TB-Profiler result

Run: SRR6045795
Summary

Run ID: SRR6045795

Sample name:

Date: 04-04-2023 12:05:33

Number of reads: 478449

Percentage reads mapped: 35.79

Strain: lineage2.2.1

Drug-resistance: HR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 1.0
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.96
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
katG 2155693 p.Ser140Asn missense_variant 0.46 isoniazid
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6085 c.846C>T synonymous_variant 0.17
gyrB 6086 p.Thr283Pro missense_variant 0.17
gyrB 6091 c.852G>C synonymous_variant 0.33
gyrB 6100 c.861G>C synonymous_variant 0.41
gyrB 6103 c.864G>A synonymous_variant 0.41
gyrB 6109 c.870G>C synonymous_variant 0.39
gyrB 6115 c.876A>G synonymous_variant 0.39
gyrB 6127 c.888G>C synonymous_variant 0.37
gyrB 6130 c.891T>C synonymous_variant 0.35
gyrB 6133 c.894G>C synonymous_variant 0.37
gyrB 6136 c.897G>A synonymous_variant 0.37
gyrB 6154 c.915C>G synonymous_variant 0.47
gyrB 6175 c.936G>A synonymous_variant 0.5
gyrB 6178 c.939C>T synonymous_variant 0.44
gyrB 6196 c.957C>T synonymous_variant 0.41
gyrB 6214 c.975G>C synonymous_variant 0.28
gyrB 6215 p.Ser326Thr missense_variant 0.28
gyrB 6223 c.984G>C synonymous_variant 0.29
gyrA 6673 c.-629A>T upstream_gene_variant 0.25
gyrA 6700 c.-602T>C upstream_gene_variant 0.31
gyrA 6709 c.-593A>G upstream_gene_variant 0.31
gyrA 6712 c.-590G>C upstream_gene_variant 0.18
gyrA 6727 c.-575G>C upstream_gene_variant 0.17
gyrA 6730 c.-572A>G upstream_gene_variant 0.17
gyrA 6745 c.-557T>C upstream_gene_variant 0.2
gyrA 6751 c.-551G>C upstream_gene_variant 0.22
gyrA 6760 c.-542G>C upstream_gene_variant 0.22
gyrA 6766 c.-536G>C upstream_gene_variant 0.22
gyrA 6775 c.-527G>T upstream_gene_variant 0.22
gyrA 6793 c.-509T>C upstream_gene_variant 0.4
gyrB 6798 p.Gly520Ala missense_variant 0.5
gyrA 6802 c.-500G>A upstream_gene_variant 0.4
gyrA 6808 c.-494C>A upstream_gene_variant 0.5
gyrA 6811 c.-491C>T upstream_gene_variant 0.4
gyrA 7078 c.-224A>C upstream_gene_variant 0.18
gyrA 7081 c.-221T>C upstream_gene_variant 0.18
gyrA 7084 c.-218A>G upstream_gene_variant 0.2
gyrA 7093 c.-209T>G upstream_gene_variant 0.2
gyrA 7099 c.-203G>A upstream_gene_variant 0.2
gyrA 7100 c.-202T>C upstream_gene_variant 0.2
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7553 c.252C>T synonymous_variant 0.15
gyrA 7569 p.Ala90Ser missense_variant 0.17
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7628 c.327G>T synonymous_variant 0.28
gyrA 7631 c.330G>C synonymous_variant 0.28
gyrA 7658 c.357A>G synonymous_variant 0.26
gyrA 7664 c.363T>C synonymous_variant 0.28
gyrA 7670 c.369A>G synonymous_variant 0.19
gyrA 7676 c.375G>C synonymous_variant 0.19
gyrA 7694 c.393A>G synonymous_variant 0.19
gyrA 7706 c.405C>A synonymous_variant 0.29
gyrA 7710 c.409T>C synonymous_variant 0.29
gyrA 7715 c.414G>C synonymous_variant 0.33
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.39
gyrA 7742 c.441G>A synonymous_variant 0.44
gyrA 7763 c.462T>G synonymous_variant 0.58
gyrA 7775 c.474C>T synonymous_variant 0.57
gyrA 7778 c.477G>C synonymous_variant 0.57
gyrA 7784 c.483A>G synonymous_variant 0.57
gyrA 7793 c.492G>C synonymous_variant 0.52
gyrA 7796 c.495G>C synonymous_variant 0.52
gyrA 7799 c.498A>T synonymous_variant 0.5
gyrA 7832 c.531G>T synonymous_variant 0.48
gyrA 7835 c.534A>G synonymous_variant 0.5
gyrA 7853 c.552C>T synonymous_variant 0.45
gyrA 7859 c.558A>C synonymous_variant 0.45
gyrA 7865 c.564T>C synonymous_variant 0.33
gyrA 7868 p.Ile189Met missense_variant 0.29
gyrA 7883 c.582G>C synonymous_variant 0.23
gyrA 7886 c.585T>C synonymous_variant 0.23
gyrA 8285 c.984C>A synonymous_variant 0.15
gyrA 8345 c.1044C>A synonymous_variant 0.17
gyrA 8431 p.Thr377Asn missense_variant 0.2
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.33
gyrA 9104 c.1803C>G synonymous_variant 0.43
gyrA 9113 c.1812C>G synonymous_variant 0.38
gyrA 9119 c.1818A>G synonymous_variant 0.38
gyrA 9141 p.Ile614Leu missense_variant 0.29
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9345 c.2044_2046delAGGinsCGT synonymous_variant 0.22
gyrA 9377 c.2076A>G synonymous_variant 0.36
gyrA 9383 c.2082T>G synonymous_variant 0.33
gyrA 9386 c.2085T>C synonymous_variant 0.32
gyrA 9395 c.2094G>C synonymous_variant 0.29
gyrA 9398 c.2097T>C synonymous_variant 0.29
gyrA 9419 c.2118T>C synonymous_variant 0.27
gyrA 9420 p.Ile707Glu missense_variant 0.26
gyrA 9425 p.Asp708Glu missense_variant 0.26
gyrA 9430 p.Arg710Gln missense_variant 0.26
gyrA 9452 c.2151G>C synonymous_variant 0.24
gyrA 9455 c.2154T>C synonymous_variant 0.24
gyrA 9464 c.2163C>G synonymous_variant 0.21
gyrA 9468 c.2167C>T synonymous_variant 0.21
gyrA 9476 c.2175G>C synonymous_variant 0.23
gyrA 9485 c.2184A>C synonymous_variant 0.23
gyrA 9488 c.2187G>T synonymous_variant 0.2
gyrA 9494 c.2193T>C synonymous_variant 0.18
gyrA 9497 c.2196G>C synonymous_variant 0.18
gyrA 9500 c.2199A>G synonymous_variant 0.18
gyrA 9503 c.2202T>C synonymous_variant 0.18
fgd1 490875 c.93C>G synonymous_variant 0.19
fgd1 490884 c.102C>T synonymous_variant 0.28
fgd1 490896 c.114C>T synonymous_variant 0.32
fgd1 490899 c.117C>T synonymous_variant 0.32
fgd1 490911 c.129T>G synonymous_variant 0.42
fgd1 490921 p.Gln47Glu missense_variant 0.5
fgd1 490948 p.Ser56Ala missense_variant 0.52
fgd1 490962 c.180T>C synonymous_variant 0.55
fgd1 490971 c.189A>G synonymous_variant 0.48
fgd1 490974 c.192T>C synonymous_variant 0.48
fgd1 490978 p.Asn66Glu missense_variant 0.48
fgd1 490983 c.201G>A synonymous_variant 0.53
fgd1 490987 p.Leu69Ile missense_variant 0.53
fgd1 490998 c.216T>C synonymous_variant 0.55
fgd1 491013 c.231C>G synonymous_variant 0.57
fgd1 491016 c.234C>G synonymous_variant 0.52
fgd1 491031 c.249C>G synonymous_variant 0.48
fgd1 491037 c.255C>G synonymous_variant 0.44
fgd1 491043 c.261T>G synonymous_variant 0.41
fgd1 491049 c.267T>G synonymous_variant 0.44
fgd1 491067 c.285C>T synonymous_variant 0.26
fgd1 491077 p.Asn99Asp missense_variant 0.25
fgd1 491082 c.300T>C synonymous_variant 0.24
fgd1 491083 p.Val101Ile missense_variant 0.24
fgd1 491091 c.309T>G synonymous_variant 0.24
fgd1 491094 c.312C>T synonymous_variant 0.33
fgd1 491115 c.333G>C synonymous_variant 0.45
fgd1 491121 c.339A>G synonymous_variant 0.45
fgd1 491133 c.351A>G synonymous_variant 0.4
fgd1 491142 c.360C>G synonymous_variant 0.36
fgd1 491144 p.Ala121Glu missense_variant 0.36
fgd1 491172 c.390C>G synonymous_variant 0.16
fgd1 491354 p.Gly191Asp missense_variant 0.18
fgd1 491472 c.690A>G synonymous_variant 0.27
fgd1 491491 p.Pro237Thr missense_variant 0.27
fgd1 491496 c.714C>T synonymous_variant 0.27
fgd1 491505 c.723G>C synonymous_variant 0.43
fgd1 491508 c.726A>G synonymous_variant 0.43
fgd1 491509 c.727T>C synonymous_variant 0.43
fgd1 491512 p.Asn244Glu missense_variant 0.5
fgd1 491526 c.744T>C synonymous_variant 0.5
fgd1 491536 c.754C>T synonymous_variant 0.43
fgd1 491542 c.760T>C synonymous_variant 0.38
fgd1 491547 c.765A>C synonymous_variant 0.43
fgd1 491550 c.768T>C synonymous_variant 0.5
fgd1 491563 c.781_782delAGinsTC synonymous_variant 0.43
fgd1 491601 c.819T>C synonymous_variant 0.6
fgd1 491610 c.828A>C synonymous_variant 0.29
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575752 c.405G>C synonymous_variant 0.19
mshA 575755 c.408G>C synonymous_variant 0.23
mshA 575770 c.423G>C synonymous_variant 0.25
mshA 575771 p.Val142Thr missense_variant 0.26
mshA 575779 c.432A>G synonymous_variant 0.26
mshA 575782 c.435G>C synonymous_variant 0.26
mshA 575785 c.438T>C synonymous_variant 0.28
mshA 575803 c.456C>T synonymous_variant 0.33
mshA 575821 c.474G>C synonymous_variant 0.47
mshA 575824 c.477T>G synonymous_variant 0.47
mshA 575833 c.486C>A synonymous_variant 0.5
mshA 575842 c.495G>C synonymous_variant 0.5
mshA 575843 p.Arg166Ala missense_variant 0.5
mshA 575864 c.517T>C synonymous_variant 0.47
mshA 575878 c.531A>G synonymous_variant 0.36
mshA 575884 c.537G>C synonymous_variant 0.38
mshA 575887 c.540G>T synonymous_variant 0.36
mshA 575893 c.546C>G synonymous_variant 0.31
mshA 575907 p.Ala187Val missense_variant 1.0
mshA 575999 p.Asp218Asn missense_variant 0.29
mshA 576613 c.1266A>G synonymous_variant 0.29
ccsA 620173 p.Val95Ile missense_variant 0.17
ccsA 620625 p.Ile245Met missense_variant 1.0
rpoB 760064 c.258G>A synonymous_variant 0.14
rpoB 760082 c.276C>T synonymous_variant 0.18
rpoB 760091 c.285G>C synonymous_variant 0.18
rpoB 760104 c.298_300delTCGinsAGC synonymous_variant 0.17
rpoB 760112 c.306T>G synonymous_variant 0.36
rpoB 760118 c.312T>G synonymous_variant 0.36
rpoB 760121 c.315T>C synonymous_variant 0.39
rpoB 760130 p.Asp108Glu missense_variant 0.44
rpoB 760139 c.333A>G synonymous_variant 0.46
rpoB 760142 c.336C>G synonymous_variant 0.48
rpoB 760145 c.339C>G synonymous_variant 0.48
rpoB 760181 c.375T>C synonymous_variant 0.64
rpoB 760184 c.378A>G synonymous_variant 0.64
rpoB 760196 c.390C>G synonymous_variant 0.59
rpoB 760235 c.429T>C synonymous_variant 0.54
rpoB 760244 c.438G>C synonymous_variant 0.42
rpoB 760283 c.477G>C synonymous_variant 0.29
rpoB 760298 c.492G>C synonymous_variant 0.25
rpoB 760310 c.504G>C synonymous_variant 0.18
rpoB 760381 c.576delG frameshift_variant 0.15
rpoB 760400 c.594G>C synonymous_variant 0.31
rpoB 760407 p.Ser201Gly missense_variant 0.29
rpoB 760415 c.609C>T synonymous_variant 0.41
rpoB 760424 c.618C>G synonymous_variant 0.44
rpoB 760430 c.624T>C synonymous_variant 0.44
rpoB 760460 c.654G>C synonymous_variant 0.47
rpoB 760475 c.669A>G synonymous_variant 0.53
rpoB 760481 c.675G>C synonymous_variant 0.48
rpoB 760484 c.678A>G synonymous_variant 0.43
rpoB 760502 c.696C>G synonymous_variant 0.48
rpoB 760511 c.705G>C synonymous_variant 0.55
rpoB 760522 p.Ser239Asn missense_variant 0.57
rpoB 760532 c.726T>C synonymous_variant 0.5
rpoB 760533 p.Val243Thr missense_variant 0.5
rpoB 760541 c.735G>C synonymous_variant 0.54
rpoB 760547 c.741G>C synonymous_variant 0.54
rpoB 760561 c.757_758delCG frameshift_variant 0.46
