Run ID: ERR9786986
Sample name:
Date: 2024-10-03T20:23:23.520257
Number of reads: 895210
Percentage reads mapped: 77.16
Median coverage: 41.0
Strain: lineage4.1.2.1
Spoligotype:
Drug-resistance: HR-TB
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage4.1 | Euro-American | None | 0.94 |
lineage4.1.2 | Euro-American | None | 0.99 |
lineage4.1.2.1 | Euro-American (Haarlem) | RD182 | 0.98 |
lineage4 | Euro-American | None | 0.96 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | katG | p.Ser315Thr | Assoc w R | High-level resistance |
ethambutol | ||||
pyrazinamide | ||||
streptomycin | gid | c.102delG | Assoc w R | |
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | folC | p.Glu153Ala | Mutation from literature | |
delamanid | ||||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid | Assoc w R | High-level resistance |
folC | 2747141 | p.Glu153Ala | missense_variant | 0.98 | para-aminosalicylic_acid | Mutation from literature | |
gid | 4408100 | c.102delG | frameshift_variant | 1.0 | streptomycin | Assoc w R |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 633 | c.633T>G | synonymous_variant | 0.18 | isoniazid | |
dnaA | 636 | c.636C>G | synonymous_variant | 0.17 | isoniazid | |
dnaA | 645 | c.645A>C | synonymous_variant | 0.17 | isoniazid | Not assoc w R - Interim |
dnaA | 657 | c.657C>T | synonymous_variant | 0.18 | isoniazid | Not assoc w R - Interim |
dnaA | 660 | c.660G>C | synonymous_variant | 0.18 | isoniazid | Not assoc w R - Interim |
dnaA | 663 | c.663A>C | synonymous_variant | 0.19 | isoniazid | |
dnaA | 672 | c.672T>C | synonymous_variant | 0.18 | isoniazid | Not assoc w R - Interim |
dnaA | 675 | c.675C>G | synonymous_variant | 0.18 | isoniazid | Not assoc w R - Interim |
dnaA | 678 | c.678A>G | synonymous_variant | 0.18 | isoniazid | Not assoc w R - Interim |
dnaA | 681 | c.681G>A | synonymous_variant | 0.18 | isoniazid | |
dnaA | 682 | c.682T>C | synonymous_variant | 0.18 | isoniazid | |
dnaA | 693 | c.693A>G | synonymous_variant | 0.21 | isoniazid | Not assoc w R - Interim |
dnaA | 705 | c.705A>G | synonymous_variant | 0.21 | isoniazid | |
dnaA | 708 | c.708T>C | synonymous_variant | 0.19 | isoniazid | |
dnaA | 711 | c.711C>G | synonymous_variant | 0.2 | isoniazid | |
dnaA | 741 | c.741T>C | synonymous_variant | 0.24 | isoniazid | Not assoc w R - Interim |
dnaA | 750 | c.750C>A | synonymous_variant | 0.25 | isoniazid | |
dnaA | 756 | c.756T>C | synonymous_variant | 0.26 | isoniazid | |
dnaA | 771 | c.771A>G | synonymous_variant | 0.25 | isoniazid | |
dnaA | 777 | c.777A>G | synonymous_variant | 0.24 | isoniazid | |
dnaA | 795 | c.795A>C | synonymous_variant | 0.27 | isoniazid | Not assoc w R - Interim |
dnaA | 802 | c.802C>T | synonymous_variant | 0.26 | isoniazid | |
dnaA | 819 | c.819C>T | synonymous_variant | 0.27 | isoniazid | |
dnaA | 822 | c.822A>G | synonymous_variant | 0.27 | isoniazid | |
dnaA | 828 | c.828T>C | synonymous_variant | 0.27 | isoniazid | Not assoc w R - Interim |
dnaA | 831 | c.831A>G | synonymous_variant | 0.27 | isoniazid | |
dnaA | 837 | c.837A>G | synonymous_variant | 0.26 | isoniazid | |
dnaA | 840 | c.840G>A | synonymous_variant | 0.27 | isoniazid | |
dnaA | 849 | c.849A>G | synonymous_variant | 0.23 | isoniazid | |
dnaA | 864 | c.864C>T | synonymous_variant | 0.23 | isoniazid | |
dnaA | 877 | c.877T>C | synonymous_variant | 0.19 | isoniazid | |
dnaA | 897 | c.897A>G | synonymous_variant | 0.21 | isoniazid | |
dnaA | 927 | c.927G>A | synonymous_variant | 0.2 | isoniazid | |
dnaA | 945 | c.945G>A | synonymous_variant | 0.17 | isoniazid | |
dnaA | 955 | c.955A>C | synonymous_variant | 0.17 | isoniazid | |
gyrB | 6190 | c.951A>G | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6214 | c.975G>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6238 | c.999G>A | synonymous_variant | 0.19 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6250 | c.1011A>G | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6292 | c.1053G>T | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6299 | c.1060C>T | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6403 | c.-899T>C | upstream_gene_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 8382 | p.Leu361Met | missense_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8459 | c.1158G>A | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8510 | c.1209G>A | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8588 | c.1287G>A | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8591 | c.1290C>T | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8603 | c.1302A>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8619 | c.1318T>C | synonymous_variant | 0.2 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8633 | c.1332C>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8636 | c.1335A>C | synonymous_variant | 0.23 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8642 | c.1341A>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8645 | c.1344C>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8678 | c.1377G>A | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8693 | c.1392T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8696 | c.1395G>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8711 | c.1410A>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8714 | c.1413A>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8717 | c.1416C>G | synonymous_variant | 0.24 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8720 | c.1419G>A | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8729 | c.1428T>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8732 | c.1431G>C | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8747 | c.1446A>G | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8751 | p.Ala484Thr | missense_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8756 | c.1455A>G | synonymous_variant | 0.2 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 0.19 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8894 | c.1593C>G | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8900 | c.1599G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8939 | c.1638T>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8942 | c.1641G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8945 | c.1644G>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8946 | c.1645_1647delTTGinsCTC | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9029 | c.1728T>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9032 | c.1731T>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9038 | c.1737C>G | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9050 | p.Asp583Glu | missense_variant | 0.24 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9051 | c.1750T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9062 | c.1761C>G | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9066 | c.1765C>A | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9071 | c.1770G>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9074 | c.1773G>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9080 | c.1779G>T | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9083 | c.1782G>A | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9089 | c.1788G>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9095 | c.1794C>T | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9099 | c.1798_1800delTTAinsCTG | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9661 | p.Ala787Asp | missense_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9665 | c.2364A>G | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9674 | c.2373T>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
Rv0010c | 13462 | p.Asp33Tyr | missense_variant | 1.0 | isoniazid | Uncertain significance |
fgd1 | 491022 | c.240C>G | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491496 | c.714C>T | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491591 | p.Lys270Met | missense_variant | 0.93 | pretomanid | |
delamanid | Uncertain significance | |||||
clofazimine | Not assoc w R | |||||
mshA | 575649 | p.Val101Ala | missense_variant | 0.31 | isoniazid | |
ethionamide | ||||||
mshA | 575659 | c.312A>G | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
mshA | 575665 | c.318G>C | synonymous_variant | 0.39 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
mshA | 575679 | p.Asn111Ser | missense_variant | 0.61 | isoniazid | Not assoc w R |
ethionamide | Not assoc w R | |||||
mshA | 575695 | c.348C>G | synonymous_variant | 0.37 | isoniazid | Not assoc w R - Interim |
ethionamide | ||||||
mshA | 575704 | c.357T>C | synonymous_variant | 0.35 | isoniazid | |
ethionamide | ||||||
mshA | 575705 | c.358T>C | synonymous_variant | 0.35 | isoniazid | |
ethionamide | ||||||
mshA | 575713 | c.366G>A | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
mshA | 575728 | c.381C>T | synonymous_variant | 0.28 | isoniazid | |
ethionamide | ||||||
mshA | 575734 | c.387T>G | synonymous_variant | 0.25 | isoniazid | |
ethionamide | ||||||
mshA | 575737 | c.390T>C | synonymous_variant | 0.26 | isoniazid | |
ethionamide | ||||||
mshA | 575764 | c.417C>G | synonymous_variant | 0.27 | isoniazid | |
ethionamide | ||||||
mshA | 575771 | p.Val142Ser | missense_variant | 0.24 | isoniazid | |
ethionamide | ||||||
mshA | 575785 | c.438T>C | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 575786 | p.Tyr147His | missense_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 575864 | c.517T>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
