762101 c.2295C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.85 rifampicin Uncertain significance
rpoB 762122 c.2316C>T synonymous_variant 0.84 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.83 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.81 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.8 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 762206 c.2400C>G synonymous_variant 0.83 rifampicin
rpoB 762209 c.2403C>T synonymous_variant 0.82 rifampicin
rpoB 762218 c.2412T>G synonymous_variant 0.83 rifampicin
rpoB 762233 c.2427G>T synonymous_variant 0.83 rifampicin
rpoB 762254 c.2448T>G synonymous_variant 0.82 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.81 rifampicin
rpoB 762266 c.2460T>C synonymous_variant 0.78 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 762296 c.2490G>A synonymous_variant 0.82 rifampicin
rpoB 762317 c.2511A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.86 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.85 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.87 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.88 rifampicin
rpoC 762380 c.-990T>G upstream_gene_variant 0.87 rifampicin
rpoC 762389 c.-981G>A upstream_gene_variant 0.86 rifampicin
rpoC 762395 c.-975G>C upstream_gene_variant 0.83 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.83 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.8 rifampicin
rpoB 762404 c.2598T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 762407 c.-963G>C upstream_gene_variant 0.81 rifampicin
rpoB 762410 c.2604T>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 762416 c.2610A>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 762488 c.2682G>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 762491 c.2685T>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 762509 c.-861T>G upstream_gene_variant 0.67 rifampicin
rpoB 762510 c.2704_2706delGCCinsCG frameshift_variant&missense_variant 0.67 rifampicin
rpoC 762521 c.-849C>G upstream_gene_variant 0.68 rifampicin
rpoC 762527 c.-843G>C upstream_gene_variant 0.68 rifampicin
rpoC 762533 c.-837T>C upstream_gene_variant 0.7 rifampicin
rpoC 762536 c.-834T>C upstream_gene_variant 0.69 rifampicin
rpoC 762537 c.-833T>C upstream_gene_variant 0.69 rifampicin
rpoC 762551 c.-819C>G upstream_gene_variant 0.74 rifampicin
rpoC 762581 c.-789T>C upstream_gene_variant 0.78 rifampicin
rpoC 762582 c.-788T>C upstream_gene_variant 0.76 rifampicin
rpoC 762587 c.-783G>A upstream_gene_variant 0.74 rifampicin
rpoB 762599 c.2793T>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 762605 c.-765T>C upstream_gene_variant 0.74 rifampicin
rpoC 762608 c.-762C>G upstream_gene_variant 0.7 rifampicin
rpoB 762631 p.Ala942Gly missense_variant 0.59 rifampicin
rpoB 762635 c.2829_2838delCAAGGGGGTTinsA conservative_inframe_deletion&synonymous_variant 0.58 rifampicin
rpoC 762659 c.-711C>G upstream_gene_variant 0.61 rifampicin
rpoC 762660 c.-710A>C upstream_gene_variant 0.61 rifampicin
rpoB 762663 c.2857C>T synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 762671 p.Asp955Glu missense_variant 0.66 rifampicin
rpoB 762678 c.2872_2874delCTCinsTG frameshift_variant&missense_variant 0.66 rifampicin
rpoC 762686 c.-684G>C upstream_gene_variant 0.66 rifampicin
rpoB 762687 p.Gln961Glu missense_variant 0.66 rifampicin
rpoB 762696 p.Ala964Lys missense_variant 0.68 rifampicin
rpoC 762701 c.-669T>C upstream_gene_variant 0.71 rifampicin
rpoC 762707 c.-663G>C upstream_gene_variant 0.76 rifampicin
rpoC 762734 c.-636G>A upstream_gene_variant 0.76 rifampicin
rpoB 762753 c.2947T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 762758 c.-612G>T upstream_gene_variant 0.79 rifampicin
rpoB 762760 p.Cys985Ser missense_variant 0.79 rifampicin Uncertain significance
rpoB 762785 p.Asp993Glu missense_variant 0.85 rifampicin Uncertain significance
rpoB 762795 p.Asp997Asn missense_variant 0.86 rifampicin Uncertain significance
rpoB 762799 p.Ala998Gly missense_variant 0.87 rifampicin Uncertain significance
rpoB 762812 c.3006C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 762813 p.Met1003Val missense_variant 0.86 rifampicin
rpoB 762818 c.3012C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 762827 c.3021G>C synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 762831 c.3025_3026delAGinsTC synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 762836 c.3030C>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoC 762863 c.-507T>G upstream_gene_variant 0.9 rifampicin
rpoB 762868 p.Tyr1021Phe missense_variant 0.86 rifampicin
rpoB 762923 c.3117C>G synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoB 762926 c.3120C>T synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>C synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoB 762995 c.3189G>T synonymous_variant 0.9 rifampicin Not assoc w R - Interim
rpoB 763028 c.3222T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 1.0 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoB 763082 c.3276C>T synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoB 763127 c.3321G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 763169 c.-201A>G upstream_gene_variant 0.86 rifampicin
rpoC 763179 c.-191C>T upstream_gene_variant 0.86 rifampicin
rpoC 763202 c.-168A>C upstream_gene_variant 0.8 rifampicin
rpoC 763205 c.-165G>C upstream_gene_variant 0.8 rifampicin
rpoC 763208 c.-162T>C upstream_gene_variant 0.81 rifampicin
rpoB 763214 c.3408T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 763217 c.-153G>C upstream_gene_variant 0.8 rifampicin
rpoC 763220 c.-150G>C upstream_gene_variant 0.82 rifampicin
rpoC 763226 c.-144A>G upstream_gene_variant 0.82 rifampicin
rpoB 763227 p.Leu1141Met missense_variant 0.82 rifampicin
rpoB 763235 p.Glu1143Asp missense_variant 0.8 rifampicin
rpoB 763238 c.3432T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 763241 p.Glu1145Asp missense_variant 0.75 rifampicin
rpoC 763259 c.-111G>C upstream_gene_variant 0.76 rifampicin
rpoC 763262 c.-108C>T upstream_gene_variant 0.75 rifampicin
rpoB 763268 c.3462C>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 763283 c.3477T>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 763373 c.4_6delCTCinsTA frameshift_variant&missense_variant 0.55 rifampicin
rpoC 763396 c.27A>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoC 763402 c.33C>G synonymous_variant 0.69 rifampicin
rpoC 763408 c.39T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 763411 c.42T>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 763414 c.45T>C synonymous_variant 0.7 rifampicin
rpoC 763420 c.51G>C synonymous_variant 0.72 rifampicin
rpoC 763430 c.61A>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 763435 c.66A>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 763444 c.75T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 763450 c.81G>A synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 763468 c.99G>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 763483 c.114G>C synonymous_variant 0.76 rifampicin
rpoC 763484 c.115_117delCTTinsTG frameshift_variant&missense_variant 0.76 rifampicin
rpoC 763528 c.159G>A synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 763603 c.234C>T synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 763609 c.240C>T synonymous_variant 0.79 rifampicin
rpoC 763621 c.252C>G synonymous_variant 0.78 rifampicin
rpoC 763633 c.264T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.79 rifampicin
rpoC 763660 c.291T>G synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 763669 c.300C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763672 c.303C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 763709 c.340C>T synonymous_variant 0.75 rifampicin
rpoC 763714 c.345G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763732 c.363C>G synonymous_variant 0.74 rifampicin
rpoC 763735 c.366G>C synonymous_variant 0.74 rifampicin
rpoC 763741 c.372C>T synonymous_variant 0.72 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.71 rifampicin