rpoB 760567 p.Ser254Trp missense_variant 0.46
rpoB 760568 c.762_763insGC frameshift_variant 0.48
rpoB 760591 p.Val262Ala missense_variant 0.65
rpoB 760595 c.789C>A synonymous_variant 0.64
rpoB 760601 c.795C>T synonymous_variant 0.62
rpoB 760611 c.805T>C synonymous_variant 0.59
rpoB 760625 c.819C>G synonymous_variant 0.58
rpoB 760634 c.828T>C synonymous_variant 0.61
rpoB 760646 c.840C>G synonymous_variant 0.55
rpoB 760655 c.849A>G synonymous_variant 0.54
rpoB 760661 c.855A>C synonymous_variant 0.42
rpoB 760670 c.864G>C synonymous_variant 0.31
rpoB 760674 c.868T>C synonymous_variant 0.31
rpoB 760679 c.873A>G synonymous_variant 0.28
rpoB 760683 c.877T>C synonymous_variant 0.28
rpoB 760715 c.909C>T synonymous_variant 0.21
rpoB 760724 c.918T>C synonymous_variant 0.19
rpoB 760796 c.990A>G synonymous_variant 0.2
rpoB 760805 c.999G>C synonymous_variant 0.22
rpoB 760808 c.1002C>G synonymous_variant 0.22
rpoB 760811 c.1005C>G synonymous_variant 0.22
rpoB 760817 c.1011A>G synonymous_variant 0.25
rpoB 760820 c.1014T>C synonymous_variant 0.25
rpoB 760826 c.1020C>G synonymous_variant 0.25
rpoB 760829 c.1023C>T synonymous_variant 0.29
rpoB 760830 c.1024T>C synonymous_variant 0.29
rpoB 760841 c.1035T>C synonymous_variant 0.25
rpoB 760848 p.Thr348Ser missense_variant 0.22
rpoB 760858 p.Val351Ala missense_variant 0.2
rpoB 760862 c.1056G>C synonymous_variant 0.2
rpoB 760865 c.1059C>T synonymous_variant 0.22
rpoB 760874 c.1068G>A synonymous_variant 0.29
rpoB 760880 c.1074G>C synonymous_variant 0.29
rpoB 760883 c.1077G>C synonymous_variant 0.33
rpoB 760886 c.1080A>G synonymous_variant 0.33
rpoB 760887 p.Thr361Val missense_variant 0.33
rpoB 760916 c.1110C>T synonymous_variant 0.36
rpoB 760919 c.1113C>T synonymous_variant 0.36
rpoB 760928 c.1122G>C synonymous_variant 0.3
rpoB 760931 c.1125C>G synonymous_variant 0.2
rpoB 760946 c.1140A>G synonymous_variant 0.2
rpoB 760965 p.Met387Leu missense_variant 0.31
rpoB 760973 c.1167G>C synonymous_variant 0.38
rpoB 760982 c.1176G>T synonymous_variant 0.36
rpoB 760985 c.1179G>C synonymous_variant 0.31
rpoB 760988 c.1182C>G synonymous_variant 0.36
rpoB 760991 c.1185G>T synonymous_variant 0.36
rpoB 760997 c.1191G>C synonymous_variant 0.38
rpoB 761003 c.1197C>G synonymous_variant 0.38
rpoB 761015 c.1209G>C synonymous_variant 0.36
rpoB 761027 c.1221A>G synonymous_variant 0.46
rpoB 761036 c.1230G>C synonymous_variant 0.5
rpoB 761037 c.1231T>C synonymous_variant 0.5
rpoB 761051 c.1245G>T synonymous_variant 0.45
rpoB 761054 c.1248G>C synonymous_variant 0.45
rpoB 761057 c.1251G>C synonymous_variant 0.45
rpoB 761060 c.1254C>G synonymous_variant 0.45
rpoB 761063 c.1257C>G synonymous_variant 0.5
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.39
rpoB 761102 c.1296A>G synonymous_variant 0.39
rpoB 761132 c.1326G>T synonymous_variant 0.3
rpoB 761133 c.1327T>C synonymous_variant 0.32
rpoB 761150 c.1344A>C synonymous_variant 0.35
rpoB 761165 c.1359G>C synonymous_variant 0.33
rpoB 761180 c.1374A>C synonymous_variant 0.2
rpoB 761195 c.1389G>C synonymous_variant 0.19
rpoB 761198 c.1392G>C synonymous_variant 0.25
rpoB 761217 p.Pro471Ser missense_variant 0.16
rpoB 761220 p.Ser472Thr missense_variant 0.16
rpoB 761249 c.1443A>G synonymous_variant 0.24
rpoB 761255 c.1449T>C synonymous_variant 0.24
rpoB 761261 c.1455G>C synonymous_variant 0.26
rpoB 761264 c.1458C>G synonymous_variant 0.26
rpoB 761273 c.1467T>C synonymous_variant 0.27
rpoB 761282 c.1476C>T synonymous_variant 0.29
rpoB 761300 c.1494G>A synonymous_variant 0.42
rpoB 761318 c.1512G>T synonymous_variant 0.4
rpoB 761327 c.1521A>G synonymous_variant 0.36
rpoB 761355 p.Val517Gln missense_variant 0.3
rpoB 761360 c.1554T>C synonymous_variant 0.33
rpoB 761362 p.Ser519Thr missense_variant 0.33
rpoB 761367 p.Glu521Gln missense_variant 0.33
rpoB 761374 p.Val523Asp missense_variant 0.23
rpoB 761406 p.Val534Met missense_variant 0.14
rpoB 761414 c.1608A>G synonymous_variant 0.15
rpoB 761537 c.1731C>G synonymous_variant 0.28
rpoB 761555 c.1749G>C synonymous_variant 0.38
rpoB 761558 c.1752C>G synonymous_variant 0.41
rpoB 761561 c.1755C>G synonymous_variant 0.41
rpoB 761570 c.1764T>C synonymous_variant 0.46
rpoB 761573 c.1767C>G synonymous_variant 0.46
rpoB 761579 c.1773G>C synonymous_variant 0.48
rpoB 761591 c.1785C>T synonymous_variant 0.5
rpoB 761606 c.1800C>G synonymous_variant 0.44
rpoB 761612 c.1806G>T synonymous_variant 0.48
rpoB 761615 c.1809A>C synonymous_variant 0.48
rpoB 761636 c.1830G>T synonymous_variant 0.43
rpoB 761648 c.1842T>C synonymous_variant 0.43
rpoB 761661 c.1855C>T synonymous_variant 0.43
rpoB 761666 c.1860G>C synonymous_variant 0.45
rpoB 761669 c.1863C>T synonymous_variant 0.42
rpoB 761675 c.1869G>T synonymous_variant 0.42
rpoB 761682 c.1876C>T synonymous_variant 0.29
rpoB 761687 c.1881C>T synonymous_variant 0.2
rpoB 761690 c.1884G>C synonymous_variant 0.2
rpoB 761693 c.1887G>C synonymous_variant 0.2
rpoB 761699 c.1893C>T synonymous_variant 0.21
rpoB 761705 c.1899C>T synonymous_variant 0.21
rpoB 761711 c.1905C>G synonymous_variant 0.21
rpoB 761714 c.1908C>T synonymous_variant 0.21
rpoB 761723 p.Glu639Asp missense_variant 0.21
rpoB 761724 p.Glu640Lys missense_variant 0.21
rpoB 761728 p.Ser641Thr missense_variant 0.21
rpoB 761732 c.1926C>T synonymous_variant 0.21
rpoB 761735 c.1929C>G synonymous_variant 0.21
rpoB 761741 c.1935G>A synonymous_variant 0.2
rpoB 761747 c.1941G>T synonymous_variant 0.2
rpoB 761813 c.2007T>C synonymous_variant 0.17
rpoB 761834 c.2028T>G synonymous_variant 0.18
rpoB 761921 c.2115C>T synonymous_variant 0.15
rpoB 761948 c.2142G>C synonymous_variant 0.32
rpoB 761951 c.2145G>C synonymous_variant 0.3
rpoB 761955 p.Ile717Val missense_variant 0.3
rpoB 761972 c.2166C>T synonymous_variant 0.43
rpoB 761984 c.2178G>A synonymous_variant 0.43
rpoB 761999 c.2193G>C synonymous_variant 0.5
rpoB 762004 p.Asn733Ser missense_variant 0.5
rpoB 762008 c.2202C>T synonymous_variant 0.5
rpoB 762038 c.2232C>T synonymous_variant 0.52
rpoB 762053 c.2247T>C synonymous_variant 0.55
rpoB 762062 c.2256T>C synonymous_variant 0.51
rpoB 762065 c.2259T>C synonymous_variant 0.51
rpoB 762083 c.2277T>C synonymous_variant 0.5
rpoB 762086 c.2280G>C synonymous_variant 0.56
rpoB 762101 c.2295C>G synonymous_variant 0.57
rpoB 762114 p.Ile770Val missense_variant 0.48
rpoB 762122 c.2316C>T synonymous_variant 0.56
rpoB 762131 c.2325C>G synonymous_variant 0.67
rpoB 762137 c.2331C>T synonymous_variant 0.65
rpoB 762140 c.2334G>C synonymous_variant 0.65
rpoB 762143 c.2337T>C synonymous_variant 0.65
rpoB 762149 c.2343G>C synonymous_variant 0.69
rpoB 762156 p.Val784Ile missense_variant 0.75
rpoB 762167 c.2361T>C synonymous_variant 0.65
rpoB 762170 c.2364C>A synonymous_variant 0.65
rpoB 762176 c.2370T>C synonymous_variant 0.7
rpoB 762185 c.2379G>C synonymous_variant 0.76
rpoB 762218 c.2412T>C synonymous_variant 0.6
rpoB 762233 c.2427G>C synonymous_variant 0.59
rpoB 762245 c.2439G>C synonymous_variant 0.59
rpoB 762284 c.2478G>C synonymous_variant 0.41
rpoB 762293 c.2487T>G synonymous_variant 0.37
rpoB 762299 c.2493G>C synonymous_variant 0.35
rpoB 762308 c.2502G>C synonymous_variant 0.31
rpoB 762317 c.2511A>G synonymous_variant 0.32
rpoB 762329 c.2523G>C synonymous_variant 0.26
rpoB 762338 c.2532T>C synonymous_variant 0.29
rpoB 762341 c.2535G>C synonymous_variant 0.29
rpoB 762347 c.2541T>C synonymous_variant 0.29
rpoB 762359 c.2553C>T synonymous_variant 0.3
rpoB 762362 p.Glu852Asp missense_variant 0.3
rpoB 762369 c.2563T>C synonymous_variant 0.27
rpoC 762374 c.-996G>C upstream_gene_variant 0.27
rpoC 762380 c.-990T>C upstream_gene_variant 0.18
rpoC 762389 c.-981G>A upstream_gene_variant 0.17
rpoC 762857 c.-513C>G upstream_gene_variant 0.42
rpoC 762863 c.-507T>C upstream_gene_variant 0.33
rpoB 762879 p.Met1025Leu missense_variant 0.5
rpoC 762899 c.-471G>C upstream_gene_variant 0.56
rpoC 762923 c.-447C>G upstream_gene_variant 0.64
rpoC 762929 c.-441G>T upstream_gene_variant 0.67
rpoC 762959 c.-411G>C upstream_gene_variant 0.69
rpoC 762962 c.-408C>T upstream_gene_variant 0.71
rpoC 762983 c.-387C>T upstream_gene_variant 0.55
rpoC 762995 c.-375G>C upstream_gene_variant 0.51
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 0.52
rpoC 763053 c.-317_-315delTTGinsCTC upstream_gene_variant 0.46
rpoC 763070 c.-300T>C upstream_gene_variant 0.47
rpoC 763076 c.-294C>G upstream_gene_variant 0.47
rpoC 763079 c.-291C>G upstream_gene_variant 0.47
rpoC 763082 c.-288C>T upstream_gene_variant 0.47
rpoC 763103 c.-267G>C upstream_gene_variant 0.45
rpoC 763115 c.-255T>C upstream_gene_variant 0.39
rpoC 763127 c.-243G>C upstream_gene_variant 0.44
rpoC 763130 c.-240G>A upstream_gene_variant 0.44
rpoC 763133 c.-237G>C upstream_gene_variant 0.4
rpoC 763136 c.-234C>T upstream_gene_variant 0.44
rpoC 763142 c.-228C>G upstream_gene_variant 0.44
rpoC 763160 c.-210G>T upstream_gene_variant 0.47
rpoC 763166 c.-204A>G upstream_gene_variant 0.44
rpoC 763169 c.-201A>G upstream_gene_variant 0.41
rpoC 763181 c.-189G>C upstream_gene_variant 0.31
rpoC 763187 c.-183C>G upstream_gene_variant 0.31
rpoC 763202 c.-168A>G upstream_gene_variant 0.17
rpoC 763205 c.-165G>T upstream_gene_variant 0.2
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.2
rpoC 763214 c.-156T>C upstream_gene_variant 0.25
rpoC 763226 c.-144A>G upstream_gene_variant 0.29
rpoB 763227 p.Leu1141Met missense_variant 0.29
rpoC 763232 c.-138C>A upstream_gene_variant 0.29
rpoB 763235 p.Glu1143Asp missense_variant 0.29
rpoC 763238 c.-132T>A upstream_gene_variant 0.29
rpoB 763241 p.Glu1145Asp missense_variant 0.29
rpoC 763259 c.-111G>T upstream_gene_variant 0.25
rpoC 763262 c.-108C>T upstream_gene_variant 0.25
rpoC 763265 c.-105G>T upstream_gene_variant 0.25
rpoC 763274 c.-96G>C upstream_gene_variant 0.25
rpoC 763283 c.-87T>C upstream_gene_variant 0.2
rpoC 763289 c.-81C>G upstream_gene_variant 0.2
rpoC 763375 c.6C>A synonymous_variant 0.45
rpoC 763411 c.42T>C synonymous_variant 0.43
rpoC 763414 c.45T>G synonymous_variant 0.43
rpoC 763423 p.Glu18Asp missense_variant 0.43