mshA | 575878 | c.531A>G | synonymous_variant | 0.24 | isoniazid | |
ethionamide | ||||||
mshA | 575893 | c.546C>G | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 575896 | c.549G>C | synonymous_variant | 0.2 | isoniazid | |
ethionamide | ||||||
mshA | 575902 | c.555C>T | synonymous_variant | 0.2 | isoniazid | Not assoc w R - Interim |
ethionamide | ||||||
mshA | 575908 | c.561A>G | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
mshA | 575914 | c.567C>G | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
mshA | 575916 | p.Asp190Ala | missense_variant | 0.2 | isoniazid | |
ethionamide | ||||||
mshA | 575925 | p.Gly193Ala | missense_variant | 0.19 | isoniazid | |
ethionamide | ||||||
mshA | 575944 | c.597T>C | synonymous_variant | 0.23 | isoniazid | |
ethionamide | ||||||
mshA | 575953 | c.606G>C | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
mshA | 575959 | c.612G>A | synonymous_variant | 0.2 | isoniazid | |
ethionamide | ||||||
mshA | 575980 | c.633T>C | synonymous_variant | 0.18 | isoniazid | |
ethionamide | ||||||
mshA | 575984 | c.637T>C | synonymous_variant | 0.18 | isoniazid | |
ethionamide | ||||||
Rv0565c | 657144 | c.327T>C | synonymous_variant | 0.23 | ethionamide | |
Rv0565c | 657160 | p.Glu104Arg | missense_variant | 0.24 | ethionamide | |
Rv0565c | 657187 | p.His95Arg | missense_variant | 0.24 | ethionamide | |
Rv0565c | 657189 | c.282C>G | synonymous_variant | 0.24 | ethionamide | |
Rv0565c | 657193 | p.Met93Thr | missense_variant | 0.27 | ethionamide | |
Rv0565c | 657196 | p.Asp92Ala | missense_variant | 0.26 | ethionamide | |
Rv0565c | 657199 | p.Thr91Val | missense_variant | 0.27 | ethionamide | |
Rv0565c | 657201 | c.270C>G | synonymous_variant | 0.27 | ethionamide | |
Rv0565c | 657220 | p.Ala84Val | missense_variant | 0.28 | ethionamide | |
Rv0565c | 657233 | p.Ile80Val | missense_variant | 0.29 | ethionamide | |
Rv0565c | 657240 | p.Glu77Lys | missense_variant | 0.29 | ethionamide | |
Rv0565c | 657243 | c.228C>A | synonymous_variant | 0.31 | ethionamide | |
Rv0565c | 657259 | p.Tyr71Phe | missense_variant | 0.34 | ethionamide | |
Rv0565c | 657261 | c.210C>A | synonymous_variant | 0.33 | ethionamide | Not assoc w R - Interim |
Rv0565c | 657264 | c.207T>C | synonymous_variant | 0.32 | ethionamide | |
Rv0565c | 657267 | p.Ser68Pro | missense_variant | 0.35 | ethionamide | Uncertain significance |
Rv0565c | 657291 | c.180C>G | synonymous_variant | 0.42 | ethionamide | |
Rv0565c | 657294 | c.177C>T | synonymous_variant | 0.41 | ethionamide | |
Rv0565c | 657318 | c.153T>C | synonymous_variant | 0.28 | ethionamide | |
Rv0565c | 657324 | c.147C>G | synonymous_variant | 0.27 | ethionamide | |
hadA | 732370 | c.441C>T | synonymous_variant | 0.18 | isoniazid | |
hadA | 732373 | p.Glu148Asp | missense_variant | 0.2 | isoniazid | |
hadA | 732376 | c.447T>C | synonymous_variant | 0.2 | isoniazid | |
hadA | 732378 | c.450_452dupAGA | disruptive_inframe_insertion | 0.21 | isoniazid | |
hadA | 732391 | c.462T>C | synonymous_variant | 0.19 | isoniazid | |
hadA | 732396 | p.Gly156Ala | missense_variant | 0.19 | isoniazid | |
hadA | 732398 | p.Ala157Thr | missense_variant | 0.18 | isoniazid | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.2 | rifampicin | |
nusG | 734454 | c.201A>G | synonymous_variant | 0.2 | rifampicin | |
nusG | 734457 | c.204C>G | synonymous_variant | 0.21 | rifampicin | |
nusG | 734460 | c.207G>C | synonymous_variant | 0.21 | rifampicin | |
nusG | 734472 | c.219T>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
nusG | 734475 | c.222T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
nusG | 734490 | c.237C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R |
nusG | 734499 | c.246G>C | synonymous_variant | 0.19 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760115 | c.309C>T | synonymous_variant | 0.93 | rifampicin | Not assoc w R |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.17 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.3 | rifampicin | Uncertain significance |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243His | missense_variant | 0.31 | rifampicin | |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 760561 | c.757_758delCG | frameshift_variant | 0.28 | rifampicin | |
rpoB | 760567 | p.Ser254Trp | missense_variant | 0.28 | rifampicin | |
rpoB | 760568 | c.762_763insGC | frameshift_variant | 0.28 | rifampicin | |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.29 | rifampicin | |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760634 | c.828T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 760674 | c.868T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760679 | c.873A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 760748 | c.942C>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760751 | c.945G>C | synonymous_variant | 0.2 | rifampicin | |
rpoB | 760757 | c.951T>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760759 | p.Val318Ala | missense_variant | 0.19 | rifampicin | |
rpoB | 760769 | c.963C>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760781 | c.975G>C | synonymous_variant | 0.18 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.17 | rifampicin | |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761345 | c.1539G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761354 | c.1548C>T | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761362 | p.Ser519Thr | missense_variant | 0.23 | rifampicin | |
rpoB | 761373 | p.Val523His | missense_variant | 0.24 | rifampicin | |
rpoB | 761408 | c.1602G>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761414 | c.1608A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 761423 | c.1617T>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761435 | c.1629T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761439 | p.Asp545Ser | missense_variant | 0.23 | rifampicin | |
rpoB | 761444 | c.1638T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761447 | c.1641C>G | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761452 | p.Val549Glu | missense_variant | 0.23 | rifampicin | |
rpoB | 761457 | p.Pro551Ser | missense_variant | 0.23 | rifampicin | |
rpoB | 761477 | c.1671C>G | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761483 | c.1677G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.27 | rifampicin | |
rpoB | 761504 | c.1698C>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761531 | c.1725C>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 761564 | c.1758G>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761682 | c.1876C>T | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761690 | c.1884G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761705 | c.1899C>T | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761720 | c.1914C>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761772 | p.His656Ala | missense_variant | 0.21 | rifampicin | |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.23 | rifampicin | |
rpoB | 761791 | p.Arg662His | missense_variant | 0.21 | rifampicin | |
rpoB | 761815 | p.Ala670Asp | missense_variant | 0.17 | rifampicin | |
rpoB | 761819 | c.2013G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761834 | c.2028T>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.2 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761873 | c.2067A>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761891 | c.2085G>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761906 | c.2100C>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.18 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.31 | rifampicin | Uncertain significance |
rpoB | 762122 | c.2316C>T | synonymous_variant | 0.34 | rifampicin | |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.3 | rifampicin | |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.31 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762248 | c.2442G>C | synonymous_variant | 0.3 | rifampicin | |
rpoB | 762254 | c.2448T>G | synonymous_variant | 0.32 | rifampicin | |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.33 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.35 | rifampicin | |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.31 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.3 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.29 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 762389 | c.-981G>A | upstream_gene_variant | 0.24 | rifampicin | |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.19 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.21 | rifampicin | |
rpoB | 762416 | c.2610A>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.23 | rifampicin | |
rpoC | 762446 | c.-924C>G | upstream_gene_variant | 0.23 | rifampicin | |
rpoB | 762929 | c.3123G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 762962 | c.3156C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 762995 | c.3189G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 763028 | c.3222T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763076 | c.-294C>G | upstream_gene_variant | 0.35 | rifampicin | |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 763127 | c.3321G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 763142 | c.-228C>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoC | 763187 | c.-183C>G | upstream_gene_variant | 0.26 | rifampicin | |
