Run ID: ERR550636
Sample name:
Date: 18-08-2022 09:22:52
Number of reads: 1245089
Percentage reads mapped: 79.35
Strain: lineage4.1.1.3
Drug-resistance: MDR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 0.97 |
lineage4.1 | Euro-American | T;X;H | None | 0.95 |
lineage4.1.1 | Euro-American (X-type) | X1;X2;X3 | None | 0.97 |
lineage4.1.1.3 | Euro-American (X-type) | X1;X3 | RD193 | 0.91 |
lineage3.1.2.2 | East-African-Indian | CAS | RD750 | 0.06 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761155 | p.Ser450Leu | missense_variant | 0.89 | rifampicin |
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 0.18 | streptomycin |
rrs | 1472723 | n.878G>A | non_coding_transcript_exon_variant | 0.8 | streptomycin |
fabG1 | 1673425 | c.-15C>T | upstream_gene_variant | 1.0 | isoniazid, ethionamide |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid |
pncA | 2288782 | p.Arg154Gly | missense_variant | 1.0 | pyrazinamide |
ald | 3087278 | c.464delG | frameshift_variant | 1.0 | cycloserine |
embA | 4243217 | c.-16C>G | upstream_gene_variant | 1.0 | ethambutol |
embB | 4247431 | p.Met306Ile | missense_variant | 0.78 | ethambutol |
embB | 4247448 | p.His312Arg | missense_variant | 0.24 | ethambutol |
ethA | 4326279 | c.1192_1194dupGTG | conservative_inframe_insertion | 0.96 | ethionamide |
ethA | 4326604 | c.869dupA | frameshift_variant | 1.0 | ethionamide |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6178 | c.939C>T | synonymous_variant | 0.25 |
gyrB | 6215 | p.Ser326Thr | missense_variant | 0.33 |
gyrB | 6223 | c.984G>C | synonymous_variant | 0.37 |
gyrB | 6235 | c.996C>A | synonymous_variant | 0.33 |
gyrB | 6238 | c.999G>A | synonymous_variant | 0.35 |
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.37 |
gyrB | 6250 | c.1011A>G | synonymous_variant | 0.38 |
gyrB | 6268 | c.1029C>G | synonymous_variant | 0.34 |
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.4 |
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.38 |
gyrB | 6292 | c.1053G>C | synonymous_variant | 0.36 |
gyrB | 6295 | c.1056A>G | synonymous_variant | 0.35 |
gyrA | 6307 | c.-995T>G | upstream_gene_variant | 0.31 |
gyrA | 6319 | c.-983G>C | upstream_gene_variant | 0.31 |
gyrA | 6325 | c.-977C>G | upstream_gene_variant | 0.28 |
gyrA | 6334 | c.-968G>A | upstream_gene_variant | 0.24 |
gyrA | 6346 | c.-956C>G | upstream_gene_variant | 0.19 |
gyrA | 6361 | c.-941G>A | upstream_gene_variant | 0.15 |
gyrA | 6382 | c.-920A>G | upstream_gene_variant | 0.16 |
gyrA | 6388 | c.-914T>C | upstream_gene_variant | 0.16 |
gyrA | 6406 | c.-896C>T | upstream_gene_variant | 0.14 |
gyrA | 6413 | c.-889C>T | upstream_gene_variant | 0.15 |
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 0.16 |
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 0.15 |
gyrA | 6706 | c.-596G>A | upstream_gene_variant | 0.15 |
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 0.14 |
gyrA | 6745 | c.-557T>C | upstream_gene_variant | 0.17 |
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 0.17 |
gyrA | 6766 | c.-536G>C | upstream_gene_variant | 0.19 |
gyrA | 6775 | c.-527G>C | upstream_gene_variant | 0.2 |
gyrA | 6778 | c.-524C>T | upstream_gene_variant | 0.19 |
gyrA | 6793 | c.-509T>C | upstream_gene_variant | 0.2 |
gyrB | 6794 | p.Ile519Leu | missense_variant | 0.2 |
gyrB | 6797 | p.Gly520Thr | missense_variant | 0.2 |
gyrA | 6811 | c.-491C>T | upstream_gene_variant | 0.19 |
gyrA | 6847 | c.-455C>T | upstream_gene_variant | 0.15 |
gyrA | 6869 | c.-433T>C | upstream_gene_variant | 0.16 |
gyrA | 6872 | c.-430T>C | upstream_gene_variant | 0.16 |
gyrA | 6889 | c.-413G>T | upstream_gene_variant | 0.18 |
gyrA | 6904 | c.-398C>G | upstream_gene_variant | 0.16 |
gyrA | 6910 | c.-392G>A | upstream_gene_variant | 0.15 |
gyrA | 7057 | c.-245C>G | upstream_gene_variant | 0.15 |
gyrA | 7060 | c.-242T>C | upstream_gene_variant | 0.15 |
gyrA | 7066 | c.-236G>C | upstream_gene_variant | 0.17 |
gyrA | 7078 | c.-224A>C | upstream_gene_variant | 0.16 |
gyrA | 7084 | c.-218A>G | upstream_gene_variant | 0.19 |
gyrA | 7090 | c.-212C>T | upstream_gene_variant | 0.17 |
gyrA | 7093 | c.-209T>C | upstream_gene_variant | 0.17 |
gyrA | 7099 | c.-203G>A | upstream_gene_variant | 0.17 |
gyrA | 7108 | c.-194G>A | upstream_gene_variant | 0.19 |
gyrA | 7114 | c.-188C>A | upstream_gene_variant | 0.21 |
gyrB | 7124 | p.Ser629Thr | missense_variant | 0.18 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7427 | c.126G>C | synonymous_variant | 0.18 |
gyrA | 7442 | c.141G>C | synonymous_variant | 0.23 |
gyrA | 7451 | c.150C>G | synonymous_variant | 0.23 |
gyrA | 7457 | c.156T>C | synonymous_variant | 0.23 |
gyrA | 7475 | c.174A>G | synonymous_variant | 0.24 |
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.24 |
gyrA | 7484 | c.183T>C | synonymous_variant | 0.24 |
gyrA | 7490 | c.189C>G | synonymous_variant | 0.25 |
gyrA | 7523 | c.222C>G | synonymous_variant | 0.19 |
gyrA | 7526 | c.225G>T | synonymous_variant | 0.19 |
gyrA | 7532 | c.231T>C | synonymous_variant | 0.18 |
gyrA | 7541 | c.240C>G | synonymous_variant | 0.18 |
gyrA | 7547 | c.246C>T | synonymous_variant | 0.18 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 8267 | c.966G>C | synonymous_variant | 0.18 |
gyrA | 8283 | p.Ile328Leu | missense_variant | 0.16 |
gyrA | 8375 | c.1074G>C | synonymous_variant | 0.15 |
gyrA | 8382 | p.Leu361Met | missense_variant | 0.15 |
gyrA | 8393 | c.1092T>C | synonymous_variant | 0.17 |
gyrA | 8399 | c.1098T>C | synonymous_variant | 0.18 |
gyrA | 8401 | p.Asp367Ala | missense_variant | 0.17 |
gyrA | 8405 | c.1104C>T | synonymous_variant | 0.19 |
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.15 |
gyrA | 8442 | c.1141C>T | synonymous_variant | 0.15 |
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.16 |
gyrA | 8459 | c.1158G>A | synonymous_variant | 0.15 |
gyrA | 8672 | c.1371A>G | synonymous_variant | 0.17 |
gyrA | 8690 | c.1389C>G | synonymous_variant | 0.18 |
gyrA | 8693 | c.1392T>C | synonymous_variant | 0.17 |