rpoC 763430 c.61_63delAGGinsCGT synonymous_variant 0.43
rpoC 763433 p.Gln22Asn missense_variant 0.48
rpoC 763443 p.Tyr25Phe missense_variant 0.5
rpoC 763456 c.87A>G synonymous_variant 0.57
rpoC 763468 c.99G>C synonymous_variant 0.62
rpoC 763486 c.117T>C synonymous_variant 0.61
rpoC 763492 c.123G>A synonymous_variant 0.61
rpoC 763528 c.159G>A synonymous_variant 0.74
rpoC 763531 c.162G>T synonymous_variant 0.74
rpoC 763546 c.177A>G synonymous_variant 0.71
rpoC 763570 c.201G>C synonymous_variant 0.63
rpoC 763594 c.225C>T synonymous_variant 0.61
rpoC 763621 c.252C>T synonymous_variant 0.58
rpoC 763633 c.264T>C synonymous_variant 0.5
rpoC 763651 c.282C>T synonymous_variant 0.5
rpoC 763660 c.291T>G synonymous_variant 0.46
rpoC 763666 c.297G>A synonymous_variant 0.46
rpoC 763675 c.306C>G synonymous_variant 0.43
rpoC 763696 c.327T>C synonymous_variant 0.33
rpoC 763699 c.330G>T synonymous_variant 0.33
rpoC 763702 c.333C>G synonymous_variant 0.41
rpoC 763708 c.339G>C synonymous_variant 0.41
rpoC 763709 c.340C>T synonymous_variant 0.41
rpoC 763714 c.345G>C synonymous_variant 0.41
rpoC 763717 c.348T>C synonymous_variant 0.41
rpoC 763741 c.372C>T synonymous_variant 0.36
rpoC 763747 c.378G>A synonymous_variant 0.31
rpoC 763765 c.396T>G synonymous_variant 0.27
rpoC 763774 c.405G>C synonymous_variant 0.29
rpoC 763781 p.Ser138Ala missense_variant 0.23
rpoC 763858 c.489A>G synonymous_variant 0.18
rpoC 763861 c.492C>T synonymous_variant 0.27
rpoC 763867 c.498C>T synonymous_variant 0.17
rpoC 763872 p.Gly168Ala missense_variant 0.17
rpoC 763876 p.Glu169Asp missense_variant 0.31
rpoC 763879 c.510A>G synonymous_variant 0.31
rpoC 763891 c.522G>C synonymous_variant 0.27
rpoC 763894 c.525A>G synonymous_variant 0.27
rpoC 763900 c.531G>C synonymous_variant 0.27
rpoC 763903 c.534G>A synonymous_variant 0.29
rpoC 763925 p.Ala186Arg missense_variant 0.31
rpoC 763930 p.Glu187Asp missense_variant 0.31
rpoC 763933 c.564C>T synonymous_variant 0.36
rpoC 763940 p.Ala191Ser missense_variant 0.31
rpoC 763945 c.576T>C synonymous_variant 0.31
rpoC 763947 p.Ala193Val missense_variant 0.31
rpoC 763951 c.582G>C synonymous_variant 0.31
rpoC 763960 c.591T>G synonymous_variant 0.33
rpoC 763991 p.Ile208Leu missense_variant 0.33
rpoC 764002 c.633C>T synonymous_variant 0.25
rpoC 764020 p.Asp217Glu missense_variant 0.25
rpoC 764023 c.654G>T synonymous_variant 0.25
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.25
rpoC 764029 p.Glu220Asp missense_variant 0.27
rpoC 764032 p.Asp221Glu missense_variant 0.3
rpoC 764040 p.Ser224Thr missense_variant 0.3
rpoC 764044 c.675T>C synonymous_variant 0.27
rpoC 764059 c.690G>T synonymous_variant 0.36
rpoC 764071 c.702G>C synonymous_variant 0.33
rpoC 764077 c.708C>G synonymous_variant 0.33
rpoC 764083 c.714A>G synonymous_variant 0.25
rpoC 764084 p.Asn239Val missense_variant 0.25
rpoC 764098 c.729A>G synonymous_variant 0.29
rpoC 764102 p.Val245Ile missense_variant 0.29
rpoC 764227 c.858G>C synonymous_variant 0.15
rpoC 764239 c.870T>G synonymous_variant 0.18
rpoC 764242 c.873C>T synonymous_variant 0.18
rpoC 764245 c.876C>G synonymous_variant 0.15
rpoC 764248 c.879C>G synonymous_variant 0.17
rpoC 764263 c.894G>C synonymous_variant 0.18
rpoC 764266 c.897T>C synonymous_variant 0.18
rpoC 764320 c.951C>G synonymous_variant 0.44
rpoC 764341 c.972G>T synonymous_variant 0.44
rpoC 764359 c.990C>G synonymous_variant 0.5
rpoC 764365 c.996C>T synonymous_variant 0.44
rpoC 764371 c.1002G>C synonymous_variant 0.4
rpoC 764377 c.1008C>G synonymous_variant 0.4
rpoC 764380 c.1011G>C synonymous_variant 0.4
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.4
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.43
rpoC 764428 c.1059G>C synonymous_variant 0.39
rpoC 764431 c.1062G>C synonymous_variant 0.41
rpoC 764434 c.1065A>G synonymous_variant 0.41
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.41
rpoC 764458 c.1089G>C synonymous_variant 0.41
rpoC 764461 c.1092A>G synonymous_variant 0.43
rpoC 764497 c.1128A>G synonymous_variant 0.43
rpoC 764500 c.1131C>G synonymous_variant 0.5
rpoC 764521 c.1152T>C synonymous_variant 0.44
rpoC 764527 c.1158C>T synonymous_variant 0.41
rpoC 764530 c.1161C>T synonymous_variant 0.41
rpoC 764533 c.1164C>A synonymous_variant 0.41
rpoC 764536 c.1167G>T synonymous_variant 0.41
rpoC 764539 c.1170C>G synonymous_variant 0.47
rpoC 764566 c.1197C>G synonymous_variant 0.62
rpoC 764575 c.1206T>G synonymous_variant 0.66
rpoC 764611 c.1242G>T synonymous_variant 0.64
rpoC 764632 c.1263T>C synonymous_variant 0.54
rpoC 764650 c.1281G>T synonymous_variant 0.59
rpoC 764716 c.1347G>C synonymous_variant 0.74
rpoC 764746 c.1377G>T synonymous_variant 0.71
rpoC 764758 c.1389C>G synonymous_variant 0.68
rpoC 764764 c.1395T>C synonymous_variant 0.64
rpoC 764800 c.1431G>A synonymous_variant 0.6
rpoC 764803 c.1434C>T synonymous_variant 0.6
rpoC 764809 c.1440C>T synonymous_variant 0.6
rpoC 764815 c.1446A>G synonymous_variant 0.57
rpoC 764827 c.1458G>C synonymous_variant 0.48
rpoC 764858 c.1489T>C synonymous_variant 0.35
rpoC 764869 c.1500C>T synonymous_variant 0.34
rpoC 764878 c.1509C>G synonymous_variant 0.38
rpoC 764887 c.1518G>C synonymous_variant 0.43
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 0.43
rpoC 764911 c.1542A>G synonymous_variant 0.37
rpoC 764912 p.Met515Gln missense_variant 0.37
rpoC 764920 c.1551G>C synonymous_variant 0.43
rpoC 764923 c.1554A>G synonymous_variant 0.45
rpoC 764935 c.1566T>C synonymous_variant 0.48
rpoC 764948 c.1579T>C synonymous_variant 0.4
rpoC 764962 c.1593G>C synonymous_variant 0.25
rpoC 764968 c.1599T>C synonymous_variant 0.27
rpoC 765004 c.1635G>T synonymous_variant 0.33
rpoC 765007 c.1638T>G synonymous_variant 0.33
rpoC 765008 c.1639T>C synonymous_variant 0.33
rpoC 765011 c.1642_1643delAGinsTC synonymous_variant 0.37
rpoC 765016 c.1647C>G synonymous_variant 0.37
rpoC 765019 c.1650A>G synonymous_variant 0.37
rpoC 765034 c.1665T>C synonymous_variant 0.41
rpoC 765040 c.1671T>C synonymous_variant 0.41
rpoC 765041 c.1672T>C synonymous_variant 0.41
rpoC 765047 c.1678T>C synonymous_variant 0.41
rpoC 765052 c.1683C>G synonymous_variant 0.39
rpoC 765055 c.1686C>G synonymous_variant 0.39
rpoC 765070 c.1701G>T synonymous_variant 0.24
rpoC 765073 c.1704G>C synonymous_variant 0.2
rpoC 765076 c.1707A>G synonymous_variant 0.2
rpoC 765079 c.1710T>G synonymous_variant 0.2
rpoC 765082 c.1713G>C synonymous_variant 0.19
rpoC 765085 c.1716T>C synonymous_variant 0.19
rpoC 765089 c.1720T>C synonymous_variant 0.19
rpoC 765103 c.1734G>T synonymous_variant 0.23
rpoC 765121 c.1752G>A synonymous_variant 0.3
rpoC 765425 p.Lys686Ala missense_variant 0.22
rpoC 765434 p.His689Phe missense_variant 0.2
rpoC 765444 p.Val692Ala missense_variant 0.23
rpoC 765454 c.2085C>G synonymous_variant 0.33
rpoC 765466 c.2097C>T synonymous_variant 0.33
rpoC 765469 c.2100G>C synonymous_variant 0.33
rpoC 765493 c.2124G>C synonymous_variant 0.27
rpoC 765499 c.2130C>G synonymous_variant 0.21
rpoC 765505 c.2136C>G synonymous_variant 0.2
rpoC 765508 c.2139C>G synonymous_variant 0.2
rpoC 765580 c.2211G>C synonymous_variant 0.17
rpoC 765583 c.2214G>T synonymous_variant 0.17
rpoC 765676 p.Glu769Asp missense_variant 0.25
rpoC 765754 p.Asp795Glu missense_variant 0.2
rpoC 765772 c.2403C>G synonymous_variant 0.36
rpoC 765778 c.2409C>G synonymous_variant 0.36
rpoC 765779 p.Asp804Lys missense_variant 0.36
rpoC 765793 c.2424C>G synonymous_variant 0.42
rpoC 765800 p.Phe811Leu missense_variant 0.47
rpoC 765811 c.2442T>C synonymous_variant 0.47
rpoC 765814 c.2445A>C synonymous_variant 0.47
rpoC 765820 c.2451G>C synonymous_variant 0.44
rpoC 765823 c.2454C>G synonymous_variant 0.41
rpoC 765826 c.2457T>C synonymous_variant 0.39
rpoC 765835 c.2466C>T synonymous_variant 0.41
rpoC 765861 p.Phe831Tyr missense_variant 0.45
rpoC 765875 p.Val836Ile missense_variant 0.44
rpoC 765886 c.2517C>G synonymous_variant 0.36
rpoC 765892 c.2523T>C synonymous_variant 0.36
rpoC 765934 c.2565C>T synonymous_variant 0.3
rpoC 765937 c.2568T>C synonymous_variant 0.3
rpoC 765940 c.2571A>T synonymous_variant 0.3
rpoC 765946 c.2577C>T synonymous_variant 0.24
rpoC 765947 c.2578T>C synonymous_variant 0.25
rpoC 765952 c.2583G>C synonymous_variant 0.29
rpoC 765962 c.2593T>C synonymous_variant 0.27
rpoC 765967 c.2598C>T synonymous_variant 0.27
rpoC 765979 c.2610C>G synonymous_variant 0.32
rpoC 765982 c.2613C>T synonymous_variant 0.32
rpoC 765994 c.2625A>T synonymous_variant 0.3
rpoC 766012 c.2643C>G synonymous_variant 0.19
rpoC 766021 c.2652G>C synonymous_variant 0.19
rpoC 766030 c.2661C>T synonymous_variant 0.25
rpoC 766034 p.His889Thr missense_variant 0.18
rpoC 766645 p.Glu1092Asp missense_variant 0.88
rpoC 766693 c.3324C>T synonymous_variant 0.25
rpoC 766702 c.3333G>C synonymous_variant 0.25
rpoC 766711 c.3342C>T synonymous_variant 0.4
rpoC 766712 p.Ser1115Ala missense_variant 0.4
rpoC 766726 c.3357T>C synonymous_variant 0.5
rpoC 766738 c.3369G>T synonymous_variant 0.5
rpoC 766741 c.3372G>C synonymous_variant 0.5
rpoC 766753 c.3384C>T synonymous_variant 0.5
rpoC 766765 c.3396A>C synonymous_variant 0.53
rpoC 766771 c.3402G>T synonymous_variant 0.56
rpoC 766774 c.3405T>C synonymous_variant 0.56
rpoC 766777 c.3408C>G synonymous_variant 0.56
rpoC 766795 c.3426C>T synonymous_variant 0.63
rpoC 766798 c.3429C>G synonymous_variant 0.57
rpoC 766804 c.3435A>G synonymous_variant 0.55
rpoC 766837 c.3468G>C synonymous_variant 0.4
rpoC 766843 c.3474T>G synonymous_variant 0.33
rpoC 766846 c.3477C>G synonymous_variant 0.32
rpoC 766996 c.3627C>T synonymous_variant 0.17
rpoC 767008 c.3639G>A synonymous_variant 0.25
rpoC 767020 c.3651C>G synonymous_variant 0.23
rpoC 767023 c.3654C>T synonymous_variant 0.23
rpoC 767098 c.3729T>C synonymous_variant 0.19
rpoC 767104 c.3735C>G synonymous_variant 0.23
rpoC 767106 p.Asn1246Met missense_variant 0.23
rpoC 767152 c.3783T>C synonymous_variant 0.33
rpoC 767197 c.3828G>A synonymous_variant 0.23
rpoC 767221 c.3852C>G synonymous_variant 0.35
rpoC 767230 c.3861G>C synonymous_variant 0.4
