Rv3596c - c.1671C>G
Drug resistance types
17 Sensitive
3 RR-TB
15 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 20 |
| lineage4.1.1.3 | 4 |
| La1.7;lineage4.9 | 4 |
| lineage3 | 2 |
| lineage2.2.1 | 4 |
| 2 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.4 | 1 |
| La1.8.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.3.2 | 1 |
| La1.7.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.9;lineage7 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR212001 | HR-TB | None | SRR10808730 | Other | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | ERR387051 | Other | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR7236330 | Other | La1.8.1 | None | SRR5341456 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4798823 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR26399826 | Sensitive | lineage1.1.1.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR212123 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | SRR3675582 | Other | lineage4.9 | None | ERR13265708 | Sensitive | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | SRR12882749 | Sensitive | lineage1.1.1.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None |
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