Rv3596c - c.312G>C


Drug resistance types
64 Sensitive 45 RR-TB 114 HR-TB 125 MDR-TB 7 Pre-XDR-TB 2 XDR-TB 241 Other
lineage Counts
lineage Count
lineage4.9 159
M.canetti 66
La3;M.canetti 10
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 17
La3;lineage2 1
lineage4.8 6
M.canetti;lineage2.1;lineage6.3 2
lineage4.9;lineage9 3
lineage4.1.2.1 16
lineage2.1;lineage4.9;lineage6.3 11
lineage2.2.1 22
lineage2;lineage4 1
lineage4.3.4.1 2
lineage3;lineage4.9 1
lineage2.2.1.1 3
lineage1.1.1;lineage4 1
La1.2.BCG 2
lineage4.6.2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4 1
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
lineage4.9;lineage6.3 7
18
lineage4.6.3;lineage4.9 3
La1.7;lineage4.9;lineage6 1
La3;lineage4.9 11
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7;M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 2
lineage4.9;lineage7 4
La3;lineage2.1;lineage4.9 1
lineage6.3.1 1
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.9 25
La1.7.X-unk4;lineage4.9 1
lineage2.2.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage3 7
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.7;lineage4.9 9
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9 6
La2;M.canetti 1
lineage4.2.1 1
lineage2.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.2 1
lineage4.3.2.1 2
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4 5
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage1;lineage4.9 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage6.1.3 1
lineage4.3.3 4
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage3.1 1
lineage4.3.4.2.1 1
lineage5.1.4 1
M.canetti;lineage2.1;lineage3 1
lineage4.1.1.1 2
La1.6;lineage4 1
lineage3.1;lineage9 1
lineage2.2 4
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1.2 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage6.3 2
La1.7.1 2
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1 3
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1;lineage3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.1.3 2
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage5.2 2
lineage4.9.1 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.2;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
lineage4.4.1.1 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.8.1 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 2
La1;lineage2;lineage4.9 1
La1.2.BCG;La1.8.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.5 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1;lineage4.8 1
lineage4.1.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1;lineage4.9 2
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage1.2.1.2 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 598
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR24061598 Other M.canetti None
ERR266122 Other La3;M.canetti None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR5818676 Other M.canetti dj
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR3675247 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR266108 Other M.canetti None
ERR4769450 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR1043164 Other La3;M.canetti None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR6044890 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR22179528 Other M.canetti None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28170812 Other M.canetti None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR4796577 HR-TB None
ERR2514692 Other None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
ERR3597004 Sensitive M.canetti None
ERR6866807 RR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR266106 Other M.canetti None
ERR6358979 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR3597003 Other M.canetti None
ERR3797087 Sensitive lineage4.9 None
ERR1336821 Sensitive La3;M.canetti None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR20632814 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR6359070 Sensitive lineage4.9 None
SRR5818567 Other M.canetti dj
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR24061600 Other M.canetti None
ERR9787014 RR-TB lineage6.1.1 None
SRR10522763 Sensitive M.canetti None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR16058668 Other M.canetti None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR4798504 RR-TB lineage3 None
ERR552304 Other M.canetti None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR926165 Other lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR266110 Other M.canetti None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR266126 Other La2;M.canetti None
SRR1180226 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR552307 Other M.canetti None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR313113 Other M.canetti None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
SRR24061597 Sensitive M.canetti None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR24061599 Other M.canetti None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR10177258 Other M.canetti None
ERR126597 HR-TB lineage4.4.1.2 None
SRR6785267 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR551056 Other M.canetti None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6650709 Other M.canetti None
SRR6044819 Sensitive lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR13861332 Other lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1238558 Other lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196478 Other lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR1336826 Sensitive La3;M.canetti None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6046594 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR6044780 Sensitive lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
ERR9786604 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR212001 HR-TB None
SRR28351554 Other La1.6;lineage4 None
SRR28119777 Other lineage4.9 None
SRR6045795 Other lineage2.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769530 RR-TB lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR9786515 Other lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266109 Other M.canetti None
ERR266107 Other M.canetti None
ERR3597001 Other M.canetti None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
SRR15014682 MDR-TB lineage4.8 None
ERR3797083 RR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926156 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR1336824 Sensitive La3;M.canetti None
ERR926154 Sensitive lineage4.9 None
ERR551055 Other M.canetti None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR10177259 Other M.canetti None
SRR10522783 Sensitive M.canetti None
ERR4821046 Other M.canetti None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3597002 Other M.canetti None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR5818668 Other M.canetti dj
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR266120 Other M.canetti None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR5818614 Other M.canetti dj
ERR9125480 Other M.canetti None
ERR1336825 Sensitive La3;M.canetti None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR3799304 RR-TB lineage6.1.1 None
ERR266121 Other M.canetti None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR551057 Other M.canetti None
ERR926160 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR4816019 Other M.canetti None
SRR6044815 RR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR5818661 Other M.canetti dj
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1184329 Other lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR1043163 Other La3;M.canetti None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR7451301 Other M.canetti None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR10177260 Other M.canetti None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR266124 Other M.canetti None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR5818605 Other M.canetti None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183144 RR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR11662690 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR5341456 Other lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR10177261 Other M.canetti None
SRR18289195 Sensitive M.canetti None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
SRR18289196 Other M.canetti None
SRR12708416 Sensitive None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786076 Other lineage3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046878 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4815361 Other M.canetti None
ERR4820773 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3597005 Other M.canetti None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4819927 Other M.canetti None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5818652 Other M.canetti dj
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR313116 Other M.canetti None
SRR16156817 Other lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR313115 Other M.canetti None
SRR3675461 RR-TB lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3597006 Other La3;M.canetti None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR10177263 Other M.canetti None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR313117 Other M.canetti None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR551182 Sensitive M.canetti None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR10177262 Other M.canetti None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4817181 Other M.canetti None
ERR551180 Sensitive M.canetti None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR926159 Sensitive lineage4.9 None
ERR551181 Sensitive M.canetti None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR313114 Other M.canetti None
ERR176751 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283011 Other La3;lineage4.9 None
ERR3597007 Other M.canetti None
SRR13861305 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR552306 Other M.canetti;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1336822 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR1336820 Sensitive La3;M.canetti None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675387 Other lineage4.9 None
SRR5818685 Other M.canetti None
ERR6358951 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR7496472 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5818653 Other M.canetti dj
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR552305 Other M.canetti None
SRR6045371 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR5311077 Other La1.8.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
SRR16058674 Other M.canetti None
SRR12006550 Other lineage1.2.1.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9125475 Other M.canetti None
SRR13423544 Other lineage4.5 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR13861296 Sensitive lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3804155 Other lineage4.1.2.1 None