rpoC 767233 c.3864T>C synonymous_variant 0.4
rpoC 767263 c.3894T>C synonymous_variant 0.4
rpoC 767264 p.Ala1299Gln missense_variant 0.4
rpoC 767267 p.Ala1300Ser missense_variant 0.4
rpoC 767281 c.3912C>G synonymous_variant 0.35
rpoC 767284 c.3915C>G synonymous_variant 0.32
rpoC 767296 c.3927C>T synonymous_variant 0.33
rpoC 767302 c.3933C>A synonymous_variant 0.33
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775787 c.2694C>T synonymous_variant 0.18
mmpL5 775793 c.2688C>G synonymous_variant 0.18
mmpL5 775796 p.Phe895Met missense_variant 0.18
mmpL5 775814 c.2667C>G synonymous_variant 0.58
mmpL5 775817 c.2664T>C synonymous_variant 0.52
mmpL5 775826 c.2655G>T synonymous_variant 0.63
mmpL5 775829 c.2652C>G synonymous_variant 0.59
mmpL5 775835 c.2646C>T synonymous_variant 0.23
mmpL5 775841 c.2640G>C synonymous_variant 0.52
mmpL5 775847 c.2634G>C synonymous_variant 0.62
mmpL5 775851 p.Ser877Thr missense_variant 0.36
mmpL5 775856 c.2625T>C synonymous_variant 0.73
mmpL5 775862 c.2619G>C synonymous_variant 0.73
mmpL5 775865 c.2616T>C synonymous_variant 0.76
mmpL5 775883 p.Ile866Leu missense_variant 0.68
mmpL5 775895 c.2586C>A synonymous_variant 0.68
mmpL5 775901 c.2580G>A synonymous_variant 0.66
mmpL5 775907 c.2572_2574delCTCinsTTG synonymous_variant 0.68
mmpL5 775910 c.2571G>A synonymous_variant 0.54
mmpL5 775913 c.2568C>G synonymous_variant 0.67
mmpL5 775916 c.2565T>C synonymous_variant 0.67
mmpL5 775946 c.2535C>G synonymous_variant 0.39
mmpL5 775951 c.2530C>T synonymous_variant 0.57
mmpL5 775955 p.Ile842Val missense_variant 0.31
mmpL5 775961 c.2520C>G synonymous_variant 0.69
mmpL5 775972 p.Ala837Pro missense_variant 0.19
mmpL5 775973 c.2506_2508delTTGinsCTA synonymous_variant 0.19
mmpL5 775981 p.Leu834Met missense_variant 0.59
mmpL5 775996 p.Ile829Val missense_variant 0.31
mmpL5 776002 c.2479C>T synonymous_variant 0.3
mmpL5 776039 c.2442C>G synonymous_variant 0.18
mmpL5 776048 c.2433G>A synonymous_variant 0.19
mmpL5 776075 c.2406C>G synonymous_variant 0.3
mmpL5 776078 c.2403C>G synonymous_variant 0.27
mmpL5 776081 c.2400G>C synonymous_variant 0.25
mmpL5 776087 c.2394C>G synonymous_variant 0.25
mmpL5 776090 c.2391C>T synonymous_variant 0.25
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776114 p.Ile789Leu missense_variant 0.18
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpL5 776608 p.Gln625* stop_gained 0.14
mmpL5 777501 p.Thr327Ile missense_variant 0.18
mmpL5 777503 c.978C>T synonymous_variant 0.18
mmpL5 777506 c.975C>T synonymous_variant 0.18
mmpL5 777512 c.969T>C synonymous_variant 0.18
mmpL5 777524 p.Gly319Ser missense_variant 0.17
mmpL5 777527 c.954G>A synonymous_variant 0.18
mmpL5 777557 c.924T>C synonymous_variant 0.17
mmpL5 777560 c.921C>G synonymous_variant 0.18
mmpL5 777569 p.Gly304His missense_variant 0.18
mmpL5 777590 c.891G>C synonymous_variant 0.22
mmpL5 777593 c.888G>A synonymous_variant 0.2
mmpL5 777608 c.869_872delGGCT frameshift_variant 0.18
mmpL5 777614 c.867C>T synonymous_variant 0.17
mmpL5 777617 c.864A>G synonymous_variant 0.15
mmpL5 777631 p.Arg284Ser missense_variant 0.15
mmpL5 777661 p.Ala274Ser missense_variant 0.19
mmpL5 777662 c.819C>A synonymous_variant 0.19
mmpL5 777665 c.816G>C synonymous_variant 0.19
mmpS5 778588 p.Gln106His missense_variant 0.29
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781559 c.-1G>C upstream_gene_variant 0.2
rpsL 781572 p.Gln5Asn missense_variant 0.17
rpsL 781595 c.36T>C synonymous_variant 0.22
rpsL 781598 c.39G>C synonymous_variant 0.22
rpsL 781605 p.Ile16Val missense_variant 0.22
rpsL 781608 p.Ser17Ala missense_variant 0.24
rpsL 781628 c.69T>C synonymous_variant 0.29
rpsL 781631 c.72G>C synonymous_variant 0.29
rpsL 781649 c.90T>C synonymous_variant 0.29
rpsL 781652 c.93T>C synonymous_variant 0.33
rpsL 781655 c.96T>C synonymous_variant 0.33
rpsL 781658 c.99A>G synonymous_variant 0.35
rpsL 781664 c.105C>T synonymous_variant 0.37
rpsL 781682 c.123T>C synonymous_variant 0.5
rpsL 781715 c.156T>C synonymous_variant 0.48
rpsL 781718 c.159C>T synonymous_variant 0.5
rpsL 781728 c.169T>C synonymous_variant 0.5
rpsL 781732 c.174_177delGAGT frameshift_variant 0.4
rpsL 781751 c.192G>C synonymous_variant 0.4
rpsL 781754 c.195G>C synonymous_variant 0.38
rpsL 781760 c.201T>C synonymous_variant 0.42
rpsL 781763 c.204C>G synonymous_variant 0.43
rpsL 781769 c.210G>A synonymous_variant 0.54
rpsL 781814 c.255C>T synonymous_variant 0.67
rpsL 781817 c.258G>T synonymous_variant 0.68
rpsL 781829 c.270G>T synonymous_variant 0.65
rpsL 781832 c.273T>C synonymous_variant 0.67
rpsL 781859 c.300T>C synonymous_variant 0.77
rpsL 781868 c.309T>C synonymous_variant 0.71
rpsL 781871 c.312G>C synonymous_variant 0.69
rpsL 781892 c.333A>G synonymous_variant 0.72
rpsL 781916 c.357T>G synonymous_variant 0.7
rpsL 781929 p.Gly124Ser missense_variant 0.69
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 0.69
rplC 800612 c.-197A>G upstream_gene_variant 0.29
rplC 800618 c.-191T>C upstream_gene_variant 0.33
rplC 800633 c.-176T>C upstream_gene_variant 0.4
rplC 800645 c.-164C>G upstream_gene_variant 0.5
rplC 800648 c.-161A>C upstream_gene_variant 0.61
rplC 800651 c.-158G>C upstream_gene_variant 0.58
rplC 800678 c.-131C>T upstream_gene_variant 0.47
rplC 800684 c.-125G>A upstream_gene_variant 0.47
rplC 800690 c.-119C>G upstream_gene_variant 0.47
rplC 800693 c.-116A>C upstream_gene_variant 0.5
rplC 800702 c.-107G>C upstream_gene_variant 0.5
rplC 800703 c.-106_-104delTTGinsCTT upstream_gene_variant 0.5
rplC 800715 c.-94A>C upstream_gene_variant 0.59
rplC 800720 c.-89T>C upstream_gene_variant 0.53
rplC 800744 c.-65G>C upstream_gene_variant 0.47
rplC 800745 c.-64_-62delCTCinsTTG upstream_gene_variant 0.45
rplC 800759 c.-50C>T upstream_gene_variant 0.41
rplC 800762 c.-47T>G upstream_gene_variant 0.41
rplC 800771 c.-38C>T upstream_gene_variant 0.37
rplC 800901 c.96delG frameshift_variant 0.2
fbiC 1303464 c.534A>C synonymous_variant 0.21
fbiC 1303470 c.540T>G synonymous_variant 0.21
fbiC 1303476 c.546G>C synonymous_variant 0.2
fbiC 1303480 p.Gln184Glu missense_variant 0.2
fbiC 1303492 c.562T>C synonymous_variant 0.23
fbiC 1303497 c.567G>C synonymous_variant 0.24
fbiC 1303503 c.573G>C synonymous_variant 0.27
fbiC 1303509 c.579G>C synonymous_variant 0.3
fbiC 1303515 c.585G>C synonymous_variant 0.35
fbiC 1303525 p.Ser199Thr missense_variant 0.36
fbiC 1303531 p.Met201Leu missense_variant 0.43
fbiC 1303536 c.606G>A synonymous_variant 0.45
fbiC 1303542 c.612C>G synonymous_variant 0.45
fbiC 1303548 c.618G>C synonymous_variant 0.5
fbiC 1303551 c.621G>T synonymous_variant 0.5
fbiC 1303560 c.630G>C synonymous_variant 0.53
fbiC 1303584 c.654C>A synonymous_variant 0.56
fbiC 1303602 c.672A>G synonymous_variant 0.53
fbiC 1303611 c.681G>C synonymous_variant 0.5
fbiC 1303614 c.684C>G synonymous_variant 0.5
fbiC 1303632 c.702T>G synonymous_variant 0.33
fbiC 1304508 p.Glu526Asp missense_variant 0.29
fbiC 1304526 c.1596T>C synonymous_variant 0.31
fbiC 1304529 c.1599T>C synonymous_variant 0.31
fbiC 1304533 c.1603T>C synonymous_variant 0.29
fbiC 1304544 c.1614T>C synonymous_variant 0.29
fbiC 1304546 p.Val539Ala missense_variant 0.29
fbiC 1304556 p.Asp542Glu missense_variant 0.29
fbiC 1304559 p.Glu543Asp missense_variant 0.29
fbiC 1304562 c.1632G>C synonymous_variant 0.29
fbiC 1304567 p.Phe546Tyr missense_variant 0.29
fbiC 1304580 c.1650T>C synonymous_variant 0.29
fbiC 1304583 c.1653C>T synonymous_variant 0.29
fbiC 1304607 c.1677C>T synonymous_variant 0.3
fbiC 1304628 c.1698G>A synonymous_variant 0.27
fbiC 1304634 c.1704C>T synonymous_variant 0.29
fbiC 1304640 c.1710A>C synonymous_variant 0.3
fbiC 1304658 c.1728C>G synonymous_variant 0.29
fbiC 1304660 p.Tyr577Phe missense_variant 0.25
fbiC 1304664 c.1734G>C synonymous_variant 0.25
fbiC 1304670 c.1740G>C synonymous_variant 0.24
fbiC 1304671 p.Val581Thr missense_variant 0.24
fbiC 1304675 p.Gly582Glu missense_variant 0.28
fbiC 1304688 p.Asp586Glu missense_variant 0.44
fbiC 1304694 c.1764A>C synonymous_variant 0.44
fbiC 1304698 p.Glu590Gln missense_variant 0.44
fbiC 1304706 c.1776C>T synonymous_variant 0.44
fbiC 1304711 p.Ala594Val missense_variant 0.47
fbiC 1304715 c.1785G>C synonymous_variant 0.53
fbiC 1304724 c.1794A>G synonymous_variant 0.43
fbiC 1304727 c.1797A>C synonymous_variant 0.45
fbiC 1304742 c.1812T>G synonymous_variant 0.43
fbiC 1304769 c.1839C>T synonymous_variant 0.36
fbiC 1304778 c.1848T>C synonymous_variant 0.3
fbiC 1304784 c.1854T>G synonymous_variant 0.25
fbiC 1304787 c.1857T>C synonymous_variant 0.26
fbiC 1304790 c.1860C>G synonymous_variant 0.22
fbiC 1304793 c.1863C>G synonymous_variant 0.22
fbiC 1304799 c.1869G>C synonymous_variant 0.25
fbiC 1304811 c.1881C>G synonymous_variant 0.29
fbiC 1304829 c.1899T>C synonymous_variant 0.3
fbiC 1304845 p.Ala639Ser missense_variant 0.27
fbiC 1304860 p.Lys644Gln missense_variant 0.17
fbiC 1304956 p.Val676Ile missense_variant 0.2
Rv1258c 1406158 p.Ile395Phe missense_variant 0.22
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
embR 1417024 p.Asn108Lys missense_variant 0.33
atpE 1460921 c.-124C>A upstream_gene_variant 0.22
atpE 1461132 p.Val30Ile missense_variant 0.5
atpE 1461137 c.93C>G synonymous_variant 0.45
atpE 1461149 c.105T>G synonymous_variant 0.45
atpE 1461158 c.114T>C synonymous_variant 0.45
atpE 1461159 p.Val39Ile missense_variant 0.45
atpE 1461170 c.126A>G synonymous_variant 0.54
atpE 1461179 c.135G>C synonymous_variant 0.5
atpE 1461182 c.138A>G synonymous_variant 0.5
atpE 1461185 c.141G>C synonymous_variant 0.5
atpE 1461197 c.153A>C synonymous_variant 0.44
atpE 1461219 c.175T>C synonymous_variant 0.44
atpE 1461224 c.180T>G synonymous_variant 0.47
atpE 1461230 c.186G>C synonymous_variant 0.4
atpE 1461233 c.189A>G synonymous_variant 0.33
atpE 1461254 c.210T>C synonymous_variant 0.33
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.4
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.4
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.38
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.38