rpoC | 763202 | c.-168A>C | upstream_gene_variant | 0.19 | rifampicin | |
rpoB | 763238 | c.3432T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 763253 | c.-117G>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.32 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.31 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 763729 | c.360G>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.32 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763765 | c.396T>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763768 | c.399C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 763780 | c.411C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 0.38 | rifampicin | |
rpoC | 763801 | c.432C>G | synonymous_variant | 0.35 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763813 | c.444C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 763835 | p.Ala156Met | missense_variant | 0.33 | rifampicin | |
rpoC | 763855 | c.486C>T | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.42 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.39 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763888 | c.519G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 763960 | c.591T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 763978 | c.609C>G | synonymous_variant | 0.35 | rifampicin | |
rpoC | 763991 | p.Ile208Leu | missense_variant | 0.37 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764011 | c.642T>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764024 | c.655_657delTTGinsCTC | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764059 | c.690G>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764161 | c.792G>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764188 | c.819A>G | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764194 | p.Glu275Asp | missense_variant | 0.36 | rifampicin | |
rpoC | 764203 | c.834G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764206 | c.837T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764215 | c.846A>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 764245 | c.876C>A | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764272 | c.903G>C | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764344 | c.975C>G | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764381 | c.1012_1013delTCinsAG | synonymous_variant | 0.28 | rifampicin | |
rpoC | 764387 | c.1018_1020delTTGinsCTC | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764410 | c.1041G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.28 | rifampicin | |
rpoC | 764585 | c.1216_1218delCTCinsTTG | synonymous_variant | 0.26 | rifampicin | |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764626 | c.1257C>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764644 | c.1275G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764695 | c.1326T>G | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764716 | c.1347G>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764830 | c.1461C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764893 | c.1524T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 764962 | c.1593G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 765150 | p.Gly594Glu | missense_variant | 1.0 | rifampicin | Not assoc w R |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.27 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 765583 | c.2214G>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.38 | rifampicin | |
rpoC | 765658 | c.2289C>T | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765739 | c.2370G>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.43 | rifampicin | |
rpoC | 765752 | p.Asp795Ser | missense_variant | 0.43 | rifampicin | |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.4 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.38 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.37 | rifampicin | |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 765947 | c.2578T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.22 | rifampicin | |
rpoC | 766054 | c.2685C>T | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766061 | p.Val898Leu | missense_variant | 0.23 | rifampicin | |
rpoC | 766081 | c.2712T>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.21 | rifampicin | |
rpoC | 766141 | c.2772C>T | synonymous_variant | 0.16 | rifampicin | |
rpoC | 766142 | c.2773C>T | synonymous_variant | 0.16 | rifampicin | Not assoc w R - Interim |
rpoC | 766456 | c.3087C>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766471 | c.3102G>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766486 | c.3117A>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766492 | c.3123T>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766522 | c.3153C>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766528 | c.3159T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 766530 | p.Arg1054Gln | missense_variant | 0.2 | rifampicin | |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 766582 | c.3213C>G | synonymous_variant | 0.17 | rifampicin | |
rpoC | 766583 | p.Gly1072Ser | missense_variant | 0.17 | rifampicin | |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.17 | rifampicin | |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.22 | rifampicin | |
rpoC | 766630 | c.3261G>T | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766633 | c.3264G>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 766645 | c.3276A>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766651 | c.3282T>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766666 | c.3297C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766750 | c.3381C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.25 | rifampicin | |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.18 | streptomycin | |
rpsL | 781658 | c.99A>G | synonymous_variant | 0.18 | streptomycin | |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781703 | c.144G>T | synonymous_variant | 0.23 | streptomycin | |
rpsL | 781706 | c.147T>G | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781718 | c.159C>G | synonymous_variant | 0.28 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.32 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781763 | c.204C>G | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781820 | c.261G>C | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781835 | c.276T>C | synonymous_variant | 0.3 | streptomycin | Not assoc w R - Interim |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.23 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.23 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.23 | streptomycin | |
rpsL | 781877 | c.318T>G | synonymous_variant | 0.24 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.21 | streptomycin | Uncertain significance |
rplC | 800582 | c.-227C>G | upstream_gene_variant | 0.21 | linezolid | |
rplC | 800591 | c.-218C>T | upstream_gene_variant | 0.19 | linezolid | |
rplC | 800600 | c.-209G>T | upstream_gene_variant | 0.19 | linezolid | |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.2 | linezolid | |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.21 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800738 | c.-71T>C | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.25 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800793 | c.-15_-11delAGATT | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800803 | c.-6A>C | upstream_gene_variant | 0.25 | linezolid | |
rplC | 800804 | c.-4delA | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800808 | c.-1delAinsGAACTC | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800815 | c.7C>A | synonymous_variant | 0.23 | linezolid | |
rplC | 800820 | c.12G>A | synonymous_variant | 0.23 | linezolid | |
rplC | 800829 | c.21C>G | synonymous_variant | 0.23 | linezolid | |
rplC | 800844 | c.36T>C | synonymous_variant | 0.22 | linezolid | |
rplC | 800856 | c.48A>G | synonymous_variant | 0.23 | linezolid | |
rplC | 800865 | c.57A>G | synonymous_variant | 0.21 | linezolid | |
rplC | 800867 | p.Ser20Asn | missense_variant | 0.21 | linezolid | |
rplC | 800872 | c.64_66delAGAinsCGG | synonymous_variant | 0.2 | linezolid | |
rplC | 800875 | p.Val23Ile | missense_variant | 0.19 | linezolid | |
rplC | 800880 | c.72A>C | synonymous_variant | 0.19 | linezolid | |
rplC | 800889 | c.81C>G | synonymous_variant | 0.2 | linezolid | |
rplC | 800901 | c.93C>G | synonymous_variant | 0.22 | linezolid | |
rplC | 800916 | c.108A>C | synonymous_variant | 0.2 | linezolid | |