gyrA | 8711 | c.1410A>C | synonymous_variant | 0.18 |
gyrA | 8714 | c.1413A>G | synonymous_variant | 0.17 |
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.16 |
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.17 |
gyrA | 8918 | c.1617C>T | synonymous_variant | 0.21 |
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.2 |
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.2 |
gyrA | 8946 | c.1645_1647delTTGinsCTC | synonymous_variant | 0.22 |
gyrA | 8966 | c.1665C>G | synonymous_variant | 0.24 |
gyrA | 8967 | p.Ala556Arg | missense_variant | 0.24 |
gyrA | 8990 | c.1689C>G | synonymous_variant | 0.19 |
gyrA | 8996 | c.1695T>C | synonymous_variant | 0.18 |
gyrA | 8998 | p.Leu566Trp | missense_variant | 0.16 |
gyrA | 9089 | c.1788G>C | synonymous_variant | 0.14 |
gyrA | 9128 | c.1827C>A | synonymous_variant | 0.18 |
gyrA | 9134 | c.1833C>G | synonymous_variant | 0.17 |
gyrA | 9143 | c.1842T>C | synonymous_variant | 0.17 |
gyrA | 9147 | p.Gly616Ser | missense_variant | 0.17 |
gyrA | 9153 | p.Thr618Glu | missense_variant | 0.17 |
gyrA | 9179 | c.1878C>G | synonymous_variant | 0.21 |
gyrA | 9182 | c.1881T>C | synonymous_variant | 0.22 |
gyrA | 9191 | c.1890G>T | synonymous_variant | 0.22 |
gyrA | 9200 | c.1899A>G | synonymous_variant | 0.22 |
gyrA | 9204 | p.Ser635Thr | missense_variant | 0.21 |
gyrA | 9224 | c.1923C>T | synonymous_variant | 0.22 |
gyrA | 9230 | c.1929T>C | synonymous_variant | 0.22 |
gyrA | 9233 | c.1932C>T | synonymous_variant | 0.2 |
gyrA | 9252 | p.Val651Ile | missense_variant | 0.22 |
gyrA | 9268 | p.Asn656Ser | missense_variant | 0.25 |
gyrA | 9275 | c.1974G>A | synonymous_variant | 0.21 |
gyrA | 9284 | c.1983T>C | synonymous_variant | 0.21 |
gyrA | 9293 | c.1992G>C | synonymous_variant | 0.21 |
gyrA | 9296 | c.1995T>C | synonymous_variant | 0.21 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
gyrA | 9308 | p.Asp669Glu | missense_variant | 0.23 |
gyrA | 9315 | c.2014C>T | synonymous_variant | 0.22 |
gyrA | 9335 | c.2034G>C | synonymous_variant | 0.22 |
gyrA | 9345 | c.2044A>C | synonymous_variant | 0.2 |
gyrA | 9365 | c.2064G>A | synonymous_variant | 0.19 |
gyrA | 9374 | c.2073G>T | synonymous_variant | 0.19 |
gyrA | 9377 | c.2076A>G | synonymous_variant | 0.2 |
gyrA | 9383 | c.2082T>C | synonymous_variant | 0.2 |
gyrA | 9386 | c.2085T>C | synonymous_variant | 0.19 |
gyrA | 9395 | c.2094G>C | synonymous_variant | 0.18 |
gyrA | 9398 | c.2097T>C | synonymous_variant | 0.18 |
mshA | 575770 | c.423G>A | synonymous_variant | 0.15 |
mshA | 575771 | p.Val142Ser | missense_variant | 0.15 |
mshA | 575812 | c.465C>T | synonymous_variant | 0.16 |
mshA | 575821 | c.474G>C | synonymous_variant | 0.16 |
mshA | 575824 | c.477T>A | synonymous_variant | 0.18 |
mshA | 575845 | c.498C>G | synonymous_variant | 0.2 |
mshA | 575944 | c.597T>C | synonymous_variant | 0.14 |
mshA | 575953 | c.606G>C | synonymous_variant | 0.14 |
rpoB | 760085 | c.279C>T | synonymous_variant | 0.16 |
rpoB | 760091 | c.285G>C | synonymous_variant | 0.16 |
rpoB | 760100 | c.294G>A | synonymous_variant | 0.18 |
rpoB | 760101 | c.295T>C | synonymous_variant | 0.18 |
rpoB | 760112 | c.306T>C | synonymous_variant | 0.18 |
rpoB | 760118 | c.312T>G | synonymous_variant | 0.18 |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.17 |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.18 |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.24 |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.24 |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.24 |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.2 |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.2 |
rpoB | 760274 | c.468G>A | synonymous_variant | 0.25 |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.26 |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.22 |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.2 |
rpoB | 760337 | c.531C>G | synonymous_variant | 0.19 |
rpoB | 760340 | c.534G>C | synonymous_variant | 0.19 |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.21 |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.2 |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.2 |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.2 |
rpoB | 760415 | c.609C>T | synonymous_variant | 0.27 |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.23 |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.24 |
rpoB | 760457 | c.651C>G | synonymous_variant | 0.27 |
rpoB | 760463 | c.657C>T | synonymous_variant | 0.26 |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.27 |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.25 |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.25 |
rpoB | 760487 | c.681G>C | synonymous_variant | 0.26 |
rpoB | 760514 | c.708C>T | synonymous_variant | 0.24 |
rpoB | 760520 | c.714C>G | synonymous_variant | 0.23 |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.23 |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.23 |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.2 |
rpoB | 760547 | c.741G>T | synonymous_variant | 0.2 |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.15 |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.18 |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.16 |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.17 |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.15 |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.16 |
rpoB | 760751 | c.945G>C | synonymous_variant | 0.14 |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.19 |
rpoB | 760817 | c.1011A>G | synonymous_variant | 0.18 |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.18 |
rpoB | 760826 | c.1020C>G | synonymous_variant | 0.19 |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.22 |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.24 |
rpoB | 760845 | p.Thr347Ala | missense_variant | 0.24 |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.24 |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.24 |