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.39
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.23
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.25
rrs 1472027 n.184_188delCGGGA non_coding_transcript_exon_variant 0.25
rrs 1472036 n.192_193delAT non_coding_transcript_exon_variant 0.25
rrs 1472040 n.195T>C non_coding_transcript_exon_variant 0.25
rrs 1472042 n.197_198insCCTGGTG non_coding_transcript_exon_variant 0.23
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.31
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.29
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.43
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.56
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.56
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.58
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.18
rrs 1472270 n.425T>G non_coding_transcript_exon_variant 0.17
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.18
rrs 1472289 n.444T>C non_coding_transcript_exon_variant 0.18
rrs 1472290 n.445C>A non_coding_transcript_exon_variant 0.18
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 0.22
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.25
rrs 1472324 n.479G>T non_coding_transcript_exon_variant 0.25
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.36
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.36
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.38
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.47
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.44
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.47
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.27
rrs 1472705 n.860G>T non_coding_transcript_exon_variant 0.22
rrs 1472755 n.910G>A non_coding_transcript_exon_variant 0.5
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.5
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.38
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.38
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.38
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.38
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.38
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.42
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.53
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.53
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.65
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.65
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.67
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.78
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.79
rrl 1473391 n.-267C>A upstream_gene_variant 0.17
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.4
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.33
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 0.33
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.33
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.43
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.5
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.4
rrl 1473887 n.230T>A non_coding_transcript_exon_variant 0.4
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 0.4
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.4
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.4
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.5
rrl 1473922 n.265A>G non_coding_transcript_exon_variant 0.4
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.33
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.29
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.5
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.5
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.5
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.55
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.56
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.56
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.56
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.67
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.42
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.33
rrl 1474672 n.1015C>T non_coding_transcript_exon_variant 0.2
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.2
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.2
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.4
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.36
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.44
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.39
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.37
rrl 1475108 n.1451C>G non_coding_transcript_exon_variant 0.5
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 0.2
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 0.2
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.2
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.33
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.33
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.33
rrl 1475380 n.1723C>G non_coding_transcript_exon_variant 0.4
rrl 1475381 n.1724G>C non_coding_transcript_exon_variant 0.4
rrl 1475382 n.1725A>C non_coding_transcript_exon_variant 0.4
rrl 1475387 n.1730C>T non_coding_transcript_exon_variant 0.4
rrl 1475395 n.1738T>G non_coding_transcript_exon_variant 0.4
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 0.4
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 0.4
rrl 1475403 n.1746T>A non_coding_transcript_exon_variant 0.4
rrl 1475404 n.1747A>T non_coding_transcript_exon_variant 0.4
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.5
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.5
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.64
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.56
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.71
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.5
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.33
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.33
rrl 1475647 n.1990G>C non_coding_transcript_exon_variant 0.4
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.29
rrl 1475760 n.2103C>T non_coding_transcript_exon_variant 0.73
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.73
rrl 1475919 n.2262C>A non_coding_transcript_exon_variant 0.22
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.73
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.73
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.82
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.5
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.5
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.5
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.5
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.5
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.5
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.5
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.5
rrl 1476056 n.2399G>A non_coding_transcript_exon_variant 0.5
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.4
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.4
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.67
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.67
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.67
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.67
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.75
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.8
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.86
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.86
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.8
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.86
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.85
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.71
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.71
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.47
rrl 1476583 n.2926G>C non_coding_transcript_exon_variant 0.82
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.83
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.69
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.6
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.59
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.56
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.47
rrl 1476692 n.3035T>A non_coding_transcript_exon_variant 0.47
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.47
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.4
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.25
rrl 1476758 n.3101G>T non_coding_transcript_exon_variant 0.22
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.2
rrl 1476771 n.3114G>A non_coding_transcript_exon_variant 0.2
rrl 1476793 n.3136A>C splice_region_variant&non_coding_transcript_exon_variant 0.22
inhA 1673784 c.-418G>T upstream_gene_variant 0.19
inhA 1673796 c.-406G>C upstream_gene_variant 0.21
inhA 1673799 c.-403T>C upstream_gene_variant 0.21
inhA 1673802 c.-400A>G upstream_gene_variant 0.23
inhA 1673808 c.-394A>C upstream_gene_variant 0.23
inhA 1673814 c.-388C>G upstream_gene_variant 0.25
fabG1 1673829 p.Asn130Lys missense_variant 0.33
fabG1 1673830 p.Lys131Arg missense_variant 0.33
inhA 1673838 c.-364T>C upstream_gene_variant 0.33
inhA 1673841 c.-361A>G upstream_gene_variant 0.33
fabG1 1673844 p.Met135Ile missense_variant 0.33
inhA 1673847 c.-355A>C upstream_gene_variant 0.3
inhA 1673853 c.-349A>C upstream_gene_variant 0.3
inhA 1673856 c.-346T>C upstream_gene_variant 0.3
inhA 1673865 c.-337C>G upstream_gene_variant 0.25
inhA 1673868 c.-334C>T upstream_gene_variant 0.25
fabG1 1673870 p.Ser144Met missense_variant 0.25
inhA 1673877 c.-325C>T upstream_gene_variant 0.21
inhA 1673901 c.-301A>G upstream_gene_variant 0.24
fabG1 1673905 p.Ser156Ala missense_variant 0.22
inhA 1674403 p.Glu68* stop_gained 0.4
inhA 1674462 c.261G>A synonymous_variant 0.25
inhA 1674471 c.270G>C synonymous_variant 0.2
inhA 1674474 c.273G>C synonymous_variant 0.2
inhA 1674480 c.279T>C synonymous_variant 0.18
inhA 1674483 c.282G>C synonymous_variant 0.2