fbiC | 1303812 | c.882C>T | synonymous_variant | 0.18 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303842 | c.912C>G | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303846 | p.Phe306Val | missense_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303851 | c.921C>G | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303854 | c.924T>C | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303855 | p.Ala309Thr | missense_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303860 | c.930A>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303869 | c.939T>C | synonymous_variant | 0.2 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1303881 | c.951G>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303887 | c.957G>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303897 | c.967C>T | synonymous_variant | 0.19 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1303905 | c.975G>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303908 | c.978C>G | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472094 | n.249T>A | non_coding_transcript_exon_variant | 0.2 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.19 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.21 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1474111 | n.454T>C | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1474112 | n.455T>A | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474376 | n.719T>C | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1474427 | n.770A>C | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1474717 | n.1060A>T | non_coding_transcript_exon_variant | 0.4 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474753 | n.1096A>G | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.31 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475202 | n.1545G>C | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.36 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.34 | capreomycin | |
linezolid | ||||||
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475387 | n.1730C>T | non_coding_transcript_exon_variant | 0.26 | capreomycin | |
linezolid | ||||||
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.28 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475436 | n.1779C>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1475504 | n.1847C>A | non_coding_transcript_exon_variant | 0.65 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1475603 | n.1946G>A | non_coding_transcript_exon_variant | 0.35 | capreomycin | |
linezolid | ||||||
rrl | 1475638 | n.1981C>T | non_coding_transcript_exon_variant | 0.3 | capreomycin | |
linezolid | ||||||
rrl | 1475642 | n.1985T>C | non_coding_transcript_exon_variant | 0.31 | capreomycin | |
linezolid | ||||||
rrl | 1475761 | n.2104_2106delCGCinsGT | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1475765 | n.2111delG | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.31 | capreomycin | |
linezolid | ||||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.25 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476033 | n.2376T>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476035 | n.2378G>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 0.45 | capreomycin | |
linezolid | ||||||
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 0.47 | capreomycin | |
linezolid | ||||||
rrl | 1476105 | n.2448_2449delGAinsT | non_coding_transcript_exon_variant | 0.47 | capreomycin | |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.49 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 0.49 | capreomycin | |
linezolid | ||||||
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.44 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.31 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
inhA | 1674331 | c.130C>T | synonymous_variant | 0.3 | isoniazid | |
ethionamide | ||||||
inhA | 1674342 | c.141T>C | synonymous_variant | 0.3 | isoniazid | |
ethionamide | ||||||
inhA | 1674352 | p.Thr51Ala | missense_variant | 0.29 | isoniazid | |
ethionamide | Uncertain significance | |||||
inhA | 1674368 | p.Ala56Glu | missense_variant | 0.3 | isoniazid | |
ethionamide | ||||||
inhA | 1674382 | p.Leu61Ile | missense_variant | 0.35 | isoniazid | |
ethionamide | ||||||
inhA | 1674703 | c.502T>C | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
inhA | 1674708 | c.507G>A | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
inhA | 1674718 | c.517A>C | synonymous_variant | 0.3 | isoniazid | |
ethionamide | ||||||
inhA | 1674726 | c.525G>C | synonymous_variant | 0.33 | isoniazid | |
ethionamide | ||||||
inhA | 1674729 | c.528G>C | synonymous_variant | 0.36 | isoniazid | |
ethionamide | ||||||
inhA | 1674750 | c.549T>G | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674759 | c.558G>C | synonymous_variant | 0.4 | isoniazid | |
ethionamide | ||||||
inhA | 1674771 | c.570C>G | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
inhA | 1674774 | c.573A>G | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
inhA | 1674780 | c.579T>C | synonymous_variant | 0.38 | isoniazid | |
ethionamide | ||||||
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1833664 | c.123C>G | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833754 | c.213G>A | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833805 | c.264C>T | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833808 | c.267G>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.37 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.35 | pyrazinamide | |
rpsA | 1833871 | c.330G>A | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833895 | c.354G>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833949 | c.408T>G | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834102 | c.561T>G | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.17 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.35 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.36 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.36 | pyrazinamide | |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834303 | c.762T>G | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.39 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.45 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834351 | c.810G>A | synonymous_variant | 0.45 | pyrazinamide | |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.47 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834375 | c.834G>A | synonymous_variant | 0.48 | pyrazinamide | |
rpsA | 1834378 | c.837T>C | synonymous_variant | 0.48 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834411 | c.870T>G | synonymous_variant | 0.53 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.49 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.46 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.46 | pyrazinamide | |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.46 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.44 | pyrazinamide | |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.41 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.48 | pyrazinamide | |
rpsA | 1834540 | c.999G>C | synonymous_variant | 0.43 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.4 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834690 | c.1149T>C | synonymous_variant | 0.24 | pyrazinamide | |
tsnR | 1853361 | c.-245T>C | upstream_gene_variant | 0.27 | linezolid | |
tsnR | 1853370 | c.-236_-234delGCAinsTCG | upstream_gene_variant | 0.26 | linezolid | |
tsnR | 1853387 | c.-219T>G | upstream_gene_variant | 0.25 | linezolid | |
tsnR | 1853394 | c.-212_-211delCTinsGC | upstream_gene_variant | 0.24 | linezolid | |
tsnR | 1853420 | c.-186T>G | upstream_gene_variant | 0.22 | linezolid | |
tsnR | 1853429 | c.-177G>T | upstream_gene_variant | 0.23 | linezolid | |
tsnR | 1853444 | c.-162C>G | upstream_gene_variant | 0.21 | linezolid | |
tsnR | 1853447 | c.-159C>G | upstream_gene_variant | 0.21 | linezolid | |
tsnR | 1853459 | c.-147G>C | upstream_gene_variant | 0.17 | linezolid | |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 | capreomycin | Not assoc w R |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
kasA | 2517974 | c.-141T>C | upstream_gene_variant | 0.17 | isoniazid | |
kasA | 2518076 | c.-39C>T | upstream_gene_variant | 0.85 | isoniazid | |
kasA | 2518444 | c.330T>C | synonymous_variant | 0.18 | isoniazid | |
kasA | 2518447 | c.333T>G | synonymous_variant | 0.18 | isoniazid | |
kasA | 2518459 | c.345T>G | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518462 | c.348A>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518468 | c.354A>C | synonymous_variant | 0.26 | isoniazid | |
kasA | 2518475 | c.361A>C | synonymous_variant | 0.29 | isoniazid | |
kasA | 2518480 | c.366T>C | synonymous_variant | 0.29 | isoniazid | |
kasA | 2518504 | c.390T>C | synonymous_variant | 0.35 | isoniazid | |
kasA | 2518506 | p.Ala131Glu | missense_variant | 0.36 | isoniazid | |
kasA | 2518513 | c.399C>G | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518519 | c.405G>C | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518528 | c.414C>G | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518534 | c.420G>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518561 | c.447T>C | synonymous_variant | 0.4 | isoniazid | |
kasA | 2518570 | c.456G>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518574 | p.Ile154Val | missense_variant | 0.42 | isoniazid | |
kasA | 2518579 | c.465T>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 0.43 | isoniazid | |
kasA | 2518594 | c.480C>G | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518597 | c.483C>G | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518609 | p.Met165Ile | missense_variant | 0.45 | isoniazid | |
kasA | 2518639 | c.525G>C | synonymous_variant | 0.43 | isoniazid | |
kasA | 2518657 | c.543G>C | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518663 | c.549T>C | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518678 | c.564C>T | synonymous_variant | 0.45 | isoniazid | |
kasA | 2518684 | c.570C>G | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.38 | isoniazid | |