rpoB | 760869 | p.Val355Ser | missense_variant | 0.26 |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.28 |
rpoB | 760919 | c.1113C>G | synonymous_variant | 0.29 |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.29 |
rpoB | 760928 | c.1122G>T | synonymous_variant | 0.27 |
rpoB | 760931 | c.1125C>G | synonymous_variant | 0.28 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.25 |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.27 |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.23 |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.17 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.18 |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.19 |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.18 |
rpoB | 761036 | c.1230G>T | synonymous_variant | 0.18 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.18 |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.19 |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.19 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.22 |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.16 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.18 |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.15 |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.16 |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.19 |
rpoB | 761669 | c.1863C>T | synonymous_variant | 0.2 |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.23 |
rpoB | 761711 | c.1905C>G | synonymous_variant | 0.23 |
rpoB | 761717 | c.1911C>G | synonymous_variant | 0.23 |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.23 |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.23 |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.25 |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.25 |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.22 |
rpoB | 761772 | p.His656Ala | missense_variant | 0.22 |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.21 |
rpoB | 761791 | p.Arg662His | missense_variant | 0.19 |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.16 |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.16 |
rpoB | 761969 | c.2163G>A | synonymous_variant | 0.16 |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.22 |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.21 |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.23 |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.22 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.23 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.24 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.24 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.23 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.22 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.25 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.23 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.23 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.21 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.22 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.22 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.21 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.24 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.19 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.19 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.22 |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.2 |
rpoB | 762285 | p.Arg827Cys | missense_variant | 0.8 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.2 |
rpoB | 762296 | c.2490G>C | synonymous_variant | 0.17 |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.16 |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.17 |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.2 |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.2 |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.22 |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.19 |
rpoC | 762407 | c.-963G>A | upstream_gene_variant | 0.22 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.22 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.19 |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.24 |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.21 |
rpoC | 762449 | c.-921C>A | upstream_gene_variant | 0.2 |
rpoC | 762452 | c.-918G>C | upstream_gene_variant | 0.19 |
rpoC | 762470 | c.-900G>C | upstream_gene_variant | 0.19 |
rpoC | 762758 | c.-612G>C | upstream_gene_variant | 0.15 |
rpoB | 762789 | p.Leu995Met | missense_variant | 0.14 |
rpoB | 762795 | p.Asp997Asn | missense_variant | 0.14 |
rpoC | 762836 | c.-534C>T | upstream_gene_variant | 0.15 |
rpoC | 762857 | c.-513C>G | upstream_gene_variant | 0.16 |
rpoC | 762860 | c.-510G>C | upstream_gene_variant | 0.16 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.17 |
rpoC | 762920 | c.-450C>T | upstream_gene_variant | 0.21 |
rpoC | 762929 | c.-441G>T | upstream_gene_variant | 0.21 |
rpoC | 762947 | c.-423C>G | upstream_gene_variant | 0.24 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.23 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.24 |
rpoC | 762995 | c.-375G>T | upstream_gene_variant | 0.21 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.2 |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 0.2 |
rpoC | 763034 | c.-336C>G | upstream_gene_variant | 0.19 |
rpoC | 763040 | c.-330C>G | upstream_gene_variant | 0.15 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.16 |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.16 |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 0.16 |
rpoC | 763166 | c.-204A>G | upstream_gene_variant | 0.16 |
rpoC | 763205 | c.-165G>C | upstream_gene_variant | 0.16 |
rpoC | 763206 | c.-164_-162delAGTinsTCG | upstream_gene_variant | 0.17 |
rpoC | 763238 | c.-132T>C | upstream_gene_variant | 0.15 |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.17 |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.17 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.22 |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.25 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.33 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.31 |