inhA 1674486 c.285T>C synonymous_variant 0.2
inhA 1674489 c.288G>T synonymous_variant 0.2
inhA 1674507 c.306G>A synonymous_variant 0.17
inhA 1674542 p.Ala114Glu missense_variant 0.15
inhA 1674879 c.678T>G synonymous_variant 0.25
inhA 1674883 p.Ile228Val missense_variant 0.25
inhA 1674904 p.Ala235Pro missense_variant 0.22
inhA 1674909 c.708G>C synonymous_variant 0.22
inhA 1674930 c.729C>T synonymous_variant 0.17
rpsA 1833619 c.78A>C synonymous_variant 0.3
rpsA 1833625 c.84A>G synonymous_variant 0.29
rpsA 1833628 c.87G>C synonymous_variant 0.29
rpsA 1833664 c.123C>G synonymous_variant 0.29
rpsA 1833676 c.135A>G synonymous_variant 0.23
rpsA 1833679 c.138G>C synonymous_variant 0.23
rpsA 1833682 c.141C>T synonymous_variant 0.23
rpsA 1833685 c.144G>C synonymous_variant 0.2
rpsA 1833694 c.153G>T synonymous_variant 0.23
rpsA 1833697 c.156C>G synonymous_variant 0.21
rpsA 1833703 c.162C>T synonymous_variant 0.21
rpsA 1833709 c.168C>T synonymous_variant 0.2
rpsA 1833727 c.186G>C synonymous_variant 0.19
rpsA 1833734 p.Ala65Ser missense_variant 0.19
rpsA 1833739 c.198C>T synonymous_variant 0.2
rpsA 1833745 c.204G>C synonymous_variant 0.24
rpsA 1833760 c.219C>T synonymous_variant 0.21
rpsA 1833772 c.231C>T synonymous_variant 0.22
rpsA 1833787 c.246C>G synonymous_variant 0.28
rpsA 1833790 c.249T>C synonymous_variant 0.27
rpsA 1833793 c.252C>T synonymous_variant 0.28
rpsA 1833802 c.261A>G synonymous_variant 0.27
rpsA 1833805 c.264C>T synonymous_variant 0.26
rpsA 1833808 c.267G>C synonymous_variant 0.26
rpsA 1833811 c.270G>T synonymous_variant 0.35
rpsA 1833829 c.288A>G synonymous_variant 0.38
rpsA 1833832 c.291G>A synonymous_variant 0.39
rpsA 1833835 c.294C>T synonymous_variant 0.43
rpsA 1833838 c.297G>C synonymous_variant 0.37
rpsA 1833841 c.300C>G synonymous_variant 0.37
rpsA 1833847 c.306C>G synonymous_variant 0.38
rpsA 1833856 c.315A>G synonymous_variant 0.39
rpsA 1833862 c.321G>T synonymous_variant 0.47
rpsA 1833874 c.333T>G synonymous_variant 0.5
rpsA 1833894 p.Ala118Glu missense_variant 0.47
rpsA 1833928 c.387G>C synonymous_variant 0.42
rpsA 1833949 c.408T>C synonymous_variant 0.41
rpsA 1833970 c.429G>T synonymous_variant 0.48
rpsA 1833976 c.435C>T synonymous_variant 0.48
rpsA 1833979 c.438T>C synonymous_variant 0.43
rpsA 1833991 c.450C>A synonymous_variant 0.42
rpsA 1834000 c.459G>C synonymous_variant 0.4
rpsA 1834015 c.474G>C synonymous_variant 0.38
rpsA 1834021 c.480C>T synonymous_variant 0.38
rpsA 1834030 c.489C>G synonymous_variant 0.34
rpsA 1834069 c.528G>C synonymous_variant 0.34
rpsA 1834096 c.555G>C synonymous_variant 0.35
rpsA 1834099 c.558C>G synonymous_variant 0.34
rpsA 1834102 c.561T>C synonymous_variant 0.34
rpsA 1834108 c.567C>G synonymous_variant 0.33
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834213 c.672G>C synonymous_variant 0.2
rpsA 1834231 c.690T>C synonymous_variant 0.23
rpsA 1834234 c.693G>C synonymous_variant 0.21
rpsA 1834240 c.699T>C synonymous_variant 0.23
rpsA 1834249 c.708T>C synonymous_variant 0.23
rpsA 1834252 c.711C>T synonymous_variant 0.25
rpsA 1834261 c.720A>G synonymous_variant 0.32
rpsA 1834264 c.723G>C synonymous_variant 0.32
rpsA 1834279 c.738C>T synonymous_variant 0.3
rpsA 1834294 c.753G>C synonymous_variant 0.36
rpsA 1834298 p.Gln253Thr missense_variant 0.36
rpsA 1834303 c.762T>C synonymous_variant 0.38
rpsA 1834306 c.765T>C synonymous_variant 0.38
rpsA 1834348 c.807T>C synonymous_variant 0.62
rpsA 1834361 c.820T>C synonymous_variant 0.65
rpsA 1834366 c.825A>G synonymous_variant 0.65
rpsA 1834387 c.846C>T synonymous_variant 0.62
rpsA 1834396 c.855G>C synonymous_variant 0.62
rpsA 1834411 c.870T>C synonymous_variant 0.71
rpsA 1834417 c.876G>C synonymous_variant 0.71
rpsA 1834423 c.882G>C synonymous_variant 0.79
rpsA 1834451 c.910T>C synonymous_variant 0.59
rpsA 1834456 c.915T>G synonymous_variant 0.61
rpsA 1834468 c.927A>G synonymous_variant 0.65
rpsA 1834483 c.942G>A synonymous_variant 0.67
rpsA 1834489 c.948T>C synonymous_variant 0.6
rpsA 1834498 c.957C>T synonymous_variant 0.63
rpsA 1834513 c.972C>G synonymous_variant 0.59
rpsA 1834520 p.Ala327Ser missense_variant 0.56
rpsA 1834528 c.987T>C synonymous_variant 0.5
rpsA 1834540 c.999G>C synonymous_variant 0.5
rpsA 1834543 c.1002C>G synonymous_variant 0.5
rpsA 1834546 c.1005T>C synonymous_variant 0.5
rpsA 1834554 c.1014_1015delTG frameshift_variant 0.47
rpsA 1834558 c.1017_1018insAG frameshift_variant 0.5
rpsA 1834606 c.1065C>T synonymous_variant 0.62
rpsA 1834609 c.1068T>C synonymous_variant 0.62
rpsA 1834619 c.1078T>C synonymous_variant 0.62
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.62
rpsA 1834633 c.1092A>G synonymous_variant 0.73
rpsA 1834639 c.1098T>C synonymous_variant 0.73
rpsA 1834666 c.1125G>C synonymous_variant 0.76
rpsA 1834667 p.Ala376Ser missense_variant 0.76
rpsA 1834690 c.1149T>C synonymous_variant 0.94
rpsA 1834700 p.Gln387Ala missense_variant 1.0
rpsA 1834705 c.1164C>G synonymous_variant 1.0
rpsA 1834720 c.1179C>G synonymous_variant 0.88
rpsA 1834732 c.1191T>C synonymous_variant 0.81
rpsA 1834738 p.Glu399Asp missense_variant 0.74
rpsA 1834747 c.1206A>G synonymous_variant 0.74
rpsA 1834753 c.1212T>C synonymous_variant 0.65
rpsA 1834759 c.1218A>C synonymous_variant 0.61
rpsA 1834765 p.Glu408Asp missense_variant 0.57
rpsA 1834775 p.Ala412Thr missense_variant 0.52
rpsA 1834786 c.1245A>G synonymous_variant 0.52
rpsA 1834789 c.1248T>C synonymous_variant 0.52
rpsA 1834810 c.1269C>T synonymous_variant 0.43
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2102081 p.Gly321Val missense_variant 0.2
ndh 2102836 c.207T>G synonymous_variant 0.2
ndh 2102845 c.198A>C synonymous_variant 0.18
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155659 c.453C>G synonymous_variant 0.25
katG 2155677 c.435C>G synonymous_variant 0.46
katG 2155689 c.421_423delTTGinsCTC synonymous_variant 0.43
katG 2155695 c.417C>G synonymous_variant 0.46
katG 2155716 c.396T>G synonymous_variant 0.36
katG 2155722 c.390G>C synonymous_variant 0.36
katG 2155728 c.384G>C synonymous_variant 0.36
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2167958 c.2655G>A synonymous_variant 0.14
PPE35 2168075 c.2538G>T synonymous_variant 0.22
PPE35 2168116 p.Gly833Cys missense_variant 0.4
PPE35 2168909 c.1704C>A synonymous_variant 0.17
PPE35 2169377 p.Phe412Leu missense_variant 0.17
Rv1979c 2221854 c.1311C>T synonymous_variant 0.2
Rv1979c 2222869 p.Ala99Asp missense_variant 0.4
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289743 c.-502A>G upstream_gene_variant 0.29
kasA 2517941 c.-174C>G upstream_gene_variant 0.65
kasA 2517953 c.-162C>T upstream_gene_variant 0.58
kasA 2517959 c.-156C>T upstream_gene_variant 0.57
kasA 2517962 c.-153C>G upstream_gene_variant 0.57
kasA 2517968 c.-147T>C upstream_gene_variant 0.52
kasA 2517974 c.-141T>C upstream_gene_variant 0.5
kasA 2517989 c.-126T>C upstream_gene_variant 0.47
kasA 2517993 c.-122G>T upstream_gene_variant 0.47
kasA 2518013 c.-102G>A upstream_gene_variant 0.24
kasA 2518574 p.Ile154Val missense_variant 0.17
kasA 2518582 c.468G>T synonymous_variant 0.18
kasA 2518583 p.Gln157Glu missense_variant 0.17
kasA 2518606 c.492G>C synonymous_variant 0.18
kasA 2518609 p.Met165Ile missense_variant 0.2
kasA 2518618 c.504G>C synonymous_variant 0.2
kasA 2518624 c.510C>A synonymous_variant 0.2
kasA 2518636 c.522C>T synonymous_variant 0.18
kasA 2518642 c.528A>G synonymous_variant 0.18
kasA 2518645 c.531G>C synonymous_variant 0.18
kasA 2518657 c.543G>A synonymous_variant 0.18
kasA 2519009 p.Gly299Trp missense_variant 0.5
kasA 2519128 c.1014G>A synonymous_variant 0.29
kasA 2519131 c.1017G>C synonymous_variant 0.44
kasA 2519137 c.1023T>G synonymous_variant 0.67
kasA 2519158 c.1044C>T synonymous_variant 0.6
kasA 2519161 c.1047G>C synonymous_variant 0.5
kasA 2519167 c.1053T>C synonymous_variant 0.4
kasA 2519170 c.1056G>C synonymous_variant 0.4
kasA 2519180 p.Val356Ile missense_variant 0.44
kasA 2519185 c.1071C>G synonymous_variant 0.5
kasA 2519188 c.1074G>C synonymous_variant 0.5
kasA 2519195 p.Thr361Ala missense_variant 0.5
kasA 2519203 c.1089C>T synonymous_variant 0.5
kasA 2519209 c.1095C>T synonymous_variant 0.57
kasA 2519227 c.1113G>C synonymous_variant 0.4
ahpC 2726338 p.Val49Gly missense_variant 0.5
pepQ 2859723 c.696T>C synonymous_variant 0.2
pepQ 2859732 c.687C>T synonymous_variant 0.3
pepQ 2859747 c.672C>G synonymous_variant 0.38
pepQ 2859756 c.663C>T synonymous_variant 0.5
pepQ 2859778 p.Val214Asp missense_variant 0.62
pepQ 2859780 p.Gln213Ala missense_variant 0.62
pepQ 2859789 c.630G>C synonymous_variant 0.71
pepQ 2859798 c.621G>C synonymous_variant 0.56
pepQ 2859807 c.612C>T synonymous_variant 0.45
pepQ 2859816 c.603G>C synonymous_variant 0.3
pepQ 2859822 c.597T>C synonymous_variant 0.3
pepQ 2859825 c.594C>G synonymous_variant 0.3
pepQ 2859828 c.591G>C synonymous_variant 0.3
pepQ 2859834 c.585T>C synonymous_variant 0.3
pepQ 2859843 c.576G>C synonymous_variant 0.3
pepQ 2859852 c.567A>C synonymous_variant 0.18
pepQ 2859859 p.Ala187Gly missense_variant 0.17
pepQ 2859864 c.555T>C synonymous_variant 0.15
pepQ 2860187 p.Ala78Ser missense_variant 0.25
Rv2752c 3065223 c.969T>C synonymous_variant 0.15
Rv2752c 3065429 c.763T>C synonymous_variant 0.2
Rv2752c 3065430 c.762A>T synonymous_variant 0.2
Rv2752c 3065439 c.753C>G synonymous_variant 0.2
Rv2752c 3065457 c.735A>C synonymous_variant 0.18
Rv2752c 3065481 c.711T>C synonymous_variant 0.2
Rv2752c 3065487 c.705T>G synonymous_variant 0.22
Rv2752c 3065490 c.702A>C synonymous_variant 0.22
Rv2752c 3065556 c.636G>T synonymous_variant 0.29
Rv2752c 3066069 p.Leu41Phe missense_variant 0.25
thyA 3073860 c.612C>G synonymous_variant 0.43
thyA 3073863 c.609T>C synonymous_variant 0.43
thyA 3073888 p.Ser195Gln missense_variant 0.62
thyA 3073892 c.580T>C synonymous_variant 0.62
thyA 3073902 c.570C>T synonymous_variant 0.62
thyA 3073905 c.567C>G synonymous_variant 0.62
thyA 3073920 c.552C>G synonymous_variant 0.61
thyA 3073925 c.547T>C synonymous_variant 0.59
thyA 3073953 c.519T>C synonymous_variant 0.47