kasA | 2518705 | c.591T>C | synonymous_variant | 0.42 | isoniazid | |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518714 | c.600A>C | synonymous_variant | 0.41 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.38 | isoniazid | |
Rv2477c | 2783542 | c.501G>C | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2680 | 2996034 | c.-71G>A | upstream_gene_variant | 0.23 | capreomycin | Uncertain significance |
Rv2752c | 3066075 | c.117A>G | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066081 | c.111G>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066087 | c.105A>G | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
Rv2752c | 3066114 | c.78A>G | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066118 | p.Asn25Ser | missense_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066150 | c.42C>T | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066228 | c.-37T>C | upstream_gene_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066237 | c.-46C>G | upstream_gene_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066260 | c.-69T>C | upstream_gene_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066264 | c.-73C>T | upstream_gene_variant | 0.27 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066276 | c.-85G>C | upstream_gene_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
thyA | 3073977 | c.495A>G | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyA | 3073980 | c.492C>T | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyA | 3073983 | c.489C>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyA | 3074010 | c.462C>G | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074053 | p.Arg140Gln | missense_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074056 | p.Glu139Pro | missense_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074061 | c.411A>G | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074064 | c.408C>G | synonymous_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3074076 | c.396C>G | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074097 | c.375C>G | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074100 | p.Asp124Asn | missense_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074103 | c.369C>G | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyA | 3074106 | c.366T>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyA | 3074121 | p.Asp117Glu | missense_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074130 | c.342G>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyA | 3074147 | p.Ile109Val | missense_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074154 | c.318T>C | synonymous_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3074165 | p.Ala103Thr | missense_variant | 0.16 | para-aminosalicylic_acid | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
lpqB | 3624166 | p.Met249Leu | missense_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624172 | p.Val247Ile | missense_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624173 | c.738A>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3624200 | c.711A>G | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624204 | p.Ser236Asn | missense_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624209 | c.702A>C | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624224 | c.687T>C | synonymous_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624233 | c.678G>A | synonymous_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624242 | c.669A>G | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624245 | c.666A>G | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624254 | c.657T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3624263 | c.648T>C | synonymous_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624266 | c.645T>C | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624269 | c.642G>C | synonymous_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624276 | p.Arg212His | missense_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624278 | c.633G>C | synonymous_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624290 | c.621C>G | synonymous_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624293 | c.618A>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3624299 | c.612G>C | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624304 | p.Leu203Met | missense_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624319 | p.Leu198Phe | missense_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624331 | c.580C>T | synonymous_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624335 | c.576C>T | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624339 | p.Arg191His | missense_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624341 | c.570C>T | synonymous_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624545 | c.366T>C | synonymous_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624556 | p.Val119Met | missense_variant | 0.22 | rifampicin | Uncertain significance |
bedaquiline | ||||||
lpqB | 3624557 | c.354T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3624563 | c.348C>A | synonymous_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624569 | c.342C>G | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624572 | c.339C>G | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624575 | c.336T>C | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624581 | c.330A>C | synonymous_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624594 | p.Val106Ala | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624603 | p.Lys103Arg | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624605 | c.306G>A | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624612 | p.Ser100Ala | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624614 | c.297A>T | synonymous_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624623 | c.288C>G | synonymous_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624646 | c.265T>C | synonymous_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624649 | c.262T>C | synonymous_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624656 | c.255C>T | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624659 | c.252C>G | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624680 | c.231T>G | synonymous_variant | 0.35 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624686 | p.Glu75Gln | missense_variant | 0.35 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624701 | c.210T>G | synonymous_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624704 | c.207G>C | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624707 | c.204G>C | synonymous_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624710 | c.201G>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3624722 | c.189C>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3624725 | c.186G>C | synonymous_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3624728 | c.183C>T | synonymous_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
lpqB | 3625141 | c.-231T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625147 | c.-237C>G | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625161 | c.-251T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625162 | c.1452T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3625180 | c.-270C>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625186 | c.-276T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625189 | c.1425A>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625195 | c.-285A>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625198 | c.-288C>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625201 | c.-291T>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625204 | p.Ser470Ala | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625207 | c.-297C>G | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625222 | c.1392T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625240 | c.-330T>C | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625243 | c.-333T>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625255 | c.-345T>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625262 | p.Tyr451Phe | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625267 | c.1347T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625270 | c.-360G>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625285 | c.-375G>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625291 | c.-381A>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625297 | c.-387C>G | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625301 | p.Ala438Gly | missense_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625313 | p.Arg434Gln | missense_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625321 | c.1293A>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3625336 | c.-426C>T | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625345 | c.-435T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625351 | c.1263T>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625354 | c.-444G>C | upstream_gene_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625357 | c.-447T>C | upstream_gene_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625381 | c.-471T>G | upstream_gene_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625384 | p.Ala410Thr | missense_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625387 | c.-477T>C | upstream_gene_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625396 | c.