rpoC | 763570 | c.201G>T | synonymous_variant | 0.24 |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.23 |
rpoC | 763576 | c.207C>G | synonymous_variant | 0.23 |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.2 |
rpoC | 763624 | c.255C>G | synonymous_variant | 0.19 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.25 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.21 |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.19 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.18 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.17 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.17 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.17 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.16 |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.17 |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.17 |
rpoC | 763774 | c.405G>C | synonymous_variant | 0.16 |
rpoC | 764140 | c.771C>T | synonymous_variant | 0.17 |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.19 |
rpoC | 764203 | c.834G>T | synonymous_variant | 0.15 |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.15 |
rpoC | 764213 | p.Arg282Lys | missense_variant | 0.15 |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.2 |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.19 |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.19 |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.19 |
rpoC | 764317 | c.948C>G | synonymous_variant | 0.19 |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.2 |
rpoC | 764338 | c.969G>A | synonymous_variant | 0.17 |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.25 |
rpoC | 764383 | c.1014C>G | synonymous_variant | 0.23 |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.24 |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 0.17 |
rpoC | 764419 | c.1050C>G | synonymous_variant | 0.28 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.34 |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.33 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.33 |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.3 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.3 |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.32 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.3 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.33 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.31 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.26 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.26 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.24 |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.21 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.15 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.17 |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.15 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.15 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.17 |
rpoC | 764668 | c.1299C>T | synonymous_variant | 0.23 |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.31 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.33 |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.32 |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.3 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.3 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.33 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.36 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.35 |
rpoC | 764932 | c.1563C>G | synonymous_variant | 0.26 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.26 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.25 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.22 |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.18 |
rpoC | 765007 | c.1638T>G | synonymous_variant | 0.17 |
rpoC | 765008 | c.1639T>C | synonymous_variant | 0.17 |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.16 |
rpoC | 765150 | p.Gly594Glu | missense_variant | 1.0 |
rpoC | 765370 | c.2001G>T | synonymous_variant | 0.16 |
rpoC | 765371 | c.2002C>T | synonymous_variant | 0.16 |
rpoC | 765379 | c.2010G>T | synonymous_variant | 0.17 |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.18 |
rpoC | 765394 | c.2025G>A | synonymous_variant | 0.2 |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.2 |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.19 |
rpoC | 765412 | c.2043T>C | synonymous_variant | 0.2 |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.16 |
rpoC | 765466 | c.2097C>T | synonymous_variant | 0.18 |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.19 |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.17 |
rpoC | 765508 | c.2139C>G | synonymous_variant | 0.22 |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.23 |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.23 |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.28 |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.28 |
rpoC | 765562 | c.2193G>C | synonymous_variant | 0.29 |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.28 |
rpoC | 765583 | c.2214G>C | synonymous_variant | 0.25 |
rpoC | 765613 | p.His748Gln | missense_variant | 0.3 |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.3 |
rpoC | 765628 | c.2259G>C | synonymous_variant | 0.31 |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.3 |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.26 |
rpoC | 765688 | c.2319G>A | synonymous_variant | 0.28 |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.25 |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.24 |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.27 |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.3 |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.29 |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.25 |
rpoC | 765778 | c.2409C>G | synonymous_variant | 0.27 |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.27 |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.28 |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.28 |