thyA 3073956 c.516G>C synonymous_variant 0.43
thyA 3073962 c.510G>C synonymous_variant 0.43
thyA 3073968 c.504C>G synonymous_variant 0.38
thyA 3073977 c.495A>G synonymous_variant 0.38
thyA 3073983 c.489C>G synonymous_variant 0.38
thyA 3073989 c.483T>C synonymous_variant 0.27
thyA 3073993 c.478_479delAGinsTC synonymous_variant 0.2
thyA 3073999 p.Arg158Thr missense_variant 0.2
thyA 3074004 c.468T>C synonymous_variant 0.2
thyA 3074013 c.459C>T synonymous_variant 0.25
thyA 3074028 c.444G>C synonymous_variant 0.18
thyA 3074031 c.441T>C synonymous_variant 0.2
thyA 3074045 c.427C>T synonymous_variant 0.18
thyA 3074053 p.Arg140Gln missense_variant 0.18
thyA 3074056 p.Glu139Pro missense_variant 0.18
thyA 3074079 c.393G>C synonymous_variant 0.22
thyA 3074097 c.375C>G synonymous_variant 0.22
thyA 3074100 c.372T>C synonymous_variant 0.22
thyA 3074106 c.366T>C synonymous_variant 0.2
thyA 3074118 c.354G>A synonymous_variant 0.18
thyA 3074127 c.345G>C synonymous_variant 0.18
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087683 c.864C>T synonymous_variant 0.27
ald 3087686 c.867C>G synonymous_variant 0.31
ald 3087698 c.879G>C synonymous_variant 0.31
ald 3087699 p.Leu294Val missense_variant 0.31
ald 3087704 c.885T>C synonymous_variant 0.35
ald 3087716 c.897G>C synonymous_variant 0.4
ald 3087727 p.Ala303Gly missense_variant 0.38
ald 3087729 p.Ser304Ala missense_variant 0.38
ald 3087738 p.Lys307Arg missense_variant 0.38
ald 3087743 c.924G>A synonymous_variant 0.38
ald 3087752 c.933C>T synonymous_variant 0.38
ald 3087776 c.957G>C synonymous_variant 0.27
fbiD 3339216 p.Gln33His missense_variant 0.18
Rv3083 3449676 c.1173C>A synonymous_variant 0.18
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474150 c.144G>T synonymous_variant 0.13
fprA 3474585 p.Glu193Asp missense_variant 0.15
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
fbiB 3641690 c.156G>T synonymous_variant 0.17
fbiB 3642047 c.513G>C synonymous_variant 0.25
alr 3841098 p.Pro108Leu missense_variant 0.2
rpoA 3877548 c.960C>T synonymous_variant 0.17
rpoA 3877554 c.954G>C synonymous_variant 0.17
rpoA 3877567 p.Ser314Thr missense_variant 0.18
rpoA 3877569 p.Pro313Ala missense_variant 0.19
rpoA 3877587 c.921A>G synonymous_variant 0.4
rpoA 3877590 c.918G>C synonymous_variant 0.4
rpoA 3877593 c.915C>T synonymous_variant 0.47
rpoA 3877602 c.906C>T synonymous_variant 0.63
rpoA 3877617 c.891G>C synonymous_variant 0.67
rpoA 3877647 c.861C>T synonymous_variant 0.64
rpoA 3877656 c.852T>C synonymous_variant 0.64
rpoA 3877662 c.846C>T synonymous_variant 0.61
rpoA 3877668 c.840A>G synonymous_variant 0.59
rpoA 3877679 p.Ala277Ser missense_variant 0.57
rpoA 3877686 c.822A>G synonymous_variant 0.59
rpoA 3877692 c.816G>C synonymous_variant 0.59
rpoA 3877704 c.804G>C synonymous_variant 0.61
rpoA 3877728 c.780C>G synonymous_variant 0.73
rpoA 3877731 c.777G>C synonymous_variant 0.73
rpoA 3877743 c.765T>C synonymous_variant 0.69
rpoA 3877746 c.762G>C synonymous_variant 0.68
rpoA 3877764 c.744C>G synonymous_variant 0.62
rpoA 3877776 c.732T>C synonymous_variant 0.68
rpoA 3877782 c.726T>C synonymous_variant 0.68
rpoA 3877818 c.690A>G synonymous_variant 0.72
rpoA 3877848 c.660C>T synonymous_variant 0.65
rpoA 3877854 c.652_654delTTGinsCTC synonymous_variant 0.68
rpoA 3877857 c.651G>A synonymous_variant 0.68
rpoA 3877866 c.642G>C synonymous_variant 0.68
rpoA 3877875 c.633T>C synonymous_variant 0.64
rpoA 3877878 c.630G>T synonymous_variant 0.64
rpoA 3877893 c.615C>T synonymous_variant 0.64
rpoA 3877900 p.Ser203Thr missense_variant 0.67
rpoA 3877905 c.603A>G synonymous_variant 0.67
rpoA 3877908 c.600T>C synonymous_variant 0.7
rpoA 3877920 c.588G>C synonymous_variant 0.67
rpoA 3877923 c.585C>T synonymous_variant 0.67
rpoA 3877926 c.582G>C synonymous_variant 0.7
rpoA 3877962 c.546G>C synonymous_variant 0.53
rpoA 3877971 p.Asp179Glu missense_variant 0.58
rpoA 3877989 c.519A>G synonymous_variant 0.44
rpoA 3877998 c.510G>C synonymous_variant 0.38
rpoA 3878001 c.507A>G synonymous_variant 0.33
rpoA 3878019 c.489A>G synonymous_variant 0.3
rpoA 3878022 c.486T>C synonymous_variant 0.3
rpoA 3878025 c.483C>T synonymous_variant 0.26
rpoA 3878028 c.480G>C synonymous_variant 0.24
rpoA 3878031 c.477T>C synonymous_variant 0.22
rpoA 3878034 c.474A>G synonymous_variant 0.22
rpoA 3878043 c.465G>C synonymous_variant 0.2
rpoA 3878046 c.462T>C synonymous_variant 0.2
rpoA 3878050 p.Arg153Lys missense_variant 0.2
rpoA 3878055 c.453A>G synonymous_variant 0.2
rpoA 3878061 c.447G>C synonymous_variant 0.2
rpoA 3878064 c.444G>C synonymous_variant 0.2
rpoA 3878067 c.441C>G synonymous_variant 0.19
rpoA 3878094 c.414C>G synonymous_variant 0.28
rpoA 3878103 c.405A>G synonymous_variant 0.27
rpoA 3878106 c.402G>C synonymous_variant 0.29
rpoA 3878118 c.390T>C synonymous_variant 0.19
rpoA 3878127 p.Thr127Ala missense_variant 0.2
rpoA 3878130 c.378C>G synonymous_variant 0.21
rpoA 3878141 p.Met123Leu missense_variant 0.2
rpoA 3878142 p.Gly122Asp missense_variant 0.2
rpoA 3878145 p.Pro121Ala missense_variant 0.2
rpoA 3878157 c.351C>G synonymous_variant 0.24
rpoA 3878160 c.348C>G synonymous_variant 0.24
rpoA 3878163 c.345C>T synonymous_variant 0.25
rpoA 3878184 c.324C>T synonymous_variant 0.31
rpoA 3878193 c.315T>C synonymous_variant 0.29
rpoA 3878197 p.Glu104Ala missense_variant 0.2
rpoA 3878205 c.303T>C synonymous_variant 0.33
rpoA 3878217 c.291A>G synonymous_variant 0.38
rpoA 3878244 c.264G>A synonymous_variant 0.35
rpoA 3878256 c.252G>C synonymous_variant 0.35
rpoA 3878262 p.Ser82Gly missense_variant 0.33
rpoA 3878271 c.237T>C synonymous_variant 0.25
rpoA 3878283 p.Glu75Asp missense_variant 0.2
rpoA 3878292 c.216T>C synonymous_variant 0.2
rpoA 3878298 c.210A>G synonymous_variant 0.2
rpoA 3878301 c.207C>G synonymous_variant 0.2
rpoA 3878304 c.204G>T synonymous_variant 0.21
rpoA 3878310 c.198G>C synonymous_variant 0.22
rpoA 3878313 c.195G>C synonymous_variant 0.21
clpC1 4038569 c.2136C>T synonymous_variant 0.29
clpC1 4038575 c.2130C>G synonymous_variant 0.33
clpC1 4038596 c.2109A>G synonymous_variant 0.33
clpC1 4038620 p.Gln695Leu missense_variant 0.27
clpC1 4038623 c.2082A>G synonymous_variant 0.2
clpC1 4038640 p.Asp689Asn missense_variant 0.25
clpC1 4038647 c.2058T>C synonymous_variant 0.21
clpC1 4038650 c.2055C>T synonymous_variant 0.21
clpC1 4038653 c.2052C>T synonymous_variant 0.21
clpC1 4038658 p.Lys683Gln missense_variant 0.2
clpC1 4038661 p.Ser682Thr missense_variant 0.2
clpC1 4038662 c.2043T>C synonymous_variant 0.2
clpC1 4038668 c.2037G>C synonymous_variant 0.22
clpC1 4038671 c.2034T>G synonymous_variant 0.22
clpC1 4038679 p.Pro676Ala missense_variant 0.25
clpC1 4038683 c.2022T>C synonymous_variant 0.25
clpC1 4038693 c.2011_2012delTCinsAG synonymous_variant 0.24
clpC1 4038701 c.2004G>C synonymous_variant 0.25
clpC1 4038704 c.2001T>C synonymous_variant 0.23
clpC1 4038713 c.1992T>C synonymous_variant 0.26
clpC1 4038740 c.1965G>C synonymous_variant 0.41
clpC1 4038746 c.1959C>T synonymous_variant 0.41
clpC1 4038749 c.1956C>T synonymous_variant 0.48
clpC1 4038767 c.1938G>C synonymous_variant 0.55
clpC1 4038770 c.1935C>T synonymous_variant 0.5
clpC1 4038773 c.1932T>C synonymous_variant 0.5
clpC1 4038779 c.1926C>G synonymous_variant 0.5
clpC1 4038782 c.1923G>C synonymous_variant 0.5
clpC1 4038790 c.1915C>T synonymous_variant 0.57
clpC1 4038795 p.Ser637Thr missense_variant 0.57
clpC1 4038812 c.1893T>C synonymous_variant 0.57
clpC1 4038815 c.1890G>C synonymous_variant 0.56
clpC1 4038836 c.1869G>C synonymous_variant 0.61
clpC1 4038842 c.1863G>C synonymous_variant 0.62
clpC1 4038845 c.1860G>C synonymous_variant 0.58
clpC1 4038860 c.1845G>C synonymous_variant 0.62
clpC1 4038878 c.1827A>G synonymous_variant 0.56
clpC1 4038890 c.1815G>A synonymous_variant 0.5
clpC1 4038905 c.1800A>T synonymous_variant 0.33
clpC1 4038908 c.1797C>G synonymous_variant 0.29
clpC1 4038911 c.1794G>T synonymous_variant 0.33
clpC1 4038914 c.1791G>C synonymous_variant 0.31
clpC1 4038917 c.1788C>T synonymous_variant 0.31
clpC1 4038923 c.1782A>C synonymous_variant 0.33
clpC1 4038941 c.1764G>C synonymous_variant 0.35
clpC1 4038953 c.1752A>G synonymous_variant 0.39
clpC1 4038956 c.1749T>C synonymous_variant 0.39
clpC1 4038965 c.1740T>C synonymous_variant 0.36
clpC1 4038971 c.1734T>C synonymous_variant 0.28
clpC1 4038974 c.1731T>C synonymous_variant 0.28
clpC1 4038977 c.1728G>C synonymous_variant 0.28
clpC1 4038983 c.1722C>T synonymous_variant 0.29
clpC1 4038989 c.1716T>C synonymous_variant 0.29
clpC1 4038997 c.1708T>C synonymous_variant 0.29
clpC1 4039022 c.1683A>G synonymous_variant 0.25
clpC1 4039034 c.1671C>G synonymous_variant 0.45
clpC1 4039037 c.1668T>C synonymous_variant 0.47
clpC1 4039064 c.1641C>T synonymous_variant 0.51
clpC1 4039067 c.1638G>C synonymous_variant 0.51
clpC1 4039079 c.1626C>G synonymous_variant 0.55
clpC1 4039085 c.1620A>G synonymous_variant 0.55
clpC1 4039091 c.1614G>C synonymous_variant 0.57
clpC1 4039097 c.1608G>C synonymous_variant 0.54
clpC1 4039119 c.1585_1586delTCinsAG synonymous_variant 0.55
clpC1 4039121 c.1584T>C synonymous_variant 0.53
clpC1 4039124 c.1581C>G synonymous_variant 0.53
clpC1 4039142 c.1563A>G synonymous_variant 0.53
clpC1 4039145 c.1560G>C synonymous_variant 0.53
clpC1 4039154 c.1551G>C synonymous_variant 0.54
clpC1 4039169 p.Glu512Asp missense_variant 0.43
clpC1 4039178 c.1527G>C synonymous_variant 0.34
clpC1 4039183 c.1522T>C synonymous_variant 0.32
clpC1 4039187 c.1518G>T synonymous_variant 0.32
clpC1 4039190 c.1515C>G synonymous_variant 0.28
clpC1 4039208 c.1497C>G synonymous_variant 0.29
clpC1 4039238 c.1467C>T synonymous_variant 0.28
clpC1 4039241 c.1464G>C synonymous_variant 0.28
clpC1 4039262 c.1443C>T synonymous_variant 0.26
clpC1 4039274 c.1431G>C synonymous_variant 0.27
clpC1 4039277 c.1428C>T synonymous_variant 0.27
clpC1 4039280 c.1425G>C synonymous_variant 0.27
clpC1 4039286 c.1419T>C synonymous_variant 0.24
clpC1 4039292 c.1413C>T synonymous_variant 0.19
clpC1 4039298 c.1407T>C synonymous_variant 0.19
clpC1 4039304 c.1401G>A synonymous_variant 0.2