-486G>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625407 | p.Gln403Glu | missense_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625413 | p.Ala401Thr | missense_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625420 | c.-510T>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625423 | c.-513G>C | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625431 | c.-521T>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625438 | c.-528T>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625444 | p.Glu390Asp | missense_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625465 | c.-555T>C | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625471 | c.-561C>G | upstream_gene_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625478 | p.Asn379Ser | missense_variant | 0.33 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625480 | p.Asn378Gln | missense_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625483 | c.-573C>G | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625486 | c.-576G>C | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625489 | c.-579A>C | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625497 | c.1117T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625501 | c.-591C>G | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625510 | c.-600T>C | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625518 | c.-608T>C | upstream_gene_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625528 | c.-618G>T | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625531 | c.-621C>G | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625537 | c.-627T>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625540 | c.-630G>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625543 | c.-633G>C | upstream_gene_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625569 | c.1045T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625572 | p.Thr348Ser | missense_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625579 | c.-669A>G | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625585 | c.-675G>C | upstream_gene_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625588 | c.-678G>A | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625592 | p.Ser341Asn | missense_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625594 | c.-684T>C | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625602 | c.-692T>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625616 | p.Arg333Ala | missense_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625621 | c.-711G>C | upstream_gene_variant | 0.28 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625648 | c.-738T>C | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625654 | c.-746_-744delTTGinsCTC | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625675 | c.-765G>C | upstream_gene_variant | 0.29 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625687 | c.-777G>C | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625696 | c.-786A>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625747 | c.867G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625755 | p.Ala287Thr | missense_variant | 0.19 | rifampicin | Uncertain significance |
bedaquiline | ||||||
lpqB | 3625762 | c.-852A>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625792 | c.-882G>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625864 | c.-954T>G | upstream_gene_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625909 | c.-999T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625912 | c.702G>C | synonymous_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625915 | c.699G>C | synonymous_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626048 | p.Arg189Gln | missense_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626124 | p.Ala164Ser | missense_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626125 | c.489C>G | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626146 | c.468C>G | synonymous_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626157 | p.Ala153Ser | missense_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626170 | c.444T>C | synonymous_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626176 | c.438C>G | synonymous_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626179 | c.435A>T | synonymous_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626185 | c.429T>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626188 | p.Ser142Thr | missense_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626191 | c.423C>G | synonymous_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626194 | c.420T>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
mtrB | 3626206 | c.408T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
mtrB | 3626209 | c.405T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
mtrB | 3626212 | c.402G>C | synonymous_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626218 | p.Met132Ile | missense_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626230 | c.384T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626239 | c.375T>C | synonymous_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626840 | c.-227C>G | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626846 | c.504G>A | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626858 | c.-245A>G | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626866 | c.-253T>C | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626890 | c.-277T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626891 | c.-278G>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627181 | c.-568T>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627182 | c.-569T>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627191 | c.-578G>A | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627196 | c.-583C>T | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627197 | c.-584T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627209 | c.-596G>A | upstream_gene_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627221 | c.129C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627242 | c.108C>T | synonymous_variant | 0.16 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627263 | c.-650C>T | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627272 | c.-659G>T | upstream_gene_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
rpoA | 3877656 | c.852T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3877773 | c.735G>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3877803 | c.705G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877848 | c.660C>G | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3877875 | c.633T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoA | 3877934 | c.574C>T | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoA | 3877968 | c.540C>G | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3877974 | c.534G>C | synonymous_variant | 0.2 | rifampicin | |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoA | 3878019 | c.489A>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878022 | c.486T>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878031 | c.477T>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878040 | c.468T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3878043 | c.465G>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878046 | c.462T>A | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878067 | c.441C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878073 | c.435C>T | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878082 | c.426T>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.36 | rifampicin | |
rpoA | 3878142 | p.Gly122Glu | missense_variant | 0.36 | rifampicin | |
rpoA | 3878157 | c.351C>G | synonymous_variant | 0.36 | rifampicin | |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3878169 | c.339G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3878184 | c.324C>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878197 | p.Glu104Ala | missense_variant | 0.37 | rifampicin | Uncertain significance |
rpoA | 3878199 | c.309T>C | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878205 | c.303T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3878264 | p.Ser82Gly | missense_variant | 0.45 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoA | 3878284 | p.Glu75Ala | missense_variant | 0.4 | rifampicin | |
rpoA | 3878292 | c.216T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878298 | c.210A>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3878301 | c.207C>G | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoA | 3878309 | p.Pro67Ala | missense_variant | 0.39 | rifampicin | |
rpoA | 3878310 | c.198G>C | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoA | 3878334 | c.174T>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.44 | rifampicin | |
rpoA | 3878364 | c.144A>C | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878367 | c.141C>G | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878370 | c.138T>C | synonymous_variant | 0.38 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3878388 | c.120C>G | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3878391 | c.117T>C | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3878415 | c.93C>T | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3878424 | c.84G>C | synonymous_variant | 0.43 | rifampicin | |