rpoC 763765 c.396T>C synonymous_variant 0.62 rifampicin
rpoC 763774 c.405G>C synonymous_variant 0.57 rifampicin
rpoC 763781 p.Ser138Gly missense_variant 0.45 rifampicin
rpoC 763792 p.Glu141Asp missense_variant 0.44 rifampicin
rpoC 763796 p.Met143Leu missense_variant 0.45 rifampicin
rpoC 763801 c.432C>G synonymous_variant 0.47 rifampicin
rpoC 763807 c.438T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763813 c.444C>G synonymous_variant 0.45 rifampicin
rpoC 763819 c.450G>C synonymous_variant 0.48 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 0.39 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 0.39 rifampicin
rpoC 763879 c.510A>G synonymous_variant 0.44 rifampicin
rpoC 763888 c.519G>C synonymous_variant 0.42 rifampicin
rpoC 763891 c.522G>C synonymous_variant 0.42 rifampicin
rpoC 763894 c.525A>G synonymous_variant 0.45 rifampicin
rpoC 763903 c.534G>A synonymous_variant 0.61 rifampicin
rpoC 763919 c.550C>T synonymous_variant 0.67 rifampicin
rpoC 763930 c.561G>A synonymous_variant 0.7 rifampicin
rpoC 763933 c.564C>G synonymous_variant 0.69 rifampicin
rpoC 763936 c.567C>G synonymous_variant 0.69 rifampicin
rpoC 763939 c.570G>A synonymous_variant 0.69 rifampicin
rpoC 763972 c.603C>T synonymous_variant 0.79 rifampicin
rpoC 763987 c.618C>T synonymous_variant 0.78 rifampicin
rpoC 763991 c.622_624delATCinsCG frameshift_variant&missense_variant 0.76 rifampicin
rpoC 763996 c.627T>C synonymous_variant 0.77 rifampicin
rpoC 764011 c.642T>C synonymous_variant 0.81 rifampicin
rpoC 764024 c.655_657delTTGinsCA frameshift_variant&missense_variant 0.81 rifampicin
rpoC 764032 p.Asp221Glu missense_variant 0.87 rifampicin
rpoC 764040 p.Ser224Thr missense_variant 0.85 rifampicin
rpoC 764044 c.675T>C synonymous_variant 0.84 rifampicin
rpoC 764059 c.690G>C synonymous_variant 0.83 rifampicin
rpoC 764083 c.714A>G synonymous_variant 0.82 rifampicin
rpoC 764098 c.729A>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.84 rifampicin
rpoC 764134 c.765C>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764188 c.819A>G synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoC 764203 c.834G>C synonymous_variant 0.86 rifampicin
rpoC 764206 c.837T>C synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764213 p.Arg282Lys missense_variant 0.84 rifampicin Uncertain significance
rpoC 764257 c.888G>C synonymous_variant 0.88 rifampicin
rpoC 764266 c.897T>C synonymous_variant 0.88 rifampicin
rpoC 764278 c.909A>G synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 764317 c.948C>G synonymous_variant 0.84 rifampicin
rpoC 764320 c.951C>G synonymous_variant 0.83 rifampicin
rpoC 764365 c.996C>T synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoC 764387 c.1018_1020delTTGinsCC frameshift_variant&missense_variant 0.86 rifampicin
rpoC 764405 c.1036_1038delAGGinsCC frameshift_variant&missense_variant 0.78 rifampicin
rpoC 764431 c.1062G>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.8 rifampicin
rpoC 764449 c.1080G>C synonymous_variant 0.8 rifampicin
rpoC 764452 c.1083T>C synonymous_variant 0.8 rifampicin
rpoC 764458 c.1089G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 764497 c.1128A>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.84 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.88 rifampicin
rpoC 764560 c.1191T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764578 c.1209C>G synonymous_variant 0.86 rifampicin
rpoC 764593 c.1224C>T synonymous_variant 0.87 rifampicin
rpoC 764605 c.1236G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764618 c.1249C>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764626 c.1257C>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>T synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 764671 c.1302G>A synonymous_variant 0.81 rifampicin
rpoC 764680 c.1311G>A synonymous_variant 0.81 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 764791 c.1422C>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 764803 c.1434C>T synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.84 rifampicin Not assoc w R
rpoC 764812 c.1443C>G synonymous_variant 0.84 rifampicin
rpoC 764815 c.1446A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 764875 c.1506C>G synonymous_variant 0.8 rifampicin
rpoC 764896 c.1527C>T synonymous_variant 0.79 rifampicin
rpoC 764902 c.1533C>T synonymous_variant 0.81 rifampicin
rpoC 764911 c.1542A>G synonymous_variant 0.8 rifampicin
rpoC 764923 c.1554A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764932 c.1563C>G synonymous_variant 0.82 rifampicin
rpoC 764948 c.1579T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 764995 c.1626C>G synonymous_variant 0.81 rifampicin Not assoc w R
rpoC 765007 c.1638T>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 765008 c.1639T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 765019 c.1650A>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 765034 c.1665T>C synonymous_variant 0.83 rifampicin
rpoC 765040 c.1671T>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 765052 c.1683C>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 765055 c.1686C>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 765065 c.1696C>T synonymous_variant 0.79 rifampicin
rpoC 765076 c.1707A>G synonymous_variant 0.74 rifampicin
rpoC 765079 c.1710T>G synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 765082 c.1713G>T synonymous_variant 0.75 rifampicin
rpoC 765089 c.1720T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 765142 c.1773G>A synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 765247 c.1878C>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 765277 c.1908G>A synonymous_variant 0.58 rifampicin
rpoC 765281 p.Thr638Glu missense_variant 0.56 rifampicin
rpoC 765292 c.1923G>T synonymous_variant 0.59 rifampicin
rpoC 765298 c.1929G>C synonymous_variant 0.56 rifampicin
rpoC 765300 p.Val644Ala missense_variant 0.56 rifampicin Uncertain significance
rpoC 765305 p.Ile646Val missense_variant 0.56 rifampicin Uncertain significance
rpoC 765317 c.1948_1950delCTAinsTG frameshift_variant&stop_gained 0.55 rifampicin
rpoC 765325 c.1956_1957insG frameshift_variant 0.55 rifampicin
rpoC 765329 c.1961delG frameshift_variant 0.57 rifampicin
rpoC 765334 c.1965C>T synonymous_variant 0.61 rifampicin
rpoC 765343 c.1974G>A synonymous_variant 0.67 rifampicin
rpoC 765346 c.1977C>T synonymous_variant 0.72 rifampicin
rpoC 765352 c.1983G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 765358 p.Met663Ile missense_variant 0.72 rifampicin Uncertain significance
rpoC 765364 c.1995G>A synonymous_variant 0.72 rifampicin
rpoC 765403 c.2034G>C synonymous_variant 0.75 rifampicin
rpoC 765404 p.Leu679Thr missense_variant 0.75 rifampicin Uncertain significance
rpoC 765409 c.2040T>C synonymous_variant 0.77 rifampicin
rpoC 765412 c.2043T>C synonymous_variant 0.78 rifampicin
rpoC 765421 c.2052C>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 765454 c.2085C>G synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 765466 c.2097C>T synonymous_variant 0.85 rifampicin
rpoC 765478 c.2109T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoC 765493 c.2124G>C synonymous_variant 0.87 rifampicin
rpoC 765502 c.2133G>A synonymous_variant 0.85 rifampicin
rpoC 765529 c.2160C>T synonymous_variant 0.85 rifampicin
rpoC 765547 c.2178C>A synonymous_variant 0.84 rifampicin
rpoC 765553 c.2184C>T synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.82 rifampicin
rpoC 765562 c.2193G>C synonymous_variant 0.79 rifampicin
rpoC 765565 c.2196G>C synonymous_variant 0.79 rifampicin
rpoC 765578 c.2209C>T synonymous_variant 0.82 rifampicin
rpoC 765583 c.2214G>T synonymous_variant 0.82 rifampicin
rpoC 765592 c.2223C>T synonymous_variant 0.8 rifampicin
rpoC 765596 p.Lys743Gln missense_variant 0.81 rifampicin
rpoC 765611 p.His748Ser missense_variant 0.76 rifampicin Uncertain significance
rpoC 765628 c.2259G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 765700 c.2331T>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 765734 c.2365T>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 765772 c.2403C>G synonymous_variant 0.76 rifampicin
rpoC 765787 c.2418C>T synonymous_variant 0.75 rifampicin
rpoC 765790 c.2421C>G synonymous_variant 0.74 rifampicin
rpoC 765793 c.2424C>G synonymous_variant 0.74 rifampicin
rpoC 765796 c.2427C>T synonymous_variant 0.76 rifampicin
rpoC 765811 c.2442T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 765814 c.2445A>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 765826 c.2457T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 765865 c.2496C>T synonymous_variant 0.71 rifampicin
rpoC 765871 c.2502T>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 765875 p.Val836Ile missense_variant 0.7 rifampicin Uncertain significance
rpoC 765883 c.2514C>G synonymous_variant 0.7 rifampicin
rpoC 765886 c.2517C>G synonymous_variant 0.69 rifampicin
rpoC 765904 c.2535C>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 765908 c.2539C>T synonymous_variant 0.69 rifampicin
rpoC 765937 c.2568T>G synonymous_variant 0.65 rifampicin
rpoC 765967 c.2598C>T synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 765973 c.2604C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 765979 c.2610C>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>G synonymous_variant 0.64 rifampicin
rpoC 765985 c.2616C>T synonymous_variant 0.62 rifampicin
rpoC 765994 c.2625A>T synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 766009 c.2640G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.53 rifampicin
rpoC 766021 c.2652G>C synonymous_variant 0.51 rifampicin
rpoC 766034 p.His889Ala missense_variant 0.47 rifampicin
rpoC 766043 p.Gln892Gly missense_variant 0.49 rifampicin
rpoC 766057 c.2688C>T synonymous_variant 0.5 rifampicin
rpoC 766061 p.Val898Thr missense_variant 0.5 rifampicin
rpoC 766082 p.Ala905Gln missense_variant 0.5 rifampicin
rpoC 766243 c.2874C>G synonymous_variant 0.35 rifampicin
rpoC 766249 c.2880C>G synonymous_variant 0.5 rifampicin
rpoC 766258 c.2889T>G synonymous_variant 0.5 rifampicin
rpoC 766264 c.2895G>A synonymous_variant 0.49 rifampicin
rpoC 766270 c.2901G>C synonymous_variant 0.49 rifampicin
rpoC 766273 c.2904T>C synonymous_variant 0.52 rifampicin
rpoC 766276 c.2907C>G synonymous_variant 0.53 rifampicin
rpoC 766280 p.Ser971Gly missense_variant 0.6 rifampicin
rpoC 766288 c.2919C>A synonymous_variant 0.68 rifampicin
rpoC 766303 c.2934C>T synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 766315 c.2946C>G synonymous_variant 0.78 rifampicin
rpoC 766321 c.2952C>G synonymous_variant 0.8 rifampicin
rpoC 766348 c.2979A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.83 rifampicin
rpoC 766360 c.2991C>T synonymous_variant 0.84 rifampicin
rpoC 766363 c.2994G>C synonymous_variant 0.84 rifampicin
rpoC 766366 c.2997C>G synonymous_variant 0.86 rifampicin
rpoC 766384 c.3015A>G synonymous_variant 0.88 rifampicin
rpoC 766390 c.3021C>T synonymous_variant 0.87 rifampicin
rpoC 766426 c.3057C>T synonymous_variant 0.88 rifampicin
rpoC 766459 c.3090G>A synonymous_variant 0.86 rifampicin
rpoC 766471 c.3102G>C synonymous_variant 0.9 rifampicin
rpoC 766486 c.3117A>G synonymous_variant 0.89 rifampicin
rpoC 766492 c.3123T>C synonymous_variant 0.9 rifampicin
rpoC 766495 c.3126C>G synonymous_variant 0.9 rifampicin
rpoC 766519 c.3150C>T synonymous_variant 0.9 rifampicin
rpoC 766522 c.3153C>A synonymous_variant 0.9 rifampicin
rpoC 766540 p.Asp1057Glu missense_variant 0.88 rifampicin
rpoC 766543 c.3174C>T synonymous_variant 0.86 rifampicin
rpoC 766549 c.3180G>C synonymous_variant 0.88 rifampicin
rpoC 766570 c.3201T>C synonymous_variant 0.91 rifampicin
rpoC 766573 c.3204T>G synonymous_variant 0.9 rifampicin Not assoc w R - Interim
rpoC 766582 c.3213C>T synonymous_variant 0.91 rifampicin Not assoc w R - Interim
rpoC 766585 c.3216T>C synonymous_variant 0.92 rifampicin
rpoC 766607 p.Ile1080Leu missense_variant 0.93 rifampicin
rpoC 766618 c.3249G>T synonymous_variant 0.92 rifampicin
rpoC 766645 c.3276A>G synonymous_variant 0.9 rifampicin
rpoC 766651 c.3282T>C synonymous_variant 0.89 rifampicin
rpoC 766652 p.Ser1095Thr missense_variant 0.9 rifampicin
rpoC 766657 c.3288A>G synonymous_variant 0.87 rifampicin
rpoC 766660 c.3291G>A synonymous_variant 0.86 rifampicin
rpoC 766661 p.Val1098Leu missense_variant 0.86 rifampicin
rpoC 766667 p.Ser1100Ala missense_variant 0.83 rifampicin Uncertain significance
rpoC 766672 c.3303T>C synonymous_variant 0.83 rifampicin
rpoC 766690 c.3321G>C synonymous_variant 0.83 rifampicin
rpoC 766693 c.3324C>T synonymous_variant 0.83 rifampicin
rpoC 766700 c.3331C>T synonymous_variant 0.84 rifampicin
rpoC 766708 c.3339A>G synonymous_variant 0.84 rifampicin
rpoC 766714 c.3345G>C synonymous_variant 0.84 rifampicin
rpoC 766726 c.3357T>C synonymous_variant 0.84 rifampicin
rpoC 766738 c.3369G>C synonymous_variant 0.81 rifampicin
rpoC 766750 c.3381C>G synonymous_variant 0.82 rifampicin
rpoC 766756 c.3387G>A synonymous_variant 0.79 rifampicin
rpoC 766765 c.3396A>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 766798 c.3429C>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 766801 c.3432C>G synonymous_variant 0.76 rifampicin
rpoC 766804 c.3435A>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 766843 c.3474T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 766846 c.3477C>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 766885 c.3516G>A synonymous_variant 0.73 rifampicin
rpoC 766891 c.3522G>A synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 766894 c.3525T>C synonymous_variant 0.76 rifampicin
rpoC 766895 c.3526T>C synonymous_variant 0.75 rifampicin
rpoC 766900 c.3531T>C synonymous_variant 0.76 rifampicin
rpoC 766918 c.3549C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 766921 c.3552G>A synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 766933 c.3564A>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 766942 c.3573C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 766945 c.3576A>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.79 rifampicin
rpoC 766978 c.3609C>T synonymous_variant 0.82 rifampicin
rpoC 766981 c.3612T>C synonymous_variant 0.81 rifampicin
rpoC 766988 c.3619_3621delCTGinsTA frameshift_variant&stop_gained 0.84 rifampicin
rpoC 766996 c.3627C>T synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoC 767002 c.3633G>C synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoC 767023 c.3654C>T synonymous_variant 0.91 rifampicin Not assoc w R - Interim
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.92 rifampicin
rpoC 767059 c.3690T>G synonymous_variant 0.92 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>G synonymous_variant 0.91 rifampicin
rpoC 767098 c.3729T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 767099 p.Lys1244Arg missense_variant 0.84 rifampicin
rpoC 767119 c.3750A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 767155 c.3786C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 767158 c.3789T>G synonymous_variant 0.79 rifampicin
rpoC 767180 p.Ala1271Gln missense_variant 0.76 rifampicin
rpoC 767185 c.3816G>A synonymous_variant 0.74 rifampicin
rpoC 767191 c.3822C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 767203 c.3834C>T synonymous_variant 0.7 rifampicin
rpoC 767206 c.3837C>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 767209 c.3840T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 767212 c.3843G>C synonymous_variant 0.7 rifampicin
rpoC 767221 c.3852C>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 767230 c.3861G>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 767233 c.3864T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 767257 c.3888C>T synonymous_variant 0.65 rifampicin
rpoC 767263 c.3894T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 767266 c.3897G>C synonymous_variant 0.65 rifampicin
rpoC 767272 c.3903C>T synonymous_variant 0.63 rifampicin
rpoC 767275 c.3906T>G synonymous_variant 0.62 rifampicin
rpoC 767278 c.3909T>C synonymous_variant 0.65 rifampicin
rpoC 767281 c.3912C>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 clofazimine Not assoc w R
bedaquiline Not assoc w R - Interim
mmpL5 775904 c.2577G>A synonymous_variant 0.46 clofazimine
bedaquiline
mmpL5 775909 p.Leu858Phe missense_variant 0.5 clofazimine
bedaquiline
mmpL5 775913 c.2568C>G synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775916 c.2565T>G synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775939 p.Ala848Ser missense_variant 0.5 clofazimine
bedaquiline
mmpL5 775940 c.2541C>G synonymous_variant 0.5 clofazimine
bedaquiline
mmpL5 775943 c.2538C>G synonymous_variant 0.46 clofazimine
bedaquiline
mmpL5 775946 c.2535C>G synonymous_variant 0.46 clofazimine
bedaquiline
mmpL5 775951 c.2530C>T synonymous_variant 0.46 clofazimine
bedaquiline
mmpL5 776182 p.Asp767Asn missense_variant 1.0 clofazimine Not assoc w R
bedaquiline Not assoc w R
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0 clofazimine
bedaquiline
rpsL 781134 c.-426T>C upstream_gene_variant 0.6 streptomycin
rpsL 781143 c.-417T>C upstream_gene_variant 0.57 streptomycin
rpsL 781156 c.-404_-402delCTCinsTG upstream_gene_variant 0.5 streptomycin
rpsL 781161 c.-399G>A upstream_gene_variant 0.46 streptomycin
rpsL 781164 c.-396T>C upstream_gene_variant 0.49 streptomycin
rpsL 781174 c.-386C>T upstream_gene_variant 0.5 streptomycin
rpsL 781179 c.-381T>C upstream_gene_variant 0.51 streptomycin
rpsL 781182 c.-378G>T upstream_gene_variant 0.46 streptomycin
rpsL 781185 c.-375T>C upstream_gene_variant 0.51 streptomycin
rpsL 781194 c.-366G>C upstream_gene_variant 0.51 streptomycin
rpsL 781224 c.-336T>C upstream_gene_variant 0.56 streptomycin
rpsL 781230 c.-330T>C upstream_gene_variant 0.51 streptomycin
rpsL 781232 c.-328C>T upstream_gene_variant 0.5 streptomycin
rpsL 781236 c.-324G>T upstream_gene_variant 0.52 streptomycin
rpsL 781239 c.-321C>T upstream_gene_variant 0.5 streptomycin
rpsL 781240 c.-320A>T upstream_gene_variant 0.49 streptomycin
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781571 c.12C>T synonymous_variant 0.36 streptomycin
rpsL 781592 c.33T>G synonymous_variant 0.4 streptomycin
rpsL 781595 c.36T>C synonymous_variant 0.43 streptomycin
rpsL 781598 c.39G>C synonymous_variant 0.41 streptomycin
rpsL 781605 p.Ile16Leu missense_variant 0.44 streptomycin
rpsL 781608 c.49_51delAGTinsGC frameshift_variant&missense_variant 0.44 streptomycin Uncertain significance
rpsL 781628 c.69T>C synonymous_variant 0.63 streptomycin Not assoc w R - Interim
rpsL 781631 c.72G>C synonymous_variant 0.61 streptomycin
rpsL 781649 c.90T>C synonymous_variant 0.74 streptomycin
rpsL 781652 c.93T>C synonymous_variant 0.75 streptomycin
rpsL 781655 c.96T>C synonymous_variant 0.76 streptomycin
rpsL 781658 c.99A>G synonymous_variant 0.74 streptomycin
rpsL 781664 c.105C>G synonymous_variant 0.76 streptomycin
rpsL 781679 c.120C>G synonymous_variant 0.8 streptomycin
rpsL 781682 c.123T>C synonymous_variant 0.79 streptomycin
rpsL 781715 c.156T>G synonymous_variant 0.82 streptomycin
rpsL 781718 c.159C>G synonymous_variant 0.82 streptomycin
rpsL 781721 c.162C>T synonymous_variant 0.82 streptomycin
rpsL 781724 c.165G>C synonymous_variant 0.82 streptomycin
rpsL 781728 c.169T>C synonymous_variant 0.82 streptomycin
rpsL 781733 c.174G>C synonymous_variant 0.82 streptomycin
rpsL 781736 c.177T>C synonymous_variant 0.82 streptomycin
rpsL 781742 c.183C>T synonymous_variant 0.84 streptomycin
rpsL 781754 c.195G>C synonymous_variant 0.86 streptomycin
rpsL 781760 c.201T>C synonymous_variant 0.87 streptomycin
rpsL 781769 c.210G>A synonymous_variant 0.86 streptomycin
rpsL 781778 c.219C>T synonymous_variant 0.87 streptomycin
rpsL 781808 c.249C>T synonymous_variant 0.88 streptomycin
rpsL 781832 c.273T>G synonymous_variant 0.87 streptomycin
rpsL 781859 c.300T>C synonymous_variant 0.86 streptomycin Not assoc w R - Interim
rpsL 781868 c.309T>C synonymous_variant 0.87 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.87 streptomycin
rpsL 781877 c.318T>C synonymous_variant 0.88 streptomycin
rpsL 781892 c.333A>G synonymous_variant 0.85 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.84 streptomycin
rpsL 781916 c.357T>C synonymous_variant 0.84 streptomycin
rplC 800516 c.-293G>C upstream_gene_variant 0.59 linezolid
rplC 800531 c.-278T>C upstream_gene_variant 0.65 linezolid
rplC 800546 c.-263T>C upstream_gene_variant 0.68 linezolid
rplC 800558 c.-251G>A upstream_gene_variant 0.69 linezolid
rplC 800567 c.-242A>G upstream_gene_variant 0.69 linezolid
rplC 800570 c.-239C>G upstream_gene_variant 0.7 linezolid
rplC 800579 c.-230C>G upstream_gene_variant 0.71 linezolid
rplC 800585 c.-224T>C upstream_gene_variant 0.73 linezolid
rplC 800594 c.-215C>G upstream_gene_variant 0.71 linezolid
rplC 800597 c.-212A>G upstream_gene_variant 0.72 linezolid
rplC 800600 c.-209G>T upstream_gene_variant 0.73 linezolid
rplC 800612 c.-197A>G upstream_gene_variant 0.72 linezolid
rplC 800618 c.-191T>C upstream_gene_variant 0.71 linezolid
rplC 800642 c.-167C>T upstream_gene_variant 0.75 linezolid
rplC 800648 c.-161A>T upstream_gene_variant 0.77 linezolid
rplC 800654 c.-155T>C upstream_gene_variant 0.77 linezolid
rplC 800657 c.-152G>A upstream_gene_variant 0.77 linezolid
rplC 800684 c.-125G>A upstream_gene_variant 0.7 linezolid
rplC 800693 c.-116A>G upstream_gene_variant 0.67 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 0.61 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 0.6 linezolid
rplC 800744 c.-65G>C upstream_gene_variant 0.6 linezolid
rplC 800745 c.-64_-62delCTCinsTG upstream_gene_variant 0.6 linezolid
rplC 800753 c.-56C>T upstream_gene_variant 0.64 linezolid
rplC 800759 c.-50C>T upstream_gene_variant 0.64 linezolid
rplC 800762 c.-47T>G upstream_gene_variant 0.64 linezolid
rplC 800798 c.-11_-8delTGGAinsC upstream_gene_variant 0.4 linezolid
rplC 800806 c.-3G>A upstream_gene_variant 0.4 linezolid
rplC 800814 c.6A>G synonymous_variant 0.38 linezolid
rplC 800815 c.7C>A synonymous_variant 0.38 linezolid
rplC 800819 p.Lys4Arg missense_variant 0.36 linezolid
rplC 800829 c.21C>G synonymous_variant 0.38 linezolid
rplC 800832 c.24T>C synonymous_variant 0.38 linezolid
rplC 800844 c.36T>C synonymous_variant 0.43 linezolid
rplC 800856 c.48A>G synonymous_variant 0.48 linezolid
rplC 800865 p.Glu19Asp missense_variant 0.44 linezolid
rplC 800867 p.Ser20Asn missense_variant 0.44 linezolid
rplC 800872 c.64A>C synonymous_variant 0.48 linezolid
rplC 800877 c.69A>T synonymous_variant 0.46 linezolid
rplC 800880 c.72A>T synonymous_variant 0.46 linezolid
rplC 800889 c.81C>G synonymous_variant 0.48 linezolid
rplC 800898 c.90G>A synonymous_variant 0.52 linezolid
rplC 800916 c.108A>G synonymous_variant 0.41 linezolid
rplC 800919 c.111C>T synonymous_variant 0.41 linezolid
rplC 800922 c.114C>A synonymous_variant 0.41 linezolid
rplC 800931 c.123G>A synonymous_variant 0.43 linezolid
rplC 800934 c.126C>G synonymous_variant 0.43 linezolid
rplC 800937 c.129A>G synonymous_variant 0.43 linezolid
rplC 800940 c.132C>T synonymous_variant 0.43 linezolid
rplC 800946 c.138T>C synonymous_variant 0.39 linezolid
rplC 800949 c.141T>C synonymous_variant 0.38 linezolid
rplC 800955 c.147C>A synonymous_variant 0.39 linezolid
rplC 800962 c.154C>T synonymous_variant 0.4 linezolid
rplC 800970 c.162T>C synonymous_variant 0.43 linezolid Not assoc w R - Interim
rplC 800976 c.168G>A synonymous_variant 0.44 linezolid
rplC 800982 c.174C>T synonymous_variant 0.43 linezolid
rplC 800985 c.177A>T synonymous_variant 0.43 linezolid
rplC 800988 c.180C>G synonymous_variant 0.45 linezolid
rplC 801153 c.345G>C synonymous_variant 0.38 linezolid
rplC 801156 c.348T>C synonymous_variant 0.43 linezolid
rplC 801174 c.366T>C synonymous_variant 0.62 linezolid
rplC 801177 c.369C>T synonymous_variant 0.62 linezolid
rplC 801183 c.375C>A synonymous_variant 0.62 linezolid
rplC 801186 c.378C>T synonymous_variant 0.59 linezolid
rplC 801201 c.393C>T synonymous_variant 0.64 linezolid