clpC1 4039310 c.1395A>G synonymous_variant 0.27
clpC1 4039313 c.1392C>T synonymous_variant 0.27
clpC1 4039319 c.1386T>C synonymous_variant 0.34
clpC1 4039328 c.1377A>G synonymous_variant 0.37
clpC1 4039334 c.1371G>C synonymous_variant 0.42
clpC1 4039337 c.1368A>C synonymous_variant 0.4
clpC1 4039347 p.Arg453Lys missense_variant 0.39
clpC1 4039359 p.Ser449Asn missense_variant 0.41
clpC1 4039382 c.1323C>G synonymous_variant 0.48
clpC1 4039391 c.1314T>G synonymous_variant 0.48
clpC1 4039394 c.1311G>C synonymous_variant 0.48
clpC1 4039409 c.1296T>C synonymous_variant 0.52
clpC1 4039412 c.1293T>G synonymous_variant 0.52
clpC1 4039415 p.Glu430Asp missense_variant 0.52
clpC1 4039430 c.1275T>C synonymous_variant 0.54
clpC1 4039442 c.1263A>G synonymous_variant 0.54
clpC1 4039448 c.1257A>G synonymous_variant 0.56
clpC1 4039463 c.1242C>G synonymous_variant 0.5
clpC1 4039466 c.1239T>C synonymous_variant 0.52
clpC1 4039469 c.1236T>C synonymous_variant 0.5
clpC1 4039472 c.1233G>C synonymous_variant 0.48
clpC1 4039481 c.1224T>C synonymous_variant 0.48
clpC1 4039484 c.1221T>G synonymous_variant 0.46
clpC1 4039487 c.1218G>C synonymous_variant 0.46
clpC1 4039526 c.1179G>C synonymous_variant 0.37
clpC1 4039553 c.1152C>G synonymous_variant 0.34
clpC1 4039556 c.1149G>C synonymous_variant 0.36
clpC1 4039559 c.1146C>G synonymous_variant 0.36
clpC1 4039570 p.Met379Leu missense_variant 0.33
clpC1 4039574 p.Ala377Gly missense_variant 0.31
clpC1 4039577 c.1128T>C synonymous_variant 0.33
clpC1 4039586 c.1119G>C synonymous_variant 0.37
clpC1 4039589 c.1116G>C synonymous_variant 0.37
clpC1 4039592 c.1113G>C synonymous_variant 0.36
clpC1 4039598 c.1107C>T synonymous_variant 0.34
clpC1 4039610 c.1095G>C synonymous_variant 0.28
clpC1 4039616 c.1089G>C synonymous_variant 0.36
clpC1 4039622 c.1083C>T synonymous_variant 0.38
clpC1 4039649 c.1056G>C synonymous_variant 0.38
clpC1 4039652 c.1053G>C synonymous_variant 0.39
clpC1 4039655 c.1050G>C synonymous_variant 0.42
clpC1 4039664 c.1041G>C synonymous_variant 0.36
clpC1 4039673 c.1032G>C synonymous_variant 0.48
clpC1 4039691 c.1014G>C synonymous_variant 0.26
clpC1 4039717 p.Lys330Gln missense_variant 0.2
clpC1 4039721 c.984C>T synonymous_variant 0.26
clpC1 4039724 c.981A>G synonymous_variant 0.43
clpC1 4039733 c.972G>C synonymous_variant 0.35
clpC1 4039736 c.969C>G synonymous_variant 0.35
clpC1 4039739 c.966C>G synonymous_variant 0.27
clpC1 4039742 c.963C>T synonymous_variant 0.46
clpC1 4039748 c.957G>C synonymous_variant 0.5
clpC1 4039751 c.954A>G synonymous_variant 0.5
clpC1 4039757 c.948A>G synonymous_variant 0.43
clpC1 4039766 c.939T>C synonymous_variant 0.43
clpC1 4039769 c.936C>G synonymous_variant 0.43
clpC1 4039778 c.927A>G synonymous_variant 0.36
clpC1 4039787 c.916_918delTCGinsAGC synonymous_variant 0.36
clpC1 4039796 c.909C>T synonymous_variant 0.43
clpC1 4039817 c.888A>T synonymous_variant 0.47
clpC1 4039820 c.885T>G synonymous_variant 0.47
clpC1 4039823 c.882T>G synonymous_variant 0.47
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.41
clpC1 4039832 c.873C>G synonymous_variant 0.41
clpC1 4039850 c.855T>C synonymous_variant 0.5
clpC1 4039865 c.840T>C synonymous_variant 0.58
clpC1 4039898 c.807C>G synonymous_variant 0.57
clpC1 4039904 c.801A>G synonymous_variant 0.55
clpC1 4039916 c.789T>C synonymous_variant 0.5
clpC1 4039919 c.786C>T synonymous_variant 0.48
clpC1 4039931 c.774T>C synonymous_variant 0.57
clpC1 4039934 c.771G>C synonymous_variant 0.57
clpC1 4039937 c.768G>C synonymous_variant 0.57
clpC1 4039946 c.759A>C synonymous_variant 0.62
clpC1 4039949 c.756G>C synonymous_variant 0.57
clpC1 4039952 c.753T>C synonymous_variant 0.57
clpC1 4039955 c.750G>C synonymous_variant 0.57
clpC1 4039958 c.747G>C synonymous_variant 0.62
clpC1 4039979 c.726C>G synonymous_variant 0.64
clpC1 4039991 c.714G>T synonymous_variant 0.59
clpC1 4040015 c.690G>C synonymous_variant 0.48
clpC1 4040021 c.684A>C synonymous_variant 0.45
clpC1 4040024 c.681A>G synonymous_variant 0.43
clpC1 4040027 c.678C>G synonymous_variant 0.45
clpC1 4040033 c.672G>C synonymous_variant 0.44
clpC1 4040042 c.663C>T synonymous_variant 0.47
clpC1 4040057 c.648C>T synonymous_variant 0.47
clpC1 4040066 c.639G>C synonymous_variant 0.44
clpC1 4040087 c.618G>C synonymous_variant 0.29
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.29
clpC1 4040093 c.612C>G synonymous_variant 0.29
clpC1 4040135 c.570C>G synonymous_variant 0.31
clpC1 4040138 c.567G>C synonymous_variant 0.17
clpC1 4040144 c.561G>C synonymous_variant 0.2
clpC1 4040147 c.558A>G synonymous_variant 0.18
clpC1 4040153 c.552A>G synonymous_variant 0.2
clpC1 4040159 c.546G>C synonymous_variant 0.25
clpC1 4040165 c.540G>C synonymous_variant 0.25
clpC1 4040168 c.537G>C synonymous_variant 0.25
clpC1 4040171 c.534C>G synonymous_variant 0.25
clpC1 4040234 c.471C>A synonymous_variant 0.25
clpC1 4040243 c.462C>T synonymous_variant 0.33
clpC1 4040249 c.456A>G synonymous_variant 0.33
clpC1 4040255 c.450C>G synonymous_variant 0.33
clpC1 4040258 c.447G>A synonymous_variant 0.31
clpC1 4040267 c.438A>G synonymous_variant 0.36
clpC1 4040273 c.432T>C synonymous_variant 0.36
clpC1 4040284 c.421C>T synonymous_variant 0.43
clpC1 4040291 c.414G>C synonymous_variant 0.54
clpC1 4040312 c.393G>C synonymous_variant 0.5
clpC1 4040315 c.390G>A synonymous_variant 0.5
clpC1 4040321 c.384C>T synonymous_variant 0.5
clpC1 4040327 c.378G>A synonymous_variant 0.47
clpC1 4040330 c.375C>G synonymous_variant 0.44
clpC1 4040336 c.369G>C synonymous_variant 0.41
clpC1 4040354 c.351A>G synonymous_variant 0.44
clpC1 4040357 c.348T>C synonymous_variant 0.44
clpC1 4040363 c.342A>T synonymous_variant 0.45
clpC1 4040369 c.336C>G synonymous_variant 0.5
clpC1 4040372 c.333C>G synonymous_variant 0.5
clpC1 4040380 c.325T>C synonymous_variant 0.5
clpC1 4040381 c.324T>C synonymous_variant 0.48
clpC1 4040387 c.318A>G synonymous_variant 0.45
clpC1 4040393 c.312G>C synonymous_variant 0.52
clpC1 4040411 c.294T>C synonymous_variant 0.52
clpC1 4040420 c.285G>C synonymous_variant 0.48
clpC1 4040423 c.282A>G synonymous_variant 0.43
clpC1 4040431 c.274T>C synonymous_variant 0.38
clpC1 4040433 c.271_272delAGinsTC synonymous_variant 0.38
clpC1 4040435 c.270G>C synonymous_variant 0.38
clpC1 4040441 c.264C>T synonymous_variant 0.38
clpC1 4040444 c.261C>T synonymous_variant 0.35
clpC1 4040450 c.255A>G synonymous_variant 0.39
clpC1 4040459 c.246C>G synonymous_variant 0.39
clpC1 4040462 c.243C>G synonymous_variant 0.39
clpC1 4040465 c.240T>C synonymous_variant 0.39
clpC1 4040471 c.234T>C synonymous_variant 0.42
clpC1 4040477 c.228G>T synonymous_variant 0.44
clpC1 4040480 c.225T>G synonymous_variant 0.46
clpC1 4040513 c.192G>A synonymous_variant 0.57
clpC1 4040522 c.183T>C synonymous_variant 0.56
clpC1 4040531 c.174T>C synonymous_variant 0.52
clpC1 4040540 c.165G>C synonymous_variant 0.46
clpC1 4040543 c.162C>T synonymous_variant 0.4
clpC1 4040546 c.159G>C synonymous_variant 0.4
clpC1 4040551 c.154T>C synonymous_variant 0.4
clpC1 4040558 c.147G>C synonymous_variant 0.33
clpC1 4040561 c.144A>G synonymous_variant 0.32
clpC1 4040570 c.135C>G synonymous_variant 0.36
clpC1 4040573 c.132T>A synonymous_variant 0.36
clpC1 4040579 c.126A>G synonymous_variant 0.36
clpC1 4040582 c.123G>T synonymous_variant 0.35
clpC1 4040585 c.120A>G synonymous_variant 0.36
clpC1 4040588 c.117T>C synonymous_variant 0.38
clpC1 4040594 c.111G>C synonymous_variant 0.38
clpC1 4040600 c.103_105delTTAinsCTC synonymous_variant 0.4
clpC1 4040603 c.102T>G synonymous_variant 0.4
clpC1 4040606 c.99T>C synonymous_variant 0.42
clpC1 4040644 c.61A>C synonymous_variant 0.27
panD 4044150 c.132A>C synonymous_variant 0.38
panD 4044159 c.123C>T synonymous_variant 0.5
panD 4044165 c.117G>C synonymous_variant 0.53
panD 4044177 c.105C>G synonymous_variant 0.53
panD 4044180 c.102C>T synonymous_variant 0.53
panD 4044188 c.94T>C synonymous_variant 0.53
panD 4044192 c.90C>G synonymous_variant 0.53
panD 4044195 c.87T>C synonymous_variant 0.53
panD 4044210 c.72C>T synonymous_variant 0.53
panD 4044213 c.69C>G synonymous_variant 0.59
panD 4044231 p.Cys17Gln missense_variant 0.67
panD 4044252 c.30C>T synonymous_variant 0.67
panD 4044261 c.21G>A synonymous_variant 0.67
panD 4044287 c.-6A>G upstream_gene_variant 0.67
embC 4240726 c.864G>C synonymous_variant 0.31
embC 4240732 c.870C>T synonymous_variant 0.31
embC 4240736 p.Ser292Ala missense_variant 0.29
embC 4240768 c.906G>C synonymous_variant 0.35
embC 4240771 c.909G>C synonymous_variant 0.35
embC 4240780 c.918T>C synonymous_variant 0.3
embC 4240783 c.921G>C synonymous_variant 0.3
embC 4240786 c.924C>T synonymous_variant 0.28
embC 4240789 c.927T>C synonymous_variant 0.26
embC 4240819 c.957A>C synonymous_variant 0.27
embC 4240822 c.960C>G synonymous_variant 0.26
embC 4240831 c.969T>G synonymous_variant 0.29
embC 4240855 c.993G>C synonymous_variant 0.16
embC 4241072 p.Leu404Val missense_variant 0.27
embC 4241869 c.2007G>T synonymous_variant 0.18
embC 4241881 c.2019G>A synonymous_variant 0.18
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243435 p.Arg68His missense_variant 0.5
embA 4243460 c.228C>T synonymous_variant 1.0
embB 4247079 p.Phe189Tyr missense_variant 0.17
embB 4247437 c.924A>G synonymous_variant 0.17
embB 4247446 c.933C>T synonymous_variant 0.18
embB 4247451 p.Ala313Gly missense_variant 0.22
embB 4247462 p.Ser317Ala missense_variant 0.46
embB 4247470 c.957T>C synonymous_variant 0.46
embB 4247491 c.978G>C synonymous_variant 0.5
embB 4247497 c.984T>C synonymous_variant 0.5
embB 4247500 c.987C>G synonymous_variant 0.5
embB 4247512 c.999T>C synonymous_variant 0.4
embB 4247519 p.Leu336Val missense_variant 0.4
embB 4248818 p.Gly769Ser missense_variant 0.29
embB 4249127 p.His872Asn missense_variant 0.2
aftB 4267647 p.Asp397Gly missense_variant 1.0
aftB 4269516 c.-680G>A upstream_gene_variant 0.2
ethA 4326307 c.1167C>A synonymous_variant 0.2
ethA 4327208 p.Ala89Glu missense_variant 0.29
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0