rpoA | 3878430 | c.78G>C | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3878433 | c.75G>C | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3878436 | c.72A>G | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3878442 | c.66G>C | synonymous_variant | 0.41 | rifampicin | |
rpoA | 3878454 | c.54A>C | synonymous_variant | 0.42 | rifampicin | |
rpoA | 3878472 | p.Asp12Glu | missense_variant | 0.39 | rifampicin | |
rpoA | 3878478 | c.30C>G | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3878853 | c.-346G>A | upstream_gene_variant | 0.24 | rifampicin | |
rpoA | 3878878 | c.-371T>C | upstream_gene_variant | 0.26 | rifampicin | Uncertain significance |
rpoA | 3878884 | c.-377C>G | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3878909 | c.-402A>G | upstream_gene_variant | 0.31 | rifampicin | |
rpoA | 3878914 | c.-407T>C | upstream_gene_variant | 0.32 | rifampicin | Uncertain significance |
rpoA | 3878917 | c.-410G>C | upstream_gene_variant | 0.36 | rifampicin | |
rpoA | 3878938 | c.-431T>C | upstream_gene_variant | 0.39 | rifampicin | |
rpoA | 3878950 | c.-443C>G | upstream_gene_variant | 0.42 | rifampicin | |
rpoA | 3878956 | c.-449G>C | upstream_gene_variant | 0.44 | rifampicin | |
rpoA | 3878959 | c.-452G>C | upstream_gene_variant | 0.44 | rifampicin | |
rpoA | 3878968 | c.-461T>C | upstream_gene_variant | 0.44 | rifampicin | Uncertain significance |
rpoA | 3878976 | c.-469A>G | upstream_gene_variant | 0.4 | rifampicin | Uncertain significance |
rpoA | 3878989 | c.-482G>C | upstream_gene_variant | 0.37 | rifampicin | |
rpoA | 3878998 | c.-491C>G | upstream_gene_variant | 0.35 | rifampicin | Uncertain significance |
rpoA | 3879004 | c.-499_-497delAAGinsCGC | upstream_gene_variant | 0.36 | rifampicin | |
rpoA | 3879016 | c.-509A>G | upstream_gene_variant | 0.38 | rifampicin | |
rpoA | 3879022 | c.-515G>C | upstream_gene_variant | 0.37 | rifampicin | |
rpoA | 3879037 | c.-530G>C | upstream_gene_variant | 0.33 | rifampicin | |
rpoA | 3879079 | c.-572A>C | upstream_gene_variant | 0.28 | rifampicin | |
rpoA | 3879088 | c.-581A>C | upstream_gene_variant | 0.3 | rifampicin | |
rpoA | 3879094 | c.-587T>C | upstream_gene_variant | 0.29 | rifampicin | |
rpoA | 3879115 | c.-608G>A | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3879121 | c.-614T>G | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3879127 | c.-620T>C | upstream_gene_variant | 0.25 | rifampicin | |
rpoA | 3879136 | c.-629A>G | upstream_gene_variant | 0.25 | rifampicin | |
ddn | 3986633 | c.-211C>G | upstream_gene_variant | 0.2 | pretomanid | |
delamanid | ||||||
ddn | 3986636 | c.-208C>G | upstream_gene_variant | 0.19 | pretomanid | |
delamanid | ||||||
ddn | 3986648 | c.-196C>G | upstream_gene_variant | 0.18 | pretomanid | |
delamanid | ||||||
ddn | 3986665 | c.-179G>C | upstream_gene_variant | 0.16 | pretomanid | |
delamanid | ||||||
clpC1 | 4038347 | c.2358G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038398 | c.2307G>T | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 0.24 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038433 | c.2272C>T | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.35 | pyrazinamide | |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4038456 | p.Val750Glu | missense_variant | 0.33 | pyrazinamide | |
clpC1 | 4038460 | p.Leu749Met | missense_variant | 0.31 | pyrazinamide | |
clpC1 | 4038461 | c.2244G>T | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4038474 | p.Ser744Ala | missense_variant | 0.27 | pyrazinamide | |
clpC1 | 4038486 | p.Gly740Asn | missense_variant | 0.27 | pyrazinamide | |
clpC1 | 4038489 | p.Ala739Gly | missense_variant | 0.26 | pyrazinamide | |
clpC1 | 4038498 | p.Ser736Thr | missense_variant | 0.29 | pyrazinamide | |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.35 | pyrazinamide | |
clpC1 | 4038533 | p.Arg724Lys | missense_variant | 0.35 | pyrazinamide | |
clpC1 | 4038596 | c.2109A>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 0.27 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 0.26 | pyrazinamide | |
clpC1 | 4038661 | p.Ser682Thr | missense_variant | 0.27 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038790 | c.1915C>T | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038860 | c.1845G>A | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039043 | c.1662G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039090 | c.1615C>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039118 | c.1587C>G | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4039133 | c.1572C>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039274 | c.1431G>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039409 | c.1296T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4039412 | c.1293T>G | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4039415 | p.Glu430Asp | missense_variant | 0.19 | pyrazinamide | Uncertain significance |
clpC1 | 4039430 | c.1275T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039481 | c.1224T>G | synonymous_variant | 0.25 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039517 | c.1188C>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039532 | c.1173C>T | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039541 | c.1164C>G | synonymous_variant | 0.37 | pyrazinamide | |
clpC1 | 4039556 | c.1149G>C | synonymous_variant | 0.4 | pyrazinamide | |
clpC1 | 4039570 | p.Met379Leu | missense_variant | 0.41 | pyrazinamide | Uncertain significance |
clpC1 | 4039582 | p.Thr375Ser | missense_variant | 0.4 | pyrazinamide | |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 0.4 | pyrazinamide | |
clpC1 | 4039622 | c.1083C>G | synonymous_variant | 0.41 | pyrazinamide | |
clpC1 | 4039661 | c.1044T>G | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039996 | p.Glu237Gln | missense_variant | 0.22 | pyrazinamide | |
clpC1 | 4040009 | c.696C>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040090 | c.613_615delTCTinsAGC | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040108 | c.597G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040129 | c.576C>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4040144 | c.561G>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4040147 | c.558A>G | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040162 | c.543G>C | synonymous_variant | 0.29 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040165 | c.540G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4040171 | c.534C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040180 | c.525C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040201 | c.504C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040207 | c.498T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040213 | c.492T>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040228 | c.477G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040231 | c.474C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040234 | c.471C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040240 | c.465C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040249 | c.456A>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 0.28 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040423 | c.282A>G | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040431 | c.274T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040441 | c.264C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040450 | c.255A>G | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040459 | c.246C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040462 | c.243C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040465 | c.240T>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040480 | c.225T>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040528 | c.177G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040531 | c.174T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040534 | c.171A>G | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040537 | c.168G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040546 | c.159G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040551 | c.154T>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040561 | c.144A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040567 | c.138C>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040570 | c.135C>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040573 | c.132T>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040594 | c.111G>T | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4040597 | c.108C>T | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4040600 | c.105A>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040603 | c.102T>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040606 | c.99T>C | synonymous_variant | 0.2 | pyrazinamide | |
panD | 4044725 | c.-444C>T | upstream_gene_variant | 0.22 | pyrazinamide | |
panD | 4044737 | c.-456T>G | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044755 | c.-474G>C | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044779 | c.-500_-498delCTAinsTGC | upstream_gene_variant | 0.22 | pyrazinamide | |
panD | 4044785 | c.-504C>G | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044788 | c.-507G>C | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044791 | c.-510G>C | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044806 | c.-525T>C | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044812 | c.-531A>G | upstream_gene_variant | 0.25 | pyrazinamide | |