rpoC | 765811 | c.2442T>G | synonymous_variant | 0.25 |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.22 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.18 |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.16 |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.18 |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.18 |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.2 |
rpoC | 766000 | c.2631G>T | synonymous_variant | 0.17 |
rpoC | 766009 | c.2640G>C | synonymous_variant | 0.17 |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.17 |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.14 |
rpoC | 766270 | c.2901G>A | synonymous_variant | 0.13 |
rpoC | 766274 | p.Ala969Thr | missense_variant | 0.13 |
rpoC | 766294 | c.2925C>T | synonymous_variant | 0.17 |
rpoC | 766303 | c.2934C>T | synonymous_variant | 0.17 |
rpoC | 766312 | c.2943T>G | synonymous_variant | 0.19 |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.21 |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.21 |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.16 |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.16 |
rpoC | 766366 | c.2997C>G | synonymous_variant | 0.16 |
rpoC | 766369 | c.3000C>G | synonymous_variant | 0.16 |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.17 |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.17 |
rpoC | 766387 | c.3018C>G | synonymous_variant | 0.18 |
rpoC | 766390 | c.3021C>T | synonymous_variant | 0.16 |
rpoC | 766408 | c.3039C>T | synonymous_variant | 0.14 |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.16 |
rpoC | 766583 | p.Gly1072Ser | missense_variant | 0.16 |
rpoC | 766588 | c.3219G>A | synonymous_variant | 0.16 |
rpoC | 766591 | c.3222A>G | synonymous_variant | 0.16 |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.19 |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.19 |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.22 |
rpoC | 766630 | c.3261G>T | synonymous_variant | 0.17 |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.21 |
rpoC | 766666 | c.3297C>G | synonymous_variant | 0.21 |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.23 |
rpoC | 766693 | c.3324C>T | synonymous_variant | 0.21 |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.17 |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.17 |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.17 |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.25 |
rpoC | 766801 | c.3432C>A | synonymous_variant | 0.24 |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.25 |
rpoC | 766861 | c.3492G>C | synonymous_variant | 0.29 |
rpoC | 766864 | c.3495G>C | synonymous_variant | 0.29 |
rpoC | 766894 | c.3525T>C | synonymous_variant | 0.36 |
rpoC | 766895 | c.3526T>C | synonymous_variant | 0.34 |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.33 |
rpoC | 766918 | c.3549C>T | synonymous_variant | 0.32 |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.28 |
rpoC | 766945 | c.3576A>G | synonymous_variant | 0.27 |
rpoC | 766951 | c.3582G>C | synonymous_variant | 0.25 |
rpoC | 766963 | c.3594T>C | synonymous_variant | 0.29 |
rpoC | 766978 | c.3609C>A | synonymous_variant | 0.3 |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.28 |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 0.29 |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.25 |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.26 |
rpoC | 767065 | c.3696G>T | synonymous_variant | 0.28 |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.23 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.24 |
rpoC | 767134 | c.3765C>A | synonymous_variant | 0.23 |
rpoC | 767167 | c.3798C>G | synonymous_variant | 0.21 |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.19 |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.18 |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.18 |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.18 |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.17 |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.17 |
rpoC | 767233 | c.3864T>C | synonymous_variant | 0.15 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781435 | c.-125G>C | upstream_gene_variant | 1.0 |
rpsL | 781679 | c.120C>T | synonymous_variant | 0.19 |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.19 |
rpsL | 781712 | c.153G>A | synonymous_variant | 0.19 |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.19 |
rpsL | 781718 | c.159C>A | synonymous_variant | 0.19 |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.21 |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.22 |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.23 |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.25 |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.25 |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.25 |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.25 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.25 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.26 |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.27 |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.28 |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.24 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.23 |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.23 |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.17 |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.15 |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.14 |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.15 |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.14 |
fbiC | 1303539 | c.609G>A | synonymous_variant | 0.13 |
fbiC | 1304817 | c.1887T>C | synonymous_variant | 0.17 |
fbiC | 1304832 | c.1902C>G | synonymous_variant | 0.18 |
fbiC | 1304853 | c.1923C>T | synonymous_variant | 0.17 |
fbiC | 1304856 | c.1926C>G | synonymous_variant | 0.17 |
fbiC | 1304869 | c.1939C>T | synonymous_variant | 0.2 |
fbiC | 1304880 | c.1950C>T | synonymous_variant | 0.18 |
fbiC | 1304893 | p.Gly655Ser | missense_variant | 0.18 |
atpE | 1461086 | c.42A>C | synonymous_variant | 0.14 |
atpE | 1461097 | p.Ala18Gly | missense_variant | 0.19 |
atpE | 1461101 | c.57T>C | synonymous_variant | 0.22 |
atpE | 1461107 | c.63C>G | synonymous_variant | 0.25 |
atpE | 1461119 | c.75T>C | synonymous_variant | 0.26 |
atpE | 1461132 | p.Val30Ile | missense_variant | 0.28 |
atpE | 1461149 | c.105T>G | synonymous_variant | 0.26 |
atpE | 1461150 | p.Ile36Val | missense_variant | 0.26 |
atpE | 1461155 | c.111C>G | synonymous_variant | 0.26 |
atpE | 1461159 | p.Val39Ile | missense_variant | 0.26 |
atpE | 1461182 | c.138A>G | synonymous_variant | 0.23 |
atpE | 1461185 | c.141G>C | synonymous_variant | 0.23 |
atpE | 1461197 | c.153A>G | synonymous_variant | 0.21 |
atpE | 1461212 | c.168C>G | synonymous_variant | 0.2 |
atpE | 1461219 | c.175T>C | synonymous_variant | 0.2 |
atpE | 1461224 | c.180T>C | synonymous_variant | 0.18 |
atpE | 1461233 | c.189A>C | synonymous_variant | 0.18 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471969 | n.124T>C | non_coding_transcript_exon_variant | 0.16 |
rrs | 1471970 | n.125G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472028 | n.183A>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472029 | n.184C>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472030 | n.185G>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472031 | n.186G>A | non_coding_transcript_exon_variant | 0.24 |
rrs | 1472034 | n.189T>C | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472044 | n.199G>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472300 | n.455C>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.26 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.16 |
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.16 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.21 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1473288 | n.1443C>T | non_coding_transcript_exon_variant | 0.24 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.24 |
rrs | 1473291 | n.1446G>T | non_coding_transcript_exon_variant | 0.24 |
rrl | 1473668 | n.11C>T | non_coding_transcript_exon_variant | 0.12 |
rrl | 1473756 | n.99G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.24 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1473831 | n.174G>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473839 | n.182G>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.32 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473899 | n.242A>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473944 | n.287G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1473966 | n.309T>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1473971 | n.314G>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474012 | n.355C>T | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474036 | n.379G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1474054 | n.397T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474093 | n.436G>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474111 | n.454T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1474823 | n.1166C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474904 | n.1247G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474956 | n.1299C>T | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474961 | n.1304T>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474963 | n.1306G>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474964 | n.1307T>C | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474970 | n.1313G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475006 | n.1349A>T | non_coding_transcript_exon_variant | 0.39 |
rrl | 1475013 | n.1356G>A | non_coding_transcript_exon_variant | 0.39 |
rrl | 1475028 | n.1371G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475088 | n.1431A>T | non_coding_transcript_exon_variant | 0.27 |
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475201 | n.1544G>A | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475267 | n.1610G>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.24 |
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.27 |
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.35 |
rrl | 1475333 | n.1676T>C | non_coding_transcript_exon_variant | 0.34 |
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.34 |
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475409 | n.1752T>C | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475446 | n.1789G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1475608 | n.1951T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1475638 | n.1981C>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475659 | n.2002G>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1475765 | n.2111delG | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.24 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.19 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.23 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.2 |
inhA | 1674486 | c.285T>C | synonymous_variant | 0.16 |
inhA | 1674489 | c.288G>T | synonymous_variant | 0.15 |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.21 |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.17 |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.17 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.17 |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.17 |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.18 |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.15 |
rpsA | 1833835 | c.294C>T | synonymous_variant | 0.19 |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.19 |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.19 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.18 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.19 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.19 |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.21 |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.21 |
rpsA | 1833976 | c.435C>T | synonymous_variant | 0.18 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.17 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.18 |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.18 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.16 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.16 |
rpsA | 1834345 | c.804C>T | synonymous_variant | 0.15 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.17 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.17 |
rpsA | 1834369 | c.828C>G | synonymous_variant | 0.18 |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.18 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.19 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.2 |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.21 |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.25 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.29 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.28 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.28 |
rpsA | 1834477 | c.936C>T | synonymous_variant | 0.29 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.25 |
rpsA | 1834495 | c.954G>A | synonymous_variant | 0.24 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.24 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.29 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.25 |
rpsA | 1834558 | c.1017C>G | synonymous_variant | 0.26 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.17 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.19 |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.18 |
rpsA | 1834654 | p.Glu371Asp | missense_variant | 0.17 |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.19 |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.17 |
rpsA | 1834733 | p.Ala398Ser | missense_variant | 0.15 |
rpsA | 1834738 | c.1197A>G | synonymous_variant | 0.17 |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.17 |
rpsA | 1834759 | c.1218A>C | synonymous_variant | 0.18 |
rpsA | 1834775 | p.Ala412Asn | missense_variant | 0.16 |
rpsA | 1834789 | c.1248T>C | synonymous_variant | 0.16 |
rpsA | 1834792 | c.1251G>C | synonymous_variant | 0.16 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
tlyA | 1918029 | c.90C>G | synonymous_variant | 0.15 |
tlyA | 1918036 | p.Arg33Ser | missense_variant | 0.17 |
kasA | 2517917 | c.-198G>T | upstream_gene_variant | 0.16 |
kasA | 2518483 | c.369C>T | synonymous_variant | 0.15 |
kasA | 2518488 | p.Ser125Thr | missense_variant | 0.17 |
kasA | 2518504 | c.390T>C | synonymous_variant | 0.17 |
kasA | 2518506 | p.Ala131Glu | missense_variant | 0.17 |
kasA | 2518510 | c.396C>T | synonymous_variant | 0.17 |
kasA | 2518519 | c.405G>C | synonymous_variant | 0.17 |
kasA | 2518528 | c.414C>G | synonymous_variant | 0.19 |
kasA | 2518534 | c.420G>C | synonymous_variant | 0.2 |
kasA | 2518561 | c.447T>C | synonymous_variant | 0.16 |
kasA | 2518574 | p.Ile154Val | missense_variant | 0.18 |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.17 |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.18 |
kasA | 2518591 | c.477G>C | synonymous_variant | 0.18 |
kasA | 2518606 | c.492G>C | synonymous_variant | 0.2 |
kasA | 2518609 | p.Met165Ile | missense_variant | 0.21 |
kasA | 2518618 | c.504G>T | synonymous_variant | 0.19 |
kasA | 2518621 | c.507G>C | synonymous_variant | 0.2 |
kasA | 2518627 | c.513T>C | synonymous_variant | 0.18 |
kasA | 2518636 | c.522C>T | synonymous_variant | 0.21 |
kasA | 2518642 | c.528A>G | synonymous_variant | 0.21 |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.18 |
kasA | 2518678 | c.564C>T | synonymous_variant | 0.19 |
kasA | 2518684 | c.570C>G | synonymous_variant | 0.15 |
kasA | 2518688 | p.Val192Phe | missense_variant | 0.16 |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.15 |
kasA | 2518705 | c.591T>G | synonymous_variant | 0.18 |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.2 |
kasA | 2518714 | c.600A>C | synonymous_variant | 0.18 |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.28 |
kasA | 2518768 | c.654C>G | synonymous_variant | 0.28 |
kasA | 2518783 | c.669T>C | synonymous_variant | 0.27 |
kasA | 2518789 | c.675G>C | synonymous_variant | 0.24 |
kasA | 2518792 | c.678C>A | synonymous_variant | 0.23 |
kasA | 2518795 | c.681C>G | synonymous_variant | 0.21 |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.19 |
kasA | 2518834 | c.720C>T | synonymous_variant | 0.17 |
kasA | 2518837 | c.723G>A | synonymous_variant | 0.17 |
kasA | 2518846 | c.732G>C | synonymous_variant | 0.17 |
kasA | 2518853 | p.Leu247Ile | missense_variant | 0.16 |
folC | 2746353 | p.Ala416Ser | missense_variant | 0.14 |
folC | 2746369 | c.1230G>A | synonymous_variant | 0.14 |
folC | 2747355 | p.Val82Ile | missense_variant | 0.14 |
folC | 2747394 | p.Ile69Val | missense_variant | 0.15 |
folC | 2747407 | c.192T>C | synonymous_variant | 0.14 |
thyA | 3073839 | c.633T>C | synonymous_variant | 0.15 |
thyA | 3073860 | c.612C>G | synonymous_variant | 0.15 |
thyA | 3073863 | c.609T>C | synonymous_variant | 0.15 |
thyA | 3073866 | c.606C>G | synonymous_variant | 0.15 |
thyA | 3073872 | p.Ile200Met | missense_variant | 0.15 |
thyA | 3073889 | p.Ser195Ala | missense_variant | 0.16 |
thyA | 3073890 | p.Leu194Phe | missense_variant | 0.16 |
thyA | 3073898 | p.Ala192Ser | missense_variant | 0.16 |
thyA | 3073917 | c.555C>G | synonymous_variant | 0.15 |
thyA | 3073920 | c.552C>G | synonymous_variant | 0.15 |
thyA | 3073925 | c.547T>C | synonymous_variant | 0.18 |
thyA | 3073959 | c.513T>C | synonymous_variant | 0.15 |
thyA | 3073968 | c.504C>G | synonymous_variant | 0.17 |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.15 |
thyA | 3074001 | c.471C>G | synonymous_variant | 0.14 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
ddn | 3986648 | c.-196C>G | upstream_gene_variant | 0.17 |
ddn | 3986665 | c.-179G>C | upstream_gene_variant | 0.14 |
panD | 4044150 | c.132A>C | synonymous_variant | 0.14 |
panD | 4044159 | c.123C>G | synonymous_variant | 0.17 |
panD | 4044162 | c.120A>G | synonymous_variant | 0.16 |
panD | 4044165 | c.117G>C | synonymous_variant | 0.17 |
panD | 4044174 | c.108C>G | synonymous_variant | 0.15 |
panD | 4044177 | c.105C>G | synonymous_variant | 0.15 |
panD | 4044188 | c.94T>C | synonymous_variant | 0.16 |
panD | 4044189 | c.93C>T | synonymous_variant | 0.16 |
panD | 4044195 | c.87T>C | synonymous_variant | 0.17 |
embC | 4240151 | p.Ser97Pro | missense_variant | 0.14 |
embC | 4240154 | p.Gln98Gly | missense_variant | 0.15 |
embC | 4240160 | p.Thr100Ala | missense_variant | 0.16 |
embC | 4240178 | c.316T>C | synonymous_variant | 0.22 |
embC | 4240183 | c.321A>G | synonymous_variant | 0.21 |
embC | 4240219 | c.357C>G | synonymous_variant | 0.15 |
embC | 4240222 | c.360G>A | synonymous_variant | 0.15 |
embC | 4240229 | p.Leu123Met | missense_variant | 0.14 |
embC | 4240657 | c.795G>C | synonymous_variant | 0.18 |
embC | 4240671 | p.Thr270Ile | missense_variant | 0.14 |
embC | 4240685 | p.Thr275Ala | missense_variant | 0.14 |
embC | 4240698 | p.Ala279Gly | missense_variant | 0.14 |
embC | 4240707 | p.Val282Ala | missense_variant | 0.16 |
embC | 4240726 | c.864G>C | synonymous_variant | 0.21 |
embC | 4240780 | c.918T>C | synonymous_variant | 0.19 |
embC | 4240783 | c.921G>C | synonymous_variant | 0.19 |
embC | 4240789 | c.927T>C | synonymous_variant | 0.18 |
embC | 4240798 | c.936C>T | synonymous_variant | 0.19 |
embC | 4240813 | p.Phe317Leu | missense_variant | 0.16 |
embC | 4240819 | c.957A>G | synonymous_variant | 0.17 |
embC | 4240831 | c.969T>G | synonymous_variant | 0.16 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embC | 4242803 | p.Val981Leu | missense_variant | 1.0 |
embA | 4245044 | c.1812G>C | synonymous_variant | 0.15 |
embA | 4245056 | c.1824C>G | synonymous_variant | 0.19 |
embA | 4245060 | c.1828T>C | synonymous_variant | 0.18 |
embA | 4245065 | c.1833G>A | synonymous_variant | 0.18 |
embA | 4245078 | p.Trp616Val | missense_variant | 0.16 |
embA | 4245083 | c.1851A>G | synonymous_variant | 0.17 |
embA | 4245089 | c.1857G>C | synonymous_variant | 0.18 |
embA | 4245093 | p.Ile621Val | missense_variant | 0.21 |
embA | 4245101 | c.1869G>C | synonymous_variant | 0.24 |
embA | 4245137 | c.1905T>C | synonymous_variant | 0.3 |
embA | 4245149 | c.1917C>G | synonymous_variant | 0.29 |
embA | 4245182 | c.1950T>C | synonymous_variant | 0.26 |
embA | 4245186 | p.Thr652Ala | missense_variant | 0.25 |
embA | 4245198 | p.Leu656Ala | missense_variant | 0.26 |
embA | 4245206 | c.1974A>C | synonymous_variant | 0.24 |
embA | 4245207 | c.1975T>C | synonymous_variant | 0.24 |
embA | 4245215 | c.1983A>C | synonymous_variant | 0.24 |
embA | 4245222 | p.Tyr664Gln | missense_variant | 0.23 |
embA | 4245245 | c.2013C>A | synonymous_variant | 0.19 |
embA | 4245461 | c.2229C>G | synonymous_variant | 0.15 |
embB | 4245726 | c.-788T>C | upstream_gene_variant | 0.18 |
embB | 4245737 | c.-777A>C | upstream_gene_variant | 0.18 |
embB | 4245740 | c.-774T>C | upstream_gene_variant | 0.18 |
embB | 4245743 | c.-771C>G | upstream_gene_variant | 0.18 |
embB | 4245764 | c.-750G>C | upstream_gene_variant | 0.17 |
embB | 4245770 | c.-744C>T | upstream_gene_variant | 0.18 |
embA | 4245771 | p.Asn847Ser | missense_variant | 0.18 |
embB | 4245797 | c.-717C>G | upstream_gene_variant | 0.15 |
embB | 4246331 | c.-183C>T | upstream_gene_variant | 0.14 |
embA | 4246338 | p.Leu1036Met | missense_variant | 0.15 |
embB | 4247428 | c.915C>T | synonymous_variant | 0.2 |
embB | 4247434 | c.921C>G | synonymous_variant | 0.22 |
embB | 4247437 | c.924A>G | synonymous_variant | 0.25 |
embB | 4247446 | c.933C>T | synonymous_variant | 0.24 |
embB | 4247464 | c.951C>G | synonymous_variant | 0.21 |
embB | 4247470 | c.957T>C | synonymous_variant | 0.2 |
embB | 4247485 | c.972C>T | synonymous_variant | 0.22 |
embB | 4247491 | c.978G>C | synonymous_variant | 0.2 |
embB | 4247497 | c.984T>C | synonymous_variant | 0.22 |
embB | 4247512 | c.999T>C | synonymous_variant | 0.22 |
embB | 4247544 | p.Ser344Thr | missense_variant | 0.2 |
embB | 4247554 | c.1041T>C | synonymous_variant | 0.18 |
embB | 4248001 | c.1488C>T | synonymous_variant | 0.21 |
embB | 4248007 | c.1494C>G | synonymous_variant | 0.2 |
embB | 4248008 | c.1495C>T | synonymous_variant | 0.2 |
embB | 4248035 | p.Val508Ile | missense_variant | 0.17 |
embB | 4248041 | p.Ala510Thr | missense_variant | 0.17 |
embB | 4248044 | p.Lys511Ser | missense_variant | 0.18 |
embB | 4248052 | c.1539G>C | synonymous_variant | 0.19 |
embB | 4248055 | c.1542G>C | synonymous_variant | 0.18 |
embB | 4248064 | c.1551G>C | synonymous_variant | 0.2 |
embB | 4248070 | c.1557T>C | synonymous_variant | 0.18 |
embB | 4248085 | c.1572T>C | synonymous_variant | 0.17 |
embB | 4248097 | c.1584C>G | synonymous_variant | 0.21 |
embB | 4248118 | c.1605T>A | synonymous_variant | 0.21 |
embB | 4248130 | c.1617G>C | synonymous_variant | 0.22 |
embB | 4248139 | c.1626C>G | synonymous_variant | 0.23 |
embB | 4248149 | p.Thr546Ala | missense_variant | 0.21 |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.18 |
embB | 4248160 | c.1647C>T | synonymous_variant | 0.18 |
embB | 4248169 | c.1656C>A | synonymous_variant | 0.18 |
embB | 4248172 | c.1659G>C | synonymous_variant | 0.16 |
embB | 4248175 | c.1662G>C | synonymous_variant | 0.16 |
embB | 4248178 | c.1665C>T | synonymous_variant | 0.15 |
embB | 4248181 | c.1668C>T | synonymous_variant | 0.15 |
embB | 4248206 | p.Ser565Gly | missense_variant | 0.16 |
embB | 4248214 | c.1701C>A | synonymous_variant | 0.17 |
embB | 4248220 | c.1707A>G | synonymous_variant | 0.19 |
embB | 4248226 | c.1713G>C | synonymous_variant | 0.18 |
embB | 4249408 | c.2895G>A | synonymous_variant | 1.0 |
ubiA | 4269132 | c.702G>C | synonymous_variant | 0.15 |
ubiA | 4269141 | p.Leu231Ile | missense_variant | 0.16 |
ubiA | 4269144 | c.690C>G | synonymous_variant | 0.15 |
ubiA | 4269164 | c.670T>C | synonymous_variant | 0.17 |
gid | 4407798 | c.405G>T | synonymous_variant | 1.0 |