rplC 801210 c.402T>G synonymous_variant 0.68 linezolid Not assoc w R - Interim
rplC 801222 c.414T>C synonymous_variant 0.68 linezolid
rplC 801228 c.420T>C synonymous_variant 0.68 linezolid
rplC 801231 c.423C>T synonymous_variant 0.67 linezolid
rplC 801249 c.441T>G synonymous_variant 0.74 linezolid
rplC 801255 c.447C>T synonymous_variant 0.76 linezolid
rplC 801267 c.459A>T synonymous_variant 0.76 linezolid
rplC 801270 c.462T>C synonymous_variant 0.76 linezolid
rplC 801321 c.513C>T synonymous_variant 0.71 linezolid Not assoc w R - Interim
rplC 801324 c.516T>C synonymous_variant 0.7 linezolid
rplC 801327 c.519C>T synonymous_variant 0.69 linezolid
rplC 801337 p.Val177Thr missense_variant 0.69 linezolid
rplC 801341 p.Leu178Gln missense_variant 0.69 linezolid
rplC 801348 c.540T>G synonymous_variant 0.73 linezolid
rplC 801357 c.549T>C synonymous_variant 0.75 linezolid
rplC 801369 c.561C>T synonymous_variant 0.74 linezolid
rplC 801393 c.585G>A synonymous_variant 0.64 linezolid
rplC 801402 c.594T>C synonymous_variant 0.64 linezolid
rplC 801413 p.Thr202Asn missense_variant 0.55 linezolid
rplC 801423 c.615G>C synonymous_variant 0.57 linezolid
rplC 801427 p.Met207Val missense_variant 0.51 linezolid
rplC 801432 c.624C>T synonymous_variant 0.43 linezolid
rplC 801438 c.630T>C synonymous_variant 0.36 linezolid
Rv1129c 1254562 c.-28T>C upstream_gene_variant 1.0 moxifloxacin Not assoc w R
levofloxacin Not assoc w R
rifampicin Not assoc w R
isoniazid Not assoc w R
fbiC 1303441 c.511T>C synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1303455 c.525C>G synonymous_variant 0.79 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1303464 c.534A>G synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fbiC 1303470 c.540T>G synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fbiC 1303474 c.544C>T synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1303480 p.Gln184Glu missense_variant 0.74 clofazimine
pretomanid
delamanid
fbiC 1303485 c.555C>T synonymous_variant 0.75 clofazimine
pretomanid
delamanid
fbiC 1303488 c.558G>A synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1303492 c.562T>C synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1303501 c.571C>T synonymous_variant 0.81 clofazimine
pretomanid
delamanid
fbiC 1303509 c.579G>C synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fbiC 1303512 c.582T>C synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fbiC 1303515 c.585G>C synonymous_variant 0.82 clofazimine
pretomanid
delamanid
fbiC 1303531 p.Met201Leu missense_variant 0.84 clofazimine
pretomanid
delamanid
fbiC 1303536 c.606G>C synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fbiC 1303539 c.609G>A synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fbiC 1303542 c.612C>G synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fbiC 1303545 c.615A>G synonymous_variant 0.83 clofazimine
pretomanid
delamanid
fbiC 1303584 c.654C>G synonymous_variant 0.85 clofazimine
pretomanid
delamanid
fbiC 1303590 c.660A>G synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fbiC 1303606 p.Lys226Arg missense_variant 0.8 clofazimine
pretomanid
delamanid
fbiC 1303614 c.684C>G synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fbiC 1303617 c.687C>G synonymous_variant 0.81 clofazimine
pretomanid
delamanid
fbiC 1303620 c.690C>T synonymous_variant 0.8 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1303632 c.702T>G synonymous_variant 0.8 clofazimine
pretomanid
delamanid
fbiC 1303641 c.711C>T synonymous_variant 0.8 clofazimine
pretomanid
delamanid
fbiC 1303650 c.720G>C synonymous_variant 0.74 clofazimine
pretomanid
delamanid
fbiC 1303662 c.732C>G synonymous_variant 0.41 clofazimine
pretomanid
delamanid
fbiC 1303663 c.733C>T synonymous_variant 0.55 clofazimine
pretomanid
delamanid
fbiC 1303681 c.751T>C synonymous_variant 0.79 clofazimine
pretomanid
delamanid
fbiC 1303686 c.756C>G synonymous_variant 0.84 clofazimine
pretomanid
delamanid
fbiC 1303695 c.765T>C synonymous_variant 0.8 clofazimine
pretomanid
delamanid
fbiC 1303701 c.771C>A synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fbiC 1303708 c.778T>C synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fbiC 1303713 c.783C>G synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1303722 c.792C>G synonymous_variant 0.72 clofazimine
pretomanid
delamanid
fbiC 1303737 c.807G>A synonymous_variant 0.66 clofazimine
pretomanid
delamanid
fbiC 1303746 c.816T>C synonymous_variant 0.63 clofazimine
pretomanid
delamanid
fbiC 1303749 c.819G>C synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1303752 c.822A>G synonymous_variant 0.63 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1303761 c.831T>C synonymous_variant 0.63 clofazimine
pretomanid
delamanid
fbiC 1303791 c.861C>T synonymous_variant 0.53 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1303794 c.864A>G synonymous_variant 0.53 clofazimine
pretomanid
delamanid
fbiC 1303818 c.888C>G synonymous_variant 0.58 clofazimine
pretomanid
delamanid
fbiC 1303998 c.1068T>C synonymous_variant 0.52 clofazimine
pretomanid
delamanid
fbiC 1304004 c.1074A>C synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1304008 c.1078T>C synonymous_variant 0.64 clofazimine
pretomanid
delamanid
fbiC 1304013 c.1083G>C synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1304022 c.1092T>C synonymous_variant 0.69 clofazimine
pretomanid
delamanid
fbiC 1304031 c.1101C>G synonymous_variant 0.72 clofazimine
pretomanid
delamanid
fbiC 1304034 c.1104A>G synonymous_variant 0.74 clofazimine
pretomanid
delamanid
fbiC 1304040 c.1110C>G synonymous_variant 0.73 clofazimine
pretomanid
delamanid
fbiC 1304050 c.1120T>C synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1304061 c.1131G>C synonymous_variant 0.76 clofazimine
pretomanid
delamanid
fbiC 1304064 c.1134G>C synonymous_variant 0.77 clofazimine
pretomanid
delamanid
fbiC 1304085 c.1155C>T synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1304088 c.1158C>T synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1304092 p.Met388Leu missense_variant 0.73 clofazimine
pretomanid
delamanid
fbiC 1304098 p.Gln390Glu missense_variant 0.72 clofazimine
pretomanid
delamanid
fbiC 1304115 c.1185A>G synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1304124 c.1194C>T synonymous_variant 0.54 clofazimine
pretomanid
delamanid
fbiC 1304127 c.1197A>G synonymous_variant 0.5 clofazimine
pretomanid
delamanid
fbiC 1304133 c.1203G>C synonymous_variant 0.46 clofazimine
pretomanid
delamanid
fbiC 1304136 c.1206C>T synonymous_variant 0.46 clofazimine
pretomanid
delamanid
fbiC 1304465 p.Gly512Ala missense_variant 0.5 clofazimine
pretomanid
delamanid
fbiC 1304481 c.1551T>G synonymous_variant 0.53 clofazimine
pretomanid
delamanid
fbiC 1304484 c.1554C>G synonymous_variant 0.55 clofazimine
pretomanid
delamanid
fbiC 1304486 p.Thr519Asn missense_variant 0.56 clofazimine
pretomanid
delamanid
fbiC 1304493 c.1563C>T synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1304496 c.1566T>C synonymous_variant 0.64 clofazimine
pretomanid
delamanid
fbiC 1304503 c.1573C>T synonymous_variant 0.62 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1304508 p.Glu526Asp missense_variant 0.62 clofazimine
pretomanid
delamanid
fbiC 1304511 c.1581C>T synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304517 c.1587C>G synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1304526 c.1596T>G synonymous_variant 0.72 clofazimine
pretomanid
delamanid
fbiC 1304533 c.1603T>C synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304538 c.1608C>T synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304541 c.1611C>G synonymous_variant 0.65 clofazimine
pretomanid
delamanid
fbiC 1304546 p.Val539Ala missense_variant 0.65 clofazimine
pretomanid
delamanid
fbiC 1304559 p.Glu543Asp missense_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1304565 c.1635C>G synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1304568 c.1638T>C synonymous_variant 0.7 clofazimine
pretomanid