panD | 4044815 | c.-534G>A | upstream_gene_variant | 0.25 | pyrazinamide | |
panD | 4044821 | c.-540C>T | upstream_gene_variant | 0.28 | pyrazinamide | |
panD | 4044833 | c.-552A>C | upstream_gene_variant | 0.28 | pyrazinamide | |
panD | 4044839 | c.-558C>G | upstream_gene_variant | 0.3 | pyrazinamide | |
panD | 4044844 | c.-563T>C | upstream_gene_variant | 0.31 | pyrazinamide | |
panD | 4044854 | c.-573A>G | upstream_gene_variant | 0.29 | pyrazinamide | |
panD | 4044872 | c.-591C>T | upstream_gene_variant | 0.3 | pyrazinamide | |
panD | 4044881 | c.-600T>C | upstream_gene_variant | 0.26 | pyrazinamide | |
panD | 4044893 | c.-614_-612delACCinsGCG | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044896 | c.-615T>G | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044904 | c.-623A>G | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044908 | c.-628_-627delCTinsTG | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044917 | c.-636G>C | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044929 | c.-648G>C | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044935 | c.-655_-654delAAinsTG | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044943 | c.-662C>G | upstream_gene_variant | 0.18 | pyrazinamide | |
panD | 4044954 | c.-673C>T | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044959 | c.-678C>G | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044965 | c.-684T>C | upstream_gene_variant | 0.18 | pyrazinamide | |
glpK | 4138606 | c.1150T>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138610 | c.1146C>G | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138634 | c.1122G>A | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
glpK | 4138670 | c.1086G>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138681 | p.Met359Val | missense_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138696 | p.Pro354Ala | missense_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138703 | c.1053C>T | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138706 | c.1050C>G | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138714 | p.Ala348Ser | missense_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138718 | c.1038T>C | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4138724 | c.1032A>G | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
embC | 4239076 | c.-787C>T | upstream_gene_variant | 0.21 | ethambutol | |
embC | 4239298 | c.-565C>T | upstream_gene_variant | 1.0 | ethambutol | Not assoc w R |
embC | 4240495 | c.633T>C | synonymous_variant | 0.17 | ethambutol | |
embC | 4240514 | p.Val218Met | missense_variant | 0.17 | ethambutol | |
embC | 4240543 | c.681G>C | synonymous_variant | 0.19 | ethambutol | |
embC | 4240545 | p.Pro228Gln | missense_variant | 0.19 | ethambutol | |
embC | 4240558 | c.696C>G | synonymous_variant | 0.21 | ethambutol | |
embC | 4240561 | c.699C>G | synonymous_variant | 0.21 | ethambutol | |
embC | 4240576 | c.714A>G | synonymous_variant | 0.23 | ethambutol | |
embC | 4240578 | p.Ala239Val | missense_variant | 0.22 | ethambutol | |
embC | 4240587 | p.Gly242Ala | missense_variant | 0.22 | ethambutol | |
embC | 4240598 | p.Val246Ile | missense_variant | 0.22 | ethambutol | |
embC | 4240610 | p.Ile250Leu | missense_variant | 0.26 | ethambutol | |
embC | 4240615 | c.753G>C | synonymous_variant | 0.26 | ethambutol | |
embC | 4240632 | p.Met257Thr | missense_variant | 0.21 | ethambutol | |
embC | 4240645 | c.783G>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4240654 | c.792C>G | synonymous_variant | 0.21 | ethambutol | Not assoc w R - Interim |
embC | 4240655 | p.Ala265Ser | missense_variant | 0.21 | ethambutol | |
embC | 4240670 | p.Thr270Leu | missense_variant | 0.2 | ethambutol | |
embC | 4240673 | p.Gly271Ser | missense_variant | 0.2 | ethambutol | |
embC | 4240678 | c.816T>G | synonymous_variant | 0.2 | ethambutol | |
embC | 4240685 | p.Thr275Ala | missense_variant | 0.21 | ethambutol | |
embC | 4240693 | c.831T>C | synonymous_variant | 0.19 | ethambutol | |
embC | 4240694 | p.Ile278Val | missense_variant | 0.19 | ethambutol | |
embC | 4240729 | c.867C>G | synonymous_variant | 0.18 | ethambutol | |
embC | 4240735 | c.873C>G | synonymous_variant | 0.2 | ethambutol | |
embC | 4240822 | c.960C>G | synonymous_variant | 0.19 | ethambutol | |
embC | 4240831 | c.969T>G | synonymous_variant | 0.2 | ethambutol | |
embC | 4240867 | c.1005T>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4240870 | c.1008T>C | synonymous_variant | 0.33 | ethambutol | |
embC | 4240885 | c.1023T>C | synonymous_variant | 0.33 | ethambutol | |
embC | 4240897 | c.1035C>G | synonymous_variant | 0.35 | ethambutol | Not assoc w R |
embC | 4240898 | c.1036_1038delCTAinsTTG | synonymous_variant | 0.35 | ethambutol | |
embC | 4240911 | p.Ala350Val | missense_variant | 0.31 | ethambutol | |
embC | 4240924 | c.1062C>G | synonymous_variant | 0.33 | ethambutol | |
embC | 4240936 | c.1074A>G | synonymous_variant | 0.33 | ethambutol | |
embC | 4240945 | c.1083T>C | synonymous_variant | 0.33 | ethambutol | |
embC | 4240951 | c.1089C>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4240954 | p.Ile364Met | missense_variant | 0.29 | ethambutol | |
embC | 4240957 | c.1095C>G | synonymous_variant | 0.28 | ethambutol | |
embC | 4240960 | c.1098G>C | synonymous_variant | 0.3 | ethambutol | |
embC | 4240978 | c.1116G>A | synonymous_variant | 0.24 | ethambutol | Not assoc w R - Interim |
embC | 4240979 | p.Thr373Gln | missense_variant | 0.24 | ethambutol | |
embC | 4240983 | p.Ser374Asn | missense_variant | 0.24 | ethambutol | |
embC | 4240987 | c.1125G>C | synonymous_variant | 0.24 | ethambutol | |
embC | 4240989 | p.Ala376Gly | missense_variant | 0.23 | ethambutol | |
embC | 4241005 | c.1143G>C | synonymous_variant | 0.26 | ethambutol | |
embC | 4241008 | c.1146G>C | synonymous_variant | 0.26 | ethambutol | |
embC | 4241011 | c.1149C>A | synonymous_variant | 0.27 | ethambutol | |
embC | 4241017 | c.1155T>C | synonymous_variant | 0.26 | ethambutol | |
embC | 4241023 | c.1161T>C | synonymous_variant | 0.27 | ethambutol | |
embC | 4241026 | c.1164C>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4241038 | c.1176G>C | synonymous_variant | 0.28 | ethambutol | |
embC | 4241039 | p.Asp393Asn | missense_variant | 0.28 | ethambutol | |
embC | 4241047 | c.1185C>G | synonymous_variant | 0.28 | ethambutol | |
embC | 4241050 | c.1188T>G | synonymous_variant | 0.29 | ethambutol | |
embC | 4241071 | c.1209C>G | synonymous_variant | 0.26 | ethambutol | |
embC | 4241074 | c.1212G>C | synonymous_variant | 0.24 | ethambutol | |
embC | 4241104 | c.1242G>A | synonymous_variant | 0.22 | ethambutol | Not assoc w R - Interim |
embC | 4241107 | c.1245G>C | synonymous_variant | 0.24 | ethambutol | |
embC | 4241116 | c.1254C>G | synonymous_variant | 0.24 | ethambutol | |
embC | 4241140 | c.1278A>G | synonymous_variant | 0.24 | ethambutol | Not assoc w R - Interim |
embC | 4241141 | p.Ile427Ala | missense_variant | 0.24 | ethambutol | |
embC | 4241158 | c.1296T>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4241161 | c.1299C>G | synonymous_variant | 0.19 | ethambutol | Not assoc w R - Interim |
embC | 4241162 | c.1300T>C | synonymous_variant | 0.2 | ethambutol | |
embC | 4242643 | c.2781C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embC | 4242803 | p.Val981Leu | missense_variant | 0.9 | ethambutol | Not assoc w R |
embA | 4245674 | c.2442A>C | synonymous_variant | 0.19 | ethambutol | Not assoc w R - Interim |
embB | 4249339 | c.2826T>C | synonymous_variant | 0.27 | ethambutol | |
embB | 4249351 | c.2838C>G | synonymous_variant | 0.29 | ethambutol | |
embB | 4249360 | c.2847G>C | synonymous_variant | 0.32 | ethambutol | |
embB | 4249369 | c.2856T>C | synonymous_variant | 0.33 | ethambutol | |
embB | 4249375 | c.2862G>C | synonymous_variant | 0.32 | ethambutol | |
embB | 4249381 | c.2868A>G | synonymous_variant | 0.32 | ethambutol | |
embB | 4249387 | p.Glu958Asp | missense_variant | 0.32 | ethambutol | |
embB | 4249394 | p.Ile961Val | missense_variant | 0.32 | ethambutol | |
embB | 4249399 | c.2886G>C | synonymous_variant | 0.3 | ethambutol | |
embB | 4249400 | p.Val963Leu | missense_variant | 0.3 | ethambutol | |
embB | 4249411 | c.2898G>C | synonymous_variant | 0.26 | ethambutol | |
embB | 4249414 | c.2901G>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4249417 | c.2904A>G | synonymous_variant | 0.25 | ethambutol | |
embB | 4249423 | p.Asp970Glu | missense_variant | 0.27 | ethambutol | Uncertain significance |
embB | 4249432 | c.2919A>G | synonymous_variant | 0.27 | ethambutol | |
embB | 4249441 | c.2928A>G | synonymous_variant | 0.21 | ethambutol | Not assoc w R - Interim |
embB | 4249465 | c.2952G>C | synonymous_variant | 0.19 | ethambutol | |
embB | 4249469 | p.Leu986Met | missense_variant | 0.18 | ethambutol | |
embB | 4249486 | c.2973T>G | synonymous_variant | 0.19 | ethambutol | |
embB | 4249487 | c.2974T>C | synonymous_variant | 0.19 | ethambutol | |
embB | 4249492 | c.2979C>A | synonymous_variant | 0.19 | ethambutol | |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 | kanamycin | Not assoc w R |
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
whiB6 | 4338732 | c.-211C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin |