Rv1305 - c.138A>G


Drug resistance types
51 Sensitive 4 RR-TB 86 HR-TB 11 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 101 Other
lineage Counts
lineage Count
lineage3;lineage4.9 1
lineage4.9 142
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage1.1.3.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
3
lineage2.2.1 10
La1.2.BCG 1
La1.7;lineage4.9 8
lineage4.3.4 1
lineage4 6
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
lineage4.5 1
lineage4.1.1.3 3
lineage3 2
La1.7;M.canetti;lineage4.9 4
La3;lineage4.9 7
lineage4.9;lineage7 2
lineage4.3.4.1 2
lineage4.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9 2
lineage3.1;lineage9 1
La1;lineage4.9 3
M.canetti;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2 2
La1;lineage2;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 3
lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
La1.7.1;lineage4.9 1
La1.7 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.1.3;lineage4.9 2
La1.7;lineage4.9;lineage6 1
lineage4.1.2 1
lineage4.1.2.1 1
La1.7;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage1;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.4.1.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 257
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341396 Other lineage3;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR11252736 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR212001 HR-TB None
SRR6045795 Other lineage2.2.1 None
ERR369162 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675385 Other La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675265 Other lineage4 None
SRR6046878 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR926156 Other lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2514552 Sensitive lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR363479 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
ERR1063896 HR-TB None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR363449 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR373945 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797043 Sensitive lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769474 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926155 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349266 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
SRR12708416 Sensitive None
SRR28044873 Pre-XDR-TB lineage3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR6866410 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR14782054 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR323107 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR363453 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
ERR369156 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR502510 HR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None