delamanid
fbiC 1304574 c.1644C>G synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1304580 c.1650T>C synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1304598 c.1668C>T synonymous_variant 0.65 clofazimine
pretomanid
delamanid
fbiC 1304613 c.1683T>G synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304637 c.1707G>A synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304640 c.1710A>C synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1304646 c.1716T>C synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1304658 c.1728C>T synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fbiC 1304661 c.1731C>T synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304682 c.1752C>T synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1304700 c.1770G>A synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304706 c.1776C>T synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fbiC 1304712 c.1782C>G synonymous_variant 0.64 clofazimine
pretomanid
delamanid
fbiC 1304715 c.1785G>C synonymous_variant 0.62 clofazimine
pretomanid
delamanid
fbiC 1304727 c.1797A>G synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304751 c.1821C>T synonymous_variant 0.66 clofazimine
pretomanid
delamanid
fbiC 1304769 c.1839C>T synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1304772 c.1842C>T synonymous_variant 0.61 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1304778 c.1848T>C synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1304784 c.1854T>G synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304787 c.1857T>G synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304799 c.1869G>C synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1304808 c.1878C>G synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1304811 c.1881C>G synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1304817 c.1887T>C synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1304823 c.1893C>T synonymous_variant 0.57 clofazimine
pretomanid
delamanid
fbiC 1304832 c.1902C>A synonymous_variant 0.61 clofazimine
pretomanid
delamanid
fbiC 1304853 c.1923C>G synonymous_variant 0.49 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1304856 c.1926C>G synonymous_variant 0.44 clofazimine
pretomanid
delamanid
fbiC 1304871 c.1941G>T synonymous_variant 0.3 clofazimine
pretomanid
delamanid
fbiC 1304872 c.1942_1944delAGCinsTCG synonymous_variant 0.31 clofazimine
pretomanid
delamanid
fbiC 1304877 c.1947T>C synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304880 c.1950C>G synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1304901 c.1971C>A synonymous_variant 0.44 clofazimine
pretomanid
delamanid
fbiC 1304910 c.1980G>C synonymous_variant 0.46 clofazimine
pretomanid
delamanid
fbiC 1304916 c.1986T>C synonymous_variant 0.45 clofazimine
pretomanid
delamanid
fbiC 1304922 c.1992C>T synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fbiC 1304928 c.1998T>A synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fbiC 1304937 c.2007G>C synonymous_variant 0.48 clofazimine
pretomanid
delamanid
fbiC 1304940 c.2010A>G synonymous_variant 0.47 clofazimine
pretomanid
delamanid
fbiC 1304943 c.2013C>T synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fbiC 1304946 c.2016G>C synonymous_variant 0.49 clofazimine
pretomanid
delamanid
fbiC 1304955 p.Glu675Asp missense_variant 0.49 clofazimine
pretomanid
delamanid
fbiC 1304958 c.2028T>G synonymous_variant 0.51 clofazimine
pretomanid
delamanid
fbiC 1304970 c.2040G>C synonymous_variant 0.56 clofazimine
pretomanid
delamanid
fbiC 1304979 c.2049C>G synonymous_variant 0.54 clofazimine
pretomanid
delamanid
fbiC 1304994 c.2064A>G synonymous_variant 0.58 clofazimine
pretomanid
delamanid
fbiC 1304995 p.Leu689Glu missense_variant 0.58 clofazimine
pretomanid
delamanid
fbiC 1305021 c.2091C>T synonymous_variant 0.71 clofazimine
pretomanid
delamanid
fbiC 1305025 p.Glu699Gln missense_variant 0.72 clofazimine
pretomanid
delamanid
fbiC 1305033 c.2103T>G synonymous_variant 0.7 clofazimine
pretomanid
delamanid
fbiC 1305042 c.2112A>G synonymous_variant 0.68 clofazimine
pretomanid
delamanid
fbiC 1305045 c.2115A>G synonymous_variant 0.69 clofazimine
pretomanid
delamanid
fbiC 1305063 c.2133G>C synonymous_variant 0.67 clofazimine
pretomanid
delamanid
fbiC 1305066 c.2136T>C synonymous_variant 0.63 clofazimine
pretomanid
delamanid
fbiC 1305069 c.2139G>C synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1305074 p.Ser715Asn missense_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1305078 c.2148A>G synonymous_variant 0.6 clofazimine
pretomanid
delamanid
fbiC 1305090 c.2160C>T synonymous_variant 0.59 clofazimine
pretomanid
delamanid
fbiC 1305093 c.2163C>G synonymous_variant 0.58 clofazimine
pretomanid
delamanid
fbiC 1305096 c.2166T>C synonymous_variant 0.54 clofazimine
pretomanid
delamanid
fbiC 1305099 c.2169T>G synonymous_variant 0.55 clofazimine
pretomanid
delamanid
fbiC 1305106 c.2176C>T synonymous_variant 0.55 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1305113 p.Asp728Gly missense_variant 0.54 clofazimine
pretomanid
delamanid
fbiC 1305117 c.2187T>C synonymous_variant 0.53 clofazimine
pretomanid
delamanid
fbiC 1305123 c.2193C>T synonymous_variant 0.51 clofazimine
pretomanid
delamanid
fbiC 1305126 c.2196T>C synonymous_variant 0.52 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1305150 c.2220C>G synonymous_variant 0.47 clofazimine
pretomanid
delamanid
fbiC 1305154 c.2224T>C synonymous_variant 0.44 clofazimine
pretomanid
delamanid
fbiC 1305159 c.2229G>A synonymous_variant 0.44 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1305168 c.2238C>T synonymous_variant 0.38 clofazimine Not assoc w R - Interim
pretomanid
delamanid Not assoc w R - Interim
fbiC 1305173 p.Asn748Ser missense_variant 0.35 clofazimine
pretomanid
delamanid
fbiC 1305177 c.2247A>G synonymous_variant 0.33 clofazimine
pretomanid
delamanid
fbiC 1305186 c.2256C>T synonymous_variant 0.28 clofazimine
pretomanid
delamanid
sigE 1364634 c.222C>A synonymous_variant 0.47 pyrazinamide
sigE 1364649 c.237C>G synonymous_variant 0.69 pyrazinamide
sigE 1364650 c.238_240delACCinsGG frameshift_variant&missense_variant 0.67 pyrazinamide Uncertain significance
sigE 1364676 c.264C>G synonymous_variant 0.72 pyrazinamide
sigE 1364688 c.276C>A synonymous_variant 0.74 pyrazinamide
sigE 1364709 c.297T>C synonymous_variant 0.72 pyrazinamide
sigE 1364712 c.300T>C synonymous_variant 0.73 pyrazinamide
sigE 1364715 c.303G>T synonymous_variant 0.73 pyrazinamide
sigE 1364721 c.309C>G synonymous_variant 0.74 pyrazinamide
sigE 1364736 c.324T>C synonymous_variant 0.75 pyrazinamide Not assoc w R - Interim
sigE 1364742 c.330A>G synonymous_variant 0.75 pyrazinamide
sigE 1364748 c.336G>C synonymous_variant 0.73 pyrazinamide
sigE 1364751 c.339C>T synonymous_variant 0.73 pyrazinamide
sigE 1364763 c.351T>C synonymous_variant 0.71 pyrazinamide
sigE 1364767 c.355A>C synonymous_variant 0.73 pyrazinamide
sigE 1364772 c.360G>A synonymous_variant 0.74 pyrazinamide
sigE 1364778 c.366G>A synonymous_variant 0.71 pyrazinamide
sigE 1364784 c.372C>G synonymous_variant 0.71 pyrazinamide
sigE 1364790 c.378T>C synonymous_variant 0.72 pyrazinamide
sigE 1364793 c.381C>T synonymous_variant 0.69 pyrazinamide
sigE 1364799 c.387G>C synonymous_variant 0.67 pyrazinamide
sigE 1364802 c.390C>G synonymous_variant 0.76 pyrazinamide
sigE 1364811 c.399A>G synonymous_variant 0.78 pyrazinamide
sigE 1364820 c.408A>G synonymous_variant 0.78 pyrazinamide
sigE 1364839 c.427T>C synonymous_variant 0.8 pyrazinamide
sigE 1364844 c.432C>T synonymous_variant 0.8 pyrazinamide
sigE 1364856 c.444C>G synonymous_variant 0.8 pyrazinamide
sigE 1364862 c.450C>G synonymous_variant 0.8 pyrazinamide
sigE 1364865 c.453G>T synonymous_variant 0.8 pyrazinamide
sigE 1364866 p.Ala152Ser missense_variant 0.8 pyrazinamide
sigE 1364872 c.460_462delATCinsGT frameshift_variant&missense_variant 0.77 pyrazinamide Uncertain significance
sigE 1364889 c.477A>G synonymous_variant 0.78 pyrazinamide Not assoc w R - Interim
sigE 1364898 c.486C>T synonymous_variant 0.75 pyrazinamide
sigE 1364919 c.507T>C synonymous_variant 0.79 pyrazinamide
sigE 1364949 c.537C>T synonymous_variant 0.77 pyrazinamide
sigE 1364952 c.540A>G synonymous_variant 0.75 pyrazinamide
sigE 1364961 c.549A>G synonymous_variant 0.65 pyrazinamide
sigE 1364962 p.Pro184Ala missense_variant 0.65 pyrazinamide
sigE 1364976 c.564T>G synonymous_variant 0.67 pyrazinamide
sigE 1364979 c.567C>G synonymous_variant 0.67 pyrazinamide
sigE 1364980 c.568T>C synonymous_variant 0.67 pyrazinamide
sigE 1364984 p.Ala191Asp missense_variant 0.69 pyrazinamide
sigE 1364989 c.577_579delCTGinsTA frameshift_variant&stop_gained 0.69 pyrazinamide Uncertain significance
sigE 1365000 c.588G>A synonymous_variant 0.67 pyrazinamide Not assoc w R - Interim
sigE 1365003 c.591T>C synonymous_variant 0.67 pyrazinamide
sigE 1365006 c.594T>G synonymous_variant 0.65 pyrazinamide
sigE 1365019 c.607C>T synonymous_variant 0.67 pyrazinamide
sigE 1365024 c.612T>C synonymous_variant 0.69 pyrazinamide
sigE 1365039 c.627G>C synonymous_variant 0.62 pyrazinamide
sigE 1365042 c.630G>C synonymous_variant 0.61 pyrazinamide
sigE 1365045 c.633C>T synonymous_variant 0.65 pyrazinamide
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0 streptomycin Uncertain significance
isoniazid Uncertain significance
pyrazinamide Uncertain significance
atpE 1461083 c.39T>C synonymous_variant 0.29 bedaquiline
atpE 1461093 p.Met17Leu missense_variant 0.27 bedaquiline
atpE 1461097 p.Ala18Gly missense_variant 0.27 bedaquiline
atpE 1461101 c.57T>C synonymous_variant 0.3 bedaquiline
atpE 1461108 p.Ile22Val missense_variant 0.29 bedaquiline
atpE 1461118 p.Gly25Ala missense_variant 0.32 bedaquiline
atpE 1461128 c.84C>T synonymous_variant 0.33 bedaquiline
atpE 1461131 c.87T>C synonymous_variant 0.32 bedaquiline
atpE 1461132 p.Val30Ile missense_variant 0.32 bedaquiline
atpE 1461149 c.105T>G synonymous_variant 0.33 bedaquiline
atpE 1461158 c.114T>C synonymous_variant 0.35 bedaquiline
atpE 1461161 c.117C>T synonymous_variant 0.35 bedaquiline
atpE 1461170 c.126A>G synonymous_variant 0.38 bedaquiline
atpE 1461182 c.138A>G synonymous_variant 0.43 bedaquiline
atpE 1461185 c.141G>C synonymous_variant 0.43 bedaquiline
atpE 1461189 c.145C>T synonymous_variant 0.45 bedaquiline
atpE 1461197 c.153A>G synonymous_variant 0.43 bedaquiline
atpE 1461219 c.175T>C synonymous_variant 0.45 bedaquiline
rrs 1471996 n.151C>T non_coding_transcript_exon_variant 0.75 streptomycin
kanamycin
capreomycin
amikacin
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.82 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.8 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472973 n.1128A>G non_coding_transcript_exon_variant 0.8 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.81 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.71 streptomycin Uncertain significance
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473202 n.1357C>T non_coding_transcript_exon_variant 0.79 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473276 n.1431A>C non_coding_transcript_exon_variant 0.73 streptomycin
kanamycin
capreomycin
amikacin
rrs 1473277 n.1432G>A non_coding_transcript_exon_variant 0.73 streptomycin
kanamycin Uncertain significance
capreomycin Uncertain significance
amikacin Uncertain significance
rrs 1473289 n.1444T>G non_coding_transcript_exon_variant 0.77 streptomycin
kanamycin
capreomycin
amikacin
rrs 1473291 n.1446_1455delGGGAGGGAGCinsAAGGGAGGGAGT non_coding_transcript_exon_variant 0.83 streptomycin
kanamycin
capreomycin
amikacin
rrs 1473301 n.1456T>G non_coding_transcript_exon_variant 0.83 streptomycin
kanamycin
capreomycin
amikacin
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 1.0 capreomycin Uncertain significance
linezolid
rrl 1476583 n.2926G>C non_coding_transcript_exon_variant 0.86 capreomycin
linezolid
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.86 capreomycin Uncertain significance
linezolid
inhA 1673499 c.-703T>G upstream_gene_variant 0.39 ethionamide
isoniazid
inhA 1673502 c.-700C>G upstream_gene_variant 0.42 ethionamide
isoniazid
inhA 1673505 c.-697A>C upstream_gene_variant 0.42 ethionamide
isoniazid
inhA 1673520 c.-682C>T upstream_gene_variant 0.41 ethionamide
isoniazid
inhA 1673523 c.-679G>T upstream_gene_variant 0.41 ethionamide
isoniazid
inhA 1673535 c.-667A>C upstream_gene_variant 0.49 ethionamide
isoniazid
inhA 1673547 c.-655T>C upstream_gene_variant 0.51 ethionamide
isoniazid
fabG1 1673549 p.Ala37Glu missense_variant 0.5 ethionamide
isoniazid
inhA 1673574 c.-628C>G upstream_gene_variant 0.56 ethionamide
isoniazid
inhA 1673580 c.-622T>C upstream_gene_variant 0.57 ethionamide
isoniazid Uncertain significance
inhA 1673589 c.-613A>G upstream_gene_variant 0.57 ethionamide
isoniazid
fabG1 1673591 p.Ala51Val missense_variant 0.57 ethionamide
isoniazid
inhA 1673595 c.-607A>C upstream_gene_variant 0.57 ethionamide
isoniazid
fabG1 1673596 c.157_159delAAGinsGA frameshift_variant&missense_variant 0.57 ethionamide
isoniazid
inhA 1673607 c.-595T>C upstream_gene_variant 0.63 ethionamide
isoniazid
inhA 1673616 c.-586A>G upstream_gene_variant 0.65 ethionamide
isoniazid
fabG1 1673633 p.Ser65Asn missense_variant 0.65 ethionamide
isoniazid
fabG1 1673657 p.Thr73Lys missense_variant 0.62 ethionamide
isoniazid
fabG1 1673660 p.Ala74Glu missense_variant 0.64 ethionamide
isoniazid
inhA 1673664 c.-538A>C upstream_gene_variant 0.64 ethionamide
isoniazid
inhA 1673667 c.-535A>G upstream_gene_variant 0.66 ethionamide
isoniazid
fabG1 1673710 c.271_273delCTAinsAC frameshift_variant&missense_variant 0.55 ethionamide
isoniazid
fabG1 1673716 p.Ala93Lys missense_variant 0.65 ethionamide
isoniazid
fabG1 1673733 p.Met98Ile missense_variant 0.65 ethionamide
isoniazid
inhA 1673748 c.-454A>G upstream_gene_variant 0.61 ethionamide
isoniazid
fabG1 1673749 p.Lys104Arg missense_variant 0.59 ethionamide
isoniazid
inhA 1673754 c.-448C>T upstream_gene_variant 0.6 ethionamide
isoniazid
fabG1 1673758 p.Lys107Glu missense_variant 0.62 ethionamide
isoniazid
fabG1 1673890 p.Ala151Ser missense_variant 0.74 ethionamide
isoniazid
inhA 1673901 c.-301A>G upstream_gene_variant 0.75 ethionamide
isoniazid
fabG1 1673905 p.Ser156Ala missense_variant 0.73 ethionamide
isoniazid
inhA 1673916 c.-286A>C upstream_gene_variant 0.72 ethionamide
isoniazid
fabG1 1673917 p.Val160Leu missense_variant 0.72 ethionamide
isoniazid
inhA 1673922 c.-280T>C upstream_gene_variant 0.72 ethionamide
isoniazid
fabG1 1673941 p.Ala168Ser missense_variant 0.75 ethionamide
isoniazid
inhA 1673955 c.-247G>C upstream_gene_variant 0.81 ethionamide
isoniazid
inhA 1673961 c.-241A>C upstream_gene_variant 0.81 ethionamide
isoniazid
fabG1 1673962 p.Asn175Gly missense_variant 0.81 ethionamide
isoniazid
inhA 1673988 c.-214G>C upstream_gene_variant 0.81 ethionamide
isoniazid
fabG1 1674006 p.Asp189Glu missense_variant 0.8 ethionamide
isoniazid
inhA 1674018 c.-184G>A upstream_gene_variant 0.79 ethionamide
isoniazid
inhA 1674024 c.-178T>C upstream_gene_variant 0.78 ethionamide
isoniazid
inhA 1674027 c.-175G>A upstream_gene_variant 0.78 ethionamide
isoniazid
fabG1 1674037 p.Gln200Ala missense_variant 0.71 ethionamide
isoniazid
inhA 1674042 c.-160G>C upstream_gene_variant 0.7 ethionamide
isoniazid Uncertain significance
inhA 1674045 c.-157G>A upstream_gene_variant 0.69 ethionamide
isoniazid
fabG1 1674049 p.Gln204Glu missense_variant 0.67 ethionamide
isoniazid
inhA 1674054 c.-148T>C upstream_gene_variant 0.69 ethionamide
isoniazid
inhA 1674060 c.-142A>G upstream_gene_variant 0.69 ethionamide
isoniazid
inhA 1674063 c.-139G>C upstream_gene_variant 0.69 ethionamide
isoniazid
fabG1 1674079 p.Pro214Ala missense_variant 0.69 ethionamide
isoniazid
inhA 1674109 c.-93C>T upstream_gene_variant 0.72 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674114 c.-88T>A upstream_gene_variant 0.72 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674123 c.-79T>C upstream_gene_variant 0.73 ethionamide
isoniazid
inhA 1674129 c.-73C>T upstream_gene_variant 0.72 ethionamide
isoniazid
inhA 1674132 c.-70T>C upstream_gene_variant 0.72 ethionamide
isoniazid
fabG1 1674136 p.Ser233Ala missense_variant 0.71 ethionamide
isoniazid
inhA 1674141 c.-61T>C upstream_gene_variant 0.73 ethionamide
isoniazid
inhA 1674165 c.-37C>T upstream_gene_variant 0.62 ethionamide
isoniazid
inhA 1674171 c.-31T>C upstream_gene_variant 0.62 ethionamide
isoniazid
inhA 1674184 c.-18_-17insGAAA upstream_gene_variant 0.64 ethionamide
isoniazid
inhA 1674190 c.-11delC upstream_gene_variant 0.62 ethionamide
isoniazid
inhA 1674199 c.-3C>G upstream_gene_variant 0.65 ethionamide
isoniazid Uncertain significance
inhA 1674205 p.Thr2Ala missense_variant 0.66 ethionamide
isoniazid Uncertain significance
inhA 1674216 c.15G>C synonymous_variant 0.66 ethionamide
isoniazid
inhA 1674219 p.Asp6Glu missense_variant 0.66 ethionamide
isoniazid
inhA 1674237 c.36T>C synonymous_variant 0.61 ethionamide
isoniazid
inhA 1674243 c.42A>G synonymous_variant 0.61 ethionamide
isoniazid
inhA 1674256 p.Ser19Ala missense_variant 0.51 ethionamide
isoniazid Uncertain significance
inhA 1674531 c.330C>T synonymous_variant 0.27 ethionamide
isoniazid
inhA 1674534 c.333G>T synonymous_variant 0.26 ethionamide
isoniazid
inhA 1674537 c.336C>A synonymous_variant 0.26 ethionamide
isoniazid
inhA 1674542 p.Ala114Glu missense_variant 0.25 ethionamide
isoniazid
inhA 1674546 c.345T>C synonymous_variant 0.27 ethionamide
isoniazid
inhA 1674555 c.354G>A synonymous_variant 0.28 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674561 c.360C>T synonymous_variant 0.38 ethionamide
isoniazid
inhA 1674573 c.372G>A synonymous_variant 0.45 ethionamide
isoniazid
inhA 1674582 c.381T>C synonymous_variant 0.42 ethionamide
isoniazid
inhA 1674585 c.384T>A synonymous_variant 0.43 ethionamide
isoniazid
inhA 1674588 c.387G>A synonymous_variant 0.44 ethionamide
isoniazid
inhA 1674589 p.Met130Leu missense_variant 0.44 ethionamide
isoniazid
inhA 1674618 c.417C>T synonymous_variant 0.61 ethionamide
isoniazid
inhA 1674621 c.420C>G synonymous_variant 0.58 ethionamide
isoniazid
inhA 1674624 c.423A>C synonymous_variant 0.59 ethionamide
isoniazid
inhA 1674625 c.424_426delGGTinsAC frameshift_variant&missense_variant 0.59 ethionamide
isoniazid
inhA 1674628 c.427_429delTCCinsGG frameshift_variant&missense_variant 0.58 ethionamide
isoniazid
inhA 1674636 c.435C>G synonymous_variant 0.61 ethionamide
isoniazid
inhA 1674645 c.444C>T synonymous_variant 0.65 ethionamide
isoniazid
inhA 1674651 c.450C>T synonymous_variant 0.67 ethionamide
isoniazid
inhA 1674656 p.Ser152Thr missense_variant 0.67 ethionamide
isoniazid
inhA 1674690 c.489C>G synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674703 c.502T>C synonymous_variant 0.79 ethionamide
isoniazid
inhA 1674718 c.517A>C synonymous_variant 0.81 ethionamide
isoniazid
inhA 1674726 c.525G>C synonymous_variant 0.78 ethionamide
isoniazid
inhA 1674732 c.531C>T synonymous_variant 0.77 ethionamide
isoniazid
inhA 1674738 c.537C>G synonymous_variant 0.72 ethionamide
isoniazid
inhA 1674741 c.540C>T synonymous_variant 0.7 ethionamide
isoniazid Not assoc w R - Interim
inhA 1674742 p.Lys181Gln missense_variant 0.71 ethionamide
isoniazid
inhA 1674756 c.555T>C synonymous_variant 0.77 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674759 c.558G>C synonymous_variant 0.77 ethionamide
isoniazid
inhA 1674771 c.570C>A synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674774 c.573A>C synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674777 c.576C>G synonymous_variant 0.73 ethionamide
isoniazid
inhA 1674780 c.579T>G synonymous_variant 0.74 ethionamide
isoniazid
inhA 1674792 c.591G>T synonymous_variant 0.68 ethionamide
isoniazid
inhA 1674795 c.594G>C synonymous_variant 0.7 ethionamide
isoniazid
inhA 1674801 c.600T>C synonymous_variant 0.73 ethionamide
isoniazid
inhA 1674813 c.612C>T synonymous_variant 0.78 ethionamide
isoniazid
inhA 1674835 p.Gly212Ser missense_variant 0.76 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674839 p.Ala213Gly missense_variant 0.76 ethionamide
isoniazid
inhA 1674846 p.Ile215Met missense_variant 0.77 ethionamide
isoniazid
inhA 1674850 c.649C>T synonymous_variant 0.76 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
inhA 1674859 p.Glu220Gln missense_variant 0.76 ethionamide
isoniazid
inhA 1674870 c.669T>C synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674876 c.675C>A synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674879 c.678T>G synonymous_variant 0.76 ethionamide
isoniazid
inhA 1674888 c.687C>T synonymous_variant 0.75 ethionamide
isoniazid
inhA 1674900 c.699G>A synonymous_variant 0.62 ethionamide
isoniazid
inhA 1674903 c.702T>C synonymous_variant 0.65 ethionamide
isoniazid
inhA 1674904 p.Ala235Pro missense_variant 0.67 ethionamide
isoniazid
inhA 1674909 c.708G>C synonymous_variant 0.65 ethionamide
isoniazid
inhA 1674912 c.711G>A synonymous_variant 0.68 ethionamide
isoniazid
inhA 1674915 c.714C>T synonymous_variant 0.71 ethionamide
isoniazid
inhA 1674924 c.723G>A synonymous_variant 0.76 ethionamide
isoniazid
inhA 1674927 c.726G>C synonymous_variant 0.77 ethionamide
isoniazid
inhA 1674934 p.Leu245Val missense_variant 0.76 ethionamide
isoniazid
inhA 1674942 c.741T>C synonymous_variant 0.8 ethionamide
isoniazid
inhA 1674951 c.750G>A synonymous_variant 0.79 ethionamide
isoniazid
inhA 1674957 c.756G>C synonymous_variant 0.74 ethionamide
isoniazid
inhA 1674966 c.765T>C synonymous_variant 0.74 ethionamide
isoniazid
inhA 1674990 c.789C>A synonymous_variant 0.66 ethionamide
isoniazid
inhA 1674993 c.792G>C synonymous_variant 0.65 ethionamide
isoniazid
inhA 1674999 c.798C>G synonymous_variant 0.6 ethionamide
isoniazid
inhA 1675002 c.801A>G synonymous_variant 0.6 ethionamide
isoniazid
inhA 1675010 c.809_*5delAGAACGCinsG frameshift_variant&stop_lost&splice_region_variant 0.62 ethionamide
isoniazid
rpsA 1833536 c.-6_-3delAACAinsCCC upstream_gene_variant 0.47 pyrazinamide
rpsA 1833568 c.27G>C synonymous_variant 0.58 pyrazinamide Not assoc w R - Interim
rpsA 1833589 c.48A>C synonymous_variant 0.64 pyrazinamide
rpsA 1833595 c.54T>G synonymous_variant 0.65 pyrazinamide
rpsA 1833607 c.66T>C synonymous_variant 0.68 pyrazinamide
rpsA 1833610 c.69C>A synonymous_variant 0.68 pyrazinamide
rpsA 1833616 c.75A>C synonymous_variant 0.69 pyrazinamide
rpsA 1833619 c.78A>C synonymous_variant 0.69 pyrazinamide
rpsA 1833628 c.87G>C synonymous_variant 0.72 pyrazinamide
rpsA 1833634 c.93G>A synonymous_variant 0.74 pyrazinamide
rpsA 1833664 c.123C>G synonymous_variant 0.78 pyrazinamide
rpsA 1833676 c.135A>G synonymous_variant 0.82 pyrazinamide
rpsA 1833679 c.138G>C synonymous_variant 0.82 pyrazinamide
rpsA 1833694 c.153G>C synonymous_variant 0.83 pyrazinamide
rpsA 1833697 c.156C>G synonymous_variant 0.82 pyrazinamide
rpsA 1833709 c.168C>G synonymous_variant 0.87 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 0.88 pyrazinamide
rpsA 1833733 c.192C>G synonymous_variant 0.86 pyrazinamide
rpsA 1833734 p.Ala65Ser missense_variant 0.86 pyrazinamide
rpsA 1833772 c.231C>T synonymous_variant 0.85 pyrazinamide
rpsA 1833778 c.237C>G synonymous_variant 0.83 pyrazinamide
rpsA 1833781 c.240T>G synonymous_variant 0.83 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 0.79 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 0.8 pyrazinamide
rpsA 1833805 c.264C>T synonymous_variant 0.8 pyrazinamide
rpsA 1833811 c.270G>C synonymous_variant 0.81 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 0.81 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 0.81 pyrazinamide
rpsA 1833874 c.333T>C synonymous_variant 0.84 pyrazinamide
rpsA 1833886 c.345C>G synonymous_variant 0.85 pyrazinamide
rpsA 1833889 c.348C>T synonymous_variant 0.85 pyrazinamide
rpsA 1833901 c.360G>A synonymous_variant 0.84 pyrazinamide
rpsA 1833904 c.363G>A synonymous_variant 0.85 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 0.87 pyrazinamide